Citrus Sinensis ID: 016047

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390------
Protein Sequence
MSWWWAGAIGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEEEEccccHHHHHHHHHcccccccccccEEEEEcccccccccccccEEEEEcccccHHHHHHHHccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHccHHHHHHHHHHccccccccccccccEEEEEEcccccccccHHHHHHcccccccccHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHcccccccccccccEEEEEEcccHHHHHHHHHHHcccccccccEEEEEEcccccccccccccEEEEEEcccHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccEEEcccHHHccccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEEcccEEEEcccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccHHHHHHHHHHHHccHHHHcccEEccccccEcHHHHHHHHHHHHccccccccccccccccccccccHHHHHHccHHHHHHHHHHcccccccHHHHHcccHHccccccccEEccHHHHHHcccccccccHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MSWWWAGAIGAArkfeedeparsyQSVALIVGVTGivgnslaeilplpdtpggpwkvygvarrpkpnwnadhlveyvqcdvsdpeetqAKLSQLTDVTHIFYVTWtnrsteaenckingSMFRNVLRAvipnapnlrhVCLQtgtkhylgpfeafgkikpydppftedmprldapnfyytLEDILFEEVEKKEElswsvhrpdtifgfspYSLMNLVGALCVYAAVckhegiplrfpgtkaaWECYSIASDADLIAEHQIWaavdpyakneafncnngdvfKWKHLWKVLAEQFgiedyglseeeeeggggtqRVKLAEFMKGKEGVWEEIVRenqlqptrldevGAWWFVDLVLTGEAKLASMnkskehgfsgfrnsknsfITWIdkvkgfkivp
Flexible Loop (DISEMBL)
MSWWWAGAIGAArkfeedepaRSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAklsqltdvTHIFYVTWtnrsteaenckiNGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDyglseeeeeggggtqrVKLAEFMKGKEGVWEEIVREnqlqptrldeVGAWWFVDLVLTGEAKLASMNkskehgfsgfrnsknsfitwidkvkgfkivp
Low Complexity Region (SEG)
MSWWWAGAIGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFgiedyglseeeeeggggTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Disordered region (IsUnstruct)
**WWWAGAIGAARKFEE**PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD****QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY*******************EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKL************GFRNSKNSFITWIDKVKGFKI**
Disordered Region (DISOPRED)
MSWWWAGA********************LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Disordered Region (DISEMBL)
MSWWWAGAIGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGL***********QRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Disordered Region (DISPRO)
*SWWWAGAIGAARKF****PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSWWWAGAIGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	396	2.2.26 [Sep-21-2011]
Q9STX2	388	3-oxo-Delta(4,5)-steroid	yes	no	0.977	0.997	0.727	1e-175
Q6PQJ9	389	3-oxo-Delta(4,5)-steroid	N/A	no	0.979	0.997	0.717	1e-168
O74913	405	Uncharacterized protein C	yes	no	0.906	0.886	0.262	1e-30

>sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana GN=VEP1 PE=1 SV=1

 Score =  614 bits (1584), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 289/397 (72%), Positives = 334/397 (84%), Gaps = 10/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWWWAGAIGAA+K  +EDEP++S++SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKLDEDEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARRP+P WNADH ++Y+QCDVSD E+T++KLS LTDVTH+FYVTWTNR +E+ENC+ NG
Sbjct: 61  VARRPRPTWNADHPIDYIQCDVSDAEDTRSKLSPLTDVTHVFYVTWTNRESESENCEANG 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
           SM RNVL+A+IP APNLRHVCLQTGTKHYLGPF      + +DPPFTEDMPRL   NFYY
Sbjct: 121 SMLRNVLQAIIPYAPNLRHVCLQTGTKHYLGPFTNVDGPR-HDPPFTEDMPRLQIQNFYY 179

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           T EDILFEE++K E ++WS+HRP+ IFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+
Sbjct: 180 TQEDILFEEIKKIETVTWSIHRPNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGS 239

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           K AWE +  ASDADLIAE QIWAAVDPYAKNEAFNCNN D+FKWKHLWK+LAEQFGIE+Y
Sbjct: 240 KKAWEGFMTASDADLIAEQQIWAAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEY 299

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
           G  E +  G        L E MKGKE VWEE+V+ENQLQ  +L+EVG WWF D++L  E 
Sbjct: 300 GFEEGKNLG--------LVEMMKGKERVWEEMVKENQLQEKKLEEVGVWWFADVILGVEG 351

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
            + SMNKSKE+GF GFRNS NSFI+WIDK K FKIVP
Sbjct: 352 MIDSMNKSKEYGFLGFRNSNNSFISWIDKYKAFKIVP 388

Involved in vascular strand development. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 21-acetyl cortexone, 2-cyclohexenone, but-1-en-3-one, ethyl acrylate, ethylmethacrylate, cortisone and canarigenone as substrates, lower activity with 3-methyl-2-cyclohexenone and 3,5,5-trimethyl-2-cyclohexenone as substrate, and no activity with canarigenin, canarigenin digitoxoside and pregnenolone. May be involved in the formation of 5-beta phytoecdysteroids.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3

>sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1 SV=1

 Score =  591 bits (1524), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 285/397 (71%), Positives = 324/397 (81%), Gaps = 9/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWWWAGAIGAA+K  EED+    + SVALIVGVTGI+GNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKRLEEDDAQPKHSSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARR +P W+ D+ + YVQCD+SDP+++QAKLS LTDVTH+FYVTW NRSTE ENC+ N 
Sbjct: 61  VARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANS 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
            MFRNVL AVIPN PNL+H+ LQTG KHY+GPFE++GKI+ +DPP+TED+PRL   NFYY
Sbjct: 121 KMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY 180

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
            LEDI+ EEVEKKE L+WSVHRP  IFGFSPYS+MNLVG LCVYAA+CKHEG  LRF G 
Sbjct: 181 DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGC 240

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           KAAW+ YS  SDADLIAEH IWAAVDPYAKNEAFN +NGDVFKWKH WKVLAEQFG+   
Sbjct: 241 KAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV--- 297

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
           G  E EE        +KL + MKGKE VWEEIVREN L PT+L +VG WWF D++L  E 
Sbjct: 298 GCGEYEE-----GVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNEC 352

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
            L SMNKSKEHGF GFRNSKN+FI+WIDK K +KIVP
Sbjct: 353 FLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 389

Involved in cardenolide biosynthesis. Catalyzes the stereospecific conversion of progesterone to 5-beta-pregnane-3,20-dione. Can use progesterone, testosterone, 4-androstene-3,17-dione, cortisol and cortisone as substrates, but not pregnenolone, 21-OH-pregnenolone or isoprogesterone. NADPH could not be replaced by NADH.

Digitalis lanata (taxid: 49450)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

>sp|O74913|YJ72_SCHPO Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.02c PE=4 SV=1

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 185/408 (45%), Gaps = 49/408 (12%)

Query: 27  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE 86
           VA++ G TG+ G ++ + L   D       +    +   P     H ++ +     +P++
Sbjct: 7   VAIVTGATGLNGAAIIKRLSEDDNCKTIHCISRSLKDEYPRKIKHHSIDLLN---EEPKD 63

Query: 87  TQAKLSQ--LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAV-IPNAPNLRHVCLQT 143
              K S   +  + + ++  +   + E + C++NG+M RN ++A+ + +   LR V L T
Sbjct: 64  IAKKFSLEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVILTT 123

Query: 144 GTKHYLGPFEAFGKIKPYDPPFTEDMPRL-----DAPNFYYTLEDILFEEVEKKEELSWS 198
           G K Y       G+++    P  E   R+       PNFYY  EDIL +E    ++  ++
Sbjct: 124 GLKFY---GLHLGEVRL---PMIETDIRVPETFSGTPNFYYVQEDIL-KEFSNGKKWDYT 176

Query: 199 VHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 258
           +  P+ I G S  S MN    + +YA VC+    P RFPG +  +  +   S + LIA+ 
Sbjct: 177 IAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIADF 236

Query: 259 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE--------DYGLSEE------ 304
           Q+W         E FN  NGD+  W   W  +AE FG+E        D+ LS E      
Sbjct: 237 QLWMTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYFGVEVPKNQFATDFTLSTEVTLSTP 296

Query: 305 ------EEEGG-------GGTQRVKLAEFMKGK--EGVWEEIVRENQLQPTRLDEVGAWW 349
                 E+E G           ++ L +++K K  +  W  I    +L    L EVG W 
Sbjct: 297 SPINLYEKELGIKHTPNSKIINQISLQQWVKQKKVQDAWRTIAEREKLNAHAL-EVGTWA 355

Query: 350 FVDLVLTGEAK-LASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
           F D +       ++SM+K+++ G++ + ++ + F    D++K  K +P
Sbjct: 356 FCDFLFGRTYNVISSMSKARKLGYTDYYDTFDGFKETFDELKKQKQIP 403

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	396
255538116	390	conserved hypothetical protein [Ricinus	0.982	0.997	0.788	0.0
356514451	388	PREDICTED: uncharacterized protein C757.	0.977	0.997	0.760	0.0
358348859	390	Progesterone 5-beta-reductase [Medicago	0.982	0.997	0.743	1e-179
374085803	389	putative progesterone 5-beta-reductase [	0.979	0.997	0.738	1e-178
358345490	809	Progesterone 5-beta-reductase [Medicago	0.977	0.478	0.741	1e-178
226235456	389	progesterone 5beta reductase-A [Nicotian	0.979	0.997	0.730	1e-176
393757452	389	putative progesterone 5-beta-reductase [	0.979	0.997	0.727	1e-175
225458782	390	PREDICTED: uncharacterized protein C757.	0.982	0.997	0.727	1e-175
226235458	388	progesterone 5beta reductase-B [Nicotian	0.977	0.997	0.732	1e-175
145333900	387	WcaG domain-containing protein [Arabidop	0.977	1.0	0.729	1e-175

>gi|255538116|ref|XP_002510123.1| conserved hypothetical protein [Ricinus communis] gi|223550824|gb|EEF52310.1| conserved hypothetical protein [Ricinus communis]

 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/397 (78%), Positives = 352/397 (88%), Gaps = 8/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWWWAGAIGAA+K  EED+  RS+QSVAL++GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKQEEDDAPRSFQSVALVLGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARRP+P WNADH VEY+QCD+SD  ETQ+KLSQLTD+THIFYVTWTNR +E ENC+ING
Sbjct: 61  VARRPRPTWNADHPVEYIQCDISDSAETQSKLSQLTDITHIFYVTWTNRQSEDENCEING 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
            MFRNVL+AVIPNAPNLRH+CLQTG KHY+GPFE+ GKI+ +DPPFTED+PRLDAPNFYY
Sbjct: 121 LMFRNVLQAVIPNAPNLRHICLQTGAKHYVGPFESLGKIQTHDPPFTEDLPRLDAPNFYY 180

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           TLEDI+FEEV KKE L+WS+HRPD IFGFSPYSLMN++G LCVYA +CKHEG+PL FPGT
Sbjct: 181 TLEDIMFEEVAKKEGLTWSIHRPDQIFGFSPYSLMNIIGTLCVYATICKHEGLPLLFPGT 240

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           KAAW CYS+ASDADLIAEHQIWA+VDPYAK+EAFNCNNGDVFKWKH WKVLAEQFGIE+Y
Sbjct: 241 KAAWNCYSVASDADLIAEHQIWASVDPYAKDEAFNCNNGDVFKWKHFWKVLAEQFGIEEY 300

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
           G  E       G +R+ L E MKGKE VWEEIV ENQLQPT+LDEV  WWFVDL+L GEA
Sbjct: 301 GFEE-------GEKRLSLVEMMKGKEAVWEEIVSENQLQPTKLDEVAVWWFVDLMLGGEA 353

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
            ++SMNKSKEHGF GFRNSKNSF +WIDK+K +KIVP
Sbjct: 354 VISSMNKSKEHGFLGFRNSKNSFASWIDKMKAYKIVP 390

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514451|ref|XP_003525919.1| PREDICTED: uncharacterized protein C757.02c-like [Glycine max]

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/397 (76%), Positives = 341/397 (85%), Gaps = 10/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWWWAGAIGAA+K FEE+EP RS+QSV L++GVTGIVGNSLAEILPL DTP GPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKFEEEEPPRSFQSVGLVIGVTGIVGNSLAEILPLADTPAGPWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARRP+P WNADH VEY+QCDVSDP + +AKLS LTDVTH+F+V+WTNRSTEAENC++NG
Sbjct: 61  VARRPRPPWNADHPVEYIQCDVSDPADAEAKLSALTDVTHVFFVSWTNRSTEAENCEVNG 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
           +M +NVLRAVIPNAPNLRHV LQTG KHY+GPFE  GKI+ ++PPF EDMPRLDAPNFYY
Sbjct: 121 AMLQNVLRAVIPNAPNLRHVSLQTGGKHYIGPFEFIGKIESHEPPFAEDMPRLDAPNFYY 180

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           T EDILFEE  KKE L+WSVHRP  IFGFSPYSLMN++G L VYAA+CKHEG+PLRFPGT
Sbjct: 181 TQEDILFEETAKKEGLTWSVHRPQVIFGFSPYSLMNMIGTLSVYAAICKHEGVPLRFPGT 240

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           + AWE YS ASDADLIAE  IWAAVDPYA+NEAFNC+NGDVF+WKHLWKVLAEQFGIE+Y
Sbjct: 241 RGAWESYSCASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFRWKHLWKVLAEQFGIEEY 300

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
           G    EEEG      + L+E MK K  VW+EIV ENQL PT+LDEV  WWFVDL+ +GE 
Sbjct: 301 GF---EEEG------LSLSELMKDKGPVWDEIVSENQLLPTKLDEVADWWFVDLIFSGEG 351

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
            L SMNK+KEHGF GFRNSKNSFI+WIDK K +KIVP
Sbjct: 352 MLDSMNKAKEHGFLGFRNSKNSFISWIDKTKAYKIVP 388

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358348859|ref|XP_003638459.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|355504394|gb|AES85597.1| Progesterone 5-beta-reductase [Medicago truncatula]

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 295/397 (74%), Positives = 339/397 (85%), Gaps = 8/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWWW+GAIGAA+K F+EDE   ++QSV LI+GVTGIVGNSLAEILPL DTPGG WKVYG
Sbjct: 1   MSWWWSGAIGAAKKKFDEDEAPPTFQSVGLIIGVTGIVGNSLAEILPLADTPGGRWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARRP+P+WNADH +EY+QCD++DP ETQ KLS LTDVTHIFYV+W+NR +EAENC++N 
Sbjct: 61  VARRPRPSWNADHPIEYIQCDITDPNETQTKLSVLTDVTHIFYVSWSNRPSEAENCEVNS 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
           +M RNVL AVIPNAPNLRHV LQTG KHYLGPF+  GKI  ++PPFTED+PRLDAPNFYY
Sbjct: 121 AMLRNVLTAVIPNAPNLRHVSLQTGGKHYLGPFDLIGKINSHEPPFTEDLPRLDAPNFYY 180

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           T EDILFEE +KKE LSWSVHRP  IFGFSPYSLMNLVG LCVYAA+CKHEG+PL+FPGT
Sbjct: 181 TQEDILFEETQKKEGLSWSVHRPQVIFGFSPYSLMNLVGTLCVYAAICKHEGVPLKFPGT 240

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           K AWE YS+ASDADLIAE  IWAAVDPYAKNEAFNC+NGDVF+WK LWKVLAEQFGIE+Y
Sbjct: 241 KGAWESYSVASDADLIAEQHIWAAVDPYAKNEAFNCSNGDVFRWKQLWKVLAEQFGIEEY 300

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
           G  EE         R+KL+E MK K  VW+EIV+ENQL+ T++DEVG WWFVDL+  GE 
Sbjct: 301 GFDEE-------GPRLKLSELMKDKGPVWDEIVKENQLEATKIDEVGEWWFVDLMFGGEG 353

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
            + SMNK+KEHGF GFRN+KNS I+WIDK + +KIVP
Sbjct: 354 AVDSMNKAKEHGFVGFRNTKNSLISWIDKTRAYKIVP 390

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374085803|gb|AEY82380.1| putative progesterone 5-beta-reductase [Lunaria annua]

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 293/397 (73%), Positives = 340/397 (85%), Gaps = 9/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWW AGAIGAA+K FEEDEP +SY+SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWGAGAIGAAKKKFEEDEPTQSYESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARRP+P+WNADH ++Y+QCDVSD ++ ++KLS LTDVTH+FYVTWTNR +E ++C+ NG
Sbjct: 61  VARRPRPSWNADHPIDYIQCDVSDADDARSKLSPLTDVTHVFYVTWTNRPSEHDSCEANG 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
           SM RNVLRA++PNAPNLRHVCLQTGTKHYLGPF+  GK + +DPPFTEDMPRL   NFYY
Sbjct: 121 SMLRNVLRAIVPNAPNLRHVCLQTGTKHYLGPFDNLGKSQHHDPPFTEDMPRLQIQNFYY 180

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           TLEDILFEE++KKE +SWS+HRP+TIFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+
Sbjct: 181 TLEDILFEEIKKKEGVSWSIHRPNTIFGFSPYSLMNIVGTLCVYAAICKHEGSPLVFPGS 240

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           K AWE ++ ASDADL+AE QIWAAVDPYAKNEAFNCNN D+FKWKH+WKVLAEQFGIE+Y
Sbjct: 241 KKAWEGFTAASDADLVAEQQIWAAVDPYAKNEAFNCNNADIFKWKHMWKVLAEQFGIEEY 300

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
           G  E +  G        L + MKGKE VWEE+V+ENQLQ  RL+EVG WWF D++L GE 
Sbjct: 301 GFEEGKNLG--------LVQMMKGKERVWEEMVKENQLQERRLEEVGVWWFADVILGGEG 352

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
            + SMNKSKEHGF GFRNS NSF +W+DK K FKIVP
Sbjct: 353 MIDSMNKSKEHGFLGFRNSNNSFSSWVDKYKAFKIVP 389

Source: Lunaria annua

Species: Lunaria annua

Genus: Lunaria

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345490|ref|XP_003636810.1| Progesterone 5-beta-reductase [Medicago truncatula] gi|355502745|gb|AES83948.1| Progesterone 5-beta-reductase [Medicago truncatula]

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 293/395 (74%), Positives = 337/395 (85%), Gaps = 8/395 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWWW+GAIGAA+K F+EDE   ++QSV LI+GVTGIVGNSLAEILPL DTPGG WKVYG
Sbjct: 1   MSWWWSGAIGAAKKKFDEDEAPPTFQSVGLIIGVTGIVGNSLAEILPLADTPGGRWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARRP+P+WNADH +EY+QCD++DP ETQ KLS LTDVTHIFYV+W+NR +EAENC++N 
Sbjct: 61  VARRPRPSWNADHPIEYIQCDITDPNETQTKLSVLTDVTHIFYVSWSNRPSEAENCEVNS 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
           +M RNVL AVIPNAPNLRHV LQTG KHYLGPF+  GKI  ++PPFTED+PRLDAPNFYY
Sbjct: 121 AMLRNVLTAVIPNAPNLRHVSLQTGGKHYLGPFDLIGKINSHEPPFTEDLPRLDAPNFYY 180

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           T EDILFEE +KKE LSWSVHRP  IFGFSPYSLMNLVG LCVYAA+CKHEG+PL+FPGT
Sbjct: 181 TQEDILFEETQKKEGLSWSVHRPQVIFGFSPYSLMNLVGTLCVYAAICKHEGVPLKFPGT 240

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           K AWE YS+ASDADLIAE  IWAAVDPYAKNEAFNC+NGDVF+WK LWKVLAEQFGIE+Y
Sbjct: 241 KGAWESYSVASDADLIAEQHIWAAVDPYAKNEAFNCSNGDVFRWKQLWKVLAEQFGIEEY 300

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
           G  EE         R+KL+E MK K  VW+EIV+ENQL+ T++DEVG WWFVDL+  GE 
Sbjct: 301 GFDEE-------GPRLKLSELMKDKGPVWDEIVKENQLEATKIDEVGEWWFVDLMFGGEG 353

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKI 394
            + SMNK+KEHGF GFRN+KNS I+WIDK + +KI
Sbjct: 354 AVDSMNKAKEHGFVGFRNTKNSLISWIDKTRAYKI 388

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226235456|dbj|BAH47640.1| progesterone 5beta reductase-A [Nicotiana tabacum]

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 290/397 (73%), Positives = 337/397 (84%), Gaps = 9/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWWWAGAIGAA+K FEED+    YQSVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKFEEDDAPPKYQSVALIIGVTGIVGNSLAEILPLADTPGGPWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           +ARRP+P+WNADH ++Y+QCD+S+PE+TQ+KLS LTDVTH+FYVTW +RSTE ENC+ING
Sbjct: 61  LARRPRPSWNADHPIDYIQCDISNPEDTQSKLSLLTDVTHVFYVTWASRSTEVENCEING 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
            MF+NV+  VIPN PNLRH+CLQTG KHYLGPFE +GK+  +D PF ED+PRLDAPNFYY
Sbjct: 121 KMFQNVVSVVIPNCPNLRHICLQTGRKHYLGPFELYGKLVAHDSPFHEDLPRLDAPNFYY 180

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           TLED+LF+EVEKKE L+WSVHRP  IFGFSPYSLMN+VG LCVYAA+CKHEG+PL+FPG 
Sbjct: 181 TLEDVLFKEVEKKEGLTWSVHRPGVIFGFSPYSLMNIVGTLCVYAAICKHEGLPLKFPGV 240

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           KAAW+ YS  SDADLIAEHQIWAAVDPYAKNEAFN +NGDVFKWKH WKVLAEQFG+E  
Sbjct: 241 KAAWDGYSDCSDADLIAEHQIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVEAA 300

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
              EE         R  L E MK K  VW+EIV+EN L PT+L++VG WWFVDL+L G+ 
Sbjct: 301 EFDEE--------NRCTLVEMMKDKGPVWDEIVKENGLTPTKLEDVGVWWFVDLMLAGDC 352

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
           +L +MNKSKEHGF GFRNS+ +FI+WIDKVK +K+VP
Sbjct: 353 RLDTMNKSKEHGFLGFRNSQKAFISWIDKVKAYKVVP 389

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|393757452|gb|AFN22088.1| putative progesterone 5-beta-reductase [Draba aizoides]

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 289/397 (72%), Positives = 339/397 (85%), Gaps = 9/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWW AGAIGAA+K FE+DEP++S++SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWGAGAIGAAKKKFEDDEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARRP+P+WNADH ++Y+QCDVSD ++T++KLS LTDVTH+FYVTWT+  +E+ENC+ NG
Sbjct: 61  VARRPRPSWNADHPIDYIQCDVSDADDTKSKLSALTDVTHVFYVTWTSGDSESENCEANG 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
           +M RNVLRAV+PNA NLRHVCLQTGTKHYLGPF+ F     ++PPFTEDMPRL  PNFYY
Sbjct: 121 TMLRNVLRAVVPNAANLRHVCLQTGTKHYLGPFDTFVSGSHHEPPFTEDMPRLQTPNFYY 180

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           TLED+L EE++KKE ++WSVHRP+TIFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+
Sbjct: 181 TLEDVLMEEIKKKEGVTWSVHRPNTIFGFSPYSLMNIVGTLCVYAAICKHEGSPLVFPGS 240

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           K AWE ++ ASDADL+AE QIWAAVD YAKNEAFNCNN D+FKWKHLWK+LAEQFGIE+Y
Sbjct: 241 KKAWEGFTTASDADLVAEQQIWAAVDSYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEY 300

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
           G     EEG    + + L E MKGKE VWEE+V+ENQLQ  +L+EVG WWF D +L  E 
Sbjct: 301 GF----EEG----KNLGLVEMMKGKEKVWEEMVKENQLQERKLEEVGVWWFADFILGVEG 352

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
            + SMNKSKEHGF GFRNS NSFI+WIDK K FKIVP
Sbjct: 353 MIDSMNKSKEHGFLGFRNSNNSFISWIDKYKAFKIVP 389

Source: Draba aizoides

Species: Draba aizoides

Genus: Draba

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458782|ref|XP_002285152.1| PREDICTED: uncharacterized protein C757.02c-like [Vitis vinifera]

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 289/397 (72%), Positives = 339/397 (85%), Gaps = 8/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWWWAGAIGAA+K F+ED+  R +QSV L++GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKFDEDDAPRGFQSVGLVIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARRP+P+WNADH VEY+QCD+SD E+  AKLS LTDVTH+FYVTWTNR+TE ENC+ NG
Sbjct: 61  VARRPRPDWNADHPVEYIQCDISDSEDALAKLSPLTDVTHVFYVTWTNRATEIENCEANG 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
           +M RNVLRA+IPNAPNLRH+CLQTG KHY+GPFEAFGKIKP+DPP+ ED+PRLDAPNFYY
Sbjct: 121 TMLRNVLRALIPNAPNLRHICLQTGGKHYIGPFEAFGKIKPHDPPYHEDLPRLDAPNFYY 180

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           TLEDILFEE EKK++L+WSVHRP  IFGFSPYS+MN++G LC+YAA+CKHEGIPL+FPG+
Sbjct: 181 TLEDILFEECEKKDDLTWSVHRPVIIFGFSPYSMMNILGTLCIYAAICKHEGIPLKFPGS 240

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           KAAW+CYS ASDADLIAE QIWA VDPYA+NEAFN  NGD+FKWKHLWKVLAEQF +E  
Sbjct: 241 KAAWDCYSDASDADLIAEQQIWATVDPYARNEAFNITNGDLFKWKHLWKVLAEQFDMEYA 300

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
              E         ++  + E MK K  VWEEIVRE +L PT+L++V  WWF+DLVL GE+
Sbjct: 301 EFEEG-------EEKQSMVEMMKDKGPVWEEIVREKELLPTKLEDVAQWWFIDLVLGGES 353

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
            L  MNKSKEHGF GFRNS+NSF+ WIDK++G K++P
Sbjct: 354 LLNCMNKSKEHGFLGFRNSRNSFVWWIDKMRGHKLIP 390

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226235458|dbj|BAH47641.1| progesterone 5beta reductase-B [Nicotiana tabacum]

 Score =  619 bits (1596), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 291/397 (73%), Positives = 335/397 (84%), Gaps = 10/397 (2%)

Query: 1   MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
           MSWWWAGAIGAA+K FEED+    YQSVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct: 1   MSWWWAGAIGAAKKKFEEDDAPPKYQSVALIIGVTGIVGNSLAEILPLADTPGGPWKVYG 60

Query: 60  VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
           VARRP+P+WNADH ++Y+QCD+S+PE+TQ+KLS LTDVTH+FYVTW +RSTE ENC+ING
Sbjct: 61  VARRPRPSWNADHPIDYIQCDISNPEDTQSKLSLLTDVTHVFYVTWASRSTEVENCEING 120

Query: 120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
            MF+NVL  +IPN PNLRH+CLQTG KHYLGPFE +GK+  +D PF ED+PRLDAPNFYY
Sbjct: 121 KMFQNVLSVIIPNCPNLRHICLQTGRKHYLGPFELYGKVA-HDFPFHEDLPRLDAPNFYY 179

Query: 180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
           TLED+LF+EVEKKE L+WSVHRP TIFGFSPYSLMN+VG LCVYAA+CKHEG+PL+FPG 
Sbjct: 180 TLEDVLFKEVEKKEGLTWSVHRPGTIFGFSPYSLMNIVGTLCVYAAICKHEGLPLKFPGV 239

Query: 240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           KAAW+ YS  SDADLIAEHQIWAAVDPYAKNEAFN  NGDVFKWKH WKVLAEQFG+E  
Sbjct: 240 KAAWDGYSDCSDADLIAEHQIWAAVDPYAKNEAFNVRNGDVFKWKHFWKVLAEQFGVEAA 299

Query: 300 GLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
              E          R  LAE MK K  VW+EIV+EN L P +L++VG WWFVDL+L G+ 
Sbjct: 300 EFDE--------VNRCTLAEMMKDKGPVWDEIVKENGLTPAKLEDVGVWWFVDLILAGDC 351

Query: 360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
            L +MNKSKEHGF GFRNS+ +FI+WIDKVK +K+VP
Sbjct: 352 PLDTMNKSKEHGFLGFRNSQKAFISWIDKVKAYKVVP 388

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145333900|ref|NP_001078438.1| WcaG domain-containing protein [Arabidopsis thaliana] gi|332659469|gb|AEE84869.1| WcaG domain-containing protein [Arabidopsis thaliana]

 Score =  619 bits (1596), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 289/396 (72%), Positives = 334/396 (84%), Gaps = 9/396 (2%)

Query: 1   MSWWWAGAIGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV 60
           MSWWWAGAIGAA+K +EDEP++S++SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYGV
Sbjct: 1   MSWWWAGAIGAAKKLDEDEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYGV 60

Query: 61  ARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGS 120
           ARRP+P WNADH ++Y+QCDVSD E+T++KLS LTDVTH+FYVTWTNR +E+ENC+ NGS
Sbjct: 61  ARRPRPTWNADHPIDYIQCDVSDAEDTRSKLSPLTDVTHVFYVTWTNRESESENCEANGS 120

Query: 121 MFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT 180
           M RNVL+A+IP APNLRHVCLQTGTKHYLGPF      + +DPPFTEDMPRL   NFYYT
Sbjct: 121 MLRNVLQAIIPYAPNLRHVCLQTGTKHYLGPFTNVDGPR-HDPPFTEDMPRLQIQNFYYT 179

Query: 181 LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK 240
            EDILFEE++K E ++WS+HRP+ IFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+K
Sbjct: 180 QEDILFEEIKKIETVTWSIHRPNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSK 239

Query: 241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG 300
            AWE +  ASDADLIAE QIWAAVDPYAKNEAFNCNN D+FKWKHLWK+LAEQFGIE+YG
Sbjct: 240 KAWEGFMTASDADLIAEQQIWAAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEYG 299

Query: 301 LSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAK 360
             E +  G        L E MKGKE VWEE+V+ENQLQ  +L+EVG WWF D++L  E  
Sbjct: 300 FEEGKNLG--------LVEMMKGKERVWEEMVKENQLQEKKLEEVGVWWFADVILGVEGM 351

Query: 361 LASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
           + SMNKSKE+GF GFRNS NSFI+WIDK K FKIVP
Sbjct: 352 IDSMNKSKEYGFLGFRNSNNSFISWIDKYKAFKIVP 387

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	396
TAIR|locus:2135932	388	VEP1 "VEIN PATTERNING 1" [Arab	0.977	0.997	0.710	5.9e-160
UNIPROTKB|Q48IK0	353	PSPPH_2587 "Aldo-keto reductas	0.878	0.985	0.378	2.3e-62
UNIPROTKB|Q882D3	353	PSPTO_2695 "Uncharacterized pr	0.878	0.985	0.378	3.8e-62
TAIR|locus:2178793	386	AT5G58750 [Arabidopsis thalian	0.906	0.930	0.349	2e-56
UNIPROTKB|Q4K649	386	PFL_5207 "Uncharacterized prot	0.873	0.896	0.318	1.7e-43
ASPGD|ASPL0000051603	376	AN9028 [Emericella nidulans (t	0.891	0.938	0.311	2.6e-38
POMBASE|SPCC757.02c	405	SPCC757.02c "epimarase (predic	0.648	0.634	0.281	6.2e-33
ASPGD|ASPL0000017248	424	AN4177 [Emericella nidulans (t	0.646	0.603	0.293	3.8e-28
ASPGD|ASPL0000040978	437	AN2921 [Emericella nidulans (t	0.646	0.585	0.305	9.2e-23

TAIR|locus:2135932 VEP1 "VEIN PATTERNING 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1558 (553.5 bits), Expect = 5.9e-160, P = 5.9e-160
 Identities = 282/397 (71%), Positives = 327/397 (82%)

Query:     1 MSWWWAGAIGAARK-FEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG 59
             MSWWWAGAIGAA+K  +EDEP++S++SVALI+GVTGIVGNSLAEILPL DTPGGPWKVYG
Sbjct:     1 MSWWWAGAIGAAKKKLDEDEPSQSFESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYG 60

Query:    60 VARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKING 119
             VARRP+P WNADH ++Y+QCDVSD E+T++KLS LTDVTH+FYVTWTNR +E+ENC+ NG
Sbjct:    61 VARRPRPTWNADHPIDYIQCDVSDAEDTRSKLSPLTDVTHVFYVTWTNRESESENCEANG 120

Query:   120 SMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY 179
             SM RNVL+A+IP APNLRHVCLQTGTKHYLGPF      + +DPPFTEDMPRL   NFYY
Sbjct:   121 SMLRNVLQAIIPYAPNLRHVCLQTGTKHYLGPFTNVDGPR-HDPPFTEDMPRLQIQNFYY 179

Query:   180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT 239
             T EDILFEE++K E ++WS+HRP+ IFGFSPYSLMN+VG LCVYAA+CKHEG PL FPG+
Sbjct:   180 TQEDILFEEIKKIETVTWSIHRPNMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGS 239

Query:   240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXX 299
             K AWE +  ASDADLIAE QIWAAVDPYAKNEAFNCNN D+FKWKHLWK+LAEQF     
Sbjct:   240 KKAWEGFMTASDADLIAEQQIWAAVDPYAKNEAFNCNNADIFKWKHLWKILAEQFGIEEY 299

Query:   300 XXXXXXXXXXXXTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEA 359
                          + + L E MKGKE VWEE+V+ENQLQ  +L+EVG WWF D++L  E 
Sbjct:   300 GFEEG--------KNLGLVEMMKGKERVWEEMVKENQLQEKKLEEVGVWWFADVILGVEG 351

Query:   360 KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP 396
              + SMNKSKE+GF GFRNS NSFI+WIDK K FKIVP
Sbjct:   352 MIDSMNKSKEYGFLGFRNSNNSFISWIDKYKAFKIVP 388

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP

GO:0010051 "xylem and phloem pattern formation" evidence=IMP

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0035671 "enone reductase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|Q48IK0 PSPPH_2587 "Aldo-keto reductase family protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 140/370 (37%), Positives = 212/370 (57%)

Query:    28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 87
             AL+VG +GIVG+++ ++L   D     W+V  ++R P    +A   V  V  D+ +P+  
Sbjct:     5 ALVVGASGIVGSAITQLLLEND-----WQVAALSRSP----SARPGVIPVAADLQNPKSV 55

Query:    88 QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH 147
              A L+ L   TH+F  TW+ ++TEAEN ++N +M RNVL AV P A +++HV L TG KH
Sbjct:    56 SAALADLKP-THVFITTWSRQATEAENIRVNAAMVRNVLDAVRP-AGSVKHVALVTGLKH 113

Query:   148 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 207
             YLGPFEA+GK      PF E   RLD  NFYY  ED +F   EK +  +WSVHRP T+ G
Sbjct:   114 YLGPFEAYGKGTLPQTPFRETQARLDIENFYYAQEDEVFAAAEK-DGFTWSVHRPHTVTG 172

Query:   208 FSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY 267
              +  + MN+   L VYA++CK  G P  FPG++  W+  +  +DA  +A  Q+WAA  P 
Sbjct:   173 VAVGNAMNMATTLAVYASICKATGRPFVFPGSRVQWDSLTDMTDARQLAHQQLWAATTPA 232

Query:   268 AKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQRVKLAEFMKGKEGV 327
             A N+AFN  NGDVF+W  +W  +AE F                 ++   L   M   +  
Sbjct:   233 AANQAFNITNGDVFRWSWMWGQIAEYFDLQPADFP---------SEPAPLETQMADDQAA 283

Query:   328 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLAS-MNKSKEHGFSGFRNSKNSFITWI 386
             W +IVRE+QL+   ++ + + W  D  L    ++ + M+KS++ GF+ F+ S ++F    
Sbjct:   284 WTDIVREHQLKEGDINRLISPWHTDADLGRPIEVVTDMSKSRKLGFTAFQASDDAFFEVF 343

Query:   387 DKVKGFKIVP 396
             +K++  +++P
Sbjct:   344 EKLRRDRLIP 353

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|Q882D3 PSPTO_2695 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 140/370 (37%), Positives = 208/370 (56%)

Query:    28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 87
             AL+VG +GIVG+++ ++L   D     W+V  ++R P         V  V  D+ DP   
Sbjct:     5 ALVVGASGIVGSAITQLLLEND-----WQVAALSRSPSTRPG----VIPVAADLQDPASV 55

Query:    88 QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH 147
              A L+ L   THIF  TW+ ++TEAEN ++N +M RNVL AV P A +++HV L TG KH
Sbjct:    56 TAALADLRP-THIFITTWSRQATEAENIRVNAAMVRNVLDAVRP-AGSVKHVALVTGLKH 113

Query:   148 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 207
             YLGPFEA+GK      PF E  PRLD  NFYY  ED +F   EK +  +WSVHRP T+ G
Sbjct:   114 YLGPFEAYGKGTLPQTPFRESQPRLDIENFYYAQEDEVFAAAEK-DRFTWSVHRPHTVTG 172

Query:   208 FSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY 267
              +  + MN+   L VYA++CK  G P  FPG++  W+  +  +DA  +A  Q+WAA  P 
Sbjct:   173 VAVGNAMNMATTLAVYASICKATGRPFVFPGSRVQWDSLTDMTDARQLAHQQLWAATTPA 232

Query:   268 AKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQRVKLAEFMKGKEGV 327
             A N+AFN  NGDVF+W  +W  +A  F                 +Q   L   M   +  
Sbjct:   233 AANQAFNITNGDVFRWSWMWGQIAGYFGLEPADFP---------SQPALLETQMADDQTA 283

Query:   328 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLAS-MNKSKEHGFSGFRNSKNSFITWI 386
             W  I +E+QL+ + ++ + + W  D  L    ++ + M+KS++ GF+ F+ S ++F    
Sbjct:   284 WTRIAQEHQLKESDINRLISPWHTDADLGRPIEVVTDMSKSRKLGFTAFQASDDAFFEVF 343

Query:   387 DKVKGFKIVP 396
             +K++  +++P
Sbjct:   344 EKLRRDRLIP 353

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2178793 AT5G58750 [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 134/383 (34%), Positives = 209/383 (54%)

Query:    25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP 84
             ++VALI GVTG+VG  + + L L   PG  W++YGVAR P+ N +   +  ++ CD+ + 
Sbjct:    16 ENVALIFGVTGLVGREIVKTL-LMSKPG--WRIYGVARNPEIN-SMTKMYNFISCDLLNA 71

Query:    85 EETQAKLSQLTD-VTHIFYVTWTNR-STEAENCKI-NGSMFRNVLRAVIPNAPNLRHVCL 141
              ET+ +LS L D V+H+F+VTW+     + + C + N +M  N L A++PNA  L+H  L
Sbjct:    72 SETKQRLSPLQDIVSHVFWVTWSGEFPLDTDECCVQNKTMLMNALDAILPNAKRLKHFSL 131

Query:   142 QTGTKHYLGPFE---AFGKIKPYDPPFTEDMPRLDA-PNFYYTLEDILFEEVEKKEELSW 197
             QTG KHY+   E   A G+       ++E+ PR  +  NFYY LED+L E++ +   + W
Sbjct:   132 QTGMKHYVSLVEETMARGEGSSLYY-YSEECPRKSSGKNFYYVLEDLLKEKITRSSVV-W 189

Query:   198 SVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE-CYSIASDADLIA 256
             SV RP  + G S  +L N +G+LCVY A+CK+  +P  F GT+  WE  Y   SD++L+A
Sbjct:   190 SVQRPGLLMGSSSRTLYNFMGSLCVYGAMCKYLNLPFVFGGTRECWEESYIDGSDSNLVA 249

Query:   257 EHQIWAAVDPYA--KNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQR 314
             E  I+AA       K EAFN  NG  F WK +W  + ++                   + 
Sbjct:   250 EQHIFAATSGKVREKGEAFNAINGVGFTWKEIWPEIGKKLGVQVNETTMFDEGFWFGREM 309

Query:   315 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKL-ASMNKSKEHGFS 373
             V+       ++ VW+EIV + +L  T ++++  W+F+D +     KL     K    GF 
Sbjct:   310 VE-------RKHVWDEIVVKEKLVRTEIEDLANWYFLDALFRCPFKLLGKREKVDRFGFK 362

Query:   374 GFRNSKNSFITWIDKVKGFKIVP 396
                 + +S + WID ++  K++P
Sbjct:   363 RKYRTLDSVLYWIDVMRDEKLIP 385

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q4K649 PFL_5207 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 118/371 (31%), Positives = 186/371 (50%)

Query:    29 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADH--LVEYVQCDVSDPEE 86
             L++G  G+VG ++ E++    TPG  W++   ARR  P    D      ++  D+ D   
Sbjct:    38 LVIGGYGVVGTAVVELMHR--TPG--WQLTTAARRRPPTSLLDGSPAPAHISADLLDVAG 93

Query:    87 TQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTK 146
             T    + L  VT + +  ++ R + A     N +M  + L+A+      LR V L  G K
Sbjct:    94 TARAFAGLGSVTDLVFCAYSERESMAATVAPNLAMLEHSLKALRQAGARLRQVVLIGGGK 153

Query:   147 HYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIF 206
              Y G  E  G    Y  P  E  PR   P FY   ED+L+ E E+ E  +W+V RPD + 
Sbjct:   154 SY-G--EHLGS---YKTPAKESDPRFMGPIFYNDQEDLLWHEAER-EGFAWTVLRPDGVM 206

Query:   207 GFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP 266
             G S  S MN++  +  +AA+ +   +PLRFPG+  AW     A+D+ ++A+  +WA   P
Sbjct:   207 GPSLNSPMNILTGIASFAAISQALNLPLRFPGSLQAWSALHQATDSRVLAQAVLWALTSP 266

Query:   267 YAKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQRVKLAEFMKGKEG 326
              A+ + FN  NGD F+W+HLW  +A  F                  Q + L   M  K  
Sbjct:   267 NAQQQVFNVTNGDHFRWQHLWPQIAGFFGLASAA-----------PQPMNLGVQMADKAP 315

Query:   327 VWEEIVRENQLQPTRLDEVGAWWFVDLVL-TGEAKLASMNKSKEHGFSGFRNSKNSFITW 385
             +W  IV+E QL+PT  +++ AW FVD  L TG   + S  K ++ GF+G  +S  S +  
Sbjct:   316 LWARIVQEQQLRPTPWEQIAAWPFVDGWLNTGYDMVQSTIKIRQAGFTGCIDSHQSVLEQ 375

Query:   386 IDKVKGFKIVP 396
             + +++ ++++P
Sbjct:   376 LQRLRDYRLIP 386

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000051603 AN9028 [Emericella nidulans (taxid:162425)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 118/379 (31%), Positives = 183/379 (48%)

Query:    28 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEE 86
             ALI G  GI G+++ E L + +T    W ++   +R P      D  VE++  D S+P E
Sbjct:     5 ALITGANGITGSAILEYL-VKNTTASEWERIIITSRSPLKTAVNDSRVEFIALDFSNPPE 63

Query:    87 TQAKL--SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144
               A    SQ  DVTH ++ ++ ++   AE  + N S+F N L A++  A  L++  LQTG
Sbjct:    64 KLADQMRSQCADVTHAYFSSYVHKDDFAELNEANRSLFENFLNALVDVAKGLQNCTLQTG 123

Query:   145 TKHYLGPFEAFGKIKPYDPPFTEDMPRL--DAPNFYYTLEDILFEEVEKKEELSWSVHRP 202
              K+Y         ++P   P  E  PRL     NFYY  ED L E+ ++    +W+V RP
Sbjct:   124 GKYYNV------HVRPVPWPAHEGHPRLVRAEENFYYHQEDFLAEK-QRGSNWTWNVIRP 176

Query:   203 DTIFGFSPY-SLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW 261
             + I G++   + MN    + +Y  + K  G+    P   A +      SDA LIA+  I+
Sbjct:   177 EAIIGYTTKPNGMNEALTIALYFLINKELGVEAPMPTNAAYFNGVDDVSDARLIADLTIY 236

Query:   262 AAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQR---VKLA 318
             A+      NEAFN  NGDVF W+++W  LA+ F                  +    + L 
Sbjct:   237 ASTHKNCANEAFNVTNGDVFSWRYMWPRLADWFGAKASSNQSFNRTSFKEGETHLDLNLE 296

Query:   319 EFMKGKEGVWEEIVRE--NQLQPTRLDEVGAWWFVDLVL--TGEAKLASMNKSKEHGFSG 374
             ++ + K  VW  +  +  + L     D  G W F D V   T  + L S+NK+++ G++G
Sbjct:   297 QWAQDKREVWNRLCDKAGSPLSKASFD-AGTWTFQDWVFQRTWSSPL-SINKARKFGWTG 354

Query:   375 FRNSKNSFITWIDKVKGFK 393
               +S +SF+   D  K FK
Sbjct:   355 HLDSFDSFV---DAFKRFK 370

GO:0008150 "biological_process" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

POMBASE|SPCC757.02c SPCC757.02c "epimarase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 287 (106.1 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
 Identities = 78/277 (28%), Positives = 134/277 (48%)

Query:    27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDV--SDP 84
             VA++ G TG+ G ++ + L   D       ++ ++R  K  +     +++   D+   +P
Sbjct:     7 VAIVTGATGLNGAAIIKRLSEDDNCK---TIHCISRSLKDEY--PRKIKHHSIDLLNEEP 61

Query:    85 EETQAKLSQ--LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAV-IPNAPNLRHVCL 141
             ++   K S   +  + + ++  +   + E + C++NG+M RN ++A+ + +   LR V L
Sbjct:    62 KDIAKKFSLEGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVIL 121

Query:   142 QTGTKHYLGPFEAFGKIKPYDPPFTEDM--PRL--DAPNFYYTLEDILFEEVEKKEELSW 197
              TG K Y G     G+++   P    D+  P      PNFYY  EDIL +E    ++  +
Sbjct:   122 TTGLKFY-GLH--LGEVRL--PMIETDIRVPETFSGTPNFYYVQEDIL-KEFSNGKKWDY 175

Query:   198 SVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE 257
             ++  P+ I G S  S MN    + +YA VC+    P RFPG +  +  +   S + LIA+
Sbjct:   176 TIAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIAD 235

Query:   258 HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF 294
              Q+W         E FN  NGD+  W   W  +AE F
Sbjct:   236 FQLWMTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYF 272

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000017248 AN4177 [Emericella nidulans (taxid:162425)]

 Score = 282 (104.3 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
 Identities = 82/279 (29%), Positives = 127/279 (45%)

Query:    28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 87
             A++ G TGI G+++   L          K+Y ++R   P +  D  +++   D+    + 
Sbjct:     4 AIVTGATGITGSAIVHHL---QKDASYKKIYALSRSD-PGYK-DPKLQHAAIDLQGSADD 58

Query:    88 QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP--NLRHVCLQTGT 145
              AK        ++++  +      AE C+ING+M  N ++A+        L+   L  G 
Sbjct:    59 MAKTLSGISAEYVYFCAYMAHDDPAELCRINGTMISNFIQALEKTGAISKLKRFILTCGF 118

Query:   146 KHYLGPFEAFGKIKPYDPPFTEDMPRLDA--------PNFYYTLEDILFEEVEKKE-ELS 196
             K Y       G  K    PF E+ P L+         PNFY+T + IL E   + E +  
Sbjct:   119 KQYS---VHLGNAKQ---PFHEEDPVLEGEVGGETWPPNFYFTQQRILAEAAARSEGQWD 172

Query:   197 WSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH-EGIPLRFPGTKAAWECYSIASDADLI 255
             W V  P  + GF+  + MN   A+ +Y  V K   G  L FPG KA +  ++  + A+L 
Sbjct:   173 WVVTLPQDVLGFARGNFMNEATAVGLYCTVSKVLPGSELPFPGCKAGYFAFNTWTSANLH 232

Query:   256 AEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF 294
             A+  +WAA    A N  FN  NGD   W+ LW  LA +F
Sbjct:   233 AKFCLWAATAKGAGNNIFNVINGDTESWQDLWPRLARRF 271

GO:0003824 "catalytic activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

ASPGD|ASPL0000040978 AN2921 [Emericella nidulans (taxid:162425)]

 Score = 256 (95.2 bits), Expect = 9.2e-23, Sum P(2) = 9.2e-23
 Identities = 88/288 (30%), Positives = 132/288 (45%)

Query:    28 ALIVGVTGIVGNSLAEILPL-PDTPGGPW-KVYGVARRPKP-NWNAD-----HLVEYVQC 79
             A++ G  G+ G ++  +L   P+     W K+Y ++RR  P N+  D       VE++  
Sbjct:    30 AVVTGANGLSGYNMVRVLSAAPER----WSKIYCLSRRAAPSNFFTDLGDGAARVEHIPV 85

Query:    80 D-VSDPEETQAKLSQ-LTDVTHIFYVTWTNRSTE---------AENC-KINGSMFRNVLR 127
             D +S+  E  ++L + +  V ++F+ ++     E         AE   K+N +M  N L 
Sbjct:    86 DFLSETAEIASRLREDIPKVDYVFFFSYMQPEQEGNVLGMWSDAEALTKVNSTMLNNFLG 145

Query:   128 AVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP-NFYYTLEDILF 186
             A+     + +   +QTG KHY      F  I P   P  E   R+    NFYY  ED L 
Sbjct:   146 ALQEANLHPKRFLIQTGAKHY-----GF-HIGPSTNPSFETDRRVSLEQNFYYLQEDALA 199

Query:   187 EEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY 246
                     + W+V RP  I G      +N +  L +YAA+  H   PL FPG   AW+  
Sbjct:   200 AYCAGTG-VGWNVVRPSYIIGAVRDGALNHMIGLAIYAAIQAHLNQPLYFPGDYIAWDRE 258

Query:   247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF 294
                S A L A  + WA + P A+N+AFN  +G  F W   W  LAE +
Sbjct:   259 VCQSTALLNAYFEEWAVLTPDAENQAFNIQDGLPFTWGRFWPNLAEWY 306

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6PQJ9	5BPOR_DIGLA	1, ., 3, ., 1, ., 3	0.7178	0.9797	0.9974	N/A	no
Q9STX2	VEP1_ARATH	1, ., 3, ., 1, ., 3	0.7279	0.9772	0.9974	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_701910.1 annotation not avaliable (388 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	396
cd08948	308	cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta	1e-142
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	7e-18
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-08
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-05
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	9e-04

>gnl|CDD|187652 cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs

 Score =  406 bits (1046), Expect = e-142
 Identities = 154/313 (49%), Positives = 190/313 (60%), Gaps = 10/313 (3%)

Query: 27  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE 86
           VAL+VG TGI G +L E L     PG  WKVYG++RRP P  +   LVE++  D+ DP +
Sbjct: 1   VALVVGATGISGWALVEHLL--SDPGTWWKVYGLSRRPLPTEDDPRLVEHIGIDLLDPAD 58

Query: 87  T--QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144
           T  +AKL  L DVTH+FY  +  R  EAE  ++NG+M RN L A+ P +PNL+HV LQTG
Sbjct: 59  TVLRAKLPGLEDVTHVFYAAYIERPDEAELVEVNGAMLRNFLDALEPASPNLKHVVLQTG 118

Query: 145 TKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDT 204
           TKHY      F   +P + P  ED PRL  PNFYY  ED+LFE  + K   +WSV RPD 
Sbjct: 119 TKHYGVHLGPFKTPRP-EEPAREDPPRLLPPNFYYDQEDLLFEAAKGKGW-TWSVLRPDA 176

Query: 205 IFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV 264
           I GF+P + MNL   L VYAA+C+  G PLRFPG+ AAW   S A+DA L+A   IWAA 
Sbjct: 177 IIGFAPGNAMNLALTLAVYAAICRELGAPLRFPGSPAAWNALSDATDARLLARFTIWAAT 236

Query: 265 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK 324
            P A NEAFN  NGDVF+WK LW  LAE FG+E  G   E E   G  +     E M   
Sbjct: 237 HPEAANEAFNVTNGDVFRWKELWPRLAEYFGLE--GAPPEPEAEAGADKAPVWEELMADH 294

Query: 325 E--GVWEEIVREN 335
                W+E+V  +
Sbjct: 295 GLQAAWDELVERH 307

5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 80.1 bits (198), Expect = 7e-18
 Identities = 45/247 (18%), Positives = 69/247 (27%), Gaps = 72/247 (29%)

Query: 28  ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 87
            LI+G TG +G +LA  L          +V  + R  K         E V     D  + 
Sbjct: 1   ILILGATGFIGRALARELLEQG-----HEVTLLVRNTKRLSK--EDQEPVAVVEGDLRDL 53

Query: 88  QAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH 147
            +    +  V  + ++    R T    C+++    RNVL A       ++H    +    
Sbjct: 54  DSLSDAVQGVDVVIHLAGAPRDTRD-FCEVDVEGTRNVLEAAKEAG--VKHFIFISSLGA 110

Query: 148 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 207
           Y    E   +  P  P                  E +L E         +++ RP  I+G
Sbjct: 111 YGDLHEE-TEPSPSSPYL----------AVKAKTEAVLREASLP-----YTIVRPGVIYG 154

Query: 208 FSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY 267
                                                          +A     A V P 
Sbjct: 155 ----------------------------------------------DLARAIANAVVTPG 168

Query: 268 AKNEAFN 274
            KNE FN
Sbjct: 169 KKNETFN 175

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 54.6 bits (131), Expect = 3e-08
 Identities = 58/293 (19%), Positives = 94/293 (32%), Gaps = 35/293 (11%)

Query: 29  LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ 88
           L+ G  G +G+ L E L L         V G+ R           VE+V  D++D +   
Sbjct: 4   LVTGGAGFIGSHLVERL-LAAG----HDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVD 58

Query: 89  AKLSQLTD-VTH---IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144
                + D V H      V  +N S  AE   +N     N+L A               G
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEA-----------ARAAG 107

Query: 145 TKH--YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY-YT--LEDILFEEVEKKEELSWSV 199
            K   +           P   P  ED+      N Y  +    + L     +   L   +
Sbjct: 108 VKRFVFASSVSVVY-GDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVI 166

Query: 200 HRPDTIFG-FSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH 258
            RP  ++G      L + V +  +   +     I +   G++     Y    D    A+ 
Sbjct: 167 LRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVY--VDDV---ADA 221

Query: 259 QIWAAVDPYAKNEAFNCNNGDV-FKWKHLWKVLAEQFGIEDYGLSEEEEEGGG 310
            + A  +P      FN  +G      + L + +AE  G +   +        G
Sbjct: 222 LLLALENP--DGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRG 272

Length = 314

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 26/150 (17%)

Query: 28  ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET 87
            L+ G TG +G+ L   L         ++V  + RR +        + + + D++DP+  
Sbjct: 1   ILVTGGTGFIGSHLVRRLL-----QEGYEVIVLGRRRRSESLNTGRIRFHEGDLTDPDAL 55

Query: 88  QAKLSQLTDVTHIFYV-----TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQ 142
             +L        + ++        +    A+  + N      +L A             +
Sbjct: 56  -ERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEA-----------ARR 103

Query: 143 TGTK--HYLGPFEAFGKIKPYDPPFTEDMP 170
            G K   +    E +G     DPP TED P
Sbjct: 104 AGVKRFVFASSSEVYG--DVADPPITEDTP 131

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 40.5 bits (95), Expect = 9e-04
 Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 30/191 (15%)

Query: 28  ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADH-LVEYVQCDVSDPE 85
            L+ G +G  G  L + L      GG + + + +A   +      H  +E+++ D++D  
Sbjct: 2   VLVTGGSGFFGERLVKQL---LERGGTYVRSFDIAPPGEALSAWQHPNIEFLKGDITDRN 58

Query: 86  ETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAV-IPNAPNLRHVCLQTG 144
           + +  LS    V H   +             +  +  R++   V +    N+   C + G
Sbjct: 59  DVEQALSGADCVFHTAAI-------------VPLAGPRDLYWEVNVGGTQNVLDACQRCG 105

Query: 145 TKH--YLGPFEAFGKIKPYDPPFT--EDMPRLDAPNFYYTLEDILFEEVEKK----EELS 196
            +   Y                    E +P     +  Y     + E +  +    ++L 
Sbjct: 106 VQKFVYTSSSSVIF---GGQNIHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLL 162

Query: 197 WSVHRPDTIFG 207
               RP  IFG
Sbjct: 163 TCALRPAGIFG 173

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	396
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.98
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.98
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.98
PLN00016	378	RNA-binding protein; Provisional	99.97
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.97
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.97
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.96
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.96
CHL00194	317	ycf39 Ycf39; Provisional	99.96
PRK05865	854	hypothetical protein; Provisional	99.96
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.95
PLN02583	297	cinnamoyl-CoA reductase	99.94
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.94
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.94
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.94
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.94
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.94
PLN02996	491	fatty acyl-CoA reductase	99.94
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.92
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.92
PLN02778	298	3,5-epimerase/4-reductase	99.92
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.92
PLN02503	605	fatty acyl-CoA reductase 2	99.89
PRK12320	699	hypothetical protein; Provisional	99.88
PLN02260	668	probable rhamnose biosynthetic enzyme	99.87
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.86
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.84
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.84
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.83
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.83
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.83
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.8
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.79
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.77
PLN03209	576	translocon at the inner envelope of chloroplast su	99.76
PRK06482	276	short chain dehydrogenase; Provisional	99.73
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.72
PRK09135	249	pteridine reductase; Provisional	99.69
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.67
PRK08263	275	short chain dehydrogenase; Provisional	99.65
PRK07806	248	short chain dehydrogenase; Provisional	99.64
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.64
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.62
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK05875	276	short chain dehydrogenase; Provisional	99.61
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.6
PRK07074	257	short chain dehydrogenase; Provisional	99.6
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.59
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.59
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.59
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.59
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK12829	264	short chain dehydrogenase; Provisional	99.57
PRK07067	257	sorbitol dehydrogenase; Provisional	99.57
PRK07774	250	short chain dehydrogenase; Provisional	99.56
PRK06180	277	short chain dehydrogenase; Provisional	99.56
PRK06914	280	short chain dehydrogenase; Provisional	99.55
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.54
PRK12746	254	short chain dehydrogenase; Provisional	99.54
PRK09134	258	short chain dehydrogenase; Provisional	99.53
KOG2774	366	consensus NAD dependent epimerase [General functio	99.53
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.52
PRK06128	300	oxidoreductase; Provisional	99.52
PRK07775	274	short chain dehydrogenase; Provisional	99.51
PRK06123	248	short chain dehydrogenase; Provisional	99.51
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.51
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.5
PRK12828	239	short chain dehydrogenase; Provisional	99.5
PRK06179	270	short chain dehydrogenase; Provisional	99.5
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.49
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.49
PRK06138	252	short chain dehydrogenase; Provisional	99.49
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.49
COG2910	211	Putative NADH-flavin reductase [General function p	99.49
PRK09186	256	flagellin modification protein A; Provisional	99.48
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK12827	249	short chain dehydrogenase; Provisional	99.48
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.47
PRK09291	257	short chain dehydrogenase; Provisional	99.47
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.46
PRK07024	257	short chain dehydrogenase; Provisional	99.46
PRK07890	258	short chain dehydrogenase; Provisional	99.46
PRK07577	234	short chain dehydrogenase; Provisional	99.45
PRK05993	277	short chain dehydrogenase; Provisional	99.45
PRK08219	227	short chain dehydrogenase; Provisional	99.45
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.45
PRK06194	287	hypothetical protein; Provisional	99.44
PRK07060	245	short chain dehydrogenase; Provisional	99.44
PRK06197	306	short chain dehydrogenase; Provisional	99.43
PRK06196	315	oxidoreductase; Provisional	99.43
PRK08264	238	short chain dehydrogenase; Validated	99.42
PRK06182	273	short chain dehydrogenase; Validated	99.42
PRK05876	275	short chain dehydrogenase; Provisional	99.42
PLN02253	280	xanthoxin dehydrogenase	99.42
PRK06701	290	short chain dehydrogenase; Provisional	99.42
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.41
PRK08324	681	short chain dehydrogenase; Validated	99.41
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.41
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.4
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.4
PRK06101	240	short chain dehydrogenase; Provisional	99.4
PRK07326	237	short chain dehydrogenase; Provisional	99.4
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.39
PRK05717	255	oxidoreductase; Validated	99.39
PRK06500	249	short chain dehydrogenase; Provisional	99.39
PRK08251	248	short chain dehydrogenase; Provisional	99.39
PRK08267	260	short chain dehydrogenase; Provisional	99.39
PRK12743	256	oxidoreductase; Provisional	99.39
PRK06523	260	short chain dehydrogenase; Provisional	99.38
PRK12937	245	short chain dehydrogenase; Provisional	99.38
PRK10538	248	malonic semialdehyde reductase; Provisional	99.37
PRK07102	243	short chain dehydrogenase; Provisional	99.37
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.37
PRK06398	258	aldose dehydrogenase; Validated	99.37
PRK08643	256	acetoin reductase; Validated	99.37
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.36
PRK07454	241	short chain dehydrogenase; Provisional	99.36
PRK12939	250	short chain dehydrogenase; Provisional	99.36
PRK07985	294	oxidoreductase; Provisional	99.36
PRK05854	313	short chain dehydrogenase; Provisional	99.35
PRK08628	258	short chain dehydrogenase; Provisional	99.34
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.34
PRK07825	273	short chain dehydrogenase; Provisional	99.34
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
PRK07023	243	short chain dehydrogenase; Provisional	99.33
PRK05693	274	short chain dehydrogenase; Provisional	99.32
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.32
PRK05866	293	short chain dehydrogenase; Provisional	99.32
PRK06181	263	short chain dehydrogenase; Provisional	99.32
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.32
PRK05650	270	short chain dehydrogenase; Provisional	99.32
PRK07856	252	short chain dehydrogenase; Provisional	99.32
PRK06057	255	short chain dehydrogenase; Provisional	99.31
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.31
PRK08177	225	short chain dehydrogenase; Provisional	99.31
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.3
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.3
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.3
PRK07904	253	short chain dehydrogenase; Provisional	99.3
PRK06953	222	short chain dehydrogenase; Provisional	99.3
PRK08017	256	oxidoreductase; Provisional	99.29
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.28
PRK06949	258	short chain dehydrogenase; Provisional	99.28
PRK07063	260	short chain dehydrogenase; Provisional	99.28
PRK09242	257	tropinone reductase; Provisional	99.28
PRK12742	237	oxidoreductase; Provisional	99.28
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.27
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.27
PRK08278	273	short chain dehydrogenase; Provisional	99.27
PRK06841	255	short chain dehydrogenase; Provisional	99.27
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.26
PRK08226	263	short chain dehydrogenase; Provisional	99.26
PRK12744	257	short chain dehydrogenase; Provisional	99.25
PRK07814	263	short chain dehydrogenase; Provisional	99.25
PRK07478	254	short chain dehydrogenase; Provisional	99.25
PRK08265	261	short chain dehydrogenase; Provisional	99.25
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.25
PRK09072	263	short chain dehydrogenase; Provisional	99.25
PRK06172	253	short chain dehydrogenase; Provisional	99.24
PRK07677	252	short chain dehydrogenase; Provisional	99.24
PRK07576	264	short chain dehydrogenase; Provisional	99.24
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.23
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.23
PRK08703	239	short chain dehydrogenase; Provisional	99.23
PRK06114	254	short chain dehydrogenase; Provisional	99.23
PRK07109	334	short chain dehydrogenase; Provisional	99.22
PRK07035	252	short chain dehydrogenase; Provisional	99.22
PRK06198	260	short chain dehydrogenase; Provisional	99.21
PRK07069	251	short chain dehydrogenase; Validated	99.21
PRK07201	657	short chain dehydrogenase; Provisional	99.2
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.2
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.2
PRK12747	252	short chain dehydrogenase; Provisional	99.2
PRK07832	272	short chain dehydrogenase; Provisional	99.2
PRK05867	253	short chain dehydrogenase; Provisional	99.19
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.19
PRK07041	230	short chain dehydrogenase; Provisional	99.19
PRK08589	272	short chain dehydrogenase; Validated	99.19
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.19
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.19
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.18
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.18
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.18
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.18
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.17
PRK06484	520	short chain dehydrogenase; Validated	99.17
PRK06483	236	dihydromonapterin reductase; Provisional	99.17
PRK07062	265	short chain dehydrogenase; Provisional	99.17
PRK05855	582	short chain dehydrogenase; Validated	99.16
PRK06139	330	short chain dehydrogenase; Provisional	99.16
PRK08339	263	short chain dehydrogenase; Provisional	99.16
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.16
PRK05884	223	short chain dehydrogenase; Provisional	99.15
PRK07578	199	short chain dehydrogenase; Provisional	99.15
PRK06924	251	short chain dehydrogenase; Provisional	99.15
PRK05872	296	short chain dehydrogenase; Provisional	99.14
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.14
PRK06940	275	short chain dehydrogenase; Provisional	99.13
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.12
PRK07831	262	short chain dehydrogenase; Provisional	99.1
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.09
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.09
PRK12367	245	short chain dehydrogenase; Provisional	99.08
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.06
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.05
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.04
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.04
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.02
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.02
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.01
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.0
PLN02780	320	ketoreductase/ oxidoreductase	98.98
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	98.95
PRK06484	520	short chain dehydrogenase; Validated	98.92
PRK06125	259	short chain dehydrogenase; Provisional	98.91
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.89
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.89
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.86
PRK07791	286	short chain dehydrogenase; Provisional	98.86
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	98.85
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.84
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.82
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.82
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	98.82
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.8
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.79
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.78
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	98.78
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	98.76
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.76
PRK08862	227	short chain dehydrogenase; Provisional	98.76
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.75
PRK08303	305	short chain dehydrogenase; Provisional	98.75
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.74
PRK05599	246	hypothetical protein; Provisional	98.74
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.71
KOG1208	314	consensus Dehydrogenases with different specificit	98.69
PTZ00325	321	malate dehydrogenase; Provisional	98.68
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	98.68
PRK08309	177	short chain dehydrogenase; Provisional	98.66
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.65
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.64
PLN00015	308	protochlorophyllide reductase	98.64
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.59
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.55
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.54
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.54
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.51
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.49
PLN00106	323	malate dehydrogenase	98.47
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.43
KOG0725	270	consensus Reductases with broad range of substrate	98.43
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.41
PRK09620	229	hypothetical protein; Provisional	98.36
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.33
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.32
COG1028	251	FabG Dehydrogenases with different specificities (	98.29
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.28
PRK06720	169	hypothetical protein; Provisional	98.28
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.28
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.19
PRK05086	312	malate dehydrogenase; Provisional	98.14
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.1
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.08
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.05
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.98
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.83
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	97.77
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	97.75
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.72
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.64
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.62
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.61
PRK14982	340	acyl-ACP reductase; Provisional	97.57
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.53
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	97.52
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.47
PRK05442	326	malate dehydrogenase; Provisional	97.46
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.4
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.4
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	97.39
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.22
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.19
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.17
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.15
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.14
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.08
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.0
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	96.97
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.93
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.81
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.75
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.73
COG3268	382	Uncharacterized conserved protein [Function unknow	96.71
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	96.71
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.67
PRK04148	134	hypothetical protein; Provisional	96.6
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.6
PLN02602	350	lactate dehydrogenase	96.57
PRK09496	453	trkA potassium transporter peripheral membrane com	96.54
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.51
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.46
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.45
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.45
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.43
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.42
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.31
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	96.23
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.23
PTZ00117	319	malate dehydrogenase; Provisional	96.2
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.11
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.08
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.01
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.87
PRK06223	307	malate dehydrogenase; Reviewed	95.84
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.79
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.65
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.58
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.57
PRK10669	558	putative cation:proton antiport protein; Provision	95.55
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.4
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.33
KOG1496	332	consensus Malate dehydrogenase [Energy production	95.23
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.21
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	95.15
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.89
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	94.76
PRK10537	393	voltage-gated potassium channel; Provisional	94.76
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	94.75
PRK09496	453	trkA potassium transporter peripheral membrane com	94.74
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	94.73
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	94.72
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.65
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	94.62
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.57
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.54
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	94.5
PLN02383	344	aspartate semialdehyde dehydrogenase	94.41
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	94.36
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.03
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	94.0
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	93.99
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	93.93
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	93.85
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	93.74
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	93.71
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	93.61
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	93.43
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	93.11
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	93.02
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	93.02
PLN02948	577	phosphoribosylaminoimidazole carboxylase	93.02
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	92.83
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.8
PLN02928	347	oxidoreductase family protein	92.78
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	92.74
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	92.7
PRK08306	296	dipicolinate synthase subunit A; Reviewed	92.64
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	92.59
PRK06849	389	hypothetical protein; Provisional	92.52
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	92.45
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.45
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	92.4
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	92.31
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	92.27
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.2
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	92.14
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	92.08
PRK08655	437	prephenate dehydrogenase; Provisional	92.08
PRK13243	333	glyoxylate reductase; Reviewed	92.06
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	91.96
PLN02712	667	arogenate dehydrogenase	91.93
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	91.91
PRK07877	722	hypothetical protein; Provisional	91.8
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	91.76
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	91.66
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	91.62
PRK06436	303	glycerate dehydrogenase; Provisional	91.61
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	91.5
PLN02256	304	arogenate dehydrogenase	91.45
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	91.45
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	91.39
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	91.35
PRK06487	317	glycerate dehydrogenase; Provisional	91.33
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	91.32
PRK07574	385	formate dehydrogenase; Provisional	91.28
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	91.19
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	91.19
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	91.19
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	91.16
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	90.77
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	90.77
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.74
PRK12480	330	D-lactate dehydrogenase; Provisional	90.61
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	90.45
PLN02735	1102	carbamoyl-phosphate synthase	90.44
KOG4288	283	consensus Predicted oxidoreductase [General functi	90.4
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	90.17
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	90.12
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	90.08
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	89.98
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	89.97
PRK06932	314	glycerate dehydrogenase; Provisional	89.91
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	89.79
PRK06444	197	prephenate dehydrogenase; Provisional	89.78
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	89.76
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	89.52
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	89.47
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	89.46
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	89.35
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	89.33
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	89.29
PRK08328	231	hypothetical protein; Provisional	89.23
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	89.19
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	89.14
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	89.13
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	89.12
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	88.97
PLN03139	386	formate dehydrogenase; Provisional	88.97
PRK06719	157	precorrin-2 dehydrogenase; Validated	88.94
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	88.93
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	88.9
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	88.8
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	88.76
PLN02306	386	hydroxypyruvate reductase	88.67
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	88.63
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	88.29
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	88.23
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	88.18
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	88.16
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	88.04
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	88.03
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	87.94
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	87.88
PRK12409	410	D-amino acid dehydrogenase small subunit; Provisio	87.85
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	87.84
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	87.7
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	87.69
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	87.66
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.61
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	87.52
PLN02696	454	1-deoxy-D-xylulose-5-phosphate reductoisomerase	87.5
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	87.44
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	87.3
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	87.28
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	87.26
PLN02775	286	Probable dihydrodipicolinate reductase	87.25
PLN00203	519	glutamyl-tRNA reductase	87.24
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	87.19
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	87.17
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	87.12
PRK15116	268	sulfur acceptor protein CsdL; Provisional	87.12
PRK07417	279	arogenate dehydrogenase; Reviewed	87.07
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	86.94
PRK06545	359	prephenate dehydrogenase; Validated	86.83
PRK08605	332	D-lactate dehydrogenase; Validated	86.76
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	86.69
PRK08818	370	prephenate dehydrogenase; Provisional	86.58
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	86.24
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	86.23
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	86.22
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	86.15
TIGR00243	389	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	86.02

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.6e-39  Score=281.41  Aligned_cols=304  Identities=17%  Similarity=0.171  Sum_probs=227.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC-------CCCCCCCeeEEEecCCChHHHHHHHhc--CCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-------NWNADHLVEYVQCDVSDPEETQAKLSQ--LTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-------~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~   96 (396)
                      |++|||||+||||++++++++++.   ..++|++++.-.-.       .....++..++++||.|.+.+..+++.  .|.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~---~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKH---PDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcC---CCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            579999999999999999999842   12468888875421       123457899999999999999999985  788


Q ss_pred             eeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           97 VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        97 V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      |+|+|+-+++..+  .|..+.++|+.||.+||+|+++.... .+|+.+|+.-       +||.....+..++|++|..|.
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDE-------VYG~l~~~~~~FtE~tp~~Ps  149 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDE-------VYGDLGLDDDAFTETTPYNPS  149 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEecccc-------ccccccCCCCCcccCCCCCCC
Confidence            9999998877654  78889999999999999999998532 4566665544       555543334478999999998


Q ss_pred             CCcchhH----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecc
Q 016047          175 PNFYYTL----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIAS  250 (396)
Q Consensus       175 ~~~~y~~----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~  250 (396)
                      ++  |++    ..++..++.+.+|++++|.|+++-||  |.....-+.++..   +..-.|+|+++.|++.+.+.|+++.
T Consensus       150 SP--YSASKAasD~lVray~~TYglp~~ItrcSNNYG--PyqfpEKlIP~~I---~nal~g~~lpvYGdG~~iRDWl~Ve  222 (340)
T COG1088         150 SP--YSASKAASDLLVRAYVRTYGLPATITRCSNNYG--PYQFPEKLIPLMI---INALLGKPLPVYGDGLQIRDWLYVE  222 (340)
T ss_pred             CC--cchhhhhHHHHHHHHHHHcCCceEEecCCCCcC--CCcCchhhhHHHH---HHHHcCCCCceecCCcceeeeEEeH
Confidence            77  553    34444444488999999999999999  5544332333322   1223588999999999999999999


Q ss_pred             cHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHH
Q 016047          251 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  330 (396)
Q Consensus       251 da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (396)
                      |-   |+++ ++....+..|++|||+++...+-.|+++.|.+.+|...+...             ++-.++.+       
T Consensus       223 Dh---~~ai-~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~-------------~li~~V~D-------  278 (340)
T COG1088         223 DH---CRAI-DLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYR-------------DLITFVED-------  278 (340)
T ss_pred             hH---HHHH-HHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchh-------------hheEeccC-------
Confidence            97   5553 344455677999999999999999999999999997644200             00011110       


Q ss_pred             HHHHhCCCcccccccccceeehhhhcCc-ccccchhhHh-hcCCCccccCHHHHHHHHHHHhhCCC
Q 016047          331 IVRENQLQPTRLDEVGAWWFVDLVLTGE-AKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGFKI  394 (396)
Q Consensus       331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~-~lG~~p~~~~~~~~~~~~~~~~~~~~  394 (396)
                              .               -..+ ++.+|.+|++ +|||.|+.++++||+++++||.+..|
T Consensus       279 --------R---------------pGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~~  321 (340)
T COG1088         279 --------R---------------PGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNEW  321 (340)
T ss_pred             --------C---------------CCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhchH
Confidence                    0               0112 6778999975 68999999999999999999998765

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.5e-38  Score=276.05  Aligned_cols=296  Identities=17%  Similarity=0.139  Sum_probs=218.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCC--eeEEEecCCChHHHHHHHhc--CCCeeEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL--VEYVQCDVSDPEETQAKLSQ--LTDVTHIF  101 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~--v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a  101 (396)
                      ++||||||+||||||.+.+|++     .||+|+++++-.......-..  ++++++|+.|.+.+++.|+.  +|.|+|+|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~-----~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLK-----TGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHH-----CCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            5899999999999999999999     899999999865433111122  68999999999999999876  56699999


Q ss_pred             EeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047          102 YVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  179 (396)
Q Consensus       102 ~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y  179 (396)
                      +...+..+  .|.++++.|+.||.+|+++|++++  +++++|.||..+|       |.  +...|++|+.|..|..+|+.
T Consensus        76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g--v~~~vFSStAavY-------G~--p~~~PI~E~~~~~p~NPYG~  144 (329)
T COG1087          76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG--VKKFIFSSTAAVY-------GE--PTTSPISETSPLAPINPYGR  144 (329)
T ss_pred             cccccchhhhCHHHHHhhchHhHHHHHHHHHHhC--CCEEEEecchhhc-------CC--CCCcccCCCCCCCCCCcchh
Confidence            98776554  789999999999999999999986  8999998876655       43  24679999999888767332


Q ss_pred             h---HHHHHHHHhhcCCCeeEEEEcCCceeecCCCC-------cchhHHHHHHHHHHhhhcCCCceecC------Ccccc
Q 016047          180 T---LEDILFEEVEKKEELSWSVHRPDTIFGFSPYS-------LMNLVGALCVYAAVCKHEGIPLRFPG------TKAAW  243 (396)
Q Consensus       180 ~---~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~g------~~~~~  243 (396)
                      +   .|++|..+. +.++++++++|..++.|..|..       ..+...++....++.+.  ..+.+.|      ++.-.
T Consensus       145 sKlm~E~iL~d~~-~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r--~~l~ifG~DY~T~DGT~i  221 (329)
T COG1087         145 SKLMSEEILRDAA-KANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKR--DKLFIFGDDYDTKDGTCI  221 (329)
T ss_pred             HHHHHHHHHHHHH-HhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCC--ceeEEeCCCCCCCCCCee
Confidence            2   377777776 6778999999999999986642       11334444333332221  1122222      23344


Q ss_pred             ceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHh
Q 016047          244 ECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  321 (396)
Q Consensus       244 ~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (396)
                      ++++|+.|.   |.+++.+...  ......+||+++|...|+.|+++.+.+..|.+.+....                  
T Consensus       222 RDYIHV~DL---A~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~------------------  280 (329)
T COG1087         222 RDYIHVDDL---ADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIA------------------  280 (329)
T ss_pred             eeeeehhHH---HHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeC------------------
Confidence            566666664   7777766532  22233699999999999999999999999977543100                  


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccc-cCHHHHHHHHHHHh
Q 016047          322 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVK  390 (396)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~~~~~~~~~~~~  390 (396)
                                 .+   ++.+.               ..++.|.+||++ |||+|++ +++++++++.+|..
T Consensus       281 -----------~R---R~GDp---------------a~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~  322 (329)
T COG1087         281 -----------PR---RAGDP---------------AILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQ  322 (329)
T ss_pred             -----------CC---CCCCC---------------ceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhh
Confidence                       00   11110               156789999986 6999999 99999999999987

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=2e-37  Score=294.70  Aligned_cols=301  Identities=16%  Similarity=0.130  Sum_probs=212.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------------CCCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------------NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      +|+|||||||||||++|+++|++     +|++|++++|......            ....+++++.+|+.|.+.+.++++
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLF-----LNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            47999999999999999999999     8999999998643210            001357889999999999999999


Q ss_pred             cCCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           93 QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      ++|.|+|+|+......  .++...+++|+.||.|++++|++.+  +++++++||..+|       |..  .+.+..|+++
T Consensus        90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~--~~~~v~~SS~~vy-------g~~--~~~~~~e~~~  158 (348)
T PRK15181         90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH--VSSFTYAASSSTY-------GDH--PDLPKIEERI  158 (348)
T ss_pred             CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEeechHhh-------CCC--CCCCCCCCCC
Confidence            9999999998644322  2566789999999999999999864  7789988765544       431  1345667766


Q ss_pred             CCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc--c-hhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          171 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--M-NLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       171 ~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                      ..|...  |+.     |+++..+. ++.+++++++||++|||++....  . .+...+..  .+  ..+.++.+.|++.+
T Consensus       159 ~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~--~~--~~~~~i~~~g~g~~  231 (348)
T PRK15181        159 GRPLSP--YAVTKYVNELYADVFA-RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWIL--SL--LKDEPIYINGDGST  231 (348)
T ss_pred             CCCCCh--hhHHHHHHHHHHHHHH-HHhCCCEEEEEecceeCcCCCCCCccccCHHHHHH--HH--HcCCCcEEeCCCCc
Confidence            555443  664     55555554 56789999999999999643211  1 12222211  11  12556677788888


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047          243 WECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  320 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  320 (396)
                      .++++|+.|+   |.+++.++....  ..+++|||++++.+|++|+++.+.+.++.......           ...+   
T Consensus       232 ~rd~i~v~D~---a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~-----------~~~~---  294 (348)
T PRK15181        232 SRDFCYIENV---IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQS-----------RAEP---  294 (348)
T ss_pred             eEeeEEHHHH---HHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCccccccc-----------CCCc---
Confidence            8888888887   777666554322  35789999999999999999999998874321100           0000   


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                   .+  .+.....            .....+|++|+++ +||+|+++++|+|+++++|++..
T Consensus       295 -------------~~--~~~~~~~------------~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        295 -------------IY--KDFRDGD------------VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             -------------cc--CCCCCCc------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence                         00  0000000            0134579999987 69999999999999999999764

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2e-34  Score=278.16  Aligned_cols=328  Identities=14%  Similarity=0.153  Sum_probs=210.5

Q ss_pred             cccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCCC--C------CCCCCeeEEEecCCCh
Q 016047           14 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--W------NADHLVEYVQCDVSDP   84 (396)
Q Consensus        14 ~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~--~------~~~~~v~~~~~Dl~d~   84 (396)
                      ..++++++... |+|||||||||||++|+++|++     + |++|++++|.+...  .      ....+++++.+|+.|.
T Consensus         4 ~~~~~~~~~~~-~~VlVTGgtGfIGs~lv~~L~~-----~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~   77 (386)
T PLN02427          4 RLDLDGKPIKP-LTICMIGAGGFIGSHLCEKLMT-----ETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHD   77 (386)
T ss_pred             hhcCCCCcccC-cEEEEECCcchHHHHHHHHHHh-----cCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCCh
Confidence            34566666665 6899999999999999999998     5 69999999865321  0      0124689999999999


Q ss_pred             HHHHHHHhcCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047           85 EETQAKLSQLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        85 ~~~~~~~~~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                      +.+.++++++|.|+|+|+.....  ..++.+.+..|+.++.+++++|++.+   ++|+++||..+|+.....+   .+.+
T Consensus        78 ~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~vYg~~~~~~---~~e~  151 (386)
T PLN02427         78 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSF---LPKD  151 (386)
T ss_pred             HHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeeeeeCCCcCCC---CCcc
Confidence            99999999999999999854321  12445667889999999999998753   5788888777775421110   0112


Q ss_pred             CCc---------cCCCCCC---C--CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC------cchhH
Q 016047          163 PPF---------TEDMPRL---D--APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS------LMNLV  217 (396)
Q Consensus       163 ~p~---------~E~~p~~---~--~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~------~~~~~  217 (396)
                      .|.         .|+.+..   +  .+...|+.     |+++..+. +.++++++++||++|||+....      .....
T Consensus       152 ~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~  230 (386)
T PLN02427        152 HPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEG-AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV  230 (386)
T ss_pred             cccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHH-hhcCCceEEecccceeCCCCCcccccccccccc
Confidence            222         2221111   1  11234664     55555544 5678999999999999954210      00011


Q ss_pred             HHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC-CCCceeeecCC-CeeeHHHHHHHHHHHhC
Q 016047          218 GALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNG-DVFKWKHLWKVLAEQFG  295 (396)
Q Consensus       218 ~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~-~~g~~~ni~~~-~~~s~~el~~~l~~~~g  295 (396)
                      ..+..........+.++.+.|++.+.++++|+.|+   |++++.++.++. ..+++||++++ ..+|++|+++.+.+.+|
T Consensus       231 ~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dv---a~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g  307 (386)
T PLN02427        231 PRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDA---IEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYA  307 (386)
T ss_pred             chHHHHHHHHHhcCCCeEEECCCCceECcEeHHHH---HHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhc
Confidence            11111110011135566667777776777777776   777777665543 45789999987 58999999999999998


Q ss_pred             CCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCc
Q 016047          296 IEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSG  374 (396)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p  374 (396)
                      .........       ...+..                    ....+.. ..  +.+.    .....|++|+++ +||+|
T Consensus       308 ~~~~~~~~~-------~~~~~~--------------------~~~~~~~-~~--~~~~----~~~~~d~~k~~~~lGw~p  353 (386)
T PLN02427        308 KVSGEPALE-------EPTVDV--------------------SSKEFYG-EG--YDDS----DKRIPDMTIINKQLGWNP  353 (386)
T ss_pred             ccccccccc-------cccccc--------------------CcccccC-cc--ccch----hhccCCHHHHHHhcCCCc
Confidence            532110000       000000                    0000000 00  0000    144579999987 69999


Q ss_pred             cccCHHHHHHHHHHHhh
Q 016047          375 FRNSKNSFITWIDKVKG  391 (396)
Q Consensus       375 ~~~~~~~~~~~~~~~~~  391 (396)
                      +++++++|+++++|+++
T Consensus       354 ~~~l~~gl~~~~~~~~~  370 (386)
T PLN02427        354 KTSLWDLLESTLTYQHK  370 (386)
T ss_pred             CccHHHHHHHHHHHHHH
Confidence            99999999999999864

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=4.4e-34  Score=270.88  Aligned_cols=301  Identities=15%  Similarity=0.148  Sum_probs=204.0

Q ss_pred             cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHH
Q 016047           20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ..-.++++|||||||||||++|+++|++     +||+|++++|+....       .. ...+++++.+|++|++++.+++
T Consensus         5 ~~~~~~~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   79 (342)
T PLN02214          5 VASPAGKTVCVTGAGGYIASWIVKILLE-----RGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI   79 (342)
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH
Confidence            3344567999999999999999999999     899999999975421       11 1135788999999999999999


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccc-eeecccccccccCCCCCCCccCCCC
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT-KHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~-~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      +++|.|+|+|+..   ..++...+++|+.|+.+++++|++.+  +++++++||. .+|+...      .....+++|+++
T Consensus        80 ~~~d~Vih~A~~~---~~~~~~~~~~nv~gt~~ll~aa~~~~--v~r~V~~SS~~avyg~~~------~~~~~~~~E~~~  148 (342)
T PLN02214         80 DGCDGVFHTASPV---TDDPEQMVEPAVNGAKFVINAAAEAK--VKRVVITSSIGAVYMDPN------RDPEAVVDESCW  148 (342)
T ss_pred             hcCCEEEEecCCC---CCCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeccceeeeccCC------CCCCcccCcccC
Confidence            9999999998743   34567889999999999999999864  6788888764 3453210      001234677642


Q ss_pred             CC---C-CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047          171 RL---D-APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  241 (396)
Q Consensus       171 ~~---~-~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  241 (396)
                      ..   + .+...|+.     |+++..+. ++.+++++++||++|||+......+..  +.....+.  .+.... .+  .
T Consensus       149 ~~~~~~~~p~~~Y~~sK~~aE~~~~~~~-~~~g~~~v~lRp~~vyGp~~~~~~~~~--~~~~~~~~--~g~~~~-~~--~  220 (342)
T PLN02214        149 SDLDFCKNTKNWYCYGKMVAEQAAWETA-KEKGVDLVVLNPVLVLGPPLQPTINAS--LYHVLKYL--TGSAKT-YA--N  220 (342)
T ss_pred             CChhhccccccHHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCceECCCCCCCCCch--HHHHHHHH--cCCccc-CC--C
Confidence            11   1 12233654     66666654 567999999999999995432111111  11111111  122222 22  2


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHh
Q 016047          242 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  321 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (396)
                      +.+.++|+.|+   |++++.++..+. .++.||+++ ...+++|+++.+++.++....+              ...    
T Consensus       221 ~~~~~i~V~Dv---a~a~~~al~~~~-~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~--------------~~~----  277 (342)
T PLN02214        221 LTQAYVDVRDV---ALAHVLVYEAPS-ASGRYLLAE-SARHRGEVVEILAKLFPEYPLP--------------TKC----  277 (342)
T ss_pred             CCcCeeEHHHH---HHHHHHHHhCcc-cCCcEEEec-CCCCHHHHHHHHHHHCCCCCCC--------------CCC----
Confidence            34567777666   788887776543 356899987 5789999999999998531111              000    


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047          322 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  396 (396)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~  396 (396)
                                   ....+..               .....+|++|+++|||+| ++++|+|+++++|+++.|++|
T Consensus       278 -------------~~~~~~~---------------~~~~~~d~~k~~~LG~~p-~~lee~i~~~~~~~~~~~~~~  323 (342)
T PLN02214        278 -------------KDEKNPR---------------AKPYKFTNQKIKDLGLEF-TSTKQSLYDTVKSLQEKGHLA  323 (342)
T ss_pred             -------------ccccCCC---------------CCccccCcHHHHHcCCcc-cCHHHHHHHHHHHHHHcCCCC
Confidence                         0000000               012347999999999998 699999999999999999975

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=4.8e-34  Score=278.19  Aligned_cols=306  Identities=19%  Similarity=0.110  Sum_probs=201.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------C---------------CCCCCeeEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W---------------NADHLVEYV   77 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~---------------~~~~~v~~~   77 (396)
                      ..+.|+|||||||||||++|+++|++     +|++|++++|.....         .               ....+++++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~-----~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v  118 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSK-----RGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY  118 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence            44568999999999999999999999     899999987532100         0               001258899


Q ss_pred             EecCCChHHHHHHHhc--CCCeeEEEEeccCCCc--c---HHHHHHhHHHHHHHHHHHHcccCCCcc-eEEEeccceeec
Q 016047           78 QCDVSDPEETQAKLSQ--LTDVTHIFYVTWTNRS--T---EAENCKINGSMFRNVLRAVIPNAPNLR-HVCLQTGTKHYL  149 (396)
Q Consensus        78 ~~Dl~d~~~~~~~~~~--~~~V~h~a~~~~~~~~--~---~~~~~~~nv~gt~~ll~a~~~~~~~~~-~~~~~s~~~~y~  149 (396)
                      .+|++|++.+.+++++  +|.|+|+|+.......  +   ....+++|+.||.+++++|++.+  ++ +++++||..+|+
T Consensus       119 ~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--v~~~~V~~SS~~vYG  196 (442)
T PLN02572        119 VGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--PDCHLVKLGTMGEYG  196 (442)
T ss_pred             ECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC--CCccEEEEecceecC
Confidence            9999999999999985  7889999865332211  1   23456899999999999999875  43 788777766665


Q ss_pred             ccccccccCCCCCCCcc------CCC---CCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-
Q 016047          150 GPFEAFGKIKPYDPPFT------EDM---PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-  214 (396)
Q Consensus       150 ss~~~~g~~~~~~~p~~------E~~---p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-  214 (396)
                      .+.   .+.  .+.+++      |++   |..|  ...|+.     |.++..+. +++|++++++||++|||++..... 
T Consensus       197 ~~~---~~~--~E~~i~~~~~~~e~~~~~~~~P--~s~Yg~SK~a~E~l~~~~~-~~~gl~~v~lR~~~vyGp~~~~~~~  268 (442)
T PLN02572        197 TPN---IDI--EEGYITITHNGRTDTLPYPKQA--SSFYHLSKVHDSHNIAFTC-KAWGIRATDLNQGVVYGVRTDETMM  268 (442)
T ss_pred             CCC---CCC--cccccccccccccccccCCCCC--CCcchhHHHHHHHHHHHHH-HhcCCCEEEEecccccCCCCccccc
Confidence            321   000  111121      232   2233  233664     55555544 677999999999999995422100 


Q ss_pred             -----------h-hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCC--ceeeecCCCe
Q 016047          215 -----------N-LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKN--EAFNCNNGDV  280 (396)
Q Consensus       215 -----------~-~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g--~~~ni~~~~~  280 (396)
                                 + +...+..++. ....+.++.+.|++.+.++++|+.|+   +.+++.++......|  .+||+++ ..
T Consensus       269 ~~~li~~~~~~~~~~~~i~~~~~-~~~~g~~i~v~g~G~~~Rdfi~V~Dv---a~a~~~al~~~~~~g~~~i~Nigs-~~  343 (442)
T PLN02572        269 DEELINRLDYDGVFGTALNRFCV-QAAVGHPLTVYGKGGQTRGFLDIRDT---VRCIEIAIANPAKPGEFRVFNQFT-EQ  343 (442)
T ss_pred             ccccccccCcccchhhHHHHHHH-HHhcCCCceecCCCCEEECeEEHHHH---HHHHHHHHhChhhcCceeEEEeCC-Cc
Confidence                       0 0011111111 11125666777888888888888887   677776665432334  5899976 67


Q ss_pred             eeHHHHHHHHHHH---hCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcC
Q 016047          281 FKWKHLWKVLAEQ---FGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTG  357 (396)
Q Consensus       281 ~s~~el~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  357 (396)
                      +|++|+++.+.+.   +|.+.....          .+.                         +... .         ..
T Consensus       344 ~si~el~~~i~~~~~~~g~~~~~~~----------~p~-------------------------~~~~-~---------~~  378 (442)
T PLN02572        344 FSVNELAKLVTKAGEKLGLDVEVIS----------VPN-------------------------PRVE-A---------EE  378 (442)
T ss_pred             eeHHHHHHHHHHHHHhhCCCCCeee----------CCC-------------------------Cccc-c---------cc
Confidence            9999999999998   775532100          000                         0000 0         00


Q ss_pred             cccccchhhHhhcCCCccc---cCHHHHHHHHHHHhhC
Q 016047          358 EAKLASMNKSKEHGFSGFR---NSKNSFITWIDKVKGF  392 (396)
Q Consensus       358 ~~~~~d~~k~~~lG~~p~~---~~~~~~~~~~~~~~~~  392 (396)
                      .....|++|+++|||+|++   ++++++.++++||++.
T Consensus       379 ~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~  416 (442)
T PLN02572        379 HYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDR  416 (442)
T ss_pred             cccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence            0234699999999999999   9999999999999854

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=3.8e-34  Score=277.71  Aligned_cols=298  Identities=15%  Similarity=0.143  Sum_probs=205.8

Q ss_pred             cccccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChH
Q 016047           12 ARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPE   85 (396)
Q Consensus        12 ~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~   85 (396)
                      +.|.++.=++..|  +|||||||||||++|+++|++     +|++|++++|.....      ....++++++.+|+.+..
T Consensus       109 ~~~~~~~~~~~~m--kILVTGatGFIGs~Lv~~Ll~-----~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~  181 (436)
T PLN02166        109 TGRVPVGIGRKRL--RIVVTGGAGFVGSHLVDKLIG-----RGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI  181 (436)
T ss_pred             cCCCCcccccCCC--EEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc
Confidence            3455544444444  899999999999999999999     899999999853211      112246788899987653


Q ss_pred             HHHHHHhcCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047           86 ETQAKLSQLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        86 ~~~~~~~~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                           +.++|.|+|+|+.....  ..++.+.+++|+.||.+|+++|++.+  . +++++||..+|       |..  ...
T Consensus       182 -----~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~-r~V~~SS~~VY-------g~~--~~~  244 (436)
T PLN02166        182 -----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--A-RFLLTSTSEVY-------GDP--LEH  244 (436)
T ss_pred             -----ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC--C-EEEEECcHHHh-------CCC--CCC
Confidence                 46799999999864432  13577889999999999999999875  3 67777765544       421  134


Q ss_pred             CccCCC-----CCCCCCCcchh-----HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCc-chhHHHHHHHHHHhhhcCC
Q 016047          164 PFTEDM-----PRLDAPNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-MNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       164 p~~E~~-----p~~~~~~~~y~-----~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~i~~~~~~  232 (396)
                      +.+|+.     |..|...  |+     .|+++..+. +..+++++++||++|||+..... ......+..  .+.  .+.
T Consensus       245 p~~E~~~~~~~p~~p~s~--Yg~SK~~aE~~~~~y~-~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~--~~l--~~~  317 (436)
T PLN02166        245 PQKETYWGNVNPIGERSC--YDEGKRTAETLAMDYH-RGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVA--QTI--RKQ  317 (436)
T ss_pred             CCCccccccCCCCCCCCc--hHHHHHHHHHHHHHHH-HHhCCCeEEEEEccccCCCCCCCccchHHHHHH--HHh--cCC
Confidence            566653     3333333  55     366776665 56789999999999999542211 112222211  111  245


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCc
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGT  312 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~  312 (396)
                      ++.+.|++.+.+.++|+.|+   +++++.++..  ..+++|||+++..+|++|+++.+++.+|.+.....          
T Consensus       318 ~i~v~g~g~~~rdfi~V~Dv---a~ai~~~~~~--~~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~----------  382 (436)
T PLN02166        318 PMTVYGDGKQTRSFQYVSDL---VDGLVALMEG--EHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEF----------  382 (436)
T ss_pred             CcEEeCCCCeEEeeEEHHHH---HHHHHHHHhc--CCCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeee----------
Confidence            66677888888888887776   6777666643  23568999999999999999999999986532100          


Q ss_pred             ccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          313 QRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                                             .  +..-..  .          .....|++|+++ +||+|+++++++|+++++|+++
T Consensus       383 -----------------------~--p~~~~~--~----------~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~  425 (436)
T PLN02166        383 -----------------------K--PNTADD--P----------HKRKPDISKAKELLNWEPKISLREGLPLMVSDFRN  425 (436)
T ss_pred             -----------------------C--CCCCCC--c----------cccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence                                   0  000000  0          023479999997 5999999999999999999976


Q ss_pred             C
Q 016047          392 F  392 (396)
Q Consensus       392 ~  392 (396)
                      +
T Consensus       426 ~  426 (436)
T PLN02166        426 R  426 (436)
T ss_pred             H
Confidence            4

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1.1e-33  Score=270.49  Aligned_cols=297  Identities=13%  Similarity=0.059  Sum_probs=207.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCC-CCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      .+|+|||||||||||++|+++|++     .||+|++++|........ ...++++.+|+.|.+.+.+++.++|.|+|+|+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~-----~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKA-----EGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHh-----CCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            458999999999999999999999     899999999865322111 12357889999999999888899999999987


Q ss_pred             eccC---CCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC--CCCCCCCc
Q 016047          103 VTWT---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM--PRLDAPNF  177 (396)
Q Consensus       103 ~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~--p~~~~~~~  177 (396)
                      ....   ...++......|+.++.||+++|++.+  +++|+++||..+|+... .    .....++.|+.  |..|.+. 
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~--vk~~V~~SS~~vYg~~~-~----~~~~~~~~E~~~~p~~p~s~-  166 (370)
T PLN02695         95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARING--VKRFFYASSACIYPEFK-Q----LETNVSLKESDAWPAEPQDA-  166 (370)
T ss_pred             ccCCccccccCchhhHHHHHHHHHHHHHHHHHhC--CCEEEEeCchhhcCCcc-c----cCcCCCcCcccCCCCCCCCH-
Confidence            5321   122345567889999999999998764  77899888766664321 0    00123466655  4444333 


Q ss_pred             chhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc--chh-HHHHHHHHHHhhhcCCCceecCCccccceeeec
Q 016047          178 YYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--MNL-VGALCVYAAVCKHEGIPLRFPGTKAAWECYSIA  249 (396)
Q Consensus       178 ~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~~~-~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~  249 (396)
                       |+.     |+++..+. ++.+++++++||++|||+.....  ... ...+.. ..+ + .+.++.++|++.+.+.++|+
T Consensus       167 -Yg~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~-~~~-~-~~~~i~~~g~g~~~r~~i~v  241 (370)
T PLN02695        167 -YGLEKLATEELCKHYT-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCR-KAL-T-STDEFEMWGDGKQTRSFTFI  241 (370)
T ss_pred             -HHHHHHHHHHHHHHHH-HHhCCCEEEEEECCccCCCCCccccccccHHHHHH-HHH-c-CCCCeEEeCCCCeEEeEEeH
Confidence             653     66666654 66799999999999999532111  111 112211 111 1 23566778888888888888


Q ss_pred             ccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHH
Q 016047          250 SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWE  329 (396)
Q Consensus       250 ~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (396)
                      .|+   +++++.++..+  .+++||++++..+|++|+++.+.+.+|.+.....            .+             
T Consensus       242 ~D~---a~ai~~~~~~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~------------~~-------------  291 (370)
T PLN02695        242 DEC---VEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKH------------IP-------------  291 (370)
T ss_pred             HHH---HHHHHHHHhcc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCcee------------cC-------------
Confidence            776   66766655432  3678999999999999999999999886432100            00             


Q ss_pred             HHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          330 EIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       330 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                              .+...   .            ....|++|+++ +||+|+++++++|+++++|+++
T Consensus       292 --------~~~~~---~------------~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~  331 (370)
T PLN02695        292 --------GPEGV---R------------GRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKE  331 (370)
T ss_pred             --------CCCCc---c------------ccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence                    00000   0            12369999996 6999999999999999999875

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.5e-33  Score=268.31  Aligned_cols=311  Identities=13%  Similarity=0.236  Sum_probs=206.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--CCCCCCCeeEEEecCC-ChHHHHHHHhcCCCeeEEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVS-DPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~-d~~~~~~~~~~~~~V~h~a~  102 (396)
                      |+|||||||||||++|+++|++.    .||+|++++|+...  ......+++++.+|+. +.+.+.++++++|.|+|+|+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~----~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa   77 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILET----TDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVA   77 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhC----CCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcc
Confidence            58999999999999999999972    37999999986532  1222346899999998 67788888899999999988


Q ss_pred             eccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC---C--CC
Q 016047          103 VTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL---D--AP  175 (396)
Q Consensus       103 ~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~---~--~~  175 (396)
                      .....  ..++...+++|+.++.+++++|++.+   ++++++||..+|+       ..  ...+++|+.+..   |  .+
T Consensus        78 ~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~---~~~v~~SS~~vyg-------~~--~~~~~~ee~~~~~~~~~~~p  145 (347)
T PRK11908         78 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYG-------MC--PDEEFDPEASPLVYGPINKP  145 (347)
T ss_pred             cCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC---CeEEEEecceeec-------cC--CCcCcCccccccccCcCCCc
Confidence            64332  23567788999999999999999853   5788887665553       21  123455554321   1  12


Q ss_pred             CcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc-------chhHHHHHHHHHHhhhcCCCceecCCcccc
Q 016047          176 NFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-------MNLVGALCVYAAVCKHEGIPLRFPGTKAAW  243 (396)
Q Consensus       176 ~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~  243 (396)
                      ...|+.     |+++..+. ++.+++++++||+++||++....       ..+...+   +. ....+.++.+.+++.+.
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~-~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~---~~-~~~~~~~~~~~~~g~~~  220 (347)
T PRK11908        146 RWIYACSKQLMDRVIWAYG-MEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQF---LG-HIVRGEPISLVDGGSQK  220 (347)
T ss_pred             cchHHHHHHHHHHHHHHHH-HHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHH---HH-HHhCCCceEEecCCcee
Confidence            334775     44555544 56789999999999999543211       1111111   11 11135566666777777


Q ss_pred             ceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCC-CeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047          244 ECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  320 (396)
Q Consensus       244 ~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~-~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  320 (396)
                      +.++|+.|+   +++++.++.++.  ..+++|||+++ ..+|++|+++.+.+.+|..+.. ..         .+..+ ++
T Consensus       221 r~~i~v~D~---a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~-~~---------~~~~~-~~  286 (347)
T PRK11908        221 RAFTDIDDG---IDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEY-AE---------SAKKV-KL  286 (347)
T ss_pred             eccccHHHH---HHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccc-cc---------ccccc-cc
Confidence            777777776   777777666543  45789999987 4799999999999999854221 00         00000 00


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      ..              .....+.. ..+  .+.    ..+..|++|+++ +||+|+++++++++++++|+++.
T Consensus       287 ~~--------------~~~~~~~~-~~~--~~~----~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~  338 (347)
T PRK11908        287 VE--------------TTSGAYYG-KGY--QDV----QNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH  338 (347)
T ss_pred             cc--------------CCchhccC-cCc--chh----ccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            00              00000000 000  000    134568999986 69999999999999999998754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.5e-33  Score=266.41  Aligned_cols=311  Identities=17%  Similarity=0.137  Sum_probs=207.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC----CCC---------CCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN---------ADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~~---------~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      |+|||||||||||++|+++|++     .|++|++++|++..    ...         ...+++++.+|++|.+.+.++++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   75 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLE-----KGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIID   75 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHH-----CCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHH
Confidence            5899999999999999999999     89999999997532    000         01358899999999999999998


Q ss_pred             c--CCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           93 Q--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        93 ~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                      +  +|.|+|+|+......  .++....++|+.||.+++++|++.+. +.++++++||..+|       |..  ...+.+|
T Consensus        76 ~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vy-------g~~--~~~~~~E  146 (343)
T TIGR01472        76 EIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELY-------GKV--QEIPQNE  146 (343)
T ss_pred             hCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhh-------CCC--CCCCCCC
Confidence            6  488999998644322  24566778999999999999998642 23478877765544       432  1346788


Q ss_pred             CCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhH-HHHHHHHH-HhhhcCC-CceecCC
Q 016047          168 DMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAA-VCKHEGI-PLRFPGT  239 (396)
Q Consensus       168 ~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~-i~~~~~~-~~~~~g~  239 (396)
                      +.|..|.+.  |+.     |.++..+. ++.++++++.|+.++||+..+.  ++. ..+..++. +.  .+. +..+.|+
T Consensus       147 ~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~~~~~~gp~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~g~  219 (343)
T TIGR01472       147 TTPFYPRSP--YAAAKLYAHWITVNYR-EAYGLFAVNGILFNHESPRRGE--NFVTRKITRAAAKIK--LGLQEKLYLGN  219 (343)
T ss_pred             CCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCceEEEeecccCCCCCCc--cccchHHHHHHHHHH--cCCCCceeeCC
Confidence            887666544  664     55555543 5668999999999999954322  211 11111111 11  233 2345688


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCC---
Q 016047          240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK---  316 (396)
Q Consensus       240 ~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---  316 (396)
                      +.+.++++|+.|+   |.+++.++..+  .+++|||+++..+|++|+++.+.+.+|.+.....          .++.   
T Consensus       220 g~~~rd~i~V~D~---a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~~  284 (343)
T TIGR01472       220 LDAKRDWGHAKDY---VEAMWLMLQQD--KPDDYVIATGETHSVREFVEVSFEYIGKTLNWKD----------KGINEVG  284 (343)
T ss_pred             CccccCceeHHHH---HHHHHHHHhcC--CCccEEecCCCceeHHHHHHHHHHHcCCCccccc----------ccccccc
Confidence            8888888888887   77777666543  2468999999999999999999999986532100          0000   


Q ss_pred             HHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          317 LAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                      .+.....       ..  ..+.+...   ..+   +    .....+|++|+++ +||+|+++++|+|+++++++++
T Consensus       285 ~~~~~~~-------~~--~~~~~~~~---~~~---~----~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       285 RCKETGK-------VH--VEIDPRYF---RPT---E----VDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             cccccCc-------ee--EEeCcccc---CCC---c----cchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            0000000       00  00000000   000   0    0134579999986 6999999999999999998874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=2.9e-33  Score=267.30  Aligned_cols=308  Identities=15%  Similarity=0.141  Sum_probs=208.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEE-EeCCCCC-C---C---CCCCCeeEEEecCCChHHHHHHHhc--CC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRPKP-N---W---NADHLVEYVQCDVSDPEETQAKLSQ--LT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~~~-~---~---~~~~~v~~~~~Dl~d~~~~~~~~~~--~~   95 (396)
                      ++|||||||||||++|+++|++     +|++|++ ++|.... .   .   ....+++++.+|+.|++++.+++++  +|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIIN-----ETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHH-----cCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCC
Confidence            5899999999999999999998     7887554 4443221 1   0   1123577899999999999998985  78


Q ss_pred             CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHccc-------CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPN-------APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~-------~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      .|+|+|+......  ..+...+++|+.||.+++++|.+.       ...+++++++||..+|       |.......+++
T Consensus        77 ~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vy-------g~~~~~~~~~~  149 (355)
T PRK10217         77 CVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVY-------GDLHSTDDFFT  149 (355)
T ss_pred             EEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhc-------CCCCCCCCCcC
Confidence            8999988654322  256778899999999999999863       1235678877765544       43211245678


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcCCCceecCCc
Q 016047          167 EDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTK  240 (396)
Q Consensus       167 E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~  240 (396)
                      |+.+..|...  |+.     |+++..+. ++.+++++++||++|||  |+... .+...+..    ....+.++++.|++
T Consensus       150 E~~~~~p~s~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~r~~~v~G--p~~~~~~~~~~~~~----~~~~~~~~~~~g~g  220 (355)
T PRK10217        150 ETTPYAPSSP--YSASKASSDHLVRAWL-RTYGLPTLITNCSNNYG--PYHFPEKLIPLMIL----NALAGKPLPVYGNG  220 (355)
T ss_pred             CCCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCeEEEeeeeeeC--CCCCcccHHHHHHH----HHhcCCCceEeCCC
Confidence            8877665444  654     55556554 56789999999999999  44321 22222211    11124566677888


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  320 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  320 (396)
                      .+.++++|+.|+   +.+++.++.. ...+++|||++++.+|++|+++.+++.+|...+..            +..+...
T Consensus       221 ~~~~~~i~v~D~---a~a~~~~~~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~------------~~~~~~~  284 (355)
T PRK10217        221 QQIRDWLYVEDH---ARALYCVATT-GKVGETYNIGGHNERKNLDVVETICELLEELAPNK------------PQGVAHY  284 (355)
T ss_pred             CeeeCcCcHHHH---HHHHHHHHhc-CCCCCeEEeCCCCcccHHHHHHHHHHHhccccccc------------ccccccc
Confidence            877777777776   7777666654 44578999999999999999999999998643221            1100000


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCC
Q 016047          321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK  393 (396)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~  393 (396)
                       ..       .. .+  .+....            ......+|++|+++ +||+|+++++|+|+++++|++...
T Consensus       285 -~~-------~~-~~--~~~~~~------------~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~  335 (355)
T PRK10217        285 -RD-------LI-TF--VADRPG------------HDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANE  335 (355)
T ss_pred             -cc-------cc-ee--cCCCCC------------CCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCH
Confidence             00       00 00  000000            00134579999975 799999999999999999997653

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=3.8e-33  Score=252.05  Aligned_cols=304  Identities=18%  Similarity=0.191  Sum_probs=208.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCeeEEEecCCChHHHHHHHhcC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      +.++|+|||||||||++++++|++     +||.|++.+|++...        .. ..+++..+.+||+|+++++.++++|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~-----rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc   79 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLS-----RGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC   79 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHh-----CCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC
Confidence            568999999999999999999999     899999999998652        11 2346889999999999999999999


Q ss_pred             CCeeEEEEeccCCCc-cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           95 TDVTHIFYVTWTNRS-TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~-~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      |.|||+|+....... ++.++.++++.||.|+|++|++.. .+++++++||...-...    ++.......++|+....+
T Consensus        80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~----~~~~~~~~vvdE~~wsd~  154 (327)
T KOG1502|consen   80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYN----GPNIGENSVVDEESWSDL  154 (327)
T ss_pred             CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccC----CcCCCCCcccccccCCcH
Confidence            999999886544333 355899999999999999999975 79999999864432211    111122445666653211


Q ss_pred             C----CCcchh-----HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047          174 A----PNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  244 (396)
Q Consensus       174 ~----~~~~y~-----~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  244 (396)
                      .    ....|.     .|+..+++. ++.+++.+.+.|+.|+||.-....+...  ...+.+..  |..-.++..   +.
T Consensus       155 ~~~~~~~~~Y~~sK~lAEkaAw~fa-~e~~~~lv~inP~lV~GP~l~~~l~~s~--~~~l~~i~--G~~~~~~n~---~~  226 (327)
T KOG1502|consen  155 DFCRCKKLWYALSKTLAEKAAWEFA-KENGLDLVTINPGLVFGPGLQPSLNSSL--NALLKLIK--GLAETYPNF---WL  226 (327)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHH-HhCCccEEEecCCceECCCcccccchhH--HHHHHHHh--cccccCCCC---ce
Confidence            1    112344     377778776 7779999999999999954322222211  11112222  211122221   12


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047          245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  324 (396)
Q Consensus       245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (396)
                      .++|+.|   +|.+++.+...+.+.|+ |.+.+ ...++.|+++++.+.+.....+...                     
T Consensus       227 ~~VdVrD---VA~AHv~a~E~~~a~GR-yic~~-~~~~~~ei~~~l~~~~P~~~ip~~~---------------------  280 (327)
T KOG1502|consen  227 AFVDVRD---VALAHVLALEKPSAKGR-YICVG-EVVSIKEIADILRELFPDYPIPKKN---------------------  280 (327)
T ss_pred             eeEeHHH---HHHHHHHHHcCcccCce-EEEec-CcccHHHHHHHHHHhCCCCCCCCCC---------------------
Confidence            3455544   59999998888777655 87776 5555999999999987543311000                     


Q ss_pred             hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047          325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  396 (396)
Q Consensus       325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~  396 (396)
                                 .  .+...            ....+.+|.+|++++|+.-.++++|++.++++++++.|.++
T Consensus       281 -----------~--~~~~~------------~~~~~~~~~~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l~  327 (327)
T KOG1502|consen  281 -----------A--EEHEG------------FLTSFKVSSEKLKSLGGFKFRPLEETLSDTVESLREKGLLL  327 (327)
T ss_pred             -----------C--ccccc------------cccccccccHHHHhcccceecChHHHHHHHHHHHHHhcCCC
Confidence                       0  00000            00023479999999985459999999999999999999874

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=4e-33  Score=285.34  Aligned_cols=314  Identities=16%  Similarity=0.212  Sum_probs=211.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHH-HHHHHhcCCCeeEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEE-TQAKLSQLTDVTHIF  101 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~-~~~~~~~~~~V~h~a  101 (396)
                      .|+|||||||||||++|+++|++.    +||+|++++|.+...  .....+++++.+|++|... ++++++++|.|+|+|
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA  390 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRD----DNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV  390 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhC----CCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence            479999999999999999999972    379999999976432  2223478999999998765 577889999999999


Q ss_pred             EeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC---CCC--
Q 016047          102 YVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR---LDA--  174 (396)
Q Consensus       102 ~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~---~~~--  174 (396)
                      +.....  ..++...+++|+.++.+++++|++.+   ++++++||..+|       |..  ...+++|+.+.   .|.  
T Consensus       391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~---~~~V~~SS~~vy-------g~~--~~~~~~E~~~~~~~~p~~~  458 (660)
T PRK08125        391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN---KRIIFPSTSEVY-------GMC--TDKYFDEDTSNLIVGPINK  458 (660)
T ss_pred             cccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC---CeEEEEcchhhc-------CCC--CCCCcCccccccccCCCCC
Confidence            865432  22566788999999999999999864   577877765544       431  13467777653   121  


Q ss_pred             CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-------hhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-------NLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                      +...|+.     |+++..+. +.++++++++||+++||++..+..       .....+   +. ....+.++.+.|++.+
T Consensus       459 p~s~Yg~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~---i~-~~~~~~~i~~~g~g~~  533 (660)
T PRK08125        459 QRWIYSVSKQLLDRVIWAYG-EKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQL---IL-NLVEGSPIKLVDGGKQ  533 (660)
T ss_pred             CccchHHHHHHHHHHHHHHH-HhcCCceEEEEEceeeCCCccccccccccccchHHHH---HH-HhcCCCCeEEeCCCce
Confidence            2234664     55555554 567899999999999995432110       111111   11 1112566667788888


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC-eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHH
Q 016047          243 WECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  319 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~-~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  319 (396)
                      .++++|+.|+   |.+++.++.+..  ..+++||+++++ .+|++|+++.+.+.+|.+.....            ++...
T Consensus       534 ~rd~i~v~Dv---a~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~------------~~~~~  598 (660)
T PRK08125        534 KRCFTDIRDG---IEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDH------------FPPFA  598 (660)
T ss_pred             eeceeeHHHH---HHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCccccc------------CCccc
Confidence            8888888776   777766665432  357899999985 79999999999999986432110            10000


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCC
Q 016047          320 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKI  394 (396)
Q Consensus       320 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~  394 (396)
                      ....             ........ ..+  .+.    ....+|++|+++ |||+|+++++++|+++++|+++..-
T Consensus       599 ~~~~-------------~~~~~~~~-~~~--~~~----~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~  654 (660)
T PRK08125        599 GFRV-------------VESSSYYG-KGY--QDV----EHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_pred             cccc-------------cccccccc-ccc--ccc----cccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccc
Confidence            0000             00000000 000  000    134579999996 6999999999999999999998654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=5.6e-33  Score=263.66  Aligned_cols=300  Identities=15%  Similarity=0.128  Sum_probs=207.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC----CCC--------CCCCeeEEEecCCChHHHHH
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN--------ADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~~--------~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      +..+++|||||||||||++|+++|++     +|++|++++|++..    ...        ...+++++.+|++|.+.+.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   77 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLS-----KGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRR   77 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHH
Confidence            44567999999999999999999999     89999999987532    100        11357899999999999998


Q ss_pred             HHhc--CCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCC---cceEEEeccceeecccccccccCCCCC
Q 016047           90 KLSQ--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPN---LRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        90 ~~~~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~---~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                      ++..  +|.|+|+|+......  .++...+++|+.|+.+++++|++.+..   +++++++||..       +||..   .
T Consensus        78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~-------vyg~~---~  147 (340)
T PLN02653         78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSE-------MYGST---P  147 (340)
T ss_pred             HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHH-------HhCCC---C
Confidence            8886  488999988643321  245667799999999999999887421   34777776544       45532   2


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHH-HHHHHH-HhhhcCCCc-
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGA-LCVYAA-VCKHEGIPL-  234 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~-i~~~~~~~~-  234 (396)
                      .+++|+.|..|...  |+.     |.++..+. .+++++++..|+.++||+..+.  ++... +..++. +.  .+.++ 
T Consensus       148 ~~~~E~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~~~~~~gp~~~~--~~~~~~~~~~~~~~~--~~~~~~  220 (340)
T PLN02653        148 PPQSETTPFHPRSP--YAVAKVAAHWYTVNYR-EAYGLFACNGILFNHESPRRGE--NFVTRKITRAVGRIK--VGLQKK  220 (340)
T ss_pred             CCCCCCCCCCCCCh--hHHHHHHHHHHHHHHH-HHcCCeEEEeeeccccCCCCCc--ccchhHHHHHHHHHH--cCCCCc
Confidence            36788887766544  654     55555543 5678888999999999953322  22211 111111 11  23333 


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR  314 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~  314 (396)
                      .+.|++.+.++++|+.|+   |.+++.++...  .++.||+++++.+|++|+++.+.+.+|.+....           ..
T Consensus       221 ~~~g~g~~~rd~i~v~D~---a~a~~~~~~~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~-----------~~  284 (340)
T PLN02653        221 LFLGNLDASRDWGFAGDY---VEAMWLMLQQE--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDH-----------VE  284 (340)
T ss_pred             eEeCCCcceecceeHHHH---HHHHHHHHhcC--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcc-----------ee
Confidence            345888888888888776   77777766543  256899999999999999999999998642110           00


Q ss_pred             CCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          315 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                      +..                 ....+...               ....+|++|+++ +||+|+++++|+|+++++|+++
T Consensus       285 ~~~-----------------~~~~~~~~---------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~  330 (340)
T PLN02653        285 IDP-----------------RYFRPAEV---------------DNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLE  330 (340)
T ss_pred             eCc-----------------ccCCcccc---------------ccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence            000                 00011110               133479999986 6999999999999999998764

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1e-32  Score=261.66  Aligned_cols=303  Identities=15%  Similarity=0.102  Sum_probs=198.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      +.++++||||||+||||++|+++|++     +|++|++++|++...        ....++++++.+|++|++.+.+++.+
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   80 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQ-----KGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAG   80 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHH-----CCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhc
Confidence            34468999999999999999999999     899999999875321        11113588999999999999999999


Q ss_pred             CCCeeEEEEeccCCCccH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC---
Q 016047           94 LTDVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM---  169 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~---  169 (396)
                      +|.|+|+|+.......++ ...+++|+.|+.+++++|++.. .+++++++||..+|+... ..+    ...+++|+.   
T Consensus        81 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~-~~~----~~~~~~E~~~~~  154 (338)
T PLN00198         81 CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINK-LSG----TGLVMNEKNWTD  154 (338)
T ss_pred             CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccC-CCC----CCceeccccCCc
Confidence            999999987532222233 3567999999999999998753 367899888776664310 001    122334431   


Q ss_pred             ------CCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecC
Q 016047          170 ------PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPG  238 (396)
Q Consensus       170 ------p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g  238 (396)
                            +..|  ...|+.     |+++..+. +.++++++++||++|||++.+........+  ...+.  .+.++.+.|
T Consensus       155 ~~~~~~~~~p--~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~--~~~~~--~~~~~~~~g  227 (338)
T PLN00198        155 VEFLTSEKPP--TWGYPASKTLAEKAAWKFA-EENNIDLITVIPTLMAGPSLTSDIPSSLSL--AMSLI--TGNEFLING  227 (338)
T ss_pred             hhhhhhcCCc--cchhHHHHHHHHHHHHHHH-HhcCceEEEEeCCceECCCccCCCCCcHHH--HHHHH--cCCcccccc
Confidence                  1112  222654     56666655 667899999999999995432111111111  11111  133333333


Q ss_pred             -Cccc----cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcc
Q 016047          239 -TKAA----WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQ  313 (396)
Q Consensus       239 -~~~~----~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~  313 (396)
                       .+.+    .++++|+.|+   |++++.++..+. .++.|+ +++..+|++|+++.+.+.++.....             
T Consensus       228 ~~~~~~~~~~~~~i~V~D~---a~a~~~~~~~~~-~~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~-------------  289 (338)
T PLN00198        228 LKGMQMLSGSISITHVEDV---CRAHIFLAEKES-ASGRYI-CCAANTSVPELAKFLIKRYPQYQVP-------------  289 (338)
T ss_pred             ccccccccCCcceeEHHHH---HHHHHHHhhCcC-cCCcEE-EecCCCCHHHHHHHHHHHCCCCCCC-------------
Confidence             1211    2456666555   777777665533 234685 5567789999999999887532111             


Q ss_pred             cCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCC
Q 016047          314 RVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFK  393 (396)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~  393 (396)
                       ..                  ++..+..                ....+|.+|++++||+|+++++|+|+++++|+++++
T Consensus       290 -~~------------------~~~~~~~----------------~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~  334 (338)
T PLN00198        290 -TD------------------FGDFPSK----------------AKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKG  334 (338)
T ss_pred             -cc------------------ccccCCC----------------CccccChHHHHhCCceecCcHHHHHHHHHHHHHHcC
Confidence             00                  0000000                023479999998999999999999999999999999


Q ss_pred             CC
Q 016047          394 IV  395 (396)
Q Consensus       394 ~~  395 (396)
                      ++
T Consensus       335 ~~  336 (338)
T PLN00198        335 LL  336 (338)
T ss_pred             CC
Confidence            86

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=9.8e-33  Score=268.30  Aligned_cols=287  Identities=16%  Similarity=0.121  Sum_probs=198.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      |+|||||||||||++|+++|++     +|++|++++|.....      .....+++++.+|+.++.     +.++|.|+|
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~-----~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViH  189 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMA-----RGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYH  189 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHH-----CcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hcCCCEEEE
Confidence            6899999999999999999999     899999998753211      112346788999987753     457899999


Q ss_pred             EEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC--CCCC-
Q 016047          100 IFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP--RLDA-  174 (396)
Q Consensus       100 ~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p--~~~~-  174 (396)
                      +|+.....  ..++.+.+++|+.|+.+|+++|++.+  . +++++||..+|       |..  ...+.+|+..  ..|. 
T Consensus       190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~-r~V~~SS~~VY-------g~~--~~~p~~E~~~~~~~P~~  257 (442)
T PLN02206        190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--A-RFLLTSTSEVY-------GDP--LQHPQVETYWGNVNPIG  257 (442)
T ss_pred             eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--C-EEEEECChHHh-------CCC--CCCCCCccccccCCCCC
Confidence            99864332  22567888999999999999999875  3 67777765555       321  1345566531  1121 


Q ss_pred             CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC-cchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 016047          175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI  248 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~  248 (396)
                      +...|+.     |+++..+. +.++++++++||+++||+.... .......+.   . ....+.++.++|++.+.+.++|
T Consensus       258 ~~s~Y~~SK~~aE~~~~~y~-~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i---~-~~l~~~~i~i~g~G~~~rdfi~  332 (442)
T PLN02206        258 VRSCYDEGKRTAETLTMDYH-RGANVEVRIARIFNTYGPRMCIDDGRVVSNFV---A-QALRKEPLTVYGDGKQTRSFQF  332 (442)
T ss_pred             ccchHHHHHHHHHHHHHHHH-HHhCCCeEEEEeccccCCCCCccccchHHHHH---H-HHHcCCCcEEeCCCCEEEeEEe
Confidence            1223653     66666554 5678999999999999954221 112222221   1 1112556677888888888888


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHH
Q 016047          249 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW  328 (396)
Q Consensus       249 ~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (396)
                      +.|+   |++++.++...  .+++|||+++..+|++|+++.+++.+|.+.....          .+.             
T Consensus       333 V~Dv---a~ai~~a~e~~--~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~----------~p~-------------  384 (442)
T PLN02206        333 VSDL---VEGLMRLMEGE--HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEF----------RPN-------------  384 (442)
T ss_pred             HHHH---HHHHHHHHhcC--CCceEEEcCCCceeHHHHHHHHHHHhCCCCceee----------CCC-------------
Confidence            7776   77777766432  3568999999999999999999999985432100          000             


Q ss_pred             HHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          329 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       329 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                               ....     .+          ...+|++|+++ +||+|+++++|+|+++++|+++
T Consensus       385 ---------~~~~-----~~----------~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~  424 (442)
T PLN02206        385 ---------TEDD-----PH----------KRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQ  424 (442)
T ss_pred             ---------CCCC-----cc----------ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence                     0000     00          23479999997 6999999999999999999975

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1.4e-32  Score=282.69  Aligned_cols=303  Identities=15%  Similarity=0.135  Sum_probs=212.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC-C------CCCCCCeeEEEecCCChHHHHHHH--hcC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-N------WNADHLVEYVQCDVSDPEETQAKL--SQL   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-~------~~~~~~v~~~~~Dl~d~~~~~~~~--~~~   94 (396)
                      .+|+|||||||||||++|+++|++..   .+++|++++|.... .      ....++++++.+|+.|.+.+..++  .++
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g---~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   81 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNY---PDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGI   81 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhC---CCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence            45799999999999999999999821   26899999985311 0      011247899999999998887665  568


Q ss_pred             CCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC
Q 016047           95 TDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL  172 (396)
Q Consensus        95 ~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~  172 (396)
                      |.|+|+|+......  .++.+.+++|+.||.+++++|++.+ .+++++++||..+|+.+.   .   ....+..|+.+..
T Consensus        82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~~vyg~~~---~---~~~~~~~E~~~~~  154 (668)
T PLN02260         82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETD---E---DADVGNHEASQLL  154 (668)
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHHhCCCc---c---ccccCccccCCCC
Confidence            89999988644322  2456778999999999999999864 478899888766554321   0   0012235666655


Q ss_pred             CCCCcchh-----HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 016047          173 DAPNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  246 (396)
Q Consensus       173 ~~~~~~y~-----~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  246 (396)
                      |...  |+     .|+++..+. ++.+++++++||++|||  |+... .+...+.   . ....+.++.+.|++.+.+++
T Consensus       155 p~~~--Y~~sK~~aE~~v~~~~-~~~~l~~vilR~~~VyG--p~~~~~~~i~~~~---~-~a~~g~~i~i~g~g~~~r~~  225 (668)
T PLN02260        155 PTNP--YSATKAGAEMLVMAYG-RSYGLPVITTRGNNVYG--PNQFPEKLIPKFI---L-LAMQGKPLPIHGDGSNVRSY  225 (668)
T ss_pred             CCCC--cHHHHHHHHHHHHHHH-HHcCCCEEEECcccccC--cCCCcccHHHHHH---H-HHhCCCCeEEecCCCceEee
Confidence            5444  54     366666654 56789999999999999  44322 2222221   1 11135566777888888888


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchH
Q 016047          247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  326 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (396)
                      +|+.|+   |++++.++.. ...+++||+++++.+|+.|+++.+++.+|.+....             +.          
T Consensus       226 ihV~Dv---a~a~~~~l~~-~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~-------------i~----------  278 (668)
T PLN02260        226 LYCEDV---AEAFEVVLHK-GEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKS-------------IK----------  278 (668)
T ss_pred             EEHHHH---HHHHHHHHhc-CCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcce-------------ee----------
Confidence            888887   6666655543 44578999999999999999999999999653210             00          


Q ss_pred             HHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCC
Q 016047          327 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKI  394 (396)
Q Consensus       327 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~  394 (396)
                              + ....++.             ...+..|++|++++||+|+++++|+|+++++|+++.+.
T Consensus       279 --------~-~~~~p~~-------------~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~~  324 (668)
T PLN02260        279 --------F-VENRPFN-------------DQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNPD  324 (668)
T ss_pred             --------e-cCCCCCC-------------cceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhChh
Confidence                    0 0000110             01345799999999999999999999999999987653

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3.2e-32  Score=256.96  Aligned_cols=301  Identities=19%  Similarity=0.202  Sum_probs=204.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---------CCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +|+||||||+||||++|+++|++     +|++|++++|++....         ....+++++.+|++|++++.++++++|
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d   79 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLF-----RGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCE   79 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCC
Confidence            47999999999999999999999     8999999988764310         011368899999999999999999999


Q ss_pred             CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      .|+|+|+......  .++...+++|+.|+.+++++|.+.. ..++|+++||...|+.+....+    ...+++|+.+..|
T Consensus        80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~-~~~~iv~~SS~~~~~~~~~~~~----~~~~~~E~~~~~p  154 (325)
T PLN02989         80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVS-SVKRVILTSSMAAVLAPETKLG----PNDVVDETFFTNP  154 (325)
T ss_pred             EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecchhheecCCccCC----CCCccCcCCCCch
Confidence            9999988543221  2456788999999999999998752 3568888887655533210011    1346788877654


Q ss_pred             C----CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047          174 A----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  244 (396)
Q Consensus       174 ~----~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  244 (396)
                      .    +...|+.     |+++..+. ++.+++++++||+++||+......++...+  ...+..  +.+. + +  .+.+
T Consensus       155 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~--i~~~~~--~~~~-~-~--~~~r  225 (325)
T PLN02989        155 SFAEERKQWYVLSKTLAEDAAWRFA-KDNEIDLIVLNPGLVTGPILQPTLNFSVAV--IVELMK--GKNP-F-N--TTHH  225 (325)
T ss_pred             hHhcccccchHHHHHHHHHHHHHHH-HHcCCeEEEEcCCceeCCCCCCCCCchHHH--HHHHHc--CCCC-C-C--CcCc
Confidence            3    1233654     55555554 567899999999999995432222222112  111111  2221 1 2  2334


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047          245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  324 (396)
Q Consensus       245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (396)
                      .++|+.|+   |++++.++..+.. +++||++ +..+|++|+++.+.+.++......           .           
T Consensus       226 ~~i~v~Dv---a~a~~~~l~~~~~-~~~~ni~-~~~~s~~ei~~~i~~~~~~~~~~~-----------~-----------  278 (325)
T PLN02989        226 RFVDVRDV---ALAHVKALETPSA-NGRYIID-GPVVTIKDIENVLREFFPDLCIAD-----------R-----------  278 (325)
T ss_pred             CeeEHHHH---HHHHHHHhcCccc-CceEEEe-cCCCCHHHHHHHHHHHCCCCCCCC-----------C-----------
Confidence            66666665   7887777665433 5689995 568999999999999986321100           0           


Q ss_pred             hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCC
Q 016047          325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~  395 (396)
                                    +..... .         ...+...|++|++++||+|+++++++|+++++|+++.|.+
T Consensus       279 --------------~~~~~~-~---------~~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~~  325 (325)
T PLN02989        279 --------------NEDITE-L---------NSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCLV  325 (325)
T ss_pred             --------------CCCccc-c---------cccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence                          000000 0         0003457999999999999999999999999999988763

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.1e-32  Score=257.92  Aligned_cols=298  Identities=17%  Similarity=0.176  Sum_probs=200.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +++|||||||||||++|+++|++     +||+|++++|+....        .. ..++++++.+|++|++.+.++++++|
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQ-----RGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCE   78 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHH-----CCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCC
Confidence            47899999999999999999999     899999999875421        00 12468899999999999999999999


Q ss_pred             CeeEEEEeccCCCccH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC-CCCCCccCCCCCCC
Q 016047           96 DVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-PYDPPFTEDMPRLD  173 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~~p~~E~~p~~~  173 (396)
                      .|+|+|+.......++ ...+++|+.|+.+++++|++. .++++++++||...+     .|+... ....+++|+.+..|
T Consensus        79 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~v~~SS~~~~-----~y~~~~~~~~~~~~E~~~~~p  152 (322)
T PLN02662         79 GVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV-PSVKRVVVTSSMAAV-----AYNGKPLTPDVVVDETWFSDP  152 (322)
T ss_pred             EEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCCEEEEccCHHHh-----cCCCcCCCCCCcCCcccCCCh
Confidence            9999987543222334 367899999999999999875 237788888764321     233211 11346778766544


Q ss_pred             C----CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047          174 A----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  244 (396)
Q Consensus       174 ~----~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  244 (396)
                      .    ....|+.     |+++..+. ++.+++++++||+++||+......+....+  ...+..  +.+ .++   .+.+
T Consensus       153 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~--~~~~~~--~~~-~~~---~~~~  223 (322)
T PLN02662        153 AFCEESKLWYVLSKTLAEEAAWKFA-KENGIDMVTINPAMVIGPLLQPTLNTSAEA--ILNLIN--GAQ-TFP---NASY  223 (322)
T ss_pred             hHhhcccchHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCcccCCCCCCCCCchHHH--HHHHhc--CCc-cCC---CCCc
Confidence            2    1123664     44444444 567899999999999995322211211111  111111  222 122   2345


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047          245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  324 (396)
Q Consensus       245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (396)
                      +++|+.|+   |++++.++..+.. ++.||++ +..+|++|+++.+.+.++....+              ...       
T Consensus       224 ~~i~v~Dv---a~a~~~~~~~~~~-~~~~~~~-g~~~s~~e~~~~i~~~~~~~~~~--------------~~~-------  277 (322)
T PLN02662        224 RWVDVRDV---ANAHIQAFEIPSA-SGRYCLV-ERVVHYSEVVKILHELYPTLQLP--------------EKC-------  277 (322)
T ss_pred             CeEEHHHH---HHHHHHHhcCcCc-CCcEEEe-CCCCCHHHHHHHHHHHCCCCCCC--------------CCC-------
Confidence            66666665   7887777765443 3468887 57899999999999987632111              000       


Q ss_pred             hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCC
Q 016047          325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~  395 (396)
                                .  ...+.              .....+|++|++++||++ ++++++|+++++||+++|++
T Consensus       278 ----------~--~~~~~--------------~~~~~~d~~k~~~lg~~~-~~~~~~l~~~~~~~~~~~~~  321 (322)
T PLN02662        278 ----------A--DDKPY--------------VPTYQVSKEKAKSLGIEF-IPLEVSLKDTVESLKEKGFL  321 (322)
T ss_pred             ----------C--Ccccc--------------ccccccChHHHHHhCCcc-ccHHHHHHHHHHHHHHcCCC
Confidence                      0  00000              012347999999999996 79999999999999999986

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-32  Score=238.58  Aligned_cols=302  Identities=17%  Similarity=0.144  Sum_probs=217.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC---CC-C---CCCCCCeeEEEecCCChHHHHHHHh--cCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP---KP-N---WNADHLVEYVQCDVSDPEETQAKLS--QLTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~---~~-~---~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~   96 (396)
                      +++|||||+||||++.+..+..++   ..++.++++.-.   .. .   ....++..++++|+.+...+.-.+.  .+|.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~---p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~   83 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKY---PDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT   83 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCC---CCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence            799999999999999999999865   345666666421   11 1   1124688999999999887766554  3667


Q ss_pred             eeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           97 VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        97 V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      |+|.|+.......  ++.+....|+.+|+.||++++..+ ++++|+++|+..+||.+.       . .....|.+++.|.
T Consensus        84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~-------~-~~~~~E~s~~nPt  154 (331)
T KOG0747|consen   84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSD-------E-DAVVGEASLLNPT  154 (331)
T ss_pred             hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCcc-------c-cccccccccCCCC
Confidence            9999887665433  778889999999999999999875 699999888766665432       1 1122266666666


Q ss_pred             CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 016047          175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI  248 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~  248 (396)
                      .+  |+.     |..++.+. ++++++++++|.++|||  |+... .....|   +.+.. .+.+.++.|++.+.+++++
T Consensus       155 np--yAasKaAaE~~v~Sy~-~sy~lpvv~~R~nnVYG--P~q~~~klipkF---i~l~~-~~~~~~i~g~g~~~rs~l~  225 (331)
T KOG0747|consen  155 NP--YAASKAAAEMLVRSYG-RSYGLPVVTTRMNNVYG--PNQYPEKLIPKF---IKLAM-RGKEYPIHGDGLQTRSYLY  225 (331)
T ss_pred             Cc--hHHHHHHHHHHHHHHh-hccCCcEEEEeccCccC--CCcChHHHhHHH---HHHHH-hCCCcceecCcccceeeEe
Confidence            55  553     55666665 89999999999999999  66432 222222   22222 3667788999999999999


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHH
Q 016047          249 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW  328 (396)
Q Consensus       249 ~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (396)
                      +.|+   ++++..++ .++..|++|||+++...+.-|+++.+.+.++..-+..+.         .|.  ..++       
T Consensus       226 veD~---~ea~~~v~-~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~---------~p~--~~~v-------  283 (331)
T KOG0747|consen  226 VEDV---SEAFKAVL-EKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDT---------EPF--IFFV-------  283 (331)
T ss_pred             HHHH---HHHHHHHH-hcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCC---------CCc--ceec-------
Confidence            9997   55544444 447779999999999999999999999998765432111         000  0000       


Q ss_pred             HHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhC
Q 016047          329 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       329 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                               ...+.             +..++..|.+|+|.|||+|+++.++||+.+|+||.++
T Consensus       284 ---------~dRp~-------------nd~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~  325 (331)
T KOG0747|consen  284 ---------EDRPY-------------NDLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN  325 (331)
T ss_pred             ---------CCCCc-------------ccccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence                     00111             1116778999999999999999999999999999764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4.9e-32  Score=255.35  Aligned_cols=298  Identities=17%  Similarity=0.175  Sum_probs=201.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C----CCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W----NADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~----~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +++|||||||||||++++++|++     .||+|++++|+....     .    ....+++++.+|++|++.+.++++++|
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   79 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLL-----RGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCD   79 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCC
Confidence            47999999999999999999999     899999999875431     0    012468899999999999999999999


Q ss_pred             CeeEEEEeccCCCcc-HHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC-CCCCCccCCCCCCC
Q 016047           96 DVTHIFYVTWTNRST-EAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK-PYDPPFTEDMPRLD  173 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~-~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~~p~~E~~p~~~  173 (396)
                      .|+|+|+.......+ ....+++|+.|+.+++++|++. ..+++|+++||...|     .|+... ....+++|+.+..|
T Consensus        80 ~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~-----~~~~~~~~~~~~~~E~~~~~p  153 (322)
T PLN02986         80 AVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAV-----LFRQPPIEANDVVDETFFSDP  153 (322)
T ss_pred             EEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhhe-----ecCCccCCCCCCcCcccCCCh
Confidence            999998753322223 3456899999999999999874 247889988876543     122110 11345667664333


Q ss_pred             C----CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047          174 A----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  244 (396)
Q Consensus       174 ~----~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  244 (396)
                      .    +...|+.     |+++.++. ++++++++++||++|||+......++...+.  .....  +.++  .+  .+.+
T Consensus       154 ~~~~~~~~~Y~~sK~~aE~~~~~~~-~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~--~~~~~--g~~~--~~--~~~~  224 (322)
T PLN02986        154 SLCRETKNWYPLSKILAENAAWEFA-KDNGIDMVVLNPGFICGPLLQPTLNFSVELI--VDFIN--GKNL--FN--NRFY  224 (322)
T ss_pred             HHhhccccchHHHHHHHHHHHHHHH-HHhCCeEEEEcccceeCCCCCCCCCccHHHH--HHHHc--CCCC--CC--CcCc
Confidence            1    2233653     56666665 5679999999999999954222212211111  11111  3332  22  3345


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047          245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  324 (396)
Q Consensus       245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (396)
                      .++|+.|+   |++++.++..+.. +++||++ +..+|++|+++.+.+.++.. . ++            ..        
T Consensus       225 ~~v~v~Dv---a~a~~~al~~~~~-~~~yni~-~~~~s~~e~~~~i~~~~~~~-~-~~------------~~--------  277 (322)
T PLN02986        225 RFVDVRDV---ALAHIKALETPSA-NGRYIID-GPIMSVNDIIDILRELFPDL-C-IA------------DT--------  277 (322)
T ss_pred             ceeEHHHH---HHHHHHHhcCccc-CCcEEEe-cCCCCHHHHHHHHHHHCCCC-C-CC------------CC--------
Confidence            56666665   8888887776544 3589995 56899999999999998621 1 10            00        


Q ss_pred             hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCC
Q 016047          325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~  395 (396)
                                  .++.....             ....+|++|+++|||+|+ +++|+|+++++|+++.|+|
T Consensus       278 ------------~~~~~~~~-------------~~~~~d~~~~~~lg~~~~-~l~e~~~~~~~~~~~~~~~  322 (322)
T PLN02986        278 ------------NEESEMNE-------------MICKVCVEKVKNLGVEFT-PMKSSLRDTILSLKEKCLL  322 (322)
T ss_pred             ------------Cccccccc-------------cCCccCHHHHHHcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence                        00000000             012369999999999985 9999999999999999976

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=6.2e-32  Score=257.86  Aligned_cols=303  Identities=17%  Similarity=0.141  Sum_probs=207.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------C--CCCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W--NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~--~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ++++|||||||||||++|+++|++     .|++|++++|.....         .  ....+++++.+|++|++.+.+++.
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~   78 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLL-----AGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFA   78 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHH
Confidence            458999999999999999999998     799999998753211         0  012367899999999999988886


Q ss_pred             --cCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           93 --QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                        ++|.|+|+|+.....  ..++...+++|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|+
T Consensus        79 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~vy-------g~~--~~~~~~E~  147 (352)
T PLN02240         79 STRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG--CKKLVFSSSATVY-------GQP--EEVPCTEE  147 (352)
T ss_pred             hCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHh-------CCC--CCCCCCCC
Confidence              578899998753221  22567789999999999999998754  6788888765544       321  24578888


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-----hhHHHHHHH-HHHhhhcCCCceec
Q 016047          169 MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-----NLVGALCVY-AAVCKHEGIPLRFP  237 (396)
Q Consensus       169 ~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~-~~i~~~~~~~~~~~  237 (396)
                      .|..+...  |+.     |+++..+.....+++++++|++++||+.+....     .....+..+ ..+..+...++.+.
T Consensus       148 ~~~~~~~~--Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PLN02240        148 FPLSATNP--YGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVF  225 (352)
T ss_pred             CCCCCCCH--HHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEe
Confidence            87766443  664     555555432345789999999999996542110     000111111 11222222233333


Q ss_pred             C------CccccceeeecccHHHHHHHHHHHhcC----CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhc
Q 016047          238 G------TKAAWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEE  307 (396)
Q Consensus       238 g------~~~~~~~~~~~~da~~la~~~i~~~~~----~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~  307 (396)
                      |      ++.+.+.++|+.|+   |++++.++..    +...+++||+++++.+|++|+++.+++.+|.+.+...     
T Consensus       226 g~~~~~~~g~~~~~~i~v~D~---a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~-----  297 (352)
T PLN02240        226 GNDYPTKDGTGVRDYIHVMDL---ADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKL-----  297 (352)
T ss_pred             CCCCCCCCCCEEEeeEEHHHH---HHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCcee-----
Confidence            3      55666777877776   5655554432    2344689999999999999999999999986543210     


Q ss_pred             CCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHH
Q 016047          308 GGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWI  386 (396)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~  386 (396)
                             .+                    ..+...               ..+.+|++|+++ +||+|+++++++|++++
T Consensus       298 -------~~--------------------~~~~~~---------------~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~  335 (352)
T PLN02240        298 -------AP--------------------RRPGDA---------------EEVYASTEKAEKELGWKAKYGIDEMCRDQW  335 (352)
T ss_pred             -------CC--------------------CCCCCh---------------hhhhcCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence                   00                    000000               023469999986 69999999999999999


Q ss_pred             HHHhhCCC
Q 016047          387 DKVKGFKI  394 (396)
Q Consensus       387 ~~~~~~~~  394 (396)
                      +|+++++.
T Consensus       336 ~~~~~~~~  343 (352)
T PLN02240        336 NWASKNPY  343 (352)
T ss_pred             HHHHhCcc
Confidence            99998764

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=5.8e-32  Score=257.80  Aligned_cols=299  Identities=15%  Similarity=0.136  Sum_probs=196.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------C-CCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------N-ADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~-~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +++|||||||||||++|+++|++     +|++|++++|++....        . ...+++++.+|+.|++.+.++++++|
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d   79 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLE-----RGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT   79 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHH-----CCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence            46899999999999999999999     8999999998753320        0 01257889999999999999999999


Q ss_pred             CeeEEEEeccCCCcc-HHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCC-ccCCCCC--
Q 016047           96 DVTHIFYVTWTNRST-EAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP-FTEDMPR--  171 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~-~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p-~~E~~p~--  171 (396)
                      .|+|+|+.......+ ....+++|+.||.+++++|++.+ .+++|+++||...|+..        +...+ ++|+...  
T Consensus        80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~r~v~~SS~~~~~~~--------~~~~~~~~E~~~~~~  150 (351)
T PLN02650         80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAK-TVRRIVFTSSAGTVNVE--------EHQKPVYDEDCWSDL  150 (351)
T ss_pred             EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcC-CceEEEEecchhhcccC--------CCCCCccCcccCCch
Confidence            999998753322223 34678999999999999998863 26788888765444221        01122 3444211  


Q ss_pred             -----CCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047          172 -----LDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  241 (396)
Q Consensus       172 -----~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  241 (396)
                           .+.+...|+.     |.++..+. ++++++++++||++|||+..+..  ....+...+.  ...+.... .+.. 
T Consensus       151 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilRp~~v~Gp~~~~~--~~~~~~~~~~--~~~~~~~~-~~~~-  223 (351)
T PLN02650        151 DFCRRKKMTGWMYFVSKTLAEKAAWKYA-AENGLDFISIIPTLVVGPFISTS--MPPSLITALS--LITGNEAH-YSII-  223 (351)
T ss_pred             hhhhccccccchHHHHHHHHHHHHHHHH-HHcCCeEEEECCCceECCCCCCC--CCccHHHHHH--HhcCCccc-cCcC-
Confidence                 0111223664     55555554 66799999999999999543221  1111111111  11121111 1211 


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHh
Q 016047          242 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  321 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (396)
                      +.+.++|+.|+   |++++.++..+.. ++.| ++++..+|++|+++.+.+.++....+            ..+.     
T Consensus       224 ~~r~~v~V~Dv---a~a~~~~l~~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~------------~~~~-----  281 (351)
T PLN02650        224 KQGQFVHLDDL---CNAHIFLFEHPAA-EGRY-ICSSHDATIHDLAKMLREKYPEYNIP------------ARFP-----  281 (351)
T ss_pred             CCcceeeHHHH---HHHHHHHhcCcCc-CceE-EecCCCcCHHHHHHHHHHhCcccCCC------------CCCC-----
Confidence            22466666665   7887777765433 3478 45667899999999999987622111            0000     


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047          322 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  396 (396)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~  396 (396)
                                    + .+...               .....|++|++++||+|+++++++|+++++|+++.+++|
T Consensus       282 --------------~-~~~~~---------------~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~  326 (351)
T PLN02650        282 --------------G-IDEDL---------------KSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP  326 (351)
T ss_pred             --------------C-cCccc---------------ccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence                          0 00000               023469999988999999999999999999999999875

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=2e-32  Score=256.33  Aligned_cols=289  Identities=13%  Similarity=0.152  Sum_probs=186.2

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH---HH-HHHHh-----cCCCee
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE---ET-QAKLS-----QLTDVT   98 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~---~~-~~~~~-----~~~~V~   98 (396)
                      |||||||||||++|+++|++     .|++|+++.|+.....   ...++..+|+.|..   ++ .+++.     ++|.|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~-----~g~~~v~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi   73 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGT---KFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF   73 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHh-----CCCceEEEecCCCcch---HHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence            89999999999999999999     7998777766543211   11123456666543   32 33332     578899


Q ss_pred             EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcc
Q 016047           99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  178 (396)
Q Consensus        99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~  178 (396)
                      |+|+.......++...++.|+.++.+|+++|++.+  + +++++||..+|       |..  ...+.+|+.+..|...  
T Consensus        74 h~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~--~-~~i~~SS~~vy-------g~~--~~~~~~E~~~~~p~~~--  139 (308)
T PRK11150         74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--I-PFLYASSAATY-------GGR--TDDFIEEREYEKPLNV--  139 (308)
T ss_pred             ECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC--C-cEEEEcchHHh-------CcC--CCCCCccCCCCCCCCH--
Confidence            99985433222455678999999999999999864  4 47777765544       431  1235667666555443  


Q ss_pred             hhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHH-HHhhhcCC-CceecCCccccceeeeccc
Q 016047          179 YTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYA-AVCKHEGI-PLRFPGTKAAWECYSIASD  251 (396)
Q Consensus       179 y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~i~~~~~~-~~~~~g~~~~~~~~~~~~d  251 (396)
                      |+.     |+++.++. .+.+++++++||++|||++......+...+..+. .+.+  +. +..+.|++...+.++|+.|
T Consensus       140 Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~g~~~~~r~~i~v~D  216 (308)
T PRK11150        140 YGYSKFLFDEYVRQIL-PEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNN--GENPKLFEGSENFKRDFVYVGD  216 (308)
T ss_pred             HHHHHHHHHHHHHHHH-HHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhc--CCCCEEecCCCceeeeeeeHHH
Confidence            664     56666554 5568999999999999954322111111111111 1222  33 3344566666677777777


Q ss_pred             HHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHH
Q 016047          252 ADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEI  331 (396)
Q Consensus       252 a~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (396)
                      +   |.+++.++...  .+++||++++..+|+.|+++.+.+.+|......           .+.                
T Consensus       217 ~---a~a~~~~~~~~--~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~-----------~~~----------------  264 (308)
T PRK11150        217 V---AAVNLWFWENG--VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEY-----------IPF----------------  264 (308)
T ss_pred             H---HHHHHHHHhcC--CCCeEEcCCCCceeHHHHHHHHHHHhCCCccee-----------ccC----------------
Confidence            6   66666665432  357999999999999999999999998421110           000                


Q ss_pred             HHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCcc-ccCHHHHHHHHHHHh
Q 016047          332 VRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGF-RNSKNSFITWIDKVK  390 (396)
Q Consensus       332 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~-~~~~~~~~~~~~~~~  390 (396)
                             +.....  .       +. .....|++|++++||+|+ .+++++|+++++|+.
T Consensus       265 -------~~~~~~--~-------~~-~~~~~d~~k~~~~g~~p~~~~~~~gl~~~~~~~~  307 (308)
T PRK11150        265 -------PDKLKG--R-------YQ-AFTQADLTKLRAAGYDKPFKTVAEGVAEYMAWLN  307 (308)
T ss_pred             -------cccccc--c-------cc-eecccCHHHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence                   000000  0       00 023479999999999987 599999999999975

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.4e-31  Score=254.86  Aligned_cols=298  Identities=15%  Similarity=0.099  Sum_probs=201.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHhcC--CC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQL--TD   96 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~~--~~   96 (396)
                      +|+|||||||||||++++++|++     +|++|++++|++....      ....+++++.+|++|.+++.++++.+  |.
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~   78 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLE-----LGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEI   78 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHH-----CCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence            57999999999999999999999     8999999998764321      01235778999999999999988864  78


Q ss_pred             eeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           97 VTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        97 V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      |+|+|+......  .++...+++|+.++.+++++|++.+ .+++++++||..+|+..        ....+++|+.+..|.
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~iv~~SS~~vyg~~--------~~~~~~~e~~~~~p~  149 (349)
T TIGR02622        79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIG-SVKAVVNVTSDKCYRND--------EWVWGYRETDPLGGH  149 (349)
T ss_pred             EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcC-CCCEEEEEechhhhCCC--------CCCCCCccCCCCCCC
Confidence            999987543322  2567788999999999999998753 25688888765555321        012356777665554


Q ss_pred             CCcchhH-----HHHHHHHhhcC-------CCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          175 PNFYYTL-----EDILFEEVEKK-------EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~~-------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                      ..  |+.     |.++..+. ++       .+++++++||+++||++......+...+   +... ..+.++.+ +++.+
T Consensus       150 ~~--Y~~sK~~~e~~~~~~~-~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~---~~~~-~~g~~~~~-~~g~~  221 (349)
T TIGR02622       150 DP--YSSSKACAELVIASYR-SSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDV---IRAF-SSNKIVII-RNPDA  221 (349)
T ss_pred             Cc--chhHHHHHHHHHHHHH-HHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHH---HHHH-hcCCCeEE-CCCCc
Confidence            44  553     55554443 22       3899999999999994321111222222   1111 12445444 45677


Q ss_pred             cceeeecccHHHHHHHHHHHhcC----CCCCCceeeecCC--CeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCC
Q 016047          243 WECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNG--DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK  316 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~----~~~~g~~~ni~~~--~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  316 (396)
                      .+.++|+.|+   +.+++.++..    +...+++|||+++  ..+|+.|+++.+.+.++.....+..         .+. 
T Consensus       222 ~rd~i~v~D~---a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~---------~~~-  288 (349)
T TIGR02622       222 TRPWQHVLEP---LSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWED---------DSD-  288 (349)
T ss_pred             ccceeeHHHH---HHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceee---------ccC-
Confidence            7888888776   5666555432    1233679999975  6899999999999887632211100         000 


Q ss_pred             HHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          317 LAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                                         ...+...               .....|++|+++ +||+|+++++++|+++++|+++
T Consensus       289 -------------------~~~~~~~---------------~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~  330 (349)
T TIGR02622       289 -------------------LNHPHEA---------------RLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKA  330 (349)
T ss_pred             -------------------CCCCccc---------------ceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence                               0000000               024579999987 6999999999999999999875

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=2.4e-31  Score=252.38  Aligned_cols=299  Identities=15%  Similarity=0.102  Sum_probs=201.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHh--cCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--QLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~--~~~   95 (396)
                      |+|||||||||||++|+++|++     +|++|++++|......        ....++.++.+|++|++.+.+++.  ++|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   75 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQ-----NGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAID   75 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHH-----CCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCC
Confidence            4799999999999999999999     8999999987532110        012356788999999999988886  478


Q ss_pred             CeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC-C
Q 016047           96 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR-L  172 (396)
Q Consensus        96 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~-~  172 (396)
                      .|+|+|+.....  ...+.+.+++|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|++|. .
T Consensus        76 ~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~y-------g~~--~~~~~~E~~~~~~  144 (338)
T PRK10675         76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNLIFSSSATVY-------GDQ--PKIPYVESFPTGT  144 (338)
T ss_pred             EEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHhh-------CCC--CCCccccccCCCC
Confidence            899998754322  12456788999999999999999864  6788887765544       421  24567888775 3


Q ss_pred             CCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcch-----hHHHHHHH-HHHhhhcCCCceecC---
Q 016047          173 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN-----LVGALCVY-AAVCKHEGIPLRFPG---  238 (396)
Q Consensus       173 ~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~-~~i~~~~~~~~~~~g---  238 (396)
                      |..  .|+.     |+++.++.....+++++++|++++||+.|...+.     ....+..+ ..+..+...++...|   
T Consensus       145 p~~--~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (338)
T PRK10675        145 PQS--PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_pred             CCC--hhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcC
Confidence            433  3653     6666665312347999999999999965432110     01111111 111211112222222   


Q ss_pred             ---CccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcc
Q 016047          239 ---TKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQ  313 (396)
Q Consensus       239 ---~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~  313 (396)
                         ++.+.++++|+.|+   |++++.++..  ....+++||+++++.+|++|+++.+.+.+|.+.....           
T Consensus       223 ~~~~g~~~~~~v~v~D~---a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-----------  288 (338)
T PRK10675        223 PTEDGTGVRDYIHVMDL---ADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHF-----------  288 (338)
T ss_pred             CCCCCcEEEeeEEHHHH---HHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeee-----------
Confidence               45566677777776   6666666543  2234689999999999999999999999997542210           


Q ss_pred             cCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          314 RVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                       .+.                    .+...               ....+|++|+++ +||+|+++++++|+++++|+++.
T Consensus       289 -~~~--------------------~~~~~---------------~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        289 -APR--------------------REGDL---------------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             -CCC--------------------CCCch---------------hhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence             000                    00000               023479999986 59999999999999999999863

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=2.9e-31  Score=253.24  Aligned_cols=309  Identities=15%  Similarity=0.118  Sum_probs=205.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCC-CC------CCCCCCeeEEEecCCChHHHHHHHhc--CC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK-PN------WNADHLVEYVQCDVSDPEETQAKLSQ--LT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~-~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~   95 (396)
                      |+|||||||||||++|+++|++     +|++ |++++|... ..      .....+++++.+|++|.+++.+++..  +|
T Consensus         1 mkilITGgtG~iG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   75 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIIN-----NTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPD   75 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHH-----hCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCC
Confidence            4799999999999999999998     6765 666665431 10      00123577899999999999998875  78


Q ss_pred             CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccC-------CCcceEEEeccceeecccccccccCC-CCC-CC
Q 016047           96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA-------PNLRHVCLQTGTKHYLGPFEAFGKIK-PYD-PP  164 (396)
Q Consensus        96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~-------~~~~~~~~~s~~~~y~ss~~~~g~~~-~~~-~p  164 (396)
                      .|+|+|+......  .++.+.+++|+.|+.+++++|++..       .++++++++||..+|+..... .... ... .+
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~-~~~~~~~~~~~  154 (352)
T PRK10084         76 AVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHP-DEVENSEELPL  154 (352)
T ss_pred             EEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcc-ccccccccCCC
Confidence            8999998643321  2467789999999999999998641       235678888776656421000 0000 001 23


Q ss_pred             ccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcCCCceecC
Q 016047          165 FTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPG  238 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g  238 (396)
                      ++|+.+..|...  |+.     |+++..+. +.++++++++||+.|||  |+... .+...+..  ..  ..+.++.+.|
T Consensus       155 ~~E~~~~~p~~~--Y~~sK~~~E~~~~~~~-~~~g~~~vilr~~~v~G--p~~~~~~~~~~~~~--~~--~~~~~~~~~~  225 (352)
T PRK10084        155 FTETTAYAPSSP--YSASKASSDHLVRAWL-RTYGLPTIVTNCSNNYG--PYHFPEKLIPLVIL--NA--LEGKPLPIYG  225 (352)
T ss_pred             ccccCCCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCEEEEeccceeC--CCcCccchHHHHHH--HH--hcCCCeEEeC
Confidence            678777666544  554     55555554 56789999999999999  44321 22222211  11  1244566677


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHH
Q 016047          239 TKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLA  318 (396)
Q Consensus       239 ~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  318 (396)
                      ++.+.+.++|+.|+   |.+++.++.. ...+++||+++++.+|++|+++.+++.+|...+..             ....
T Consensus       226 ~g~~~~~~v~v~D~---a~a~~~~l~~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~-------------~~~~  288 (352)
T PRK10084        226 KGDQIRDWLYVEDH---ARALYKVVTE-GKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKA-------------TSYR  288 (352)
T ss_pred             CCCeEEeeEEHHHH---HHHHHHHHhc-CCCCceEEeCCCCcCcHHHHHHHHHHHhccccccc-------------cchh
Confidence            77777888877776   7777666554 34578999999999999999999999998642210             0000


Q ss_pred             HHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          319 EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      .              ...........            ...+.+|++|+++ +||+|+++++++|+++++|+++.
T Consensus       289 ~--------------~~~~~~~~~~~------------~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~  337 (352)
T PRK10084        289 E--------------QITYVADRPGH------------DRRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN  337 (352)
T ss_pred             h--------------hccccccCCCC------------CceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence            0              00000000000            0134579999986 79999999999999999999864

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.1e-31  Score=232.43  Aligned_cols=292  Identities=19%  Similarity=0.194  Sum_probs=207.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC------CCCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP------NWNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +..+++|+||||.||||+||++.|+.     +||+|++++.....      .+...++++.+.-|+..+     .+..+|
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~-----egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD   93 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMT-----EGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVD   93 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHh-----cCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhh
Confidence            34458999999999999999999998     89999999964322      233456777777777655     678889


Q ss_pred             CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC-
Q 016047           96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL-  172 (396)
Q Consensus        96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~-  172 (396)
                      .|+|+|+.+....  .++...+.+|+.||.+++..|++.+   +++++.|       ++++||+  +..+|..|+.... 
T Consensus        94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~---aR~l~aS-------TseVYgd--p~~hpq~e~ywg~v  161 (350)
T KOG1429|consen   94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARFLLAS-------TSEVYGD--PLVHPQVETYWGNV  161 (350)
T ss_pred             hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC---ceEEEee-------cccccCC--cccCCCcccccccc
Confidence            9999998765432  2678889999999999999999875   5556554       3447775  3466766665332 


Q ss_pred             -CC-CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 016047          173 -DA-PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  245 (396)
Q Consensus       173 -~~-~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  245 (396)
                       |. +...|..     |.++-.|. ++.|+.+.|.|+.+.||  |+..++-......+.. ..-.+.|+...|++.|.++
T Consensus       162 npigpr~cydegKr~aE~L~~~y~-k~~giE~rIaRifNtyG--Prm~~~dgrvvsnf~~-q~lr~epltv~g~G~qtRS  237 (350)
T KOG1429|consen  162 NPIGPRSCYDEGKRVAETLCYAYH-KQEGIEVRIARIFNTYG--PRMHMDDGRVVSNFIA-QALRGEPLTVYGDGKQTRS  237 (350)
T ss_pred             CcCCchhhhhHHHHHHHHHHHHhh-cccCcEEEEEeeecccC--CccccCCChhhHHHHH-HHhcCCCeEEEcCCcceEE
Confidence             22 2344664     55555554 78899999999999999  5533322111111111 1113678889999999999


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccch
Q 016047          246 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE  325 (396)
Q Consensus       246 ~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (396)
                      +.++.|+   .+.++.+..++..  +.|||+++...|+.||++++.+..|-.....                        
T Consensus       238 F~yvsD~---Vegll~Lm~s~~~--~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~------------------------  288 (350)
T KOG1429|consen  238 FQYVSDL---VEGLLRLMESDYR--GPVNIGNPGEFTMLELAEMVKELIGPVSEIE------------------------  288 (350)
T ss_pred             EEeHHHH---HHHHHHHhcCCCc--CCcccCCccceeHHHHHHHHHHHcCCCccee------------------------
Confidence            9999887   6677766654433  3399999999999999999999885332210                        


Q ss_pred             HHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          326 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       326 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                              .+.-.+.+-.               ....|++||++ |||.|+.+++|+|..++.|+++
T Consensus       289 --------~~~~~~Ddp~---------------kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~  332 (350)
T KOG1429|consen  289 --------FVENGPDDPR---------------KRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRE  332 (350)
T ss_pred             --------ecCCCCCCcc---------------ccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence                    0000011100               23469999998 5999999999999999999976

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=8.6e-31  Score=246.10  Aligned_cols=297  Identities=14%  Similarity=0.128  Sum_probs=206.4

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCC----C---CCCCCCeeEEEecCCChHHHHHHHhc--CC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKP----N---WNADHLVEYVQCDVSDPEETQAKLSQ--LT   95 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~----~---~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~   95 (396)
                      +|||||||||||++|+++|++     .|  ++|++++|....    .   ....++++++.+|++|++++.+++++  +|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILN-----EHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHH-----hCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCC
Confidence            589999999999999999998     45  789999874211    0   11123678999999999999999988  89


Q ss_pred             CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      .|+|+|+......  .++...+++|+.++.+++++|.+...+. +++++||..+|++.       . ...+++|+.+..|
T Consensus        76 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~i~~Ss~~v~g~~-------~-~~~~~~e~~~~~~  146 (317)
T TIGR01181        76 AVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEF-RFHHISTDEVYGDL-------E-KGDAFTETTPLAP  146 (317)
T ss_pred             EEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCc-eEEEeeccceeCCC-------C-CCCCcCCCCCCCC
Confidence            9999987644322  2456778999999999999998764323 57777766655432       1 1225677776655


Q ss_pred             CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 016047          174 APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI  248 (396)
Q Consensus       174 ~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~  248 (396)
                      ...  |+.     |.++..+. .+.+++++++||+.+||+... ...+...+..  .+  ..+.++++.+++.+.++++|
T Consensus       147 ~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~R~~~i~G~~~~-~~~~~~~~~~--~~--~~~~~~~~~~~g~~~~~~i~  218 (317)
T TIGR01181       147 SSP--YSASKAASDHLVRAYH-RTYGLPALITRCSNNYGPYQF-PEKLIPLMIT--NA--LAGKPLPVYGDGQQVRDWLY  218 (317)
T ss_pred             CCc--hHHHHHHHHHHHHHHH-HHhCCCeEEEEeccccCCCCC-cccHHHHHHH--HH--hcCCCceEeCCCceEEeeEE
Confidence            433  553     55555554 567899999999999994321 1122222211  11  12445666777777777777


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHH
Q 016047          249 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW  328 (396)
Q Consensus       249 ~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (396)
                      +.|+   ++++..+..+ ...+++||++++..+|++|+++.+.+.+|.+......                 .       
T Consensus       219 v~D~---a~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~-----------------~-------  270 (317)
T TIGR01181       219 VEDH---CRAIYLVLEK-GRVGETYNIGGGNERTNLEVVETILELLGKDEDLITH-----------------V-------  270 (317)
T ss_pred             HHHH---HHHHHHHHcC-CCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccc-----------------c-------
Confidence            7765   7776666544 4457899999999999999999999999864321100                 0       


Q ss_pred             HHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCCC
Q 016047          329 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       329 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~  395 (396)
                                ......            ...+.+|++|+++ +||+|+++++++++++++||++..+.
T Consensus       271 ----------~~~~~~------------~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~  316 (317)
T TIGR01181       271 ----------EDRPGH------------DRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEWW  316 (317)
T ss_pred             ----------CCCccc------------hhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhccCC
Confidence                      000000            0023479999985 69999999999999999999987763

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=2.6e-31  Score=248.54  Aligned_cols=282  Identities=15%  Similarity=0.126  Sum_probs=194.5

Q ss_pred             EEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEEeccC
Q 016047           29 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYVTWT  106 (396)
Q Consensus        29 LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~~~~~  106 (396)
                      ||||||||||++|+++|++     .|++|+++.++             ..+|+.|.+++.++++.  +|.|+|+|+....
T Consensus         1 lItGa~GfiG~~l~~~L~~-----~g~~v~~~~~~-------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~   62 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEA-----LGFTNLVLRTH-------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGG   62 (306)
T ss_pred             CcccCCCcccHHHHHHHHh-----CCCcEEEeecc-------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecc
Confidence            6999999999999999998     78887766432             15899999999988875  5789999986432


Q ss_pred             -C--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC----CCCCCCcch
Q 016047          107 -N--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP----RLDAPNFYY  179 (396)
Q Consensus       107 -~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p----~~~~~~~~y  179 (396)
                       .  ..++.+.+++|+.++.+|+++|++.+  +++++++||..+|+..         ...|++|+++    ..|... .|
T Consensus        63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~SS~~vyg~~---------~~~~~~E~~~~~~~~~p~~~-~Y  130 (306)
T PLN02725         63 IHANMTYPADFIRENLQIQTNVIDAAYRHG--VKKLLFLGSSCIYPKF---------APQPIPETALLTGPPEPTNE-WY  130 (306)
T ss_pred             cchhhhCcHHHHHHHhHHHHHHHHHHHHcC--CCeEEEeCceeecCCC---------CCCCCCHHHhccCCCCCCcc-hH
Confidence             1  23456778999999999999999864  7788888876655421         2456788763    223221 26


Q ss_pred             hH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC-c--chhHHHHHHHHHHhhhcCCCcee-cCCccccceeeecc
Q 016047          180 TL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-L--MNLVGALCVYAAVCKHEGIPLRF-PGTKAAWECYSIAS  250 (396)
Q Consensus       180 ~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~-~--~~~~~~~~~~~~i~~~~~~~~~~-~g~~~~~~~~~~~~  250 (396)
                      +.     |+++..+. +..+++++++||+.|||+.... .  ......+..........+.++.+ .|++.+.++++|+.
T Consensus       131 ~~sK~~~e~~~~~~~-~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  209 (306)
T PLN02725        131 AIAKIAGIKMCQAYR-IQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVD  209 (306)
T ss_pred             HHHHHHHHHHHHHHH-HHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHH
Confidence            54     55555544 5678999999999999954221 0  11122221111011123555444 67777777777777


Q ss_pred             cHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHH
Q 016047          251 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  330 (396)
Q Consensus       251 da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (396)
                      |+   +++++.++... ..++.||++++..+|+.|+++.+++.+|.+......            .              
T Consensus       210 Dv---~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~------------~--------------  259 (306)
T PLN02725        210 DL---ADAVVFLMRRY-SGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWD------------T--------------  259 (306)
T ss_pred             HH---HHHHHHHHhcc-ccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeec------------C--------------
Confidence            76   77776666543 334679999999999999999999999864321000            0              


Q ss_pred             HHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhC
Q 016047          331 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                            ..+...               ....+|++|++++||+|+++++|+|+++++|+++.
T Consensus       260 ------~~~~~~---------------~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~  300 (306)
T PLN02725        260 ------SKPDGT---------------PRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN  300 (306)
T ss_pred             ------CCCCcc---------------cccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence                  000000               02347999999899999999999999999999865

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=4.3e-31  Score=245.89  Aligned_cols=288  Identities=13%  Similarity=0.064  Sum_probs=186.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEEe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV  103 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~~  103 (396)
                      |+||||||+||||++|+++|++     +| +|++++|...          .+.+|++|++.+.+++++  +|.|+|||+.
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~-----~g-~V~~~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~   64 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAP-----LG-NLIALDVHST----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAH   64 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhc-----cC-CEEEeccccc----------cccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            4799999999999999999998     77 6999988632          346899999999998884  7889999986


Q ss_pred             ccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          104 TWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       104 ~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      .....  .++...+++|+.++.+|+++|++.+  . +++++||..+|++.         ...|++|+++..|...  |+.
T Consensus        65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~-~~v~~Ss~~Vy~~~---------~~~p~~E~~~~~P~~~--Yg~  130 (299)
T PRK09987         65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--A-WVVHYSTDYVFPGT---------GDIPWQETDATAPLNV--YGE  130 (299)
T ss_pred             CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEccceEECCC---------CCCCcCCCCCCCCCCH--HHH
Confidence            55432  2566778999999999999999875  2 57777766655432         1457889888666544  877


Q ss_pred             HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCC--ccccceeeecccHHHHHHHH
Q 016047          182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT--KAAWECYSIASDADLIAEHQ  259 (396)
Q Consensus       182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~--~~~~~~~~~~~da~~la~~~  259 (396)
                      .|+..|........+++++||++|||+  +. .++...+.   .... .+.++.+.|+  +.+.... ++  +++++.++
T Consensus       131 sK~~~E~~~~~~~~~~~ilR~~~vyGp--~~-~~~~~~~~---~~~~-~~~~~~v~~d~~g~~~~~~-~~--~d~~~~~~  200 (299)
T PRK09987        131 TKLAGEKALQEHCAKHLIFRTSWVYAG--KG-NNFAKTML---RLAK-EREELSVINDQFGAPTGAE-LL--ADCTAHAI  200 (299)
T ss_pred             HHHHHHHHHHHhCCCEEEEecceecCC--CC-CCHHHHHH---HHHh-cCCCeEEeCCCcCCCCCHH-HH--HHHHHHHH
Confidence            666655543334457899999999994  32 13332221   1111 2445555554  2222222 22  22334444


Q ss_pred             HHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCc
Q 016047          260 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQP  339 (396)
Q Consensus       260 i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  339 (396)
                      ..++.. ...+++||+++++.+|+.|+++.+.+.++......+..      .-.+.+...               +....
T Consensus       201 ~~~~~~-~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~------~i~~~~~~~---------------~~~~~  258 (299)
T PRK09987        201 RVALNK-PEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALN------KLNAVPTSA---------------YPTPA  258 (299)
T ss_pred             HHhhcc-CCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcC------eeeecchhh---------------cCCCC
Confidence            433332 22346999999999999999999988654321100000      000111110               11000


Q ss_pred             ccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          340 TRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                         .+            -.+..+|++|+++ +||+| .+++++|+++++.+..
T Consensus       259 ---~r------------p~~~~ld~~k~~~~lg~~~-~~~~~~l~~~~~~~~~  295 (299)
T PRK09987        259 ---RR------------PHNSRLNTEKFQQNFALVL-PDWQVGVKRMLTELFT  295 (299)
T ss_pred             ---CC------------CCcccCCHHHHHHHhCCCC-ccHHHHHHHHHHHHhh
Confidence               00            0144689999998 69997 5999999999987643

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=1.1e-30  Score=246.76  Aligned_cols=319  Identities=17%  Similarity=0.133  Sum_probs=208.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      ++||||||+||||++|++.|++     .|++|++++|++.... ....+++++.+|+.|.+++.++++++|.|+|+++..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLE-----QGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHH-----CCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            4799999999999999999998     8999999999765421 122368899999999999999999999999998753


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCC-CcchhH--
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP-NFYYTL--  181 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~-~~~y~~--  181 (396)
                      .....++...+++|+.++.+++++|++.+  +++++++||..+|+..        +...+.+|+.+..+.. ...|+.  
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~--------~~~~~~~e~~~~~~~~~~~~Y~~sK  145 (328)
T TIGR03466        76 RLWAPDPEEMYAANVEGTRNLLRAALEAG--VERVVYTSSVATLGVR--------GDGTPADETTPSSLDDMIGHYKRSK  145 (328)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEechhhcCcC--------CCCCCcCccCCCCcccccChHHHHH
Confidence            32334567788999999999999998764  6788888765544321        1235678887765532 224653  


Q ss_pred             ---HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 016047          182 ---EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  258 (396)
Q Consensus       182 ---e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  258 (396)
                         |+++.++. ...+++++++||+.+||++....... ..+.  ..... ...+ .+.+.+   ..++++.|   +|++
T Consensus       146 ~~~e~~~~~~~-~~~~~~~~ilR~~~~~G~~~~~~~~~-~~~~--~~~~~-~~~~-~~~~~~---~~~i~v~D---~a~a  213 (328)
T TIGR03466       146 FLAEQAALEMA-AEKGLPVVIVNPSTPIGPRDIKPTPT-GRII--VDFLN-GKMP-AYVDTG---LNLVHVDD---VAEG  213 (328)
T ss_pred             HHHHHHHHHHH-HhcCCCEEEEeCCccCCCCCCCCCcH-HHHH--HHHHc-CCCc-eeeCCC---cceEEHHH---HHHH
Confidence               66666654 45689999999999999543222111 1111  11111 1222 222222   24555544   4777


Q ss_pred             HHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCC
Q 016047          259 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  338 (396)
Q Consensus       259 ~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  338 (396)
                      ++.++.. ...++.||++ ++.+|++|+++.+.+.+|.+.....          .+..+...+......+..   ..+..
T Consensus       214 ~~~~~~~-~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~---~~~~~  278 (328)
T TIGR03466       214 HLLALER-GRIGERYILG-GENLTLKQILDKLAEITGRPAPRVK----------LPRWLLLPVAWGAEALAR---LTGKE  278 (328)
T ss_pred             HHHHHhC-CCCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCc----------CCHHHHHHHHHHHHHHHH---hcCCC
Confidence            7766654 3457788885 6889999999999999997644321          111111111111111211   11111


Q ss_pred             cccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCC
Q 016047          339 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKI  394 (396)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~  394 (396)
                      + .+.      .....+...++.+|++|+++ +||+|. +++++|+++++||++.|.
T Consensus       279 ~-~~~------~~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~  327 (328)
T TIGR03466       279 P-RVT------VDGVRMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGY  327 (328)
T ss_pred             C-CCC------HHHHHHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCC
Confidence            1 000      00000111256689999986 699995 999999999999998875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.98  E-value=5.3e-31  Score=241.56  Aligned_cols=249  Identities=21%  Similarity=0.249  Sum_probs=173.5

Q ss_pred             EEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCCC---CCC-CCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           29 LIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW---NAD-HLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        29 LVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~---~~~-~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      |||||+||||++|+++|++     +|  ++|+++++.+....   ... ...+++++|++|++++.++++++|.|+|+|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~-----~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa   75 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLE-----RGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAA   75 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHH-----CCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCc
Confidence            7999999999999999999     77  78999998765432   111 2334899999999999999999999999998


Q ss_pred             eccCCC-ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          103 VTWTNR-STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       103 ~~~~~~-~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      ...... .+.+..+++|+.||+||+++|++.+  +++++|+||..++...  ..+.   +-...+|+.|..+.....|+.
T Consensus        76 ~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~--VkrlVytSS~~vv~~~--~~~~---~~~~~dE~~~~~~~~~~~Y~~  148 (280)
T PF01073_consen   76 PVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG--VKRLVYTSSISVVFDN--YKGD---PIINGDEDTPYPSSPLDPYAE  148 (280)
T ss_pred             cccccCcccHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcCcceeEec--cCCC---CcccCCcCCcccccccCchHH
Confidence            654433 3577789999999999999999864  8999999876655421  0010   011235555543333445775


Q ss_pred             -----HHHHHHHhhc---C--CCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeeccc
Q 016047          182 -----EDILFEEVEK---K--EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASD  251 (396)
Q Consensus       182 -----e~~l~~~~~~---~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~d  251 (396)
                           |+++.++. .   +  ..+.+++|||..|||++...........      .+ .+......|.+.....++++.+
T Consensus       149 SK~~AE~~V~~a~-~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~------~~-~g~~~~~~g~~~~~~~~vyV~N  220 (280)
T PF01073_consen  149 SKALAEKAVLEAN-GSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM------VR-SGLFLFQIGDGNNLFDFVYVEN  220 (280)
T ss_pred             HHHHHHHHHHhhc-ccccccccceeEEEEeccEEeCcccccccchhhHH------HH-hcccceeecCCCceECcEeHHH
Confidence                 55555543 1   1  2499999999999994332222221111      11 2323344565554444554444


Q ss_pred             HHHHHHHHHHHhc---C----CCCCCceeeecCCCeee-HHHHHHHHHHHhCCCCCC
Q 016047          252 ADLIAEHQIWAAV---D----PYAKNEAFNCNNGDVFK-WKHLWKVLAEQFGIEDYG  300 (396)
Q Consensus       252 a~~la~~~i~~~~---~----~~~~g~~~ni~~~~~~s-~~el~~~l~~~~g~~~~~  300 (396)
                         +|.+++.++.   +    ....|++|+|++++++. +.|++..+.+.+|.+.+.
T Consensus       221 ---vA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  221 ---VAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             ---HHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence               4777777653   1    34679999999999998 999999999999988764

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.98  E-value=1.6e-30  Score=247.95  Aligned_cols=312  Identities=14%  Similarity=0.158  Sum_probs=198.4

Q ss_pred             ccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHH
Q 016047           17 EDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        17 ~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      ++++.++. ++||||||+||||++|+++|++     +|++|++++|++...      +....+++++.+|+.|++.+.++
T Consensus         3 ~~~~~~~~-~~vLVtG~~GfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   76 (353)
T PLN02896          3 LEGRESAT-GTYCVTGATGYIGSWLVKLLLQ-----RGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEA   76 (353)
T ss_pred             ccccccCC-CEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHH
Confidence            34444443 5899999999999999999999     899999999875321      11124688999999999999999


Q ss_pred             HhcCCCeeEEEEeccCCC----ccHHH-----HHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047           91 LSQLTDVTHIFYVTWTNR----STEAE-----NCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        91 ~~~~~~V~h~a~~~~~~~----~~~~~-----~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                      +.++|.|+|+|+......    .++..     .+++|+.|+.+++++|++.. .+++|+++||..+|+... .-|.   .
T Consensus        77 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~-~~~~---~  151 (353)
T PLN02896         77 VKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKD-SNGR---W  151 (353)
T ss_pred             HcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccc-cCCC---C
Confidence            999999999998643321    12332     44566799999999998763 367888888766664210 0000   0


Q ss_pred             CCCccCCCC--CC----C-CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhh
Q 016047          162 DPPFTEDMP--RL----D-APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH  229 (396)
Q Consensus       162 ~~p~~E~~p--~~----~-~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~  229 (396)
                      ..+++|+.+  ..    + .+...|+.     |+++..+. +..+++++++||++|||+......+..  +...+...  
T Consensus       152 ~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~--~~~~~~~~--  226 (353)
T PLN02896        152 RAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYA-KENGIDLVSVITTTVAGPFLTPSVPSS--IQVLLSPI--  226 (353)
T ss_pred             CCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHH-HHcCCeEEEEcCCcccCCCcCCCCCch--HHHHHHHh--
Confidence            134556522  10    0 12223664     55666554 667899999999999995322111111  11111101  


Q ss_pred             cCCC--ceecCCccc---cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCch
Q 016047          230 EGIP--LRFPGTKAA---WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEE  304 (396)
Q Consensus       230 ~~~~--~~~~g~~~~---~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~  304 (396)
                      .+.+  ....+....   .++++|+.|+   |++++.++..+. .+++||+ ++..+|++|+++.+.+.++.....+.  
T Consensus       227 ~g~~~~~~~~~~~~~~~~~~dfi~v~Dv---a~a~~~~l~~~~-~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~--  299 (353)
T PLN02896        227 TGDSKLFSILSAVNSRMGSIALVHIEDI---CDAHIFLMEQTK-AEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVR--  299 (353)
T ss_pred             cCCccccccccccccccCceeEEeHHHH---HHHHHHHHhCCC-cCccEEe-cCCCCCHHHHHHHHHHhCCCCCcccc--
Confidence            1221  111111111   1356666555   777777765433 3456865 56789999999999998863211100  


Q ss_pred             hhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHH
Q 016047          305 EEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFIT  384 (396)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~  384 (396)
                                                    +.  +....+   +          ....|.+|++++||+|+++++++|++
T Consensus       300 ------------------------------~~--~~~~~~---~----------~~~~~~~~~~~lGw~p~~~l~~~i~~  334 (353)
T PLN02896        300 ------------------------------LD--EEKRGS---I----------PSEISSKKLRDLGFEYKYGIEEIIDQ  334 (353)
T ss_pred             ------------------------------cc--ccccCc---c----------ccccCHHHHHHcCCCccCCHHHHHHH
Confidence                                          00  000000   0          12358999999999999999999999


Q ss_pred             HHHHHhhCCCCC
Q 016047          385 WIDKVKGFKIVP  396 (396)
Q Consensus       385 ~~~~~~~~~~~~  396 (396)
                      +++|+++.+.+|
T Consensus       335 ~~~~~~~~~~~~  346 (353)
T PLN02896        335 TIDCCVDHGFLP  346 (353)
T ss_pred             HHHHHHHCCCCC
Confidence            999999988764

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.98  E-value=2.2e-30  Score=243.02  Aligned_cols=296  Identities=20%  Similarity=0.210  Sum_probs=209.6

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC-CCeeEEEEecc
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL-TDVTHIFYVTW  105 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~-~~V~h~a~~~~  105 (396)
                      +|||||||||||++|+++|++     +||+|++++|..........++.++.+|+.+.+.+.+++..+ |.|+|+|+...
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~   76 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLA-----AGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSS   76 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHh-----CCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCCCEEEEccccCc
Confidence            499999999999999999999     899999999976543221246789999999998888888888 89999998765


Q ss_pred             CCCc---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC-CCCCCCCCcchhH
Q 016047          106 TNRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED-MPRLDAPNFYYTL  181 (396)
Q Consensus       106 ~~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~-~p~~~~~~~~y~~  181 (396)
                      ....   ++.+.+++|+.||.+++++|++.  .+++++++||..+|+..        ....+++|+ .|..|..  .|+.
T Consensus        77 ~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~--~~~~~v~~ss~~~~~~~--------~~~~~~~E~~~~~~p~~--~Yg~  144 (314)
T COG0451          77 VPDSNASDPAEFLDVNVDGTLNLLEAARAA--GVKRFVFASSVSVVYGD--------PPPLPIDEDLGPPRPLN--PYGV  144 (314)
T ss_pred             hhhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCCCceECCC--------CCCCCcccccCCCCCCC--HHHH
Confidence            4433   24568999999999999999984  48888886654444321        123467887 4555544  4664


Q ss_pred             -----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcch--hHHHHHHHHHHhhhcCCC-ceecCCccccceeeecccHH
Q 016047          182 -----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN--LVGALCVYAAVCKHEGIP-LRFPGTKAAWECYSIASDAD  253 (396)
Q Consensus       182 -----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~i~~~~~~~-~~~~g~~~~~~~~~~~~da~  253 (396)
                           |+++.++. +..+++++++||+.|||++......  +...+.  .  ....+.+ ..+.+++.+.+.++++.|+ 
T Consensus       145 sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~i~v~D~-  218 (314)
T COG0451         145 SKLAAEQLLRAYA-RLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFI--R--QLLKGEPIIVIGGDGSQTRDFVYVDDV-  218 (314)
T ss_pred             HHHHHHHHHHHHH-HHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHH--H--HHHhCCCcceEeCCCceeEeeEeHHHH-
Confidence                 66666655 4568999999999999944322111  111111  1  1122444 4566666666677776665 


Q ss_pred             HHHHHHHHHhcCCCCCCceeeecCCC-eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHH
Q 016047          254 LIAEHQIWAAVDPYAKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIV  332 (396)
Q Consensus       254 ~la~~~i~~~~~~~~~g~~~ni~~~~-~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (396)
                        +.+++.++.++...  +||++++. ..+++|+++.+.+.+|.....+..           ...               
T Consensus       219 --a~~~~~~~~~~~~~--~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-----------~~~---------------  268 (314)
T COG0451         219 --ADALLLALENPDGG--VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVY-----------IPL---------------  268 (314)
T ss_pred             --HHHHHHHHhCCCCc--EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceee-----------cCC---------------
Confidence              77777777654444  89999987 899999999999999987542100           000               


Q ss_pred             HHhCCCcccccccccceeehhhhcCcccccchhhHh-hcCCCccccCHHHHHHHHHHHhhCC
Q 016047          333 RENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDKVKGFK  393 (396)
Q Consensus       333 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~~~~~~~~~~~~~~~  393 (396)
                           ....             .......+|.+|++ ++||.|+.++++++.++++|+....
T Consensus       269 -----~~~~-------------~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         269 -----GRRG-------------DLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             -----CCCC-------------cccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence                 0000             00114457999998 5799999999999999999987654

>PLN00016 RNA-binding protein; Provisional

Probab=99.97  E-value=1.1e-30  Score=251.04  Aligned_cols=293  Identities=18%  Similarity=0.149  Sum_probs=197.1

Q ss_pred             cCCCCCCEEEEE----cCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--C----------CCCCeeEEEecCCC
Q 016047           20 PARSYQSVALIV----GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N----------ADHLVEYVQCDVSD   83 (396)
Q Consensus        20 ~~~~~~~~iLVt----GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~----------~~~~v~~~~~Dl~d   83 (396)
                      .+-.|+++||||    |||||||++|+++|++     .||+|++++|++....  .          ...+++++.+|+.|
T Consensus        47 ~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d  121 (378)
T PLN00016         47 AAAVEKKKVLIVNTNSGGHAFIGFYLAKELVK-----AGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD  121 (378)
T ss_pred             hcccccceEEEEeccCCCceeEhHHHHHHHHH-----CCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH
Confidence            344566899999    9999999999999999     8999999999864310  0          12358899999877


Q ss_pred             hHHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047           84 PEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        84 ~~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                      .+.+. ...++|.|+|+++.              ++.++++++++|++.+  +++|+++||..+|       |..  ...
T Consensus       122 ~~~~~-~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~g--vkr~V~~SS~~vy-------g~~--~~~  175 (378)
T PLN00016        122 VKSKV-AGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPG--LKQFLFCSSAGVY-------KKS--DEP  175 (378)
T ss_pred             HHhhh-ccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcC--CCEEEEEccHhhc-------CCC--CCC
Confidence            33222 22467888887431              2457889999999765  7899988866555       421  134


Q ss_pred             CccCCCCCCCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcccc
Q 016047          164 PFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAW  243 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~  243 (396)
                      |..|+++..|.. .....|+++     ++.+++++++||+++||+  +........+.  ..+.  .+.++.++|++.+.
T Consensus       176 p~~E~~~~~p~~-sK~~~E~~l-----~~~~l~~~ilRp~~vyG~--~~~~~~~~~~~--~~~~--~~~~i~~~g~g~~~  243 (378)
T PLN00016        176 PHVEGDAVKPKA-GHLEVEAYL-----QKLGVNWTSFRPQYIYGP--GNNKDCEEWFF--DRLV--RGRPVPIPGSGIQL  243 (378)
T ss_pred             CCCCCCcCCCcc-hHHHHHHHH-----HHcCCCeEEEeceeEECC--CCCCchHHHHH--HHHH--cCCceeecCCCCee
Confidence            566776655432 223344443     345899999999999994  33222222221  1111  25566777877776


Q ss_pred             ceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhcc
Q 016047          244 ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKG  323 (396)
Q Consensus       244 ~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (396)
                      +.++|+.|+   |++++.++.++...+++||+++++.+|+.|+++.+++.+|.+....            ..+...+  .
T Consensus       244 ~~~i~v~Dv---a~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~------------~~~~~~~--~  306 (378)
T PLN00016        244 TQLGHVKDL---ASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIV------------HYDPKAV--G  306 (378)
T ss_pred             eceecHHHH---HHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCcee------------ecCcccc--C
Confidence            677766665   7777777766556679999999999999999999999999764221            1111000  0


Q ss_pred             chHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCCC
Q 016047          324 KEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       324 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~  395 (396)
                                 .+... .      +++     ....+.+|++|+++ +||+|+++++|+|+++++||++.|.+
T Consensus       307 -----------~~~~~-~------~p~-----~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~  356 (378)
T PLN00016        307 -----------FGAKK-A------FPF-----RDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD  356 (378)
T ss_pred             -----------ccccc-c------ccc-----cccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence                       00000 0      000     00134579999987 69999999999999999999988764

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.97  E-value=2.3e-30  Score=243.06  Aligned_cols=292  Identities=11%  Similarity=0.102  Sum_probs=190.6

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh----cCCCeeEEEE
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTDVTHIFY  102 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~~~V~h~a~  102 (396)
                      |||||||||||++|+++|++     .|+ +|++++|..............+.+|+.+.+.++.+..    ++|.|+|+|+
T Consensus         1 ilItGatG~iG~~l~~~L~~-----~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~   75 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNE-----RGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA   75 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHH-----cCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence            69999999999999999998     787 7888887543221110112356788888877766553    7899999998


Q ss_pred             eccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC-CCCCcchhH
Q 016047          103 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL-DAPNFYYTL  181 (396)
Q Consensus       103 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~-~~~~~~y~~  181 (396)
                      .......++...+++|+.++.+++++|++.+  + +++++||..+       ||..   ..+++|+++.. |..  .|+.
T Consensus        76 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~-~~v~~SS~~v-------y~~~---~~~~~e~~~~~~p~~--~Y~~  140 (314)
T TIGR02197        76 CSDTTETDGEYMMENNYQYSKRLLDWCAEKG--I-PFIYASSAAT-------YGDG---EAGFREGRELERPLN--VYGY  140 (314)
T ss_pred             ccCccccchHHHHHHHHHHHHHHHHHHHHhC--C-cEEEEccHHh-------cCCC---CCCcccccCcCCCCC--HHHH
Confidence            6443334667788999999999999999864  3 5777775544       4432   33456665432 333  3664


Q ss_pred             -----HHHHHHHhhc-CCCeeEEEEcCCceeecCCCCcc---hhHHHHHHHHHHhhhcCCCceec------CCcccccee
Q 016047          182 -----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIPLRFP------GTKAAWECY  246 (396)
Q Consensus       182 -----e~~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~------g~~~~~~~~  246 (396)
                           |+++.++..+ ..+++++++||+.|||+......   ++...+.  ..+.  .+.++...      +++.+.+++
T Consensus       141 sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~g~~~~~~  216 (314)
T TIGR02197       141 SKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLF--NQIK--AGGNVKLFKSSEGFKDGEQLRDF  216 (314)
T ss_pred             HHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHH--HHHh--cCCCeEEecCccccCCCCceeee
Confidence                 4555443212 34579999999999995422111   1111111  1111  23333322      455666777


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchH
Q 016047          247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  326 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (396)
                      +|+.|+   +++++.++..  ..+++||++++.++|++|+++.+.+.+|.+... .           ..+.+.       
T Consensus       217 i~v~D~---a~~i~~~~~~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~-~-----------~~~~~~-------  272 (314)
T TIGR02197       217 VYVKDV---VDVNLWLLEN--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKI-E-----------YIPMPE-------  272 (314)
T ss_pred             EEHHHH---HHHHHHHHhc--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcc-e-----------eccCcc-------
Confidence            777776   7776666654  456799999999999999999999999965321 0           000000       


Q ss_pred             HHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhc-CCCccccCHHHHHHHHHHHhh
Q 016047          327 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEH-GFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       327 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~l-G~~p~~~~~~~~~~~~~~~~~  391 (396)
                                   .....   +        ......|++|++++ ||+|+++++|+|+++++|+++
T Consensus       273 -------------~~~~~---~--------~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~~  314 (314)
T TIGR02197       273 -------------ALRGK---Y--------QYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLLA  314 (314)
T ss_pred             -------------ccccc---c--------ccccccchHHHHHhcCCCCcccHHHHHHHHHHHHhC
Confidence                         00000   0        00234699999975 999999999999999999863

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.97  E-value=6.1e-30  Score=237.13  Aligned_cols=280  Identities=16%  Similarity=0.159  Sum_probs=191.1

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC--CCeeEEEEec
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYVT  104 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--~~V~h~a~~~  104 (396)
                      +|||||||||||++++++|++     +||+|++++|.              .+|+.+++++.++++++  |.|+|+++..
T Consensus         1 kilv~G~tG~iG~~l~~~l~~-----~g~~v~~~~r~--------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~   61 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSP-----EGRVVVALTSS--------------QLDLTDPEALERLLRAIRPDAVVNTAAYT   61 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHh-----cCCEEEEeCCc--------------ccCCCCHHHHHHHHHhCCCCEEEECCccc
Confidence            589999999999999999999     89999999885              57999999999999886  8899998754


Q ss_pred             cCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHH
Q 016047          105 WTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE  182 (396)
Q Consensus       105 ~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e  182 (396)
                      ....  ..+...+++|+.++.+++++|++.+  . +++++||..+|+..         ...|++|+++..|..  .|+..
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~v~~Ss~~vy~~~---------~~~~~~E~~~~~~~~--~Y~~~  127 (287)
T TIGR01214        62 DVDGAESDPEKAFAVNALAPQNLARAAARHG--A-RLVHISTDYVFDGE---------GKRPYREDDATNPLN--VYGQS  127 (287)
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEeeeeeecCC---------CCCCCCCCCCCCCcc--hhhHH
Confidence            3321  2456778999999999999998764  2 67777765555321         245788888765543  47776


Q ss_pred             HHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 016047          183 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA  262 (396)
Q Consensus       183 ~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~  262 (396)
                      |...+......+++++++||+.|||+.  ...++...+...  +.  .+.++...++  ++..++++.|   +|.+++.+
T Consensus       128 K~~~E~~~~~~~~~~~ilR~~~v~G~~--~~~~~~~~~~~~--~~--~~~~~~~~~~--~~~~~v~v~D---va~a~~~~  196 (287)
T TIGR01214       128 KLAGEQAIRAAGPNALIVRTSWLYGGG--GGRNFVRTMLRL--AG--RGEELRVVDD--QIGSPTYAKD---LARVIAAL  196 (287)
T ss_pred             HHHHHHHHHHhCCCeEEEEeeecccCC--CCCCHHHHHHHH--hh--cCCCceEecC--CCcCCcCHHH---HHHHHHHH
Confidence            666554434557899999999999954  323332222111  11  1334444443  3344555444   47777777


Q ss_pred             hcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccc
Q 016047          263 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL  342 (396)
Q Consensus       263 ~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  342 (396)
                      +..+...+++||+++++.+|+.|+++.+++.+|.+....+.            +.   +....      ...+.  . +.
T Consensus       197 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~------------~~---~~~~~------~~~~~--~-~~  252 (287)
T TIGR01214       197 LQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHP------------QE---VKPIS------SKEYP--R-PA  252 (287)
T ss_pred             HhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccC------------ce---eEeec------HHHcC--C-CC
Confidence            76544568899999999999999999999999976532110            00   00000      00000  0 00


Q ss_pred             cccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHH
Q 016047          343 DEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWID  387 (396)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~  387 (396)
                      ..            .....+|++|+|+ +|| +.++++++|+++++
T Consensus       253 ~~------------~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~  285 (287)
T TIGR01214       253 RR------------PAYSVLDNTKLVKTLGT-PLPHWREALRAYLQ  285 (287)
T ss_pred             CC------------CCccccchHHHHHHcCC-CCccHHHHHHHHHh
Confidence            00            0134589999998 599 57899999998875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=8.3e-30  Score=226.33  Aligned_cols=300  Identities=17%  Similarity=0.141  Sum_probs=213.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      +.++||||||+||||+|.+-+|++     +||.|++++.-....          .....++.++++|+.|.+.+++.++.
T Consensus         1 ~~~~VLVtGgaGyiGsht~l~L~~-----~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~   75 (343)
T KOG1371|consen    1 GGKHVLVTGGAGYIGSHTVLALLK-----RGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE   75 (343)
T ss_pred             CCcEEEEecCCcceehHHHHHHHh-----CCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh
Confidence            457999999999999999999999     899999999743211          11236899999999999999999876


Q ss_pred             --CCCeeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           94 --LTDVTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        94 --~~~V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                        .|.|+|+|+......+  ++......|+.||.+||++|++++  +++++++||..       +||.  +...|++|+.
T Consensus        76 ~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~--~~~~V~sssat-------vYG~--p~~ip~te~~  144 (343)
T KOG1371|consen   76 VKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN--VKALVFSSSAT-------VYGL--PTKVPITEED  144 (343)
T ss_pred             cCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC--CceEEEeccee-------eecC--cceeeccCcC
Confidence              4569999988776544  678888999999999999999986  88888887655       5554  3468999999


Q ss_pred             CCC-CCCCc---chhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCC---------cchhHHHHHHHHHHhhh-----cC
Q 016047          170 PRL-DAPNF---YYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKH-----EG  231 (396)
Q Consensus       170 p~~-~~~~~---~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~-----~~  231 (396)
                      |.. |.+++   .|..|+++..+. ...++.++.||..+++|..|..         ..+... .....++-+.     .+
T Consensus       145 ~t~~p~~pyg~tK~~iE~i~~d~~-~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g  222 (343)
T KOG1371|consen  145 PTDQPTNPYGKTKKAIEEIIHDYN-KAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVG  222 (343)
T ss_pred             CCCCCCCcchhhhHHHHHHHHhhh-ccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeec
Confidence            887 55552   233477777665 5566999999999999954321         112211 1111111111     12


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCC
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGG  309 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~  309 (396)
                      .+.... ++...+..+++.|.   |+.++.++....  ..-++||++++...++.+|...+.+.+|.+.+...       
T Consensus       223 ~d~~t~-dgt~vrdyi~v~Dl---a~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~-------  291 (343)
T KOG1371|consen  223 RDYTTI-DGTIVRDYIHVLDL---ADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKV-------  291 (343)
T ss_pred             Cccccc-CCCeeecceeeEeh---HHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccc-------
Confidence            332222 22444556666665   777777665433  23459999999999999999999999998865410       


Q ss_pred             CCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHh-hcCCCccccCHHHHHHHHHH
Q 016047          310 GGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSK-EHGFSGFRNSKNSFITWIDK  388 (396)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~~~~~~~~~~  388 (396)
                           +                    +.++.+.               ..++.+.++++ ||||+|.+++++++++..+|
T Consensus       292 -----v--------------------~~R~gdv---------------~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W  331 (343)
T KOG1371|consen  292 -----V--------------------PRRNGDV---------------AFVYANPSKAQRELGWKAKYGLQEMLKDLWRW  331 (343)
T ss_pred             -----c--------------------CCCCCCc---------------eeeeeChHHHHHHhCCccccCHHHHHHHHHHH
Confidence                 0                    0011111               14567888886 68999999999999999999


Q ss_pred             HhhC
Q 016047          389 VKGF  392 (396)
Q Consensus       389 ~~~~  392 (396)
                      +...
T Consensus       332 ~~~n  335 (343)
T KOG1371|consen  332 QKQN  335 (343)
T ss_pred             HhcC
Confidence            9765

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=3.9e-29  Score=230.61  Aligned_cols=328  Identities=16%  Similarity=0.136  Sum_probs=211.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC-CCC------CCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-NWN------ADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-~~~------~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      +.++|||||+||+|.||+.+|+++.   ...+|++++..+.. .+.      ....++++++|+.|...+..+++++ .|
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~---~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V   79 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENE---LKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VV   79 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcc---cccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence            3689999999999999999999842   13789999987652 221      1467889999999999999999999 89


Q ss_pred             eEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCC
Q 016047           98 THIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  175 (396)
Q Consensus        98 ~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~  175 (396)
                      +|||+.......  +++..+++||.||+|++++|.+.+  +++++++||..+.....       + ....+|+.|.....
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~--v~~lIYtSs~~Vvf~g~-------~-~~n~~E~~p~p~~~  149 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG--VKRLIYTSSAYVVFGGE-------P-IINGDESLPYPLKH  149 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhC--CCEEEEecCceEEeCCe-------e-cccCCCCCCCcccc
Confidence            999875443322  478889999999999999999986  89999988766553221       1 12234444432211


Q ss_pred             CcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce---ee
Q 016047          176 NFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC---YS  247 (396)
Q Consensus       176 ~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~---~~  247 (396)
                      ...|+.     |+++.++. ...++..+++||..|||++..........+      .+ .+..+-..|....+..   ..
T Consensus       150 ~d~Y~~sKa~aE~~Vl~an-~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~------~~-~g~~~f~~g~~~~~~~~~~~~  221 (361)
T KOG1430|consen  150 IDPYGESKALAEKLVLEAN-GSDDLYTCALRPPGIYGPGDKRLLPKIVEA------LK-NGGFLFKIGDGENLNDFTYGE  221 (361)
T ss_pred             ccccchHHHHHHHHHHHhc-CCCCeeEEEEccccccCCCCccccHHHHHH------HH-ccCceEEeeccccccceEEec
Confidence            123664     56666543 345599999999999994332222211111      11 2322222343333333   33


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHH
Q 016047          248 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  327 (396)
Q Consensus       248 ~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (396)
                      .++.+..+|...+.. ..+...|+.|+|.++.++...+++..+.+.+|...+....         .|..+..+++-..+.
T Consensus       222 Nva~ahilA~~aL~~-~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~---------~p~~l~~~~~~l~e~  291 (361)
T KOG1430|consen  222 NVAWAHILAARALLD-KSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIK---------LPLFLSYFLAYLLEI  291 (361)
T ss_pred             hhHHHHHHHHHHHHh-cCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceee---------cchHHHHHHHHHHHH
Confidence            344444444332221 4566789999999999988888888999999987662111         455555555543322


Q ss_pred             HHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCC
Q 016047          328 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK  393 (396)
Q Consensus       328 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~  393 (396)
                      -..+...  . ...+..     + ...+......+|++||++ |||.|..++++++++++.|+..+.
T Consensus       292 ~~~~l~p--~-~p~lt~-----~-~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~  349 (361)
T KOG1430|consen  292 VYFLLRP--Y-QPILTR-----F-RVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASES  349 (361)
T ss_pred             HHHhccC--C-CCCcCh-----h-heeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhh
Confidence            2222211  1 111111     0 001111255689999985 699999999999999999886543

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.97  E-value=2.7e-28  Score=230.16  Aligned_cols=296  Identities=18%  Similarity=0.143  Sum_probs=197.3

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCC---CCCeeEEEecCCChHHHHHHHh--cCCCee
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNA---DHLVEYVQCDVSDPEETQAKLS--QLTDVT   98 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~---~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~   98 (396)
                      +|||||||||||++|+++|++     .|++|++++|.....   ...   ..+++.+.+|+.+++++.+++.  .+|.|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~-----~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLE-----SGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHh-----CCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            589999999999999999998     799999887643221   110   0156788999999999998886  578899


Q ss_pred             EEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCC
Q 016047           99 HIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  176 (396)
Q Consensus        99 h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~  176 (396)
                      |+|+......  .++.+.++.|+.++.+++++|.+.+  +++++++||..+|       |..  ...+++|+++..+...
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~ss~~~~-------g~~--~~~~~~e~~~~~~~~~  144 (328)
T TIGR01179        76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG--VKKFIFSSSAAVY-------GEP--SSIPISEDSPLGPINP  144 (328)
T ss_pred             ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC--CCEEEEecchhhc-------CCC--CCCCccccCCCCCCCc
Confidence            9987543221  2456678999999999999998764  5688887765544       321  1346788877665444


Q ss_pred             cchh-----HHHHHHHHhhcC-CCeeEEEEcCCceeecCCCCcc----hhHHHHHHHH-HHhhhcCCCceecC------C
Q 016047          177 FYYT-----LEDILFEEVEKK-EELSWSVHRPDTIFGFSPYSLM----NLVGALCVYA-AVCKHEGIPLRFPG------T  239 (396)
Q Consensus       177 ~~y~-----~e~~l~~~~~~~-~~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~-~i~~~~~~~~~~~g------~  239 (396)
                        |+     .|.++..+. +. .+++++++||+.+||+.+....    .....+..++ ....+...++...|      +
T Consensus       145 --y~~sK~~~e~~~~~~~-~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (328)
T TIGR01179       145 --YGRSKLMSERILRDLS-KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPD  221 (328)
T ss_pred             --hHHHHHHHHHHHHHHH-HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCC
Confidence              54     366666654 44 7899999999999996543210    0011111111 11111222322222      3


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCH
Q 016047          240 KAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL  317 (396)
Q Consensus       240 ~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  317 (396)
                      +.+.+.++++.|+   +++++.++..  ....+++||++++..+|++||++.+++.+|.+.....            .. 
T Consensus       222 g~~~~~~v~~~D~---a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~------------~~-  285 (328)
T TIGR01179       222 GTCVRDYIHVMDL---ADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVEL------------AP-  285 (328)
T ss_pred             CceEEeeeeHHHH---HHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEe------------CC-
Confidence            3444566666666   5665555432  2245789999999999999999999999987643200            00 


Q ss_pred             HHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCcccc-CHHHHHHHHHHHhh
Q 016047          318 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRN-SKNSFITWIDKVKG  391 (396)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~-~~~~~~~~~~~~~~  391 (396)
                                         ......               ....+|++|+++ +||+|.++ ++++++++++|+++
T Consensus       286 -------------------~~~~~~---------------~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~  327 (328)
T TIGR01179       286 -------------------RRPGDP---------------ASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESR  327 (328)
T ss_pred             -------------------CCCccc---------------cchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhc
Confidence                               000000               023469999986 69999998 99999999999875

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.96  E-value=3.4e-28  Score=232.45  Aligned_cols=254  Identities=14%  Similarity=0.135  Sum_probs=167.6

Q ss_pred             cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-------CCCCeeEEEecCCChHHH
Q 016047           20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-------ADHLVEYVQCDVSDPEET   87 (396)
Q Consensus        20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-------~~~~v~~~~~Dl~d~~~~   87 (396)
                      ....++|+||||||+||||++|+++|++     +||+|++++|+....     ..       ...+++++.+|++|++++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~-----~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l  122 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLR-----HGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESL  122 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHH
Confidence            3456678999999999999999999999     899999988864221     00       012578899999999999


Q ss_pred             HHHHhcCCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC--C
Q 016047           88 QAKLSQLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD--P  163 (396)
Q Consensus        88 ~~~~~~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~--~  163 (396)
                      .++++++|.|+|+++......  .......++|+.++.+++++|++.. ++++++++||...     .+||...+..  .
T Consensus       123 ~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~-----~vyg~~~~~~~~~  196 (367)
T PLN02686        123 HEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLA-----CVWRQNYPHDLPP  196 (367)
T ss_pred             HHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHH-----hcccccCCCCCCc
Confidence            999999999999988643322  1224556889999999999998752 3788888886420     1333211111  2


Q ss_pred             CccCCCCCC----CCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047          164 PFTEDMPRL----DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  234 (396)
Q Consensus       164 p~~E~~p~~----~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  234 (396)
                      +++|+.+..    +.+...|+.     |+++..+. +..+++++++||++|||++......  ..+.   ....  +. +
T Consensus       197 ~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~-~~~gl~~v~lRp~~vyGp~~~~~~~--~~~~---~~~~--g~-~  267 (367)
T PLN02686        197 VIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAA-RGKGLKLATICPALVTGPGFFRRNS--TATI---AYLK--GA-Q  267 (367)
T ss_pred             ccCCCCCCChhhcccccchHHHHHHHHHHHHHHHH-HhcCceEEEEcCCceECCCCCCCCC--hhHH---HHhc--CC-C
Confidence            345543221    112223664     66665554 5679999999999999953221111  1111   1111  22 2


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCC
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  299 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~  299 (396)
                      .+.|++.  ..++|+.|   +|.+++.++..  +...+++| ++++..+|++|+++.+.+.+|.+..
T Consensus       268 ~~~g~g~--~~~v~V~D---va~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~  328 (367)
T PLN02686        268 EMLADGL--LATADVER---LAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPIN  328 (367)
T ss_pred             ccCCCCC--cCeEEHHH---HHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCC
Confidence            3344443  23555555   47777777653  23456778 7788999999999999999987643

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.96  E-value=2.5e-28  Score=226.73  Aligned_cols=236  Identities=16%  Similarity=0.137  Sum_probs=154.6

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEeccCC
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTN  107 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~~~  107 (396)
                      |||||||||||++|+++|++     +|++|++++|++...... ....  ..|+.. ..+..++.++|.|+|+|+.....
T Consensus         1 vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~-~~~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~   71 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTK-----DGHEVTILTRSPPAGANT-KWEG--YKPWAP-LAESEALEGADAVINLAGEPIAD   71 (292)
T ss_pred             CEEEcccchhhHHHHHHHHH-----cCCEEEEEeCCCCCCCcc-ccee--eecccc-cchhhhcCCCCEEEECCCCCccc
Confidence            69999999999999999999     799999999986542110 0111  122222 44556778899999998754321


Q ss_pred             --Cc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh---
Q 016047          108 --RS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT---  180 (396)
Q Consensus       108 --~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~---  180 (396)
                        ..  .+...+++|+.++++++++|++.+.+..+++++|++..|       |..  ...+++|+.+..+.+  ++.   
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~y-------g~~--~~~~~~E~~~~~~~~--~~~~~~  140 (292)
T TIGR01777        72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYY-------GTS--EDRVFTEEDSPAGDD--FLAELC  140 (292)
T ss_pred             ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEe-------CCC--CCCCcCcccCCCCCC--hHHHHH
Confidence              11  346678999999999999999875433456655554444       321  145677877543322  232   


Q ss_pred             --HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 016047          181 --LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  258 (396)
Q Consensus       181 --~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  258 (396)
                        .|+.+.. . ++.+++++++||+.|||+..+    ....+...  .....+.+   .|++.+.++++++.|+   |++
T Consensus       141 ~~~e~~~~~-~-~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~--~~~~~~~~---~g~~~~~~~~i~v~Dv---a~~  206 (292)
T TIGR01777       141 RDWEEAAQA-A-EDLGTRVVLLRTGIVLGPKGG----ALAKMLPP--FRLGLGGP---LGSGRQWFSWIHIEDL---VQL  206 (292)
T ss_pred             HHHHHHhhh-c-hhcCCceEEEeeeeEECCCcc----hhHHHHHH--HhcCcccc---cCCCCcccccEeHHHH---HHH
Confidence              2333332 2 456899999999999995322    11111110  11111211   4566666677766665   777


Q ss_pred             HHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047          259 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED  298 (396)
Q Consensus       259 ~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~  298 (396)
                      +..++..+. .+++||+++++.+|++||++.+++.+|.+.
T Consensus       207 i~~~l~~~~-~~g~~~~~~~~~~s~~di~~~i~~~~g~~~  245 (292)
T TIGR01777       207 ILFALENAS-ISGPVNATAPEPVRNKEFAKALARALHRPA  245 (292)
T ss_pred             HHHHhcCcc-cCCceEecCCCccCHHHHHHHHHHHhCCCC
Confidence            777776543 356899999999999999999999999754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.96  E-value=2.1e-28  Score=229.85  Aligned_cols=295  Identities=13%  Similarity=0.121  Sum_probs=187.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |+|||||||||||++|+++|++     +||+|++++|++... .....+++++.+|+.|++++.++++++|.|+|+++. 
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~-----~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~-   74 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALD-----EGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTS-   74 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC-
Confidence            4899999999999999999999     899999999986432 112247899999999999999999999999998642 


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  184 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~  184 (396)
                        ...++....++|+.++.|++++|++++  +++++++|+...+     .|+              ..+     |...|.
T Consensus        75 --~~~~~~~~~~~~~~~~~~l~~aa~~~g--vkr~I~~Ss~~~~-----~~~--------------~~~-----~~~~K~  126 (317)
T CHL00194         75 --RPSDLYNAKQIDWDGKLALIEAAKAAK--IKRFIFFSILNAE-----QYP--------------YIP-----LMKLKS  126 (317)
T ss_pred             --CCCCccchhhhhHHHHHHHHHHHHHcC--CCEEEEecccccc-----ccC--------------CCh-----HHHHHH
Confidence              223345567899999999999999875  7889887642110     111              011     232222


Q ss_pred             HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 016047          185 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV  264 (396)
Q Consensus       185 l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~  264 (396)
                      ..+.+.++.+++++++||+.+|+.-       ...+.  ..+.  .+.++...+ +.+.+.++++.|   +|++++.++.
T Consensus       127 ~~e~~l~~~~l~~tilRp~~~~~~~-------~~~~~--~~~~--~~~~~~~~~-~~~~~~~i~v~D---va~~~~~~l~  191 (317)
T CHL00194        127 DIEQKLKKSGIPYTIFRLAGFFQGL-------ISQYA--IPIL--EKQPIWITN-ESTPISYIDTQD---AAKFCLKSLS  191 (317)
T ss_pred             HHHHHHHHcCCCeEEEeecHHhhhh-------hhhhh--hhhc--cCCceEecC-CCCccCccCHHH---HHHHHHHHhc
Confidence            2222225578999999999887621       11110  0011  123433333 333445555555   4777777776


Q ss_pred             CCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccc
Q 016047          265 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDE  344 (396)
Q Consensus       265 ~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  344 (396)
                      .+...+++||+++++.+|++|+++.+.+.+|.+.....          .|..+..+..    .|..   .++..+ ....
T Consensus       192 ~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~----------vp~~~~~~~~----~~~~---~~~~~~-~~~~  253 (317)
T CHL00194        192 LPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISR----------VPLFLLKLLR----QITG---FFEWTW-NISD  253 (317)
T ss_pred             CccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEe----------CCHHHHHHHH----HHHh---hcccch-hhHH
Confidence            66667899999999999999999999999998643311          2222222221    1211   111100 0000


Q ss_pred             cccceeehhhhcCcccccchhhHhh-cCCCcc--ccCHHHHHHHHHHH
Q 016047          345 VGAWWFVDLVLTGEAKLASMNKSKE-HGFSGF--RNSKNSFITWIDKV  389 (396)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~--~~~~~~~~~~~~~~  389 (396)
                        ...+....-...+..++.+++++ +|+.|.  .++++.++++++..
T Consensus       254 --~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  299 (317)
T CHL00194        254 --RLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERI  299 (317)
T ss_pred             --HHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHH
Confidence              00000111111244567888887 599984  78999999887653

>PRK05865 hypothetical protein; Provisional

Probab=99.96  E-value=1.8e-27  Score=243.24  Aligned_cols=258  Identities=19%  Similarity=0.263  Sum_probs=179.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  105 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~  105 (396)
                      |+|||||||||||++++++|++     +|++|++++|+.....  ..+++++.+|+.|.+++.++++++|.|+|+|+...
T Consensus         1 MkILVTGATGfIGs~La~~Ll~-----~G~~Vv~l~R~~~~~~--~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~   73 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLS-----QGHEVVGIARHRPDSW--PSSADFIAADIRDATAVESAMTGADVVAHCAWVRG   73 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCchhhc--ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCccc
Confidence            4799999999999999999999     8999999999754322  13688999999999999999999999999975321


Q ss_pred             CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHH
Q 016047          106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL  185 (396)
Q Consensus       106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l  185 (396)
                             ..+++|+.++.+++++|++.+  +++++++||.                .               ....|+++
T Consensus        74 -------~~~~vNv~GT~nLLeAa~~~g--vkr~V~iSS~----------------~---------------K~aaE~ll  113 (854)
T PRK05865         74 -------RNDHINIDGTANVLKAMAETG--TGRIVFTSSG----------------H---------------QPRVEQML  113 (854)
T ss_pred             -------chHHHHHHHHHHHHHHHHHcC--CCeEEEECCc----------------H---------------HHHHHHHH
Confidence                   146899999999999999864  6788876521                0               13345544


Q ss_pred             HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 016047          186 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD  265 (396)
Q Consensus       186 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~  265 (396)
                           .+++++++++||++|||  |+. .++..         .....++...|+..+.+.++|+.|+   |.+++.++..
T Consensus       114 -----~~~gl~~vILRp~~VYG--P~~-~~~i~---------~ll~~~v~~~G~~~~~~dfIhVdDV---A~Ai~~aL~~  173 (854)
T PRK05865        114 -----ADCGLEWVAVRCALIFG--RNV-DNWVQ---------RLFALPVLPAGYADRVVQVVHSDDA---QRLLVRALLD  173 (854)
T ss_pred             -----HHcCCCEEEEEeceEeC--CCh-HHHHH---------HHhcCceeccCCCCceEeeeeHHHH---HHHHHHHHhC
Confidence                 24589999999999999  431 11111         1112232223444444567776665   7777666654


Q ss_pred             CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCccccccc
Q 016047          266 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEV  345 (396)
Q Consensus       266 ~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  345 (396)
                      +...+++|||++++.+|++|+++.+.+...    ...            .........               ...+.  
T Consensus       174 ~~~~ggvyNIgsg~~~Si~EIae~l~~~~~----~v~------------~~~~~~~~~---------------~~~~~--  220 (854)
T PRK05865        174 TVIDSGPVNLAAPGELTFRRIAAALGRPMV----PIG------------SPVLRRVTS---------------FAELE--  220 (854)
T ss_pred             CCcCCCeEEEECCCcccHHHHHHHHhhhhc----cCC------------chhhhhccc---------------hhhhh--
Confidence            444578999999999999999998876431    100            000000000               00000  


Q ss_pred             ccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          346 GAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       346 ~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                               .......+|++|+++ +||+|+++++++|+++++|++.+
T Consensus       221 ---------~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r  259 (854)
T PRK05865        221 ---------LLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR  259 (854)
T ss_pred             ---------cccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence                     000133579999986 69999999999999999999864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=4.6e-27  Score=204.05  Aligned_cols=317  Identities=15%  Similarity=0.123  Sum_probs=213.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      |.|+.||||-||+-|++|++.|++     +||+|+++.|+....           ...+++++++.||++|...+..+++
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLe-----kGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~   75 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLE-----KGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE   75 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHh-----cCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence            568999999999999999999999     899999999984321           1133468899999999999999999


Q ss_pred             cCCC--eeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           93 QLTD--VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        93 ~~~~--V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      .+.+  |+|+|+.+++..+  +|....+++..||.+||+|++..+++-.+|..       .||++.||..  .+.|.+|+
T Consensus        76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQ-------AStSE~fG~v--~~~pq~E~  146 (345)
T COG1089          76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQ-------ASTSELYGLV--QEIPQKET  146 (345)
T ss_pred             hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEe-------cccHHhhcCc--ccCccccC
Confidence            8776  9999999887655  67788899999999999999987642233332       4677788875  37899999


Q ss_pred             CCCCCCCCcchhHHHHHHHHh----hcCCCeeEEEEcCCceeecCCCCcchh-HHHHHHHHH-HhhhcCCCceecCCccc
Q 016047          169 MPRLDAPNFYYTLEDILFEEV----EKKEELSWSVHRPDTIFGFSPYSLMNL-VGALCVYAA-VCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       169 ~p~~~~~~~~y~~e~~l~~~~----~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~-i~~~~~~~~~~~g~~~~  242 (396)
                      +|+.|.++  |+..|+..-..    .+.+|+-.+.=...+-=+  |...-.| ...+...++ |..++... .+.|+.+.
T Consensus       147 TPFyPrSP--YAvAKlYa~W~tvNYResYgl~AcnGILFNHES--P~Rge~FVTRKIt~ava~Ik~G~q~~-l~lGNldA  221 (345)
T COG1089         147 TPFYPRSP--YAVAKLYAYWITVNYRESYGLFACNGILFNHES--PLRGETFVTRKITRAVARIKLGLQDK-LYLGNLDA  221 (345)
T ss_pred             CCCCCCCH--HHHHHHHHHheeeehHhhcCceeecceeecCCC--CCCccceehHHHHHHHHHHHccccce-EEeccccc
Confidence            99999777  88776665432    245565544433333323  4444344 234443333 44444433 67899888


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhc
Q 016047          243 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  322 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (396)
                      .++|.+..|.   +++ +|++.+... ++.|.|+.+...|++|++++..+..|....-.-. + ..|   .-.+      
T Consensus       222 kRDWG~A~DY---Ve~-mwlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~-g-~~e---~g~d------  285 (345)
T COG1089         222 KRDWGHAKDY---VEA-MWLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGT-G-VDE---KGVD------  285 (345)
T ss_pred             cccccchHHH---HHH-HHHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeec-c-ccc---cccc------
Confidence            8877777665   555 444444333 6779999999999999999999999965321000 0 000   0000      


Q ss_pred             cchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHh
Q 016047          323 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  390 (396)
Q Consensus       323 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~  390 (396)
                                ...|-..-.++. .-+--.+    .+-.+.|.+||++ |||+|+++++|.++++++...
T Consensus       286 ----------a~~G~~~V~idp-~~fRPaE----V~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl  339 (345)
T COG1089         286 ----------AKTGKIIVEIDP-RYFRPAE----VDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADL  339 (345)
T ss_pred             ----------cccCceeEEECc-cccCchh----hhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHH
Confidence                      000100000000 0000000    0134579999995 799999999999999998754

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8e-26  Score=233.09  Aligned_cols=253  Identities=16%  Similarity=0.094  Sum_probs=165.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------CCCCCeeEEEecCCCh------HHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDP------EETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~------~~~~~~~~   92 (396)
                      |+|||||||||||++|+++|+++.   .|++|++++|++....       ....+++++.+|+.|+      +.+.++ .
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~---~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRR---REATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcC---CCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence            489999999999999999999411   6899999999653210       0124789999999984      345554 8


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL  172 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~  172 (396)
                      ++|.|+|||+..... .++....++|+.|+.+++++|++.+  +++++++||..+|+..          ..+.+|+....
T Consensus        77 ~~D~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~--~~~~v~~SS~~v~g~~----------~~~~~e~~~~~  143 (657)
T PRK07201         77 DIDHVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERLQ--AATFHHVSSIAVAGDY----------EGVFREDDFDE  143 (657)
T ss_pred             CCCEEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhcC--CCeEEEEeccccccCc----------cCccccccchh
Confidence            899999999854332 3456678999999999999999864  5778877766555321          22334443211


Q ss_pred             C-CCCcchhHHHHHHHHhhc-CCCeeEEEEcCCceeecCCCCcc-hh--HHHHHHHHHHhhhcCCCceecCCccccceee
Q 016047          173 D-APNFYYTLEDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLM-NL--VGALCVYAAVCKHEGIPLRFPGTKAAWECYS  247 (396)
Q Consensus       173 ~-~~~~~y~~e~~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~-~~--~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~  247 (396)
                      + .....|+..|...+.... ..+++++++||+.|||+...... +.  ...+...+.........++..+.+.....++
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  223 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIV  223 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeee
Confidence            1 112337765555443322 46899999999999996432211 11  0011111110011111122333333334455


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047          248 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED  298 (396)
Q Consensus       248 ~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~  298 (396)
                      ++   ++++.+++.++..+...+++||+++++.+|++|+++.+++.+|.+.
T Consensus       224 ~v---ddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        224 PV---DYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             eH---HHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            44   4457787777766566789999999999999999999999999875

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=1.1e-25  Score=209.35  Aligned_cols=241  Identities=12%  Similarity=0.067  Sum_probs=161.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +++|||||||||||++++++|++     +||+|++++|++...        .. ...+++++.+|++|.+++.+++.+++
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~-----~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d   80 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLS-----RGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCS   80 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCC
Confidence            46899999999999999999999     899999999863211        10 12368899999999999999999999


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccc-cCCCCCCCccCCCCCCCC
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG-KIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g-~~~~~~~p~~E~~p~~~~  174 (396)
                      .|+|+++..........+.+++|+.|+.+++++|.+.. .+++++++||...+.     ++ .......+++|+.+..+.
T Consensus        81 ~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~-----~~~~~~~~~~~~~E~~~~~~~  154 (297)
T PLN02583         81 GLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVI-----WRDDNISTQKDVDERSWSDQN  154 (297)
T ss_pred             EEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHhee-----cccccCCCCCCCCcccCCCHH
Confidence            99998653222122356789999999999999998752 367888888654331     22 111123456776543211


Q ss_pred             ----CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 016047          175 ----PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  245 (396)
Q Consensus       175 ----~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  245 (396)
                          ....|+.     |+++.++. +..+++++++||+.|||+..  ....  .+      ..  +....+++ +  ...
T Consensus       155 ~~~~~~~~Y~~sK~~aE~~~~~~~-~~~gi~~v~lrp~~v~Gp~~--~~~~--~~------~~--~~~~~~~~-~--~~~  218 (297)
T PLN02583        155 FCRKFKLWHALAKTLSEKTAWALA-MDRGVNMVSINAGLLMGPSL--TQHN--PY------LK--GAAQMYEN-G--VLV  218 (297)
T ss_pred             HHhhcccHHHHHHHHHHHHHHHHH-HHhCCcEEEEcCCcccCCCC--CCch--hh------hc--CCcccCcc-c--Ccc
Confidence                1113664     55555554 45689999999999999432  1111  11      01  11111121 1  124


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCC
Q 016047          246 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI  296 (396)
Q Consensus       246 ~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~  296 (396)
                      ++|+.|   +|++++.++..+...+ .|+++++....+.++++++.+.+..
T Consensus       219 ~v~V~D---va~a~~~al~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p~  265 (297)
T PLN02583        219 TVDVNF---LVDAHIRAFEDVSSYG-RYLCFNHIVNTEEDAVKLAQMLSPL  265 (297)
T ss_pred             eEEHHH---HHHHHHHHhcCcccCC-cEEEecCCCccHHHHHHHHHHhCCC
Confidence            555544   5899888887655544 6999887666778899999988753

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.94  E-value=4.3e-27  Score=211.53  Aligned_cols=223  Identities=23%  Similarity=0.310  Sum_probs=167.4

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCC--CCCeeEEEecCCChHHHHHHHhcC--CCeeEEEEe
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA--DHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYV  103 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~--~~V~h~a~~  103 (396)
                      |||||||||||++|+++|++     +|++|+.+.|++......  ..+++++.+|+.|.+.+.++++..  |.|+|+|+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLK-----KGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHH-----TTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHH-----cCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence            79999999999999999999     899999999987653210  127899999999999999999887  889999875


Q ss_pred             ccC--CCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          104 TWT--NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       104 ~~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      ...  ....+...++.|+.++.+++++|++.+  +++++++||..       +||..  ...+++|+.+..|...  |+.
T Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~sS~~-------~y~~~--~~~~~~e~~~~~~~~~--Y~~  142 (236)
T PF01370_consen   76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAG--VKRFIFLSSAS-------VYGDP--DGEPIDEDSPINPLSP--YGA  142 (236)
T ss_dssp             SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--TSEEEEEEEGG-------GGTSS--SSSSBETTSGCCHSSH--HHH
T ss_pred             cccccccccccccccccccccccccccccccc--ccccccccccc-------ccccc--cccccccccccccccc--ccc
Confidence            321  112567788999999999999999875  47888777654       45532  2567889888755444  553


Q ss_pred             -----HHHHHHHhhcCCCeeEEEEcCCceeecC-CCC-cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 016047          182 -----EDILFEEVEKKEELSWSVHRPDTIFGFS-PYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  254 (396)
Q Consensus       182 -----e~~l~~~~~~~~~~~~~ilRp~~v~G~~-~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  254 (396)
                           |+++.++. +..+++++++||+.|||+. +.. ...+...+..    ....+.++.+++++.+.++++|+.|+  
T Consensus       143 ~K~~~e~~~~~~~-~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~v~D~--  215 (236)
T PF01370_consen  143 SKRAAEELLRDYA-KKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIR----QALKGKPIKIPGDGSQVRDFIHVDDL--  215 (236)
T ss_dssp             HHHHHHHHHHHHH-HHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHH----HHHTTSSEEEESTSSCEEEEEEHHHH--
T ss_pred             ccccccccccccc-cccccccccccccccccccccccccccccchhhH----HhhcCCcccccCCCCCccceEEHHHH--
Confidence                 66666665 5568999999999999965 112 2222333311    11236667888998888888888776  


Q ss_pred             HHHHHHHHhcCCCCCCceeeec
Q 016047          255 IAEHQIWAAVDPYAKNEAFNCN  276 (396)
Q Consensus       255 la~~~i~~~~~~~~~g~~~ni~  276 (396)
                       |++++.++.++...+++|||+
T Consensus       216 -a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  216 -AEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             -HHHHHHHHHHSCTTTEEEEES
T ss_pred             -HHHHHHHHhCCCCCCCEEEeC
Confidence             888888888766789999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.94  E-value=1.8e-25  Score=210.47  Aligned_cols=266  Identities=16%  Similarity=0.154  Sum_probs=179.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      ++|+||||||+||||++|+++|++     +|  ++|++++|+....     .....+++++.+|++|++.+.+++.++|.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~-----~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLE-----NYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----hCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCE
Confidence            357999999999999999999998     54  7899999875321     11124688999999999999999999999


Q ss_pred             eeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           97 VTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        97 V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      |+|+|+......  .++.+.+++|+.|+.+++++|++.+  +.+++++||..                 +      ..|.
T Consensus        78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~--~~~iV~~SS~~-----------------~------~~p~  132 (324)
T TIGR03589        78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG--VKRVVALSTDK-----------------A------ANPI  132 (324)
T ss_pred             EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeCCC-----------------C------CCCC
Confidence            999988643321  2566789999999999999999864  56788776311                 0      0111


Q ss_pred             CCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC-CceecCCcccccee
Q 016047          175 PNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWECY  246 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~  246 (396)
                      .  .|+.     |+++..+.  ....|++++++||++|||  |+.  +....+ .  .... .+. ++++ +++.+.+.+
T Consensus       133 ~--~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G--~~~--~~i~~~-~--~~~~-~~~~~~~i-~~~~~~r~~  201 (324)
T TIGR03589       133 N--LYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVG--SRG--SVVPFF-K--SLKE-EGVTELPI-TDPRMTRFW  201 (324)
T ss_pred             C--HHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeC--CCC--CcHHHH-H--HHHH-hCCCCeee-CCCCceEee
Confidence            1  2554     44443321  145789999999999999  432  122211 1  1111 233 3343 345556677


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchH
Q 016047          247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  326 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (396)
                      +++.|+   +++++.++.. ...+++|+ +++..+++.|+++.+.+.++......                         
T Consensus       202 i~v~D~---a~a~~~al~~-~~~~~~~~-~~~~~~sv~el~~~i~~~~~~~~~~~-------------------------  251 (324)
T TIGR03589       202 ITLEQG---VNFVLKSLER-MLGGEIFV-PKIPSMKITDLAEAMAPECPHKIVGI-------------------------  251 (324)
T ss_pred             EEHHHH---HHHHHHHHhh-CCCCCEEc-cCCCcEEHHHHHHHHHhhCCeeEeCC-------------------------
Confidence            777776   7777766654 23467884 66677999999999988653321110                         


Q ss_pred             HHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHH
Q 016047          327 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITW  385 (396)
Q Consensus       327 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~  385 (396)
                                 ++....              .....|.+|+++ +||.|++++++++++.
T Consensus       252 -----------~~g~~~--------------~~~~~~~~~~~~~lg~~~~~~l~~~~~~~  286 (324)
T TIGR03589       252 -----------RPGEKL--------------HEVMITEDDARHTYELGDYYAILPSISFW  286 (324)
T ss_pred             -----------CCCchh--------------HhhhcChhhhhhhcCCCCeEEEccccccc
Confidence                       000000              023469999986 6999999999998743

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.94  E-value=1.9e-26  Score=212.69  Aligned_cols=276  Identities=17%  Similarity=0.163  Sum_probs=170.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEEe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV  103 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~~  103 (396)
                      ||||||||+|+||++|+++|.+     +|++|+++.|.              ..|+.|.+.+.+.+..  .|.|+|||+.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~-----~~~~v~~~~r~--------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~   61 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKE-----RGYEVIATSRS--------------DLDLTDPEAVAKLLEAFKPDVVINCAAY   61 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTT-----TSEEEEEESTT--------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred             CEEEEECCCCHHHHHHHHHHhh-----CCCEEEEeCch--------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence            5899999999999999999998     89999999775              6899999999888876  4669999876


Q ss_pred             ccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          104 TWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       104 ~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      +.+...  ++...+++|+.++.+|+++|.+.+.   +++++||..+|.+.         ...|++|++++.|..  .|+.
T Consensus        62 ~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~---~li~~STd~VFdG~---------~~~~y~E~d~~~P~~--~YG~  127 (286)
T PF04321_consen   62 TNVDACEKNPEEAYAINVDATKNLAEACKERGA---RLIHISTDYVFDGD---------KGGPYTEDDPPNPLN--VYGR  127 (286)
T ss_dssp             --HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT----EEEEEEEGGGS-SS---------TSSSB-TTS----SS--HHHH
T ss_pred             ecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC---cEEEeeccEEEcCC---------cccccccCCCCCCCC--HHHH
Confidence            544332  6788999999999999999998753   56666666555332         256789998876654  4887


Q ss_pred             HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 016047          182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  261 (396)
Q Consensus       182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~  261 (396)
                      .|+..|...++..-+..|+|++.+||..   ..++...+...+    ..+.++....+  ++....++.|   +|+.++.
T Consensus       128 ~K~~~E~~v~~~~~~~~IlR~~~~~g~~---~~~~~~~~~~~~----~~~~~i~~~~d--~~~~p~~~~d---lA~~i~~  195 (286)
T PF04321_consen  128 SKLEGEQAVRAACPNALILRTSWVYGPS---GRNFLRWLLRRL----RQGEPIKLFDD--QYRSPTYVDD---LARVILE  195 (286)
T ss_dssp             HHHHHHHHHHHH-SSEEEEEE-SEESSS---SSSHHHHHHHHH----HCTSEEEEESS--CEE--EEHHH---HHHHHHH
T ss_pred             HHHHHHHHHHHhcCCEEEEecceecccC---CCchhhhHHHHH----hcCCeeEeeCC--ceeCCEEHHH---HHHHHHH
Confidence            6655554322222389999999999952   223333332111    23444444433  3344444444   4676666


Q ss_pred             HhcCC---CCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCC
Q 016047          262 AAVDP---YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  338 (396)
Q Consensus       262 ~~~~~---~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  338 (396)
                      ++...   ....++||+++++.+|+.|+++.+++.+|.....+.+           .+..+               .+. 
T Consensus       196 l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~-----------~~~~~---------------~~~-  248 (286)
T PF04321_consen  196 LIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKP-----------VSSSE---------------FPR-  248 (286)
T ss_dssp             HHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEE-----------ESSTT---------------STT-
T ss_pred             HHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEe-----------ccccc---------------CCC-
Confidence            65432   2246899999999999999999999999987633211           11100               000 


Q ss_pred             cccccccccceeehhhhcCc-ccccchhhHhhc-CCCccccCHHHHHHHHHHH
Q 016047          339 PTRLDEVGAWWFVDLVLTGE-AKLASMNKSKEH-GFSGFRNSKNSFITWIDKV  389 (396)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~l-G~~p~~~~~~~~~~~~~~~  389 (396)
                        .             ..++ +..+|++|++.+ |++ ..+.+++|+++++.|
T Consensus       249 --~-------------~~rp~~~~L~~~kl~~~~g~~-~~~~~~~l~~~~~~~  285 (286)
T PF04321_consen  249 --A-------------APRPRNTSLDCRKLKNLLGIK-PPPWREGLEELVKQY  285 (286)
T ss_dssp             --S-------------SGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred             --C-------------CCCCCcccccHHHHHHccCCC-CcCHHHHHHHHHHHh
Confidence              0             0112 567899999986 998 588999999998765

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.94  E-value=1.7e-25  Score=194.81  Aligned_cols=236  Identities=15%  Similarity=0.140  Sum_probs=169.5

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHh-cCCCeeEEEEecc
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLS-QLTDVTHIFYVTW  105 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-~~~~V~h~a~~~~  105 (396)
                      |+|||||||||++|+.+|.+     .||+|++++|++..... ....+.       .-+.+..... ++|.|+|+|+..-
T Consensus         1 IliTGgTGlIG~~L~~~L~~-----~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I   68 (297)
T COG1090           1 ILITGGTGLIGRALTARLRK-----GGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPI   68 (297)
T ss_pred             CeEeccccchhHHHHHHHHh-----CCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCcc
Confidence            68999999999999999999     89999999999865321 011111       1122333334 7999999998643


Q ss_pred             CCC--c--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC--CCcch
Q 016047          106 TNR--S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA--PNFYY  179 (396)
Q Consensus       106 ~~~--~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~--~~~~y  179 (396)
                      ...  .  .....++..+..|+.|+++..+...+++-+++.|.+.+|+.+         .+..++|+.|....  ....+
T Consensus        69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~---------~~~~~tE~~~~g~~Fla~lc~  139 (297)
T COG1090          69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHS---------GDRVVTEESPPGDDFLAQLCQ  139 (297)
T ss_pred             ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCC---------CceeeecCCCCCCChHHHHHH
Confidence            322  2  346678999999999999998776678888887777777543         26778888664321  01123


Q ss_pred             hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 016047          180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  259 (396)
Q Consensus       180 ~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  259 (396)
                      .-|+....+  ...|.+++++|.+.|.|+..|....+...+      ..++|.+   .|++.||.+|+|+.|.   ++++
T Consensus       140 ~WE~~a~~a--~~~gtRvvllRtGvVLs~~GGaL~~m~~~f------k~glGG~---~GsGrQ~~SWIhieD~---v~~I  205 (297)
T COG1090         140 DWEEEALQA--QQLGTRVVLLRTGVVLSPDGGALGKMLPLF------KLGLGGK---LGSGRQWFSWIHIEDL---VNAI  205 (297)
T ss_pred             HHHHHHhhh--hhcCceEEEEEEEEEecCCCcchhhhcchh------hhccCCc---cCCCCceeeeeeHHHH---HHHH
Confidence            335555543  467899999999999995444333333333      2334544   7899999999999887   7788


Q ss_pred             HHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCC
Q 016047          260 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  299 (396)
Q Consensus       260 i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~  299 (396)
                      .++..++...| .||++++.+++.++|.+.+++.++.+..
T Consensus       206 ~fll~~~~lsG-p~N~taP~PV~~~~F~~al~r~l~RP~~  244 (297)
T COG1090         206 LFLLENEQLSG-PFNLTAPNPVRNKEFAHALGRALHRPAI  244 (297)
T ss_pred             HHHHhCcCCCC-cccccCCCcCcHHHHHHHHHHHhCCCcc
Confidence            88877765554 5999999999999999999999987654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=1.7e-24  Score=193.16  Aligned_cols=272  Identities=18%  Similarity=0.230  Sum_probs=194.8

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC--CCeeEEEEec
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYVT  104 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--~~V~h~a~~~  104 (396)
                      +|||||++|++|+.|++.|..      +++|++++|..              +|++|++.+.+.+...  |.|+|+|+.+
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~~------~~~v~a~~~~~--------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt   61 (281)
T COG1091           2 KILITGANGQLGTELRRALPG------EFEVIATDRAE--------------LDITDPDAVLEVIRETRPDVVINAAAYT   61 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhCC------CceEEeccCcc--------------ccccChHHHHHHHHhhCCCEEEECcccc
Confidence            499999999999999999973      57999999862              8999999999999876  6699999877


Q ss_pred             cCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHH
Q 016047          105 WTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE  182 (396)
Q Consensus       105 ~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e  182 (396)
                      .....  ++...+.+|..|+.|+.++|++.+..+.|+   ||..+|-+.         ...|+.|++++.|..  .|+..
T Consensus        62 ~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhi---STDyVFDG~---------~~~~Y~E~D~~~P~n--vYG~s  127 (281)
T COG1091          62 AVDKAESEPELAFAVNATGAENLARAAAEVGARLVHI---STDYVFDGE---------KGGPYKETDTPNPLN--VYGRS  127 (281)
T ss_pred             ccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEe---ecceEecCC---------CCCCCCCCCCCCChh--hhhHH
Confidence            66543  678899999999999999999987555444   444444221         257899999977755  49999


Q ss_pred             HHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 016047          183 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA  262 (396)
Q Consensus       183 ~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~  262 (396)
                      |++.|...+..+-+.+|+|.+++||..+   .||...+...   . ..+.++....+     .+.....+.+||+++..+
T Consensus       128 Kl~GE~~v~~~~~~~~I~Rtswv~g~~g---~nFv~tml~l---a-~~~~~l~vv~D-----q~gsPt~~~dlA~~i~~l  195 (281)
T COG1091         128 KLAGEEAVRAAGPRHLILRTSWVYGEYG---NNFVKTMLRL---A-KEGKELKVVDD-----QYGSPTYTEDLADAILEL  195 (281)
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeeecCCC---CCHHHHHHHH---h-hcCCceEEECC-----eeeCCccHHHHHHHHHHH
Confidence            9998877667778899999999999544   4554444211   1 12444443332     344455666678887776


Q ss_pred             hcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccc
Q 016047          263 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL  342 (396)
Q Consensus       263 ~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  342 (396)
                      +.. ...+++||+++....||.|+++.|.+.++.+.....           +.+..               +++   .+.
T Consensus       196 l~~-~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~-----------~~~~~---------------~~~---~~a  245 (281)
T COG1091         196 LEK-EKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIE-----------PIASA---------------EYP---TPA  245 (281)
T ss_pred             Hhc-cccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccc-----------ccccc---------------ccC---ccC
Confidence            544 344559999998889999999999999997653211           11110               111   111


Q ss_pred             cccccceeehhhhcCc-ccccchhhHhhc-CCCccccCHHHHHHHHHH
Q 016047          343 DEVGAWWFVDLVLTGE-AKLASMNKSKEH-GFSGFRNSKNSFITWIDK  388 (396)
Q Consensus       343 ~~~~~~~~~~~~~~~~-~~~~d~~k~~~l-G~~p~~~~~~~~~~~~~~  388 (396)
                      .+             + +-.+|+.|+++. |++ ..+.+++++++++.
T Consensus       246 ~R-------------P~~S~L~~~k~~~~~g~~-~~~w~~~l~~~~~~  279 (281)
T COG1091         246 KR-------------PANSSLDTKKLEKAFGLS-LPEWREALKALLDE  279 (281)
T ss_pred             CC-------------CcccccchHHHHHHhCCC-CccHHHHHHHHHhh
Confidence            11             1 345799999976 776 67788888777654

>PLN02996 fatty acyl-CoA reductase

Probab=99.94  E-value=5.7e-25  Score=216.78  Aligned_cols=267  Identities=15%  Similarity=0.044  Sum_probs=170.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCC-CCCCCCcEEEEEeCCCCCC---------C-----C--------------CCCCe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN---------W-----N--------------ADHLV   74 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~-~~~~~g~~V~~l~R~~~~~---------~-----~--------------~~~~v   74 (396)
                      .+|+|||||||||||++|+++|++. +.+.   +|+++.|.....         +     .              ...++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~---~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv   86 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVK---KLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV   86 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCC---EEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence            4689999999999999999998863 3322   799999965321         0     0              01578


Q ss_pred             eEEEecCCC-------hHHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecccee
Q 016047           75 EYVQCDVSD-------PEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKH  147 (396)
Q Consensus        75 ~~~~~Dl~d-------~~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~  147 (396)
                      +++.||+++       .+.+..+++++|.|+|+|+.... ..++....++|+.||.+++++|++.. ++++++++||..+
T Consensus        87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~-~~k~~V~vST~~v  164 (491)
T PLN02996         87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-DERYDVALGINTLGALNVLNFAKKCV-KVKMLLHVSTAYV  164 (491)
T ss_pred             EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-cCCHHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEEeeeEE
Confidence            999999984       44567788899999999986543 24677789999999999999998752 4778898888887


Q ss_pred             eccccccccc-CCCCCC--------Ccc-------------------CC-----------CCC-CCCCCcchhHHHHHHH
Q 016047          148 YLGPFEAFGK-IKPYDP--------PFT-------------------ED-----------MPR-LDAPNFYYTLEDILFE  187 (396)
Q Consensus       148 y~ss~~~~g~-~~~~~~--------p~~-------------------E~-----------~p~-~~~~~~~y~~e~~l~~  187 (396)
                      |+......-+ ..+...        ..+                   |+           .+. ....+..|+..|.+.|
T Consensus       165 yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE  244 (491)
T PLN02996        165 CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGE  244 (491)
T ss_pred             ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHH
Confidence            7642111000 000000        000                   00           000 0011123765444444


Q ss_pred             Hhhc--CCCeeEEEEcCCceeecCCCCcchhHHHHHH--HHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 016047          188 EVEK--KEELSWSVHRPDTIFGFSPYSLMNLVGALCV--YAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA  263 (396)
Q Consensus       188 ~~~~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~  263 (396)
                      ....  ..+++++++||++|||+...........+..  .+.+.-+.|....++|++.+.++++++.|+   +.+++.++
T Consensus       245 ~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddv---v~a~l~a~  321 (491)
T PLN02996        245 MLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMV---VNAMIVAM  321 (491)
T ss_pred             HHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHH---HHHHHHHH
Confidence            3321  2479999999999999642211111111000  000111234444678888877777777666   77777666


Q ss_pred             cCC--C-CCCceeeecCC--CeeeHHHHHHHHHHHhCCCC
Q 016047          264 VDP--Y-AKNEAFNCNNG--DVFKWKHLWKVLAEQFGIED  298 (396)
Q Consensus       264 ~~~--~-~~g~~~ni~~~--~~~s~~el~~~l~~~~g~~~  298 (396)
                      ...  . ..+++||++++  .++|+.|+++.+.+.++..+
T Consensus       322 ~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        322 AAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             HHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence            532  1 24689999998  88999999999999887544

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.92  E-value=1.3e-23  Score=201.99  Aligned_cols=227  Identities=19%  Similarity=0.167  Sum_probs=159.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---------CCCCCeeEEEecCCChHHHHHHHh
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ...+++|||||||||||++++++|++     +|++|++++|+.....         ...++++++.+|++|++++..+++
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~  131 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVR-----RGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLF  131 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHH
Confidence            34457999999999999999999998     8999999999763210         012478899999999999999888


Q ss_pred             ----cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           93 ----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                          ++|.|+||++...   ......+++|+.++.+++++|++.+  +++|+++|+..+|       +       |.   
T Consensus       132 ~~~~~~D~Vi~~aa~~~---~~~~~~~~vn~~~~~~ll~aa~~~g--v~r~V~iSS~~v~-------~-------p~---  189 (390)
T PLN02657        132 SEGDPVDVVVSCLASRT---GGVKDSWKIDYQATKNSLDAGREVG--AKHFVLLSAICVQ-------K-------PL---  189 (390)
T ss_pred             HhCCCCcEEEECCccCC---CCCccchhhHHHHHHHHHHHHHHcC--CCEEEEEeecccc-------C-------cc---
Confidence                4888999865321   1223457889999999999999864  6788887753221       1       11   


Q ss_pred             CCCCCCCCcchh---HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc-
Q 016047          169 MPRLDAPNFYYT---LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE-  244 (396)
Q Consensus       169 ~p~~~~~~~~y~---~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~-  244 (396)
                            ..+..+   .|+.+.+   ...+++++|+||+.+||.-    ..+   +    ... ..+.++.+.|++...+ 
T Consensus       190 ------~~~~~sK~~~E~~l~~---~~~gl~~tIlRp~~~~~~~----~~~---~----~~~-~~g~~~~~~GdG~~~~~  248 (390)
T PLN02657        190 ------LEFQRAKLKFEAELQA---LDSDFTYSIVRPTAFFKSL----GGQ---V----EIV-KDGGPYVMFGDGKLCAC  248 (390)
T ss_pred             ------hHHHHHHHHHHHHHHh---ccCCCCEEEEccHHHhccc----HHH---H----Hhh-ccCCceEEecCCccccc
Confidence                  111112   2333332   2478999999999999821    111   1    111 1255655667665432 


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCceeeecCC-CeeeHHHHHHHHHHHhCCCCC
Q 016047          245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDY  299 (396)
Q Consensus       245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~-~~~s~~el~~~l~~~~g~~~~  299 (396)
                      ..+++.|   +|+.++.++.++...+++|||+++ ..+|++|+++++.+.+|.+..
T Consensus       249 ~~I~v~D---lA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~  301 (390)
T PLN02657        249 KPISEAD---LASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPK  301 (390)
T ss_pred             CceeHHH---HHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence            3355544   577777777666667899999986 589999999999999997643

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.92  E-value=8.2e-23  Score=195.72  Aligned_cols=323  Identities=18%  Similarity=0.143  Sum_probs=191.8

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC--------------CC--C-C-CCeeEEEecCCCh--
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN--------------WN--A-D-HLVEYVQCDVSDP--   84 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~--------------~~--~-~-~~v~~~~~Dl~d~--   84 (396)
                      +|||||||||||++|+++|++     +|  ++|+|++|.....              ..  . . .+++++.+|++++  
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~-----~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   75 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLR-----RSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL   75 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHh-----CCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence            589999999999999999998     67  5799999975421              00  0 0 4789999999764  


Q ss_pred             ----HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCC
Q 016047           85 ----EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        85 ----~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          +.+..+..++|.|+|+|+.... ..+.....++|+.|+.+++++|.+.+  .++++++||..+|+...        
T Consensus        76 gl~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~--~~~~v~iSS~~v~~~~~--------  144 (367)
T TIGR01746        76 GLSDAEWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGR--AKPLHYVSTISVLAAID--------  144 (367)
T ss_pred             CcCHHHHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCC--CceEEEEccccccCCcC--------
Confidence                4566777889999999875432 23456677899999999999998764  56688877666553210        


Q ss_pred             CCCCccCCCCCCC---CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          161 YDPPFTEDMPRLD---APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       161 ~~~p~~E~~p~~~---~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                       ..+..|+.+..+   .....|+.     |+++.++.  ..|++++++||+.++|+......+....+...+......+ 
T Consensus       145 -~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~-  220 (367)
T TIGR01746       145 -LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS--DRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG-  220 (367)
T ss_pred             -CCCccccccccccccccCCChHHHHHHHHHHHHHHH--hcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC-
Confidence             112233332211   11223664     55554433  3489999999999999532222111111111111111122 


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCC--CceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCC
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAK--NEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGG  310 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~--g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~  310 (396)
                        .+|.......++   .++++++++++.++..+...  +++||++++..++++|+++.+.+ +|.+..           
T Consensus       221 --~~p~~~~~~~~~---~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~-----------  283 (367)
T TIGR01746       221 --AYPDSPELTEDL---TPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK-----------  283 (367)
T ss_pred             --CCCCCCccccCc---ccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC-----------
Confidence              122221112233   44555688888777654432  78999999999999999999998 876643           


Q ss_pred             CcccCCHHHHhccchHHHHHHHHHh-CCCcccccccccceeehhhhcC---cccccchhhHh----hcCCCccccCHHHH
Q 016047          311 GTQRVKLAEFMKGKEGVWEEIVREN-QLQPTRLDEVGAWWFVDLVLTG---EAKLASMNKSK----EHGFSGFRNSKNSF  382 (396)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~---~~~~~d~~k~~----~lG~~p~~~~~~~~  382 (396)
                         .++.++|+......    .... .....++.  .-+.+.......   ....+++++.+    .+|..+..--.+.+
T Consensus       284 ---~~~~~~w~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (367)
T TIGR01746       284 ---LVSFDEWLQRLEDS----DTAKRDPPRYPLL--PLLHFLGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLL  354 (367)
T ss_pred             ---cCCHHHHHHHHHHh----hhcCCCcccccch--hhhhccCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHH
Confidence               25666766542210    0000 00000110  111111000000   02245666553    24766555577889


Q ss_pred             HHHHHHHhhCCCC
Q 016047          383 ITWIDKVKGFKIV  395 (396)
Q Consensus       383 ~~~~~~~~~~~~~  395 (396)
                      ++++++++..|.+
T Consensus       355 ~~~~~~~~~~~~~  367 (367)
T TIGR01746       355 HLYLQYLKEIGFL  367 (367)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999887754

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.92  E-value=1.5e-22  Score=188.11  Aligned_cols=227  Identities=15%  Similarity=0.066  Sum_probs=144.8

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCee
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVT   98 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~   98 (396)
                      +..+.|+||||||+||||++|+++|++     +|++|+...                 +|+.|.+.+...+.  ++|.|+
T Consensus         5 ~~~~~~kiLVtG~tGfiG~~l~~~L~~-----~g~~V~~~~-----------------~~~~~~~~v~~~l~~~~~D~Vi   62 (298)
T PLN02778          5 AGSATLKFLIYGKTGWIGGLLGKLCQE-----QGIDFHYGS-----------------GRLENRASLEADIDAVKPTHVF   62 (298)
T ss_pred             CCCCCCeEEEECCCCHHHHHHHHHHHh-----CCCEEEEec-----------------CccCCHHHHHHHHHhcCCCEEE
Confidence            445668999999999999999999999     899987432                 34455566666666  578899


Q ss_pred             EEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCC--CCCCccCCCCC
Q 016047           99 HIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP--YDPPFTEDMPR  171 (396)
Q Consensus        99 h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~--~~~p~~E~~p~  171 (396)
                      |+|+......     .++.+.+++|+.||.+|+++|++.+  ++++++ ||..+|+     |+...+  ...+++|++++
T Consensus        63 H~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g--v~~v~~-sS~~vy~-----~~~~~p~~~~~~~~Ee~~p  134 (298)
T PLN02778         63 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG--LVLTNY-ATGCIFE-----YDDAHPLGSGIGFKEEDTP  134 (298)
T ss_pred             ECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCEEEE-ecceEeC-----CCCCCCcccCCCCCcCCCC
Confidence            9998654321     2567889999999999999999875  444443 4333442     111001  12357777654


Q ss_pred             CCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeeccc
Q 016047          172 LDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASD  251 (396)
Q Consensus       172 ~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~d  251 (396)
                      .+. ...|+..|.+.+.+...+ -+..++|+..++|.......++...      +.+  +.++...+     .++.++.|
T Consensus       135 ~~~-~s~Yg~sK~~~E~~~~~y-~~~~~lr~~~~~~~~~~~~~~fi~~------~~~--~~~~~~~~-----~s~~yv~D  199 (298)
T PLN02778        135 NFT-GSFYSKTKAMVEELLKNY-ENVCTLRVRMPISSDLSNPRNFITK------ITR--YEKVVNIP-----NSMTILDE  199 (298)
T ss_pred             CCC-CCchHHHHHHHHHHHHHh-hccEEeeecccCCcccccHHHHHHH------HHc--CCCeeEcC-----CCCEEHHH
Confidence            432 234887666666542222 2567888888788432211122111      111  23322222     13556655


Q ss_pred             HHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCC
Q 016047          252 ADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE  297 (396)
Q Consensus       252 a~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~  297 (396)
                      +   +.+++.++.. .. +++||++++..+|++|+++.+++.+|..
T Consensus       200 ~---v~al~~~l~~-~~-~g~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        200 L---LPISIEMAKR-NL-TGIYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             H---HHHHHHHHhC-CC-CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            4   6666655543 22 4699999999999999999999999864

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=6.9e-24  Score=178.15  Aligned_cols=285  Identities=17%  Similarity=0.200  Sum_probs=197.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC--eeEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD--VTHIF  101 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~--V~h~a  101 (396)
                      ++|||||++|.+|+++.+.+.+     +|.  +=..+.-             .-.+|+++..+.++.++...+  |+|+|
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~-----q~~~~e~wvf~~-------------skd~DLt~~a~t~~lF~~ekPthVIhlA   63 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQE-----QGFDDENWVFIG-------------SKDADLTNLADTRALFESEKPTHVIHLA   63 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHh-----cCCCCcceEEec-------------cccccccchHHHHHHHhccCCceeeehH
Confidence            6999999999999999999998     444  1111111             115899999999999988765  99998


Q ss_pred             EeccCC---CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC----CCCCC
Q 016047          102 YVTWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM----PRLDA  174 (396)
Q Consensus       102 ~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~----p~~~~  174 (396)
                      +.....   ...+.+.+..|+.--.|++..|-+.+  ++++++..|++.|.       .  ....|++|+.    |+.| 
T Consensus        64 AmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g--v~K~vsclStCIfP-------d--kt~yPIdEtmvh~gpphp-  131 (315)
T KOG1431|consen   64 AMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG--VKKVVSCLSTCIFP-------D--KTSYPIDETMVHNGPPHP-  131 (315)
T ss_pred             hhhcchhhcCCCchHHHhhcceechhHHHHHHHhc--hhhhhhhcceeecC-------C--CCCCCCCHHHhccCCCCC-
Confidence            865432   23567889999999999999998876  66666655555442       1  1256788875    3333 


Q ss_pred             CCcchhHHH-HH---HHHhhcCCCeeEEEEcCCceeecCCC-Cc-chh-HHHHHHHHHHhhhcCC-CceecCCcccccee
Q 016047          175 PNFYYTLED-IL---FEEVEKKEELSWSVHRPDTIFGFSPY-SL-MNL-VGALCVYAAVCKHEGI-PLRFPGTKAAWECY  246 (396)
Q Consensus       175 ~~~~y~~e~-~l---~~~~~~~~~~~~~ilRp~~v~G~~~~-~~-~~~-~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~  246 (396)
                      ++++|+..| ++   ..++..+.|..++.+-|+++||+..+ ++ ..+ .+.+..-+...+..+. ++...|++...+.+
T Consensus       132 sN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqF  211 (315)
T KOG1431|consen  132 SNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQF  211 (315)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHH
Confidence            356677544 22   23444688999999999999994332 11 122 2223221222222343 67788999988888


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCceeeecCCC--eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047          247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD--VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  324 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~--~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (396)
                      ++..|.   |+.+++++.+ ...-+..|++.++  .+|++|+++.+.+..+..+...                       
T Consensus       212 iys~DL---A~l~i~vlr~-Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~-----------------------  264 (315)
T KOG1431|consen  212 IYSDDL---ADLFIWVLRE-YEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLV-----------------------  264 (315)
T ss_pred             hhHhHH---HHHHHHHHHh-hcCccceEeccCccceeEHHHHHHHHHHHhCCCceEE-----------------------
Confidence            887775   8888988754 3334557888777  7999999999999999876532                       


Q ss_pred             hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCcccc-CHHHHHHHHHHHhh
Q 016047          325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRN-SKNSFITWIDKVKG  391 (396)
Q Consensus       325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~-~~~~~~~~~~~~~~  391 (396)
                         |+         .++-+  .  .        .+..+|++|++++||.|+++ +++++.++++||.+
T Consensus       265 ---~D---------ttK~D--G--q--------~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~  308 (315)
T KOG1431|consen  265 ---WD---------TTKSD--G--Q--------FKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLD  308 (315)
T ss_pred             ---ee---------ccCCC--C--C--------cccccchHHHHHhCCCcccChHHHHHHHHHHHHHH
Confidence               11         01000  0  0        03457999999999999998 99999999999975

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.89  E-value=1.1e-21  Score=194.84  Aligned_cols=259  Identities=12%  Similarity=0.063  Sum_probs=165.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCC-CCCCCCcEEEEEeCCCCCC---------CC-------------------CCCCee
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN---------WN-------------------ADHLVE   75 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~-~~~~~g~~V~~l~R~~~~~---------~~-------------------~~~~v~   75 (396)
                      +++|||||||||||++|+++|++. +.+   .+|+++.|.....         +.                   ...++.
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v---~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDV---GKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCC---cEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            589999999999999999999962 222   2799999964321         00                   024688


Q ss_pred             EEEecCCCh------HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeec
Q 016047           76 YVQCDVSDP------EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYL  149 (396)
Q Consensus        76 ~~~~Dl~d~------~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~  149 (396)
                      ++.||++++      +..+.+.+.+|.|+|+|+.... ..++....++|+.|+.+++++|++.. ++++++++||..+|+
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f-~~~~~~a~~vNV~GT~nLLelA~~~~-~lk~fV~vSTayVyG  273 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF-DERYDVAIDINTRGPCHLMSFAKKCK-KLKLFLQVSTAYVNG  273 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc-ccCHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEEccCceeec
Confidence            999999987      3556666779999999986543 34577889999999999999998753 477899999888886


Q ss_pred             cccccccc-CCCCCC-----------------Ccc------------CC--C---------C-------CCCCCCcchhH
Q 016047          150 GPFEAFGK-IKPYDP-----------------PFT------------ED--M---------P-------RLDAPNFYYTL  181 (396)
Q Consensus       150 ss~~~~g~-~~~~~~-----------------p~~------------E~--~---------p-------~~~~~~~~y~~  181 (396)
                      ...+.+-+ .++...                 +++            +.  .         +       ..+.++ .|..
T Consensus       274 ~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN-tYt~  352 (605)
T PLN02503        274 QRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD-TYVF  352 (605)
T ss_pred             CCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC-hHHH
Confidence            53212111 111000                 000            00  0         0       011122 3665


Q ss_pred             HHHHHHHhh--cCCCeeEEEEcCCceeec----CCCCcch--hHHHHHHHHHHhhhcCCCceecCCccccceeeecccHH
Q 016047          182 EDILFEEVE--KKEELSWSVHRPDTIFGF----SPYSLMN--LVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDAD  253 (396)
Q Consensus       182 e~~l~~~~~--~~~~~~~~ilRp~~v~G~----~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~  253 (396)
                      .|.+.|...  ...+++++|+||+.|.+.    -||...+  ...++...    -+.|.--.++|+..   ...|+..++
T Consensus       353 TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~----~g~G~lr~~~~~~~---~~~DiVPVD  425 (605)
T PLN02503        353 TKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLY----YGKGQLTGFLADPN---GVLDVVPAD  425 (605)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhh----eeccceeEEEeCCC---eeEeEEeec
Confidence            555554442  234799999999999552    2222222  11222111    11232223566665   556666777


Q ss_pred             HHHHHHHHHhc-C---CCCCCceeeecCC--CeeeHHHHHHHHHHHhCC
Q 016047          254 LIAEHQIWAAV-D---PYAKNEAFNCNNG--DVFKWKHLWKVLAEQFGI  296 (396)
Q Consensus       254 ~la~~~i~~~~-~---~~~~g~~~ni~~~--~~~s~~el~~~l~~~~g~  296 (396)
                      .++.+++.++. .   ....+++||++++  ++++|+++.+.+.+.+..
T Consensus       426 ~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        426 MVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            77888877732 1   1234789999988  889999999999987754

>PRK12320 hypothetical protein; Provisional

Probab=99.88  E-value=8e-21  Score=190.83  Aligned_cols=202  Identities=19%  Similarity=0.192  Sum_probs=136.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  105 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~  105 (396)
                      |+|||||||||||++|+++|++     +||+|++++|.+...  ..++++++.+|+.|+. +.+++.++|.|+|+|+.. 
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~-----~G~~Vi~ldr~~~~~--~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~-   71 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIA-----AGHTVSGIAQHPHDA--LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVD-   71 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEeCChhhc--ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccC-
Confidence            4799999999999999999999     899999999975432  2247889999999985 778888999999998642 


Q ss_pred             CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHH
Q 016047          106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL  185 (396)
Q Consensus       106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l  185 (396)
                        ...   ...+|+.|+.|++++|++.+  + +++++||         .+|.    ..             .+...|.++
T Consensus        72 --~~~---~~~vNv~Gt~nLleAA~~~G--v-RiV~~SS---------~~G~----~~-------------~~~~aE~ll  117 (699)
T PRK12320         72 --TSA---PGGVGITGLAHVANAAARAG--A-RLLFVSQ---------AAGR----PE-------------LYRQAETLV  117 (699)
T ss_pred             --ccc---hhhHHHHHHHHHHHHHHHcC--C-eEEEEEC---------CCCC----Cc-------------cccHHHHHH
Confidence              111   23589999999999999875  3 4666653         2221    00             011235444


Q ss_pred             HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 016047          186 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD  265 (396)
Q Consensus       186 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~  265 (396)
                      .     .++++++++|++++||+  +........+..++. ....+.++          .++|+.|+   +.+++.++..
T Consensus       118 ~-----~~~~p~~ILR~~nVYGp--~~~~~~~r~I~~~l~-~~~~~~pI----------~vIyVdDv---v~alv~al~~  176 (699)
T PRK12320        118 S-----TGWAPSLVIRIAPPVGR--QLDWMVCRTVATLLR-SKVSARPI----------RVLHLDDL---VRFLVLALNT  176 (699)
T ss_pred             H-----hcCCCEEEEeCceecCC--CCcccHhHHHHHHHH-HHHcCCce----------EEEEHHHH---HHHHHHHHhC
Confidence            3     24589999999999994  322211111111111 00112222          23555554   6666666643


Q ss_pred             CCCCCceeeecCCCeeeHHHHHHHHHHH
Q 016047          266 PYAKNEAFNCNNGDVFKWKHLWKVLAEQ  293 (396)
Q Consensus       266 ~~~~g~~~ni~~~~~~s~~el~~~l~~~  293 (396)
                      +  .+++|||++++.+|++|+++++...
T Consensus       177 ~--~~GiyNIG~~~~~Si~el~~~i~~~  202 (699)
T PRK12320        177 D--RNGVVDLATPDTTNVVTAWRLLRSV  202 (699)
T ss_pred             C--CCCEEEEeCCCeeEHHHHHHHHHHh
Confidence            2  2359999999999999998888665

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.87  E-value=1.6e-20  Score=193.57  Aligned_cols=222  Identities=14%  Similarity=0.064  Sum_probs=142.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h~a  101 (396)
                      +.|+||||||+||||++|+++|.+     +|++|..                 ..+|++|.+.+...+.  +.|.|+|||
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~-----~g~~v~~-----------------~~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEK-----QGIAYEY-----------------GKGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHh-----CCCeEEe-----------------eccccccHHHHHHHHHhhCCCEEEECC
Confidence            347899999999999999999998     7888731                 1246788888887776  467799999


Q ss_pred             EeccCC-C----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC--CCCCCccCCCCCCCC
Q 016047          102 YVTWTN-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK--PYDPPFTEDMPRLDA  174 (396)
Q Consensus       102 ~~~~~~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~--~~~~p~~E~~p~~~~  174 (396)
                      +..... .    .++.+.+++|+.|+.+|+++|++.+  ++++ +.||..+|+     |+...  ....|++|++++.+.
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g--~~~v-~~Ss~~v~~-----~~~~~~~~~~~p~~E~~~~~~~  508 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG--LLMM-NFATGCIFE-----YDAKHPEGSGIGFKEEDKPNFT  508 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC--CeEE-EEcccceec-----CCcccccccCCCCCcCCCCCCC
Confidence            865321 1    2567889999999999999999875  4443 334433442     11100  013478888765442


Q ss_pred             CCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 016047          175 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  254 (396)
Q Consensus       175 ~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  254 (396)
                       ...|+..|+..+.+...+ -+..++|+..+||..+....++...+.      + ...++.++.      ...++.++  
T Consensus       509 -~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~------~-~~~~~~vp~------~~~~~~~~--  571 (668)
T PLN02260        509 -GSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKIS------R-YNKVVNIPN------SMTVLDEL--  571 (668)
T ss_pred             -CChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHh------c-cceeeccCC------CceehhhH--
Confidence             234887666666543333 356778888888754433445544331      1 122333332      12233333  


Q ss_pred             HHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhC
Q 016047          255 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG  295 (396)
Q Consensus       255 la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g  295 (396)
                       +.+++.++..  ..+++||++++..+||.|+++.+.+.++
T Consensus       572 -~~~~~~l~~~--~~~giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        572 -LPISIEMAKR--NLRGIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             -HHHHHHHHHh--CCCceEEecCCCcCcHHHHHHHHHHhcC
Confidence             3333433332  3368999999999999999999999874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.86  E-value=9.9e-21  Score=175.27  Aligned_cols=222  Identities=15%  Similarity=0.131  Sum_probs=148.4

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHH------hc-CCCeeE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL------SQ-LTDVTH   99 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~------~~-~~~V~h   99 (396)
                      +||||||||++|++++++|++     .|++|++++|++....  ..+++.+.+|+.|++++.+++      .+ +|.|+|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~-----~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQA-----ASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHh-----CCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence            489999999999999999999     8999999999876432  257788899999999999998      56 788888


Q ss_pred             EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047          100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  179 (396)
Q Consensus       100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y  179 (396)
                      ++..   ...        ....+.+++++|++.+  ++||+++|+...+      .+      .         + ..  .
T Consensus        74 ~~~~---~~~--------~~~~~~~~i~aa~~~g--v~~~V~~Ss~~~~------~~------~---------~-~~--~  116 (285)
T TIGR03649        74 VAPP---IPD--------LAPPMIKFIDFARSKG--VRRFVLLSASIIE------KG------G---------P-AM--G  116 (285)
T ss_pred             eCCC---CCC--------hhHHHHHHHHHHHHcC--CCEEEEeeccccC------CC------C---------c-hH--H
Confidence            7431   111        1235568999999875  8899987642111      00      0         0 00  1


Q ss_pred             hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 016047          180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  259 (396)
Q Consensus       180 ~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  259 (396)
                      ..++.+.+    ..+++++++||+.+++..... . ....      +. ..+ ++ +.+.+.....++++.|   +|+++
T Consensus       117 ~~~~~l~~----~~gi~~tilRp~~f~~~~~~~-~-~~~~------~~-~~~-~~-~~~~g~~~~~~v~~~D---va~~~  178 (285)
T TIGR03649       117 QVHAHLDS----LGGVEYTVLRPTWFMENFSEE-F-HVEA------IR-KEN-KI-YSATGDGKIPFVSADD---IARVA  178 (285)
T ss_pred             HHHHHHHh----ccCCCEEEEeccHHhhhhccc-c-cccc------cc-cCC-eE-EecCCCCccCcccHHH---HHHHH
Confidence            12333222    248999999999888621100 0 0000      11 112 22 2233444445555555   47777


Q ss_pred             HHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhc
Q 016047          260 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  322 (396)
Q Consensus       260 i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (396)
                      ..++.++...++.||+++++.+|++|+++.+.+.+|.+...            ..++.+++.+
T Consensus       179 ~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~------------~~~~~~~~~~  229 (285)
T TIGR03649       179 YRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITH------------VKLTEEELAQ  229 (285)
T ss_pred             HHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEE------------EeCCHHHHHH
Confidence            77666666667889999999999999999999999987654            4566666554

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.85  E-value=2.4e-21  Score=174.10  Aligned_cols=226  Identities=20%  Similarity=0.172  Sum_probs=143.5

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCee----EEEecCCChHHHHHHHh--
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVE----YVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~----~~~~Dl~d~~~~~~~~~--   92 (396)
                      ||||||+|.||+.|+++|++.    +-.+|++++|+....      .   ...+++.    .+.+|+.|.+.+..+++  
T Consensus         1 VLVTGa~GSIGseL~rql~~~----~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRY----GPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCC----B-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--
T ss_pred             CEEEccccHHHHHHHHHHHhc----CCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc
Confidence            799999999999999999983    124799999985321      1   1223454    35899999999999999  


Q ss_pred             cCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           93 QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      +.|.|||.|+.-+++  ..++.+..++|+.||+|++++|.+++  +++|+++||.+..                      
T Consensus        77 ~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~--v~~~v~ISTDKAv----------------------  132 (293)
T PF02719_consen   77 KPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG--VERFVFISTDKAV----------------------  132 (293)
T ss_dssp             T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT---SEEEEEEECGCS----------------------
T ss_pred             CCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEccccccC----------------------
Confidence            778899998875543  34889999999999999999999975  8999998854321                      


Q ss_pred             CCCCCCcchhH-----HHHHHHHhhcCC---CeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          171 RLDAPNFYYTL-----EDILFEEVEKKE---ELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       171 ~~~~~~~~y~~-----e~~l~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                       .|.+.  |+.     |+++..+. ...   +..++++|+|+|.|.. |+..   ..|..  ++.  .+.|+.... ..-
T Consensus       133 -~Ptnv--mGatKrlaE~l~~~~~-~~~~~~~t~f~~VRFGNVlgS~-GSVi---p~F~~--Qi~--~g~PlTvT~-p~m  199 (293)
T PF02719_consen  133 -NPTNV--MGATKRLAEKLVQAAN-QYSGNSDTKFSSVRFGNVLGSR-GSVI---PLFKK--QIK--NGGPLTVTD-PDM  199 (293)
T ss_dssp             -S--SH--HHHHHHHHHHHHHHHC-CTSSSS--EEEEEEE-EETTGT-TSCH---HHHHH--HHH--TTSSEEECE-TT-
T ss_pred             -CCCcH--HHHHHHHHHHHHHHHh-hhCCCCCcEEEEEEecceecCC-CcHH---HHHHH--HHH--cCCcceeCC-CCc
Confidence             12222  664     55555443 323   5899999999999932 2221   22211  122  366766543 345


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047          243 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED  298 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~  298 (396)
                      .+.+..+.+|..|+   +.++.. ...|++|..--|.++++.|+++.+.+..|..+
T Consensus       200 tRffmti~EAv~Lv---l~a~~~-~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~  251 (293)
T PF02719_consen  200 TRFFMTIEEAVQLV---LQAAAL-AKGGEIFVLDMGEPVKILDLAEAMIELSGLEP  251 (293)
T ss_dssp             EEEEE-HHHHHHHH---HHHHHH---TTEEEEE---TCEECCCHHHHHHHHTT-EE
T ss_pred             EEEEecHHHHHHHH---HHHHhh-CCCCcEEEecCCCCcCHHHHHHHHHhhccccc
Confidence            57888888884443   333221 34688998888899999999999999998653

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.84  E-value=1.4e-19  Score=165.37  Aligned_cols=253  Identities=18%  Similarity=0.093  Sum_probs=151.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------------C--CCCCCeeEEEecCCCh----
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------------W--NADHLVEYVQCDVSDP----   84 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~--~~~~~v~~~~~Dl~d~----   84 (396)
                      ++||+||||||+|.+|+++|+...    ..+|+|++|..+..               |  ....+|+++.||+..+    
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~----~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL   76 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRS----DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL   76 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcC----CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence            589999999999999999999842    24899999976521               1  1236899999999965    


Q ss_pred             --HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047           85 --EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        85 --~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        ..++++...+|.|+|+++... +..++.+.+..||.||+.+++.|...  +.|.+.|+||+.++..-....+     .
T Consensus        77 ~~~~~~~La~~vD~I~H~gA~Vn-~v~pYs~L~~~NVlGT~evlrLa~~g--k~Kp~~yVSsisv~~~~~~~~~-----~  148 (382)
T COG3320          77 SERTWQELAENVDLIIHNAALVN-HVFPYSELRGANVLGTAEVLRLAATG--KPKPLHYVSSISVGETEYYSNF-----T  148 (382)
T ss_pred             CHHHHHHHhhhcceEEecchhhc-ccCcHHHhcCcchHhHHHHHHHHhcC--CCceeEEEeeeeeccccccCCC-----c
Confidence              467777788999999987543 23467888999999999999988764  4667777777666543211111     1


Q ss_pred             CCccCCCCCCC---CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC-C
Q 016047          163 PPFTEDMPRLD---APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-P  233 (396)
Q Consensus       163 ~p~~E~~p~~~---~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~  233 (396)
                      ...+|+.|...   ....+|++     |+++.++.  +.|++++|+||+.|.|.+..+.+|....+..++..+..+|. |
T Consensus       149 ~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~--~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P  226 (382)
T COG3320         149 VDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG--DRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP  226 (382)
T ss_pred             cccccccccccccCccCCCcchhHHHHHHHHHHHh--hcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC
Confidence            11223333221   11234554     56666554  34899999999999997653333332222222222333332 2


Q ss_pred             -ceecCCccccceeeeccc--HHHHHHHHHHHhcCCCCCCceee-ecCCCeeeHHHHHHHHHH
Q 016047          234 -LRFPGTKAAWECYSIASD--ADLIAEHQIWAAVDPYAKNEAFN-CNNGDVFKWKHLWKVLAE  292 (396)
Q Consensus       234 -~~~~g~~~~~~~~~~~~d--a~~la~~~i~~~~~~~~~g~~~n-i~~~~~~s~~el~~~l~~  292 (396)
                       ..+.-+...-++..+...  +..+++++..+..++......|+ ..-+..+...++.+-+.+
T Consensus       227 ~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         227 DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             CcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence             111111111112222222  23344333333323333333344 233778899998888877

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.84  E-value=3.3e-19  Score=170.20  Aligned_cols=229  Identities=17%  Similarity=0.146  Sum_probs=166.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHhc-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ-   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~~-   93 (396)
                      .+|+||||||+|-||+.+++++++. .   --+++.++|+..+.         .....++.++-||+.|.+.+..++.+ 
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~-~---p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~  324 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKF-N---PKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH  324 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhc-C---CCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence            3689999999999999999999984 1   12799999986432         11236788999999999999999999 


Q ss_pred             -CCCeeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           94 -LTDVTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        94 -~~~V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                       +|.|||.|+.-+++..  +|.+.+++||.||.|+++||.+.+  +++|+.+|+.+.                       
T Consensus       325 kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~--V~~~V~iSTDKA-----------------------  379 (588)
T COG1086         325 KVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG--VKKFVLISTDKA-----------------------  379 (588)
T ss_pred             CCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC--CCEEEEEecCcc-----------------------
Confidence             8889999987666543  899999999999999999999875  899998874321                       


Q ss_pred             CCCCCCcchhH-----HHHHHHHhhcCC--CeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcccc
Q 016047          171 RLDAPNFYYTL-----EDILFEEVEKKE--ELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAW  243 (396)
Q Consensus       171 ~~~~~~~~y~~-----e~~l~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~  243 (396)
                      ..|.+.  |+.     |+.+..+..+..  +..++++|.|+|.|  .++..   .+++. ..|.+  |.|+++. +..-.
T Consensus       380 V~PtNv--mGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG--SrGSV---iPlFk-~QI~~--GgplTvT-dp~mt  448 (588)
T COG1086         380 VNPTNV--MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG--SRGSV---IPLFK-KQIAE--GGPLTVT-DPDMT  448 (588)
T ss_pred             cCCchH--hhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec--CCCCC---HHHHH-HHHHc--CCCcccc-CCCce
Confidence            123233  554     555554432123  48999999999999  33221   22211 11233  5665543 34445


Q ss_pred             ceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCC
Q 016047          244 ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI  296 (396)
Q Consensus       244 ~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~  296 (396)
                      +.+..+.+|..|   ++.+. .-...|++|-+--|+++++.|+++.+.+..|.
T Consensus       449 RyfMTI~EAv~L---VlqA~-a~~~gGeifvldMGepvkI~dLAk~mi~l~g~  497 (588)
T COG1086         449 RFFMTIPEAVQL---VLQAG-AIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQ  497 (588)
T ss_pred             eEEEEHHHHHHH---HHHHH-hhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence            788999998443   33333 22567899999889999999999999999983

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.83  E-value=1.5e-18  Score=193.04  Aligned_cols=336  Identities=16%  Similarity=0.148  Sum_probs=193.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------------CC--CCCCeeEEEecCCCh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------------WN--ADHLVEYVQCDVSDP---   84 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------------~~--~~~~v~~~~~Dl~d~---   84 (396)
                      .++|||||||||+|++|+++|++.... ..++|+|+.|.....               +.  ...+++++.+|+.++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~-~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSN-SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCC-CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            479999999999999999999973210 137899999974321               00  013688999999754   


Q ss_pred             ---HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC--
Q 016047           85 ---EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK--  159 (396)
Q Consensus        85 ---~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~--  159 (396)
                         +.+.++..++|.|+|+|+..... .+.......|+.||.+++++|++.  ++++++++||..+|+..  .+....  
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~~~~--~~~~~~~~ 1124 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHWV-YPYSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSALDTE--YYVNLSDE 1124 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecCc-cCHHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeecCcc--cccchhhh
Confidence               55667778899999998865422 234555678999999999999875  36788888887777432  111100  


Q ss_pred             ---CCCCCccCCCCCCC---CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhh
Q 016047          160 ---PYDPPFTEDMPRLD---APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK  228 (396)
Q Consensus       160 ---~~~~p~~E~~p~~~---~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~  228 (396)
                         .....+.|+.+..+   .....|+.     |+++.++  .+.|++++++||+.|||++.....+....+...+....
T Consensus      1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~--~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~ 1202 (1389)
T TIGR03443      1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREA--GKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCI 1202 (1389)
T ss_pred             hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHH--HhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHH
Confidence               00112334432211   12234775     4444443  23589999999999999643332222222211111111


Q ss_pred             hcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhh
Q 016047          229 HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEE  306 (396)
Q Consensus       229 ~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~  306 (396)
                      ..+.   +| +....+   +..++++++++++.++..+.  ..+.+||++++..+++.++++.+.+ +|.+.        
T Consensus      1203 ~~~~---~p-~~~~~~---~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~-------- 1266 (1389)
T TIGR03443      1203 QLGL---IP-NINNTV---NMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKT-YGYDV-------- 1266 (1389)
T ss_pred             HhCC---cC-CCCCcc---ccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCC--------
Confidence            1221   12 112223   34445566888888776543  2346899999889999999999976 35443        


Q ss_pred             cCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeeh-hhhcCcccccchhhHhh-c-------CCCcc--
Q 016047          307 EGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVD-LVLTGEAKLASMNKSKE-H-------GFSGF--  375 (396)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~-l-------G~~p~--  375 (396)
                            ..++..+|.......    ....+ ...++.....+ |.+ .........+|.++.++ +       |....  
T Consensus      1267 ------~~~~~~~w~~~l~~~----~~~~~-~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 1334 (1389)
T TIGR03443      1267 ------EIVDYVHWRKSLERF----VIERS-EDNALFPLLHF-VLDDLPQSTKAPELDDTNAATSLKADAAWTGVDVSSG 1334 (1389)
T ss_pred             ------CccCHHHHHHHHHHh----ccccC-ccchhhhHHHH-hhccCcccccCCCCCCHHHHHHHHhhcccccCCCcCC
Confidence                  234556665532100    00000 00011000000 000 00011134567777765 3       22222  


Q ss_pred             -ccCHHHHHHHHHHHhhCCCCC
Q 016047          376 -RNSKNSFITWIDKVKGFKIVP  396 (396)
Q Consensus       376 -~~~~~~~~~~~~~~~~~~~~~  396 (396)
                       .-.++-|+.+++++++.|++|
T Consensus      1335 ~~~~~~~~~~~~~~~~~~~~l~ 1356 (1389)
T TIGR03443      1335 AGVTEEQIGIYIAYLVKVGFLP 1356 (1389)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCC
Confidence             235678889999999888875

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.83  E-value=1.7e-20  Score=170.00  Aligned_cols=166  Identities=25%  Similarity=0.239  Sum_probs=93.1

Q ss_pred             EEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC------------CC--------CCCCeeEEEecCCCh---
Q 016047           30 IVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN------------WN--------ADHLVEYVQCDVSDP---   84 (396)
Q Consensus        30 VtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~------------~~--------~~~~v~~~~~Dl~d~---   84 (396)
                      |||||||+|++|+++|++     .+.  +|+|+.|.....            ..        ...+++++.||++++   
T Consensus         1 lTGaTGflG~~ll~~Ll~-----~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG   75 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLR-----QPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG   75 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHH-----HS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred             CcCCCcHHHHHHHHHHHc-----CCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence            799999999999999998     343  899999976321            00        146999999999986   


Q ss_pred             ---HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047           85 ---EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        85 ---~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         +++..+.+.+|.|+|+|+...... +..+.+++||.||+++++.|.+..  .++++|+||..+.+.   ..+..  .
T Consensus        76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~-~~~~~~~~NV~gt~~ll~la~~~~--~~~~~~iSTa~v~~~---~~~~~--~  147 (249)
T PF07993_consen   76 LSDEDYQELAEEVDVIIHCAASVNFNA-PYSELRAVNVDGTRNLLRLAAQGK--RKRFHYISTAYVAGS---RPGTI--E  147 (249)
T ss_dssp             --HHHHHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS----TTT----
T ss_pred             CChHHhhccccccceeeecchhhhhcc-cchhhhhhHHHHHHHHHHHHHhcc--CcceEEeccccccCC---CCCcc--c
Confidence               456667788999999988644332 556688999999999999999643  337777776221111   11110  0


Q ss_pred             CCC--ccCCCC-CCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecC
Q 016047          162 DPP--FTEDMP-RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFS  209 (396)
Q Consensus       162 ~~p--~~E~~p-~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~  209 (396)
                      +..  ..+... ........|.+     |+++.++. ++.|++++|+||+.|+|..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~-~~~g~p~~I~Rp~~i~g~~  202 (249)
T PF07993_consen  148 EKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAA-QRHGLPVTIYRPGIIVGDS  202 (249)
T ss_dssp             SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHH-HHH---EEEEEE-EEE-SS
T ss_pred             ccccccccccchhhccCCccHHHHHHHHHHHHHHHH-hcCCceEEEEecCcccccC
Confidence            111  111111 11112335775     55555544 3458999999999999953

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.83  E-value=3.9e-19  Score=151.60  Aligned_cols=246  Identities=19%  Similarity=0.216  Sum_probs=164.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC------CCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN------ADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~------~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      |-.||||-||.-|++|++.|++     +||+|+++.|+++..       +.      .........+|++|...+.+.+.
T Consensus        29 kvALITGItGQDGSYLaEfLL~-----KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~  103 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLS-----KGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS  103 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHh-----CCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence            4679999999999999999999     899999999986532       11      11356688999999999999998


Q ss_pred             cCCC--eeEEEEeccCCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceee-cccccccccCCCCCCCccC
Q 016047           93 QLTD--VTHIFYVTWTNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY-LGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        93 ~~~~--V~h~a~~~~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y-~ss~~~~g~~~~~~~p~~E  167 (396)
                      -+.+  |+|+|+.+++..+  -++..-++...||..||+|.+..+.       ...+..| .|+++.||..  .+.|.+|
T Consensus       104 ~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l-------~~~VrfYQAstSElyGkv--~e~PQsE  174 (376)
T KOG1372|consen  104 TIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRL-------TEKVRFYQASTSELYGKV--QEIPQSE  174 (376)
T ss_pred             ccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCc-------ccceeEEecccHhhcccc--cCCCccc
Confidence            8776  9999998776543  3455567888999999999887531       1222333 4667789975  3778999


Q ss_pred             CCCCCCCCCcchhHHHHHHHHh----hcCCCeeEEEEcCCceeec-CCCCcchhH-HHHHHHHH-HhhhcCCCceecCCc
Q 016047          168 DMPRLDAPNFYYTLEDILFEEV----EKKEELSWSVHRPDTIFGF-SPYSLMNLV-GALCVYAA-VCKHEGIPLRFPGTK  240 (396)
Q Consensus       168 ~~p~~~~~~~~y~~e~~l~~~~----~~~~~~~~~ilRp~~v~G~-~~~~~~~~~-~~~~~~~~-i~~~~~~~~~~~g~~  240 (396)
                      .+|+.|.++  |+..|+..-.+    .+.+++=   ..-+.++-. +|+..-++. ..+....+ |..+.. .-...|+.
T Consensus       175 ~TPFyPRSP--Ya~aKmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqq-e~~~LGNL  248 (376)
T KOG1372|consen  175 TTPFYPRSP--YAAAKMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQ-EKIELGNL  248 (376)
T ss_pred             CCCCCCCCh--hHHhhhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcce-eeEEecch
Confidence            999998777  66555432111    0111110   001223332 355555553 33333222 322222 23557888


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCC
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGI  296 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~  296 (396)
                      +..++|.+..|.   +++| |.+++.+. .+.|-|+.++..|++|+++......|.
T Consensus       249 ~a~RDWGhA~dY---VEAM-W~mLQ~d~-PdDfViATge~hsVrEF~~~aF~~ig~  299 (376)
T KOG1372|consen  249 SALRDWGHAGDY---VEAM-WLMLQQDS-PDDFVIATGEQHSVREFCNLAFAEIGE  299 (376)
T ss_pred             hhhcccchhHHH---HHHH-HHHHhcCC-CCceEEecCCcccHHHHHHHHHHhhCc
Confidence            877777776665   5554 44444333 345999999999999999998888874

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.80  E-value=9.6e-18  Score=146.12  Aligned_cols=236  Identities=15%  Similarity=0.134  Sum_probs=164.8

Q ss_pred             cccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C---CCCCCeeEEEecCCChHHHHH
Q 016047           16 EEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W---NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        16 ~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~---~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      ...+++...+--+-|+|||||+|.+++.+|.+     .|-+|++--|..+..   .   -+...+-+...|+.|++++++
T Consensus        52 GtGGRsS~sGiVaTVFGAtGFlGryvvnklak-----~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~  126 (391)
T KOG2865|consen   52 GTGGRSSVSGIVATVFGATGFLGRYVVNKLAK-----MGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRA  126 (391)
T ss_pred             CCCCcccccceEEEEecccccccHHHHHHHhh-----cCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHH
Confidence            33444444455678999999999999999999     788999999975432   1   112346688999999999999


Q ss_pred             HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                      +++..+.|+++.+.-+..  ......++|+.+.+.|...|++++  +.+++.+|+          .|..      +.   
T Consensus       127 vvk~sNVVINLIGrd~eT--knf~f~Dvn~~~aerlAricke~G--VerfIhvS~----------Lgan------v~---  183 (391)
T KOG2865|consen  127 VVKHSNVVINLIGRDYET--KNFSFEDVNVHIAERLARICKEAG--VERFIHVSC----------LGAN------VK---  183 (391)
T ss_pred             HHHhCcEEEEeecccccc--CCcccccccchHHHHHHHHHHhhC--hhheeehhh----------cccc------cc---
Confidence            999999999998753322  224456899999999999999986  788887662          2211      00   


Q ss_pred             CCCCC--CCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCC-cccccee
Q 016047          170 PRLDA--PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT-KAAWECY  246 (396)
Q Consensus       170 p~~~~--~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~-~~~~~~~  246 (396)
                        .+.  -...+..|+.+.++.     -..||+||+.|||...+. .+      .|+.+.+..+ +++..+. ......-
T Consensus       184 --s~Sr~LrsK~~gE~aVrdaf-----PeAtIirPa~iyG~eDrf-ln------~ya~~~rk~~-~~pL~~~GekT~K~P  248 (391)
T KOG2865|consen  184 --SPSRMLRSKAAGEEAVRDAF-----PEATIIRPADIYGTEDRF-LN------YYASFWRKFG-FLPLIGKGEKTVKQP  248 (391)
T ss_pred             --ChHHHHHhhhhhHHHHHhhC-----CcceeechhhhcccchhH-HH------HHHHHHHhcC-ceeeecCCcceeecc
Confidence              000  012244466666543     468999999999943221 11      2222334333 3333332 2344456


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCC
Q 016047          247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE  297 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~  297 (396)
                      +++.|+   |++++.++.++.+.|++|..++++.+.+.|+++.+-+..-.-
T Consensus       249 VyV~DV---aa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~~  296 (391)
T KOG2865|consen  249 VYVVDV---AAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMAREW  296 (391)
T ss_pred             EEEehH---HHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhhc
Confidence            677776   888999899999999999999999999999999998877653

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.79  E-value=2.3e-18  Score=156.31  Aligned_cols=225  Identities=15%  Similarity=0.141  Sum_probs=141.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCC-hHHHHHHH-hcCCCeeE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSD-PEETQAKL-SQLTDVTH   99 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d-~~~~~~~~-~~~~~V~h   99 (396)
                      +++||||||||+||++|+++|++     +||+|++++|++...   .....+++++.+|+.| .+.+.+.+ .++|.|+|
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~   91 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLA-----KGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVIC   91 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHh-----CCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEE
Confidence            47999999999999999999998     799999999976432   1112468999999998 46777777 68898888


Q ss_pred             EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCc-c
Q 016047          100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF-Y  178 (396)
Q Consensus       100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~-~  178 (396)
                      +++....  .++...+++|..++.++++++++.+  +++++++||..+|+..       .  ..+..+...  ....+ .
T Consensus        92 ~~g~~~~--~~~~~~~~~n~~~~~~ll~a~~~~~--~~~iV~iSS~~v~g~~-------~--~~~~~~~~~--~~~~~~~  156 (251)
T PLN00141         92 ATGFRRS--FDPFAPWKVDNFGTVNLVEACRKAG--VTRFILVSSILVNGAA-------M--GQILNPAYI--FLNLFGL  156 (251)
T ss_pred             CCCCCcC--CCCCCceeeehHHHHHHHHHHHHcC--CCEEEEEccccccCCC-------c--ccccCcchh--HHHHHHH
Confidence            7653211  1223345789999999999998754  6788988866555321       0  111111100  00010 0


Q ss_pred             hhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 016047          179 YTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  258 (396)
Q Consensus       179 y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  258 (396)
                      +...+...+.+.++.+++++++||+.+++.....  .                 ....++.. .+...+   +..++|+.
T Consensus       157 ~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~--~-----------------~~~~~~~~-~~~~~i---~~~dvA~~  213 (251)
T PLN00141        157 TLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTG--N-----------------IVMEPEDT-LYEGSI---SRDQVAEV  213 (251)
T ss_pred             HHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCc--e-----------------EEECCCCc-cccCcc---cHHHHHHH
Confidence            1123333332225678999999999999832110  0                 00011110 001122   44556888


Q ss_pred             HHHHhcCCCCCCceeeecCC--C-eeeHHHHHHHHHH
Q 016047          259 QIWAAVDPYAKNEAFNCNNG--D-VFKWKHLWKVLAE  292 (396)
Q Consensus       259 ~i~~~~~~~~~g~~~ni~~~--~-~~s~~el~~~l~~  292 (396)
                      ++.++..+...+.++.+.+.  . ..++++++..+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        214 AVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             HHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            88887776666777888862  2 3789988887764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.77  E-value=1.4e-18  Score=149.95  Aligned_cols=150  Identities=24%  Similarity=0.333  Sum_probs=108.4

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEeccCC
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTN  107 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~~~  107 (396)
                      |+|+||||++|++|+++|++     +|++|++++|++.+... ..+++++.+|+.|++++.+++.++|.|+|+++.   .
T Consensus         1 I~V~GatG~vG~~l~~~L~~-----~~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~---~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLR-----RGHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP---P   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHH-----TTSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS---T
T ss_pred             eEEECCCChHHHHHHHHHHH-----CCCEEEEEecCchhccc-ccccccceeeehhhhhhhhhhhhcchhhhhhhh---h
Confidence            79999999999999999999     78999999999764321 479999999999999999999999999998642   1


Q ss_pred             CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHHHH
Q 016047          108 RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFE  187 (396)
Q Consensus       108 ~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l~~  187 (396)
                      ..        ....+++++++|++.+  +++++++|+...|...          ........+  +....++...+...+
T Consensus        72 ~~--------~~~~~~~~~~a~~~~~--~~~~v~~s~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~e~  129 (183)
T PF13460_consen   72 PK--------DVDAAKNIIEAAKKAG--VKRVVYLSSAGVYRDP----------PGLFSDEDK--PIFPEYARDKREAEE  129 (183)
T ss_dssp             TT--------HHHHHHHHHHHHHHTT--SSEEEEEEETTGTTTC----------TSEEEGGTC--GGGHHHHHHHHHHHH
T ss_pred             cc--------cccccccccccccccc--cccceeeeccccCCCC----------Ccccccccc--cchhhhHHHHHHHHH
Confidence            11        2788889999999875  7788888865544321          111111111  111122332333334


Q ss_pred             HhhcCCCeeEEEEcCCceeecC
Q 016047          188 EVEKKEELSWSVHRPDTIFGFS  209 (396)
Q Consensus       188 ~~~~~~~~~~~ilRp~~v~G~~  209 (396)
                      .+ ++.+++|+++||+.+||..
T Consensus       130 ~~-~~~~~~~~ivrp~~~~~~~  150 (183)
T PF13460_consen  130 AL-RESGLNWTIVRPGWIYGNP  150 (183)
T ss_dssp             HH-HHSTSEEEEEEESEEEBTT
T ss_pred             HH-HhcCCCEEEEECcEeEeCC
Confidence            43 4568999999999999953

...

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.76  E-value=1.3e-17  Score=163.13  Aligned_cols=227  Identities=15%  Similarity=0.100  Sum_probs=143.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC----------CCCCeeEEEecCCChHH
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN----------ADHLVEYVQCDVSDPEE   86 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~----------~~~~v~~~~~Dl~d~~~   86 (396)
                      .++++||||||+|+||++++++|++     .|++|++++|+....      ..          ...+++++.+|+.|.++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk-----~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLK-----LGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            3568999999999999999999999     899999999975421      00          01357899999999999


Q ss_pred             HHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           87 TQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        87 ~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      +.+++.++|.|+|+++.......+....+++|+.|+.+++++|++.+  +.+|+++||...+     ..+      .+  
T Consensus       153 I~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag--VgRIV~VSSiga~-----~~g------~p--  217 (576)
T PLN03209        153 IGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK--VNHFILVTSLGTN-----KVG------FP--  217 (576)
T ss_pred             HHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC--CCEEEEEccchhc-----ccC------cc--
Confidence            99999999999999774322112345567899999999999998764  6788888754321     011      00  


Q ss_pred             CCCCCCCCCCcch-hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 016047          167 EDMPRLDAPNFYY-TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  245 (396)
Q Consensus       167 E~~p~~~~~~~~y-~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  245 (396)
                      +. ...  ....| ...+.+++.+ ...|++|++|||+.+.++  .........+      .       ...++ .....
T Consensus       218 ~~-~~~--sk~~~~~~KraaE~~L-~~sGIrvTIVRPG~L~tp--~d~~~~t~~v------~-------~~~~d-~~~gr  277 (576)
T PLN03209        218 AA-ILN--LFWGVLCWKRKAEEAL-IASGLPYTIVRPGGMERP--TDAYKETHNL------T-------LSEED-TLFGG  277 (576)
T ss_pred             cc-chh--hHHHHHHHHHHHHHHH-HHcCCCEEEEECCeecCC--ccccccccce------e-------ecccc-ccCCC
Confidence            00 000  11112 2233344444 567899999999999873  2111000000      0       00000 00001


Q ss_pred             eeecccHHHHHHHHHHHhcCCC-CCCceeeecCCCeeeHHHHHHHHHH
Q 016047          246 YSIASDADLIAEHQIWAAVDPY-AKNEAFNCNNGDVFKWKHLWKVLAE  292 (396)
Q Consensus       246 ~~~~~da~~la~~~i~~~~~~~-~~g~~~ni~~~~~~s~~el~~~l~~  292 (396)
                      .   ..-.++|+.+++++.++. ..+.+|.+.++.......+.+.+.+
T Consensus       278 ~---isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~  322 (576)
T PLN03209        278 Q---VSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAK  322 (576)
T ss_pred             c---cCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHh
Confidence            1   223446888888887554 5689999998764433444444433

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.73  E-value=6.5e-17  Score=148.97  Aligned_cols=229  Identities=13%  Similarity=0.071  Sum_probs=142.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      |.|+||||||+|+||++++++|++     +|++|++++|++...  .  ....++.++++|++|.+++.+++.       
T Consensus         1 m~k~vlVtGasg~IG~~la~~L~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (276)
T PRK06482          1 MSKTWFITGASSGFGRGMTERLLA-----RGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALG   75 (276)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999     899999999975321  0  012468899999999988877664       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.|+|+++......      ......+++|+.++.++++++.+.  .....+++++||...+       .     .. 
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~-----~~-  142 (276)
T PRK06482         76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ-------I-----AY-  142 (276)
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc-------c-----CC-
Confidence            3688999987543221      134567889999999999997432  1124677777642110       0     00 


Q ss_pred             ccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCce---eecCCCCc--ch-h-HHHHHHHHHHhhhc
Q 016047          165 FTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTI---FGFSPYSL--MN-L-VGALCVYAAVCKHE  230 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v---~G~~~~~~--~~-~-~~~~~~~~~i~~~~  230 (396)
                           |  +  ...|+.     +.++..+..  ..++++++++||+.+   ||.+....  .. . ......+   .+..
T Consensus       143 -----~--~--~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~  210 (276)
T PRK06482        143 -----P--G--FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDL---RRAL  210 (276)
T ss_pred             -----C--C--CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHH---HHHH
Confidence                 0  1  112554     333333221  246899999999987   65321110  00 0 0001001   1111


Q ss_pred             -CCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhC
Q 016047          231 -GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG  295 (396)
Q Consensus       231 -~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g  295 (396)
                       ..++.         .   ..|.++++.+++.++..+ ..+..||++++...++.|+++.+.+.++
T Consensus       211 ~~~~~~---------~---~~d~~~~~~a~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        211 ADGSFA---------I---PGDPQKMVQAMIASADQT-PAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             hhccCC---------C---CCCHHHHHHHHHHHHcCC-CCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence             10101         0   134556688888877543 3356799999988899888888877664

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.72  E-value=1.1e-17  Score=150.12  Aligned_cols=224  Identities=16%  Similarity=0.197  Sum_probs=140.1

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |+||||||.+|+++++.|++     .+++|++++|++.+..   ....+++++.+|+.|++++.++++++|.|+.+... 
T Consensus         1 I~V~GatG~~G~~v~~~L~~-----~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~-   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLS-----AGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP-   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHH-----TTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC-
T ss_pred             CEEECCccHHHHHHHHHHHh-----CCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc-
Confidence            79999999999999999999     7999999999874321   12257889999999999999999999998877321 


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  184 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~  184 (396)
                        ..       ...+....++++||++++  ++||++.+           ++..    .  .+.....|. ...+.....
T Consensus        75 --~~-------~~~~~~~~~li~Aa~~ag--Vk~~v~ss-----------~~~~----~--~~~~~~~p~-~~~~~~k~~  125 (233)
T PF05368_consen   75 --SH-------PSELEQQKNLIDAAKAAG--VKHFVPSS-----------FGAD----Y--DESSGSEPE-IPHFDQKAE  125 (233)
T ss_dssp             --SC-------CCHHHHHHHHHHHHHHHT---SEEEESE-----------ESSG----T--TTTTTSTTH-HHHHHHHHH
T ss_pred             --ch-------hhhhhhhhhHHHhhhccc--cceEEEEE-----------eccc----c--ccccccccc-chhhhhhhh
Confidence              11       223455678999999986  99998654           1110    0  111111111 111333444


Q ss_pred             HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 016047          185 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV  264 (396)
Q Consensus       185 l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~  264 (396)
                      +++++ ++.+++++++||+..+...       ...+.... ..+.....+.+++++.....+.  .+..++++....++.
T Consensus       126 ie~~l-~~~~i~~t~i~~g~f~e~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~Dvg~~va~il~  194 (233)
T PF05368_consen  126 IEEYL-RESGIPYTIIRPGFFMENL-------LPPFAPVV-DIKKSKDVVTLPGPGNQKAVPV--TDTRDVGRAVAAILL  194 (233)
T ss_dssp             HHHHH-HHCTSEBEEEEE-EEHHHH-------HTTTHHTT-CSCCTSSEEEEETTSTSEEEEE--EHHHHHHHHHHHHHH
T ss_pred             hhhhh-hhccccceeccccchhhhh-------hhhhcccc-cccccceEEEEccCCCcccccc--ccHHHHHHHHHHHHc
Confidence            45554 5559999999988766621       11010000 0000011234555554323332  344455666666666


Q ss_pred             CCCCC--CceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047          265 DPYAK--NEAFNCNNGDVFKWKHLWKVLAEQFGIED  298 (396)
Q Consensus       265 ~~~~~--g~~~ni~~~~~~s~~el~~~l~~~~g~~~  298 (396)
                      ++...  ++.+++++ +.+|+.|+++.+.+.+|.+.
T Consensus       195 ~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v  229 (233)
T PF05368_consen  195 DPEKHNNGKTIFLAG-ETLTYNEIAAILSKVLGKKV  229 (233)
T ss_dssp             SGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHHTSEE
T ss_pred             ChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHHCCcc
Confidence            65544  67777765 88999999999999999874

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK09135 pteridine reductase; Provisional

Probab=99.69  E-value=1.1e-15  Score=138.43  Aligned_cols=214  Identities=16%  Similarity=0.137  Sum_probs=129.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCeeEEEecCCChHHHHHHHhc-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLSQ-   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~~~~~~~~-   93 (396)
                      +.++||||||+|+||++++++|++     +|++|++++|+....       .  .....+.++.+|++|.+++..+++. 
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   79 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHA-----AGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAAC   79 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            457999999999999999999998     899999999864221       0  0113578899999999988877764 


Q ss_pred             ------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCC
Q 016047           94 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        94 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                            +|.|+|+++......      .+....+++|+.|+.++++++.+.- ..-..++.++       +  .      
T Consensus        80 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~-------~--~------  144 (249)
T PRK09135         80 VAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNIT-------D--I------  144 (249)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEe-------C--h------
Confidence                  588999987532211      1346678999999999999987541 1112222221       1  1      


Q ss_pred             CCCCccCCCCCCCCCCcchhH-----HHHHHHHhhc-CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  234 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  234 (396)
                           .++.|..+...  |+.     |.++..+..+ ..+++++++||+.++|+.....++   ...... ...  ..++
T Consensus       145 -----~~~~~~~~~~~--Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~---~~~~~~-~~~--~~~~  211 (249)
T PRK09135        145 -----HAERPLKGYPV--YCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFD---EEARQA-ILA--RTPL  211 (249)
T ss_pred             -----hhcCCCCCchh--HHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCC---HHHHHH-HHh--cCCc
Confidence                 11222222222  553     4444444311 236999999999999954222111   111100 011  1111


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC-CCCCceeeecCCCeee
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP-YAKNEAFNCNNGDVFK  282 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~-~~~g~~~ni~~~~~~s  282 (396)
                      ...+            +.+++|+++.+++.+. ...|++||++++..++
T Consensus       212 ~~~~------------~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        212 KRIG------------TPEDIAEAVRFLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             CCCc------------CHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence            1111            2355577775655432 3468999999887654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.67  E-value=1.2e-15  Score=145.03  Aligned_cols=255  Identities=20%  Similarity=0.222  Sum_probs=157.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCC-CCCCCCcEEEEEeCCCCCC--------C--------------CCCCCeeEEEec
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN--------W--------------NADHLVEYVQCD   80 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~-~~~~~g~~V~~l~R~~~~~--------~--------------~~~~~v~~~~~D   80 (396)
                      .+|+|+|||||||+|.-|++.|+.. +.+.   +|+.+.|.....        +              ....++..+.||
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~---~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVK---RIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcc---eEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            4689999999999999999999974 3332   799999975422        0              012467789999


Q ss_pred             CCCh------HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccc
Q 016047           81 VSDP------EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEA  154 (396)
Q Consensus        81 l~d~------~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~  154 (396)
                      +.++      .+++...+.++.|+|+|+..... +..+....+|..||+++++.|++. ++++-++++|+..+..    .
T Consensus        88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrFd-e~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~n~----~  161 (467)
T KOG1221|consen   88 ISEPDLGISESDLRTLADEVNIVIHSAATVRFD-EPLDVALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYSNC----N  161 (467)
T ss_pred             ccCcccCCChHHHHHHHhcCCEEEEeeeeeccc-hhhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhheec----c
Confidence            9876      35666778889999999864332 344566789999999999999986 4688888887644331    1


Q ss_pred             cccCCCCCCCcc------------CCC---------CCC--CCCCc-chh---HHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          155 FGKIKPYDPPFT------------EDM---------PRL--DAPNF-YYT---LEDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       155 ~g~~~~~~~p~~------------E~~---------p~~--~~~~~-~y~---~e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      -+...+..-|..            |+.         |..  ..++. .|.   .|.++.+   ...++|.+|+||+.|..
T Consensus       162 ~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~---~~~~lPivIiRPsiI~s  238 (467)
T KOG1221|consen  162 VGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQK---EAENLPLVIIRPSIITS  238 (467)
T ss_pred             cccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHh---hccCCCeEEEcCCceec
Confidence            111110000111            110         000  01222 222   2555554   35679999999999988


Q ss_pred             cC----CCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc--CCC---CCCceeeecCC
Q 016047          208 FS----PYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV--DPY---AKNEAFNCNNG  278 (396)
Q Consensus       208 ~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~--~~~---~~g~~~ni~~~  278 (396)
                      ..    ||+..+.-.+..+.+  .-+.|.--.+.++.+   +..|+..+|.++.+++.++-  ...   ....+||++++
T Consensus       239 t~~EP~pGWidn~~gp~g~i~--g~gkGvlr~~~~d~~---~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss  313 (467)
T KOG1221|consen  239 TYKEPFPGWIDNLNGPDGVII--GYGKGVLRCFLVDPK---AVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSS  313 (467)
T ss_pred             cccCCCCCccccCCCCceEEE--EeccceEEEEEEccc---cccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEeccc
Confidence            53    232222211110000  001121112334333   66778888888888886652  111   12469999986


Q ss_pred             C--eeeHHHHHHHHHHHhC
Q 016047          279 D--VFKWKHLWKVLAEQFG  295 (396)
Q Consensus       279 ~--~~s~~el~~~l~~~~g  295 (396)
                      .  +++|+++.+...+.+-
T Consensus       314 ~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  314 NDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             ccCcccHHHHHHHHHHhcc
Confidence            4  5999999999988875

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.6e-15  Score=139.70  Aligned_cols=237  Identities=14%  Similarity=-0.033  Sum_probs=140.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      |+++||||||+|+||++++++|++     +|++|++++|++...    ......+.++++|++|++++.+++.       
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALE-----RGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999998     899999999975321    0012357789999999988776655       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.|+|+++......      ++....+++|+.++.++++++.+.  ..+..+++++||...+       ..     .+
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~-------~~-----~~  144 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGI-------SA-----FP  144 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc-------CC-----CC
Confidence            3577999987543211      145677899999998888776322  1124567776643222       11     00


Q ss_pred             ccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceec
Q 016047          165 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  237 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  237 (396)
                              .  ...|+..|.     ...+.  ....|++++++||+.+.....+...........+..+......     
T Consensus       145 --------~--~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-----  209 (275)
T PRK08263        145 --------M--SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE-----  209 (275)
T ss_pred             --------C--ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH-----
Confidence                    0  112553222     22221  1346899999999988763221110000000000000000000     


Q ss_pred             CCccccceeeec-ccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCC
Q 016047          238 GTKAAWECYSIA-SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE  297 (396)
Q Consensus       238 g~~~~~~~~~~~-~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~  297 (396)
                        ..   ....+ .+..++++.++.++..+...++.|+...+..+++.++.+.+.++.+.+
T Consensus       210 --~~---~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (275)
T PRK08263        210 --QW---SERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEEWE  265 (275)
T ss_pred             --HH---HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHHHH
Confidence              00   00112 445666888888777655555655444446789999999998875443

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.5e-15  Score=136.07  Aligned_cols=217  Identities=22%  Similarity=0.176  Sum_probs=132.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +++++|||||+|+||.+++++|++     +|++|++++|+....       +. ...++.++.+|++|++++..+++   
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~-----~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAG-----AGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAR   79 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            358999999999999999999998     899999999875321       00 12357789999999998877665   


Q ss_pred             ----cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           93 ----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                          .+|.|+|+|+.......++...+++|+.++.++++++.+...+-.+++++||...      .+.       +..+.
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~------~~~-------~~~~~  146 (248)
T PRK07806         80 EEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQA------HFI-------PTVKT  146 (248)
T ss_pred             HhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchh------hcC-------ccccC
Confidence                4677888876432222245567889999999999999875222246666654211      110       00111


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCc-
Q 016047          169 MPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK-  240 (396)
Q Consensus       169 ~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~-  240 (396)
                      .|.    ...|+.     |.++..+..  ...++++++++|+.+-++.       ...+      ... ..    ++.. 
T Consensus       147 ~~~----~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~-------~~~~------~~~-~~----~~~~~  204 (248)
T PRK07806        147 MPE----YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTV-------TATL------LNR-LN----PGAIE  204 (248)
T ss_pred             Ccc----ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCch-------hhhh------hcc-CC----HHHHH
Confidence            111    112553     444433321  3467999999988776621       0111      000 00    0000 


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCe
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDV  280 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~  280 (396)
                      ..........++.++|+++++++......|++|++++++.
T Consensus       205 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        205 ARREAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGADY  244 (248)
T ss_pred             HHHhhhcccCCHHHHHHHHHHHhhccccCccEEEecCccc
Confidence            0001112344556668888888876666799999998764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.64  E-value=1.1e-14  Score=131.92  Aligned_cols=160  Identities=14%  Similarity=-0.006  Sum_probs=108.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .++++||||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|+.|++++.++++   
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAA-----DGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGV   78 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999     899999999974321      0 012358899999999998887775   


Q ss_pred             ----cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.|+|+++.....    .  .+....+.+|+.++.++++++...  ..+..+++++|+...+       +    
T Consensus        79 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~-------~----  147 (251)
T PRK12826         79 EDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP-------R----  147 (251)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh-------c----
Confidence                467799998653321    1  134667899999999999988532  1225567766643221       0    


Q ss_pred             CCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                        .+      ...  ...|+.     +.++..+.  ....+++++++||+.++|+
T Consensus       148 --~~------~~~--~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~  192 (251)
T PRK12826        148 --VG------YPG--LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTP  192 (251)
T ss_pred             --cC------CCC--ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcc
Confidence              00      001  112443     33333322  1345899999999999994

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.62  E-value=1.1e-14  Score=132.92  Aligned_cols=160  Identities=13%  Similarity=0.016  Sum_probs=104.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      ++++|||||+|+||++++++|++     .|++|++++|++...      .. ...++.++++|++|.+.+.+++..    
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELAR-----AGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999998     899999999976321      00 123577899999999988776654    


Q ss_pred             ---CCCeeEEEEeccCCC------ccHHHHHHhHHHH----HHHHHHHH-cccCCCcceEEEeccceeecccccccccCC
Q 016047           94 ---LTDVTHIFYVTWTNR------STEAENCKINGSM----FRNVLRAV-IPNAPNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~-~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                         +|.|+|+++......      +.....+++|+.+    ++++++++ ++.  ...+++++||...+      ++   
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~~~~iv~~ss~~~~------~~---  150 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD--RGGVVIYMGSVHSH------EA---  150 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc--CCcEEEEEcchhhc------CC---
Confidence               688999987543211      1345667899999    77777777 433  35677777642111      11   


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                         .+.     ...........+.+++.+..  ...+++++++||+.++++
T Consensus       151 ---~~~-----~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~  193 (262)
T PRK13394        151 ---SPL-----KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTP  193 (262)
T ss_pred             ---CCC-----CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccch
Confidence               000     00100111112333322221  346899999999999994

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=1.1e-14  Score=131.56  Aligned_cols=211  Identities=18%  Similarity=0.113  Sum_probs=129.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +.++||||||||+||++|+++|++     +|++|+++.|+....       . ....+++++.+|+.|++++.++++   
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   79 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLAR-----AGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAV   79 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHH
Confidence            347999999999999999999999     899998888765321       0 112468899999999998877765   


Q ss_pred             ----cCCCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.|+|+++......    .  .....+++|+.++.++++++.+.  .....+++++||...+      ++    
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~------~~----  149 (249)
T PRK12825         80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGL------PG----  149 (249)
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccC------CC----
Confidence                3578999987432211    1  34567899999999999887432  1125677777643222      11    


Q ss_pred             CCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                        .+        .  ...|+.     +.++..+.  ....+++++++||+.++|+.....  ..... .    ...... 
T Consensus       150 --~~--------~--~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~-~----~~~~~~-  209 (249)
T PRK12825        150 --WP--------G--RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT--IEEAR-E----AKDAET-  209 (249)
T ss_pred             --CC--------C--chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc--cchhH-H----hhhccC-
Confidence              00        1  111443     33333222  134689999999999999431111  11101 0    000001 


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCe
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  280 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~  280 (396)
                       +. +      .+   ...+++++.+.+++.+.  ...|++|+++++..
T Consensus       210 -~~-~------~~---~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        210 -PL-G------RS---GTPEDIARAVAFLCSDASDYITGQVIEVTGGVD  247 (249)
T ss_pred             -CC-C------CC---cCHHHHHHHHHHHhCccccCcCCCEEEeCCCEe
Confidence             11 1      12   23344577777776543  34589999998754

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.61  E-value=4.1e-14  Score=130.33  Aligned_cols=229  Identities=14%  Similarity=0.102  Sum_probs=139.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC---CCCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +++||||||+|+||++++++|++     +|++|++++|++...      ..   ...++.++.+|+.|++++.++++   
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVA-----AGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAAT   81 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            58999999999999999999998     899999999875321      00   01367889999999998877666   


Q ss_pred             ----cCCCeeEEEEeccC---C--Cc--cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCC
Q 016047           93 ----QLTDVTHIFYVTWT---N--RS--TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~---~--~~--~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                          .+|.|+|+++....   .  .+  .....+++|+.++.++++++.+..  .+-.+++++||...+       .   
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~-------~---  151 (276)
T PRK05875         82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS-------N---  151 (276)
T ss_pred             HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc-------C---
Confidence                56889999874311   1  11  345678899999999998776541  112356666542211       1   


Q ss_pred             CCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                        ..      +  +  ...|+.     +.++..+..  ...+++++++||+.+.++....... ......  ...  ...
T Consensus       152 --~~------~--~--~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~--~~~--~~~  214 (276)
T PRK05875        152 --TH------R--W--FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSA--DYR--ACT  214 (276)
T ss_pred             --CC------C--C--CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHH--HHH--cCC
Confidence              00      0  1  112543     333333221  2457999999999887632111000 000000  000  011


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCC--CCceeeecCCCee----eHHHHHHHHHHHhCCC
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYA--KNEAFNCNNGDVF----KWKHLWKVLAEQFGIE  297 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~--~g~~~ni~~~~~~----s~~el~~~l~~~~g~~  297 (396)
                      ++.         .+   .+..++|.++++++..+..  .|++||+.++..+    +..|+++.+....|..
T Consensus       215 ~~~---------~~---~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  273 (276)
T PRK05875        215 PLP---------RV---GEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR  273 (276)
T ss_pred             CCC---------CC---cCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence            111         12   2244557777777765443  3899999988776    7777777777655543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.60  E-value=1.2e-13  Score=126.89  Aligned_cols=224  Identities=16%  Similarity=0.105  Sum_probs=145.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  105 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~  105 (396)
                      ++|||||||||+|++++++|++     .||+|++++|++........++++..+|+.++..+..++.+.+.++++.....
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~-----~~~~v~~~~r~~~~~~~~~~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~   75 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLA-----RGHEVRAAVRNPEAAAALAGGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD   75 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHh-----CCCEEEEEEeCHHHHHhhcCCcEEEEeccCCHhHHHHHhccccEEEEEecccc
Confidence            4799999999999999999999     89999999999764311116899999999999999999999998888855322


Q ss_pred             CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHH
Q 016047          106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL  185 (396)
Q Consensus       106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l  185 (396)
                         .+. ...........+..+++.   ..+.++++.|          +.+..     .         .+...|...+..
T Consensus        76 ---~~~-~~~~~~~~~~~~~a~~a~---~~~~~~~~~s----------~~~~~-----~---------~~~~~~~~~~~~  124 (275)
T COG0702          76 ---GSD-AFRAVQVTAVVRAAEAAG---AGVKHGVSLS----------VLGAD-----A---------ASPSALARAKAA  124 (275)
T ss_pred             ---ccc-chhHHHHHHHHHHHHHhc---CCceEEEEec----------cCCCC-----C---------CCccHHHHHHHH
Confidence               111 233444455545555444   2366676554          33310     0         111225544444


Q ss_pred             HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC
Q 016047          186 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD  265 (396)
Q Consensus       186 ~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~  265 (396)
                      .+......|++++++|+..+|... ....   ...      ....+.++...+.+  ....+.   .++++..+..+...
T Consensus       125 ~e~~l~~sg~~~t~lr~~~~~~~~-~~~~---~~~------~~~~~~~~~~~~~~--~~~~i~---~~d~a~~~~~~l~~  189 (275)
T COG0702         125 VEAALRSSGIPYTTLRRAAFYLGA-GAAF---IEA------AEAAGLPVIPRGIG--RLSPIA---VDDVAEALAAALDA  189 (275)
T ss_pred             HHHHHHhcCCCeEEEecCeeeecc-chhH---HHH------HHhhCCceecCCCC--ceeeeE---HHHHHHHHHHHhcC
Confidence            443336678999999977766611 1110   000      11223332222222  123333   34446665555666


Q ss_pred             CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCC
Q 016047          266 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYG  300 (396)
Q Consensus       266 ~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~  300 (396)
                      +...+++|.+++++..+..++...+.+..|.+...
T Consensus       190 ~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         190 PATAGRTYELAGPEALTLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             CcccCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence            66778999999998999999999999999988765

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.8e-14  Score=131.25  Aligned_cols=230  Identities=13%  Similarity=0.065  Sum_probs=138.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ-----   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   93 (396)
                      |.+++|||||+|+||.+++++|++     +|++|++++|++...     .....+++++.+|+.|.+++..++..     
T Consensus         1 ~~k~ilItGat~~iG~~la~~L~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (257)
T PRK07074          1 TKRTALVTGAAGGIGQALARRFLA-----AGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER   75 (257)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999998     899999999975421     01123678999999999988776654     


Q ss_pred             --CCCeeEEEEeccCCC---c---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCC
Q 016047           94 --LTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        94 --~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                        +|.|+|+++......   .   .....+.+|+.++.++++++...  ..+..+++++||...+.    .+|       
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~-------  144 (257)
T PRK07074         76 GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA----ALG-------  144 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC----CCC-------
Confidence              688999987532211   1   12344679999999998887432  11235677666421110    111       


Q ss_pred             CccCCCCCCCCCCcchhHHHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047          164 PFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  241 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  241 (396)
                           .+  .........+.++..+..  ...++++..+||+.++++.-.........+..  ...  ...+        
T Consensus       145 -----~~--~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~--~~~~--------  205 (257)
T PRK07074        145 -----HP--AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFE--ELK--KWYP--------  205 (257)
T ss_pred             -----Cc--ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHH--HHH--hcCC--------
Confidence                 01  101111222333333221  34579999999999988421111000011100  000  0101        


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeHHHHHHHHHH
Q 016047          242 AWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKHLWKVLAE  292 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~~el~~~l~~  292 (396)
                       ...+.+   +++++.++++++...  ...|+++++.++...+.+||.+.+.+
T Consensus       206 -~~~~~~---~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        206 -LQDFAT---PDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             -CCCCCC---HHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence             112333   444577878777542  33478899988888999999988754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.59  E-value=8.6e-15  Score=133.04  Aligned_cols=156  Identities=14%  Similarity=0.093  Sum_probs=101.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-----CCCCCeeEEEecCCChHHHHHHHh------
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----NADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-----~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      ++||||||+|+||++|+++|++     +|++|++++|++...  .     ....++.++.+|+.|++++.++++      
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAA-----AGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF   76 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6899999999999999999998     899999999975321  0     012367889999999986655443      


Q ss_pred             -cCCCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 -QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                       .+|.|+|+++......    +  +....+.+|+.|+.++++++...  .....+++++|+...+      .+      .
T Consensus        77 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~------~~------~  144 (255)
T TIGR01963        77 GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGL------VA------S  144 (255)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc------CC------C
Confidence             4577999887533211    1  23556789999988888877432  1235677777643211      11      0


Q ss_pred             CccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          164 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                      +.        ...  |..     +.+...+.  ....+++++++||+.++++
T Consensus       145 ~~--------~~~--y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~  186 (255)
T TIGR01963       145 PF--------KSA--YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTP  186 (255)
T ss_pred             CC--------Cch--hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence            10        011  332     22232221  0235899999999999993

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.59  E-value=1.3e-14  Score=132.17  Aligned_cols=156  Identities=15%  Similarity=0.048  Sum_probs=102.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +++||||||+|+||++++++|++     +|++|++++|++...      . ....+++++.+|++|++++.+++.     
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAK-----EGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET   78 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999     899999999976431      0 012467889999999998877666     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.|+|+++......      ......+++|+.++.++++++...  ..+..+++++||...+      ++.     
T Consensus        79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~------~~~-----  147 (258)
T PRK12429         79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGL------VGS-----  147 (258)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhc------cCC-----
Confidence              4677999877433211      123456789999955555544332  1236778877653222      110     


Q ss_pred             CCccCCCCCCCCCCcchhH-----H---HHHHHHhhcCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----E---DILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e---~~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                       +        ..+.  |+.     +   +.+.... ...++.+.++||+.+.++
T Consensus       148 -~--------~~~~--y~~~k~a~~~~~~~l~~~~-~~~~i~v~~~~pg~v~~~  189 (258)
T PRK12429        148 -A--------GKAA--YVSAKHGLIGLTKVVALEG-ATHGVTVNAICPGYVDTP  189 (258)
T ss_pred             -C--------Ccch--hHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCCCcch
Confidence             0        0011  332     2   2222222 456899999999999984

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=9.1e-14  Score=126.46  Aligned_cols=158  Identities=17%  Similarity=0.100  Sum_probs=105.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      |+|+||||||+|+||++++++|++     +|++|++++|+....       . ....++.++++|++|++++.++++   
T Consensus         1 ~~k~vlItG~sg~iG~~la~~L~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (256)
T PRK12745          1 MRPVALVTGGRRGIGLGIARALAA-----AGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQ   75 (256)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            568999999999999999999999     899999999865321       0 012468899999999988766554   


Q ss_pred             ----cCCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc---CC-----CcceEEEeccceeecccc
Q 016047           93 ----QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN---AP-----NLRHVCLQTGTKHYLGPF  152 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~---~~-----~~~~~~~~s~~~~y~ss~  152 (396)
                          .+|.|+|+++......        ......+++|+.++.++++++.+.   ..     ...+++++||...+    
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----  151 (256)
T PRK12745         76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI----  151 (256)
T ss_pred             HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc----
Confidence                4577999987532211        134567899999999998887543   11     14567766643211    


Q ss_pred             cccccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          153 EAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       153 ~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                        ++.        .      +...  |+.     +.++..+..  ...+++++++||+.+.++
T Consensus       152 --~~~--------~------~~~~--Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~  196 (256)
T PRK12745        152 --MVS--------P------NRGE--YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTD  196 (256)
T ss_pred             --cCC--------C------CCcc--cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCc
Confidence              110        0      1111  432     333332221  246899999999999884

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.59  E-value=6.9e-14  Score=118.24  Aligned_cols=249  Identities=12%  Similarity=0.064  Sum_probs=151.4

Q ss_pred             CcccccccccccccccccCcCCCCCCEEEEEcCCChhHHHHHH-----HcCCCCCCCCCcEEEEEeCCCCCCCCCCCCee
Q 016047            1 MSWWWAGAIGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAE-----ILPLPDTPGGPWKVYGVARRPKPNWNADHLVE   75 (396)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~-----~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~   75 (396)
                      |+|++.+.++..             ++.++-+++|+|+..|..     ++-+ +.++..|+|+.++|.+.+.     ++.
T Consensus         1 ~~w~~~~~~~~s-------------r~a~~~~~~g~i~~nl~~~~~~~H~t~-~~~a~~h~vtv~sR~pg~~-----rit   61 (315)
T KOG3019|consen    1 KVWFSFFNSGKS-------------RDAVSNWSNGIIRENLGSETSCCHDTN-VHSADNHAVTVLSRSPGKA-----RIT   61 (315)
T ss_pred             CccceeecCCcc-------------ccCCCCccccchhccccCcccccccCC-CCcccccceEEEecCCCCc-----ccc
Confidence            678776665544             445566889999988876     3333 2222469999999998652     333


Q ss_pred             EEEecCCChHHHHHHHhcCCCeeEEEEecc----CCCc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeec
Q 016047           76 YVQCDVSDPEETQAKLSQLTDVTHIFYVTW----TNRS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYL  149 (396)
Q Consensus        76 ~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~----~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~  149 (396)
                      +-+.|..-..      -.|+.+++.++...    ..+.  -..+.....+..|+.|.++...+-...+-++.++++.+|.
T Consensus        62 w~el~~~Gip------~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~  135 (315)
T KOG3019|consen   62 WPELDFPGIP------ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYV  135 (315)
T ss_pred             cchhcCCCCc------eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEec
Confidence            3333322111      01222222222111    1122  2344556667778889999988743455678889888885


Q ss_pred             ccccccccCCCCCCCccCCCCCCCCCCcchhH--HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHh
Q 016047          150 GPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC  227 (396)
Q Consensus       150 ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~--e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~  227 (396)
                      -|.         ...++|+.+....+  +.+.  -++-..+.......+.+++|.+.|.|.+.+....+..+|      .
T Consensus       136 pS~---------s~eY~e~~~~qgfd--~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF------~  198 (315)
T KOG3019|consen  136 PSE---------SQEYSEKIVHQGFD--ILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPF------Q  198 (315)
T ss_pred             ccc---------ccccccccccCChH--HHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhh------h
Confidence            431         23455655433211  1111  222222222234489999999999996544333333333      2


Q ss_pred             hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047          228 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIED  298 (396)
Q Consensus       228 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~  298 (396)
                      -+.|.|   .|++.|+..|+|+.|.   +..+.++..+ ....++.|-+.+++.+..||++.+.+.++.+.
T Consensus       199 ~g~GGP---lGsG~Q~fpWIHv~DL---~~li~~ale~-~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~  262 (315)
T KOG3019|consen  199 MGAGGP---LGSGQQWFPWIHVDDL---VNLIYEALEN-PSVKGVINGVAPNPVRNGEFCQQLGSALSRPS  262 (315)
T ss_pred             hccCCc---CCCCCeeeeeeehHHH---HHHHHHHHhc-CCCCceecccCCCccchHHHHHHHHHHhCCCc
Confidence            344656   7889999999999887   4444444444 45567899999999999999999999999774

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.57  E-value=7.9e-14  Score=125.82  Aligned_cols=157  Identities=17%  Similarity=0.101  Sum_probs=105.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      +++||||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|+.|++++..++++    
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAA-----DGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999998     899999999986431      0 0123577899999999888776654    


Q ss_pred             ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                         +|.|+|+++......      +.....++.|+.++.++++++...  ..+..+++++|+...      .++.     
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~------~~~~-----  148 (246)
T PRK05653         80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG------VTGN-----  148 (246)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh------ccCC-----
Confidence               478999987532211      123556899999999999888543  123567777764211      1110     


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                               .+...  |..     +.+.....  ....+++++++||+.++|+
T Consensus       149 ---------~~~~~--y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~  190 (246)
T PRK05653        149 ---------PGQTN--YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTD  190 (246)
T ss_pred             ---------CCCcH--hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCc
Confidence                     01111  332     33333322  1346899999999999994

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.9e-14  Score=130.32  Aligned_cols=159  Identities=14%  Similarity=0.070  Sum_probs=105.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .++++||||||+|+||++++++|++     +|++|++++|+....     .....++.++.+|++|++++.++++     
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAE-----AGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3458999999999999999999998     899999999975321     0011256889999999998877664     


Q ss_pred             --cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEeccceeecccccccccCCC
Q 016047           93 --QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                        ++|.|+|+++......       ++..+.+++|+.++.++++++.+.  ..+. .+++++|+..      ..+|.   
T Consensus        84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~------~~~~~---  154 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVA------GRLGY---  154 (264)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccc------cccCC---
Confidence              5788999987541111       134677899999999999987542  1112 4455544211      01110   


Q ss_pred             CCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                         +        ....  |+.     +.++.....  ...+++++++||+.++|+
T Consensus       155 ---~--------~~~~--y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~  196 (264)
T PRK12829        155 ---P--------GRTP--YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGP  196 (264)
T ss_pred             ---C--------CCch--hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCCh
Confidence               0        0011  443     333333221  245899999999999994

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.57  E-value=2.7e-14  Score=130.10  Aligned_cols=158  Identities=11%  Similarity=0.007  Sum_probs=105.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      ++++||||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|++++.+++.       
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLA-----EGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999     8999999998754210    012357889999999988877665       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                      .+|.++|+++......      .+....+++|+.++.++++++.+..   ..-.+++++||..      ..++.      
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~------~~~~~------  147 (257)
T PRK07067         80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQA------GRRGE------  147 (257)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHH------hCCCC------
Confidence            3677999887532211      1456678999999999999886531   1123566665321      01110      


Q ss_pred             CccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          164 PFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                            +  +  ...|+.     +.+.+....  ...++++++++|+.|+++
T Consensus       148 ------~--~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~  189 (257)
T PRK07067        148 ------A--L--VSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTP  189 (257)
T ss_pred             ------C--C--CchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccch
Confidence                  0  1  112443     223222211  356899999999999993

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.56  E-value=6.2e-14  Score=127.09  Aligned_cols=215  Identities=16%  Similarity=0.102  Sum_probs=129.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      ++|++|||||+|+||.+++++|++     .|++|++++|.....      . ....++.++.+|++|.+++..+++    
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAR-----EGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0 011356789999999988766555    


Q ss_pred             ---cCCCeeEEEEeccCC------C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047           93 ---QLTDVTHIFYVTWTN------R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~------~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                         .+|.|+|+++.....      .   ......+++|+.++.++++++.+.  ..+..+++++||...|       .. 
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-  151 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW-------LY-  151 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc-------CC-
Confidence               468899998753211      0   134456789999999999988764  1123467766643222       10 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCcee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  236 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  236 (396)
                                  ..+......+.+.+++.+..  ...++.+++++|+.+..+......  ...+..  ...+  ..+...
T Consensus       152 ------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~--~~~~--~~~~~~  213 (250)
T PRK07774        152 ------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVA--DMVK--GIPLSR  213 (250)
T ss_pred             ------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHH--HHHh--cCCCCC
Confidence                        00101111222433333321  245799999999988773221111  111100  0111  112111


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCee
Q 016047          237 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  281 (396)
Q Consensus       237 ~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~  281 (396)
                               +   .+..+++..++.++....  ..|++||+.++..+
T Consensus       214 ---------~---~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        214 ---------M---GTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             ---------C---cCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence                     1   123445777777765432  35789999887654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.56  E-value=2.7e-13  Score=124.96  Aligned_cols=157  Identities=17%  Similarity=0.108  Sum_probs=105.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +++||||||+|+||++++++|++     +|++|++++|++...  .  ....++..+.+|++|++++.++++       .
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALA-----AGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHh-----CcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999998     899999999976431  0  012357889999999998877665       3


Q ss_pred             CCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.|+|+|+......  +    .....+++|+.|+.++++++...  ..+..+++++||...+.      +      .| 
T Consensus        79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~------~------~~-  145 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI------T------MP-  145 (277)
T ss_pred             CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC------C------CC-
Confidence            678999987543211  1    23556899999999999986442  11245677666432111      1      00 


Q ss_pred             cCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          166 TEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                             +  ...|+.     +.+......  ...|++++++||+.+.++
T Consensus       146 -------~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~  186 (277)
T PRK06180        146 -------G--IGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD  186 (277)
T ss_pred             -------C--cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence                   1  111543     333322221  246899999999999774

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.55  E-value=2.4e-13  Score=125.49  Aligned_cols=157  Identities=15%  Similarity=0.084  Sum_probs=103.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      +++++|||||+|+||+++++.|++     +|++|++++|++...         .....+++++.+|++|++++.+ +.  
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~   75 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAK-----KGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLV   75 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHH
Confidence            357899999999999999999999     899999999975421         0112468899999999988765 43  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                           .+|.|+|+++......      ......+++|+.++.++++++...  ..+..+++++||...      .+|.  
T Consensus        76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~------~~~~--  147 (280)
T PRK06914         76 LKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG------RVGF--  147 (280)
T ss_pred             HHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc------cCCC--
Confidence                 3577889877533211      134556789999998888886432  122456776664211      1221  


Q ss_pred             CCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                          +        +  ...|+.     +.++....  ....+++++++||+.+.++
T Consensus       148 ----~--------~--~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  189 (280)
T PRK06914        148 ----P--------G--LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTN  189 (280)
T ss_pred             ----C--------C--CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccc
Confidence                0        1  111442     33333322  1345899999999998884

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.54  E-value=1.6e-13  Score=125.06  Aligned_cols=158  Identities=9%  Similarity=-0.006  Sum_probs=103.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      |+++||||||+|+||.+++++|.+     +|++|++++|+....      .   ....++.++.+|++|.+++..++.  
T Consensus         1 m~k~ilItG~~~~IG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   75 (259)
T PRK12384          1 MNQVAVVIGGGQTLGAFLCHGLAE-----EGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGV   75 (259)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHH
Confidence            578999999999999999999999     899999999875321      0   011357899999999988776654  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCC-cceEEEeccceeecccccccccC
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APN-LRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~-~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                           .+|.|+|+++......      ++....+++|+.++.++++++.+.  ..+ -.+++++|+..      +.+|. 
T Consensus        76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~------~~~~~-  148 (259)
T PRK12384         76 DEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS------GKVGS-  148 (259)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc------cccCC-
Confidence                 3577999987543211      134567799999988888877653  112 23566555321      12221 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                           +        .  ...|+..|     ++..+..  ...|+++.++||+.+++.
T Consensus       149 -----~--------~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~  190 (259)
T PRK12384        149 -----K--------H--NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKS  190 (259)
T ss_pred             -----C--------C--CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccc
Confidence                 0        0  11144322     2222211  357899999999998873

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.54  E-value=3.6e-13  Score=122.37  Aligned_cols=157  Identities=11%  Similarity=0.021  Sum_probs=102.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +++|+||||+|+||++++++|++     +|++|+++ .|+....      .. ....++++.+|++|++++.++++    
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~-----~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLAN-----DGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            58999999999999999999999     89998775 4543211      10 12357789999999998877666    


Q ss_pred             ---------cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccccccc
Q 016047           93 ---------QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 ---------~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                               .+|.|+|+|+......  +    .....+++|+.++.++++++.+.-....+++++||...+       ..
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~-------~~  153 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR-------LG  153 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc-------CC
Confidence                     3677899887532211  1    225567899999999999887642223466666543222       11


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                           .         + ....|+.     +.+...+..  ...++++++++|+.+.++
T Consensus       154 -----~---------~-~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  196 (254)
T PRK12746        154 -----F---------T-GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTD  196 (254)
T ss_pred             -----C---------C-CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCc
Confidence                 0         0 0111442     333322221  246799999999999883

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.53  E-value=3e-13  Score=123.27  Aligned_cols=215  Identities=15%  Similarity=0.118  Sum_probs=129.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHhc
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      ..++|++|||||+|+||++++++|++     .|++|+++.|+.....        ....++.++.+|++|.+++.++++.
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   80 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAA-----HGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVAR   80 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            44678999999999999999999998     8999988877532110        0124678899999999988777654


Q ss_pred             -------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCC--CcceEEEeccceeecccccccccC
Q 016047           94 -------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAP--NLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        94 -------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~--~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                             +|.|+|+|+......      +.....+++|+.++.++++++.+...  .-.+++++++..       .+.+ 
T Consensus        81 ~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~-------~~~~-  152 (258)
T PRK09134         81 ASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQR-------VWNL-  152 (258)
T ss_pred             HHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchh-------hcCC-
Confidence                   577999987432211      13466789999999999998876521  123444333210       1110 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHH-----HHHHHhhc-CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                                   .|. ...|+..|     +.+.+..+ ..++.+..++|+.+.......    ...+   .....  ..
T Consensus       153 -------------~p~-~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~----~~~~---~~~~~--~~  209 (258)
T PRK09134        153 -------------NPD-FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS----PEDF---ARQHA--AT  209 (258)
T ss_pred             -------------CCC-chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC----hHHH---HHHHh--cC
Confidence                         011 11265433     33322211 123899999999887621110    1111   11011  11


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHH
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWK  284 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~  284 (396)
                      +   .+.         ..++.++|.++++++..+...|+.|++.++..++|.
T Consensus       210 ~---~~~---------~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        210 P---LGR---------GSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             C---CCC---------CcCHHHHHHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence            1   111         133455688888877766667889998887665554

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.53  E-value=8.7e-14  Score=118.32  Aligned_cols=260  Identities=15%  Similarity=0.141  Sum_probs=154.9

Q ss_pred             ccccccccccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEe-CCCCCCCCCCCCeeEEEecCCCh
Q 016047            7 GAIGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVA-RRPKPNWNADHLVEYVQCDVSDP   84 (396)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~   84 (396)
                      +.+++.+.|+.... .+...+||||||-|.+|..++..|...    -|-+ |+.-+ ++|+....  ..-.++..|+.|.
T Consensus        27 ~~v~~~A~FH~~s~-~~~~PrvLITG~LGQLG~~~A~LLR~~----yGs~~VILSDI~KPp~~V~--~~GPyIy~DILD~   99 (366)
T KOG2774|consen   27 LPVDPLARFHTISQ-TQKAPRVLITGSLGQLGRGLASLLRYM----YGSECVILSDIVKPPANVT--DVGPYIYLDILDQ   99 (366)
T ss_pred             ccCCcccccccccc-cCCCCeEEEecchHHHhHHHHHHHHHH----hCCccEehhhccCCchhhc--ccCCchhhhhhcc
Confidence            34556667887776 566679999999999999999999864    2444 55444 34443322  2345889999999


Q ss_pred             HHHHHHHhcCCCeeEEEEecc----CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCC
Q 016047           85 EETQAKLSQLTDVTHIFYVTW----TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        85 ~~~~~~~~~~~~V~h~a~~~~----~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                      ..+++.+-+.. |..++|.+.    ....+-.....+|+.|.+|+++.+++++  ++-|+        .|+.++||+..|
T Consensus       100 K~L~eIVVn~R-IdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k--L~iFV--------PSTIGAFGPtSP  168 (366)
T KOG2774|consen  100 KSLEEIVVNKR-IDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK--LKVFV--------PSTIGAFGPTSP  168 (366)
T ss_pred             ccHHHhhcccc-cceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC--eeEee--------cccccccCCCCC
Confidence            98888765433 344444322    2222444567899999999999999874  66555        233446775211


Q ss_pred             CCCCccCCCCCCCCCCcchhH----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHH-HHhhhcCCCce
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYA-AVCKHEGIPLR  235 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~i~~~~~~~~~  235 (396)
                       ..|...-+-..|  ...|+.    .+++.+++...+|+++-.+|...++...+.+........+.+- ++.++.-....
T Consensus       169 -RNPTPdltIQRP--RTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCyl  245 (366)
T KOG2774|consen  169 -RNPTPDLTIQRP--RTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYL  245 (366)
T ss_pred             -CCCCCCeeeecC--ceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCccccc
Confidence             111111111122  334664    5667777756789999999988888765433222222222222 23332211112


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHH--hcCCCCCCceeeecCCCeeeHHHHHHHHHHHh
Q 016047          236 FPGTKAAWECYSIASDADLIAEHQIWA--AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQF  294 (396)
Q Consensus       236 ~~g~~~~~~~~~~~~da~~la~~~i~~--~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~  294 (396)
                      -|...   ....+..|-.   ++++..  +.++.-+.++||+++ -..|-.|+++.+.+..
T Consensus       246 rpdtr---lpmmy~~dc~---~~~~~~~~a~~~~lkrr~ynvt~-~sftpee~~~~~~~~~  299 (366)
T KOG2774|consen  246 RPDTR---LPMMYDTDCM---ASVIQLLAADSQSLKRRTYNVTG-FSFTPEEIADAIRRVM  299 (366)
T ss_pred             CCCcc---CceeehHHHH---HHHHHHHhCCHHHhhhheeeece-eccCHHHHHHHHHhhC
Confidence            23332   2445555541   222222  334445678999974 7889999998887764

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.52  E-value=2e-13  Score=128.70  Aligned_cols=121  Identities=12%  Similarity=0.052  Sum_probs=89.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+++||||||+|+||.+++++|++     .|++|++++|+....      . ....++.++.+|++|.++++++++.   
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAK-----RGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            357999999999999999999998     899999999875321      1 1123678999999999988777654   


Q ss_pred             ----CCCeeEEEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceeec
Q 016047           94 ----LTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYL  149 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~  149 (396)
                          +|.|+|+|+.....    .   +.....+++|+.|+.++++++...    +....+++++||..++.
T Consensus        80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~  150 (322)
T PRK07453         80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP  150 (322)
T ss_pred             hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence                77899988743211    1   134667899999999998877653    11124788888766554

>PRK06128 oxidoreductase; Provisional

Probab=99.52  E-value=1.3e-12  Score=121.91  Aligned_cols=157  Identities=13%  Similarity=0.051  Sum_probs=105.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +|+||||||+|+||.+++++|++     .|++|++..|+....        . ....++.++.+|++|++++++++.   
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~-----~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAR-----EGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHH-----cCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            47999999999999999999999     899998877653211        0 012356789999999988776654   


Q ss_pred             ----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          .+|.|+|+|+......       ++....+++|+.|+.++++++...-.+-.+++++||...|       ..    
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~-------~~----  198 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSY-------QP----  198 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcccc-------CC----
Confidence                4678899887532111       1456788999999999999987642222467766643322       11    


Q ss_pred             CCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                       .+        .  ...|+.     +.+.....  ....|+++.+++|+.|.++
T Consensus       199 -~~--------~--~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~  241 (300)
T PRK06128        199 -SP--------T--LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTP  241 (300)
T ss_pred             -CC--------C--chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCC
Confidence             00        0  111543     22222221  1346899999999999984

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.51  E-value=7e-13  Score=122.01  Aligned_cols=156  Identities=15%  Similarity=0.122  Sum_probs=103.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .|++|||||+|+||.+++++|++     +|++|++++|+....      . ....+++++.+|++|++++.++++     
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAA-----AGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            36999999999999999999998     899999999865321      0 011357788999999998877665     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.|+|+|+......      ......+++|+.++.++++++...  .....+++++||...|       ..     
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~-------~~-----  152 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVAL-------RQ-----  152 (274)
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhc-------CC-----
Confidence              3577999987532211      133456799999999999887532  1123467766643222       11     


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                      .+        .  ...|+.     +.++..+..  ...|++++++||+.+..
T Consensus       153 ~~--------~--~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t  194 (274)
T PRK07775        153 RP--------H--MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLT  194 (274)
T ss_pred             CC--------C--cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccC
Confidence            00        0  111443     444433321  23589999999988755

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.3e-12  Score=118.17  Aligned_cols=164  Identities=13%  Similarity=0.078  Sum_probs=103.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      |++++|||||+|+||++++++|++     +|+.|+.+.++....       .. ...++.++.+|++|.+++.+++.   
T Consensus         1 ~~~~~lVtG~~~~iG~~~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06123          1 MRKVMIITGASRGIGAATALLAAE-----RGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVD   75 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            567899999999999999999998     898887776543211       00 12357789999999988877665   


Q ss_pred             ----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC-----CCcceEEEeccceeecccccccc
Q 016047           93 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA-----PNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~-----~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                          .+|.|+|+++......       ++....+++|+.++.++++++.+.-     .+-.+++++||...      .++
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~------~~~  149 (248)
T PRK06123         76 RELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAA------RLG  149 (248)
T ss_pred             HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhh------cCC
Confidence                4677999987543211       1345678999999999988876541     11134665553211      222


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhHHHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                      .      +  ..  ...........+.++..+..  ...+++++++||+.++|+
T Consensus       150 ~------~--~~--~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~  193 (248)
T PRK06123        150 S------P--GE--YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTE  193 (248)
T ss_pred             C------C--CC--ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCc
Confidence            1      0  00  00101111222433333221  345899999999999994

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.51  E-value=3.6e-13  Score=121.99  Aligned_cols=157  Identities=11%  Similarity=0.072  Sum_probs=105.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +++||||||+|+||++++++|++     +|++|++++|+....      .. ...++.++.+|++|.+++++++.     
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   77 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAE-----EGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA   77 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999875321      00 12468899999999988877665     


Q ss_pred             --cCCCeeEEEEeccCCC---c---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.|+|+++......   .   .....+++|+.++.++++++...  ..+..+++++||...|.+.           
T Consensus        78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~-----------  146 (250)
T TIGR03206        78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS-----------  146 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC-----------
Confidence              3677889876432111   1   23456899999999998887642  1124567777653322110           


Q ss_pred             CCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                       +        .  ...|+..|     +...+..  ...+++++++||+.++++
T Consensus       147 -~--------~--~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~  188 (250)
T TIGR03206       147 -S--------G--EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTA  188 (250)
T ss_pred             -C--------C--CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccch
Confidence             0        0  11154322     2222221  234799999999999984

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.50  E-value=1.2e-12  Score=119.42  Aligned_cols=155  Identities=13%  Similarity=0.029  Sum_probs=99.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHh------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....     . ....++.++.+|++|.+++.++++      
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAA-----EGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999     899999999974211     0 012357789999999987766555      


Q ss_pred             -cCCCeeEEEEeccC-C------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 -QLTDVTHIFYVTWT-N------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 -~~~~V~h~a~~~~~-~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                       .+|.++|+|+.... .      ..+....+++|+.++..+++++...  ..+..+++++||...|       +.     
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~-----  150 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR-------GI-----  150 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc-------CC-----
Confidence             45778888763211 1      1134556788998887666555432  1123467766643221       10     


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                                +...  |+.     +.+...+..  ...++++.+++|+.|+++
T Consensus       151 ----------~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  191 (260)
T PRK12823        151 ----------NRVP--YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP  191 (260)
T ss_pred             ----------CCCc--cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence                      0011  443     333332221  345899999999999994

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.50  E-value=6.7e-13  Score=119.28  Aligned_cols=156  Identities=16%  Similarity=0.079  Sum_probs=105.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      +++||||||+|+||.+++++|++     +|++|++++|++...     .....+++++.+|+.|.+++.++++       
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAA-----RGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHH-----CCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            57999999999999999999998     899999999975431     1112356788999999988877665       


Q ss_pred             cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      ++|.|+|+++.....    .  +...+.+++|+.++.++++++.+.  ..+..+++++||...|       +.     . 
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-----~-  148 (239)
T PRK12828         82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAAL-------KA-----G-  148 (239)
T ss_pred             CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhc-------cC-----C-
Confidence            467799987742211    1  123456789999999999887643  1236678877643322       21     0 


Q ss_pred             ccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                           +  +  ...|..     +.++....  ....++++.++||+.+++
T Consensus       149 -----~--~--~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~  189 (239)
T PRK12828        149 -----P--G--MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDT  189 (239)
T ss_pred             -----C--C--cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence                 0  1  111443     22333222  134689999999999998

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.50  E-value=4.2e-13  Score=123.14  Aligned_cols=156  Identities=19%  Similarity=0.168  Sum_probs=107.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-------CCCe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTDV   97 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~~V   97 (396)
                      +++|+||||+|+||++++++|.+     +|++|++++|++.... ...+++++++|++|+++++++++.       +|.|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLAR-----AGYRVFGTSRNPARAA-PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCChhhcc-ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence            46899999999999999999999     8999999999864432 224788999999999988887765       5779


Q ss_pred             eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                      +|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+       .     ..      
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~-----~~------  139 (270)
T PRK06179         78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGF-------L-----PA------  139 (270)
T ss_pred             EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCcccc-------C-----CC------
Confidence            99987533211      134667899999999998876432  1235677777643211       1     00      


Q ss_pred             CCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          170 PRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       170 p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                         |. ...|+.     +.+.....  .+..|+++++++|+.+.++
T Consensus       140 ---~~-~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~  181 (270)
T PRK06179        140 ---PY-MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTN  181 (270)
T ss_pred             ---CC-ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccc
Confidence               10 111442     32222211  1456899999999998874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.49  E-value=7.2e-13  Score=120.54  Aligned_cols=215  Identities=16%  Similarity=0.079  Sum_probs=129.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      .. ...++.++.+|++|.++++++++.   
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQ-----AGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      10 113477899999999988777754   


Q ss_pred             ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          .|.|+|+++......      +.....+.+|+.++.++++++.+.  .....+++++||...+             
T Consensus        84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-------------  150 (255)
T PRK07523         84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSA-------------  150 (255)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhc-------------
Confidence                577888877532211      123556789999999999988764  1124567766642111             


Q ss_pred             CCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047          162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  234 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  234 (396)
                       .+.    +  .  ...|+.     +.+.+.+..  ...|+++.++||+.+.++.-..... ...+.  ..+..  ..|+
T Consensus       151 -~~~----~--~--~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~-~~~~~--~~~~~--~~~~  216 (255)
T PRK07523        151 -LAR----P--G--IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA-DPEFS--AWLEK--RTPA  216 (255)
T ss_pred             -cCC----C--C--CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc-CHHHH--HHHHh--cCCC
Confidence             000    0  1  112443     333332221  3568999999999998832111100 01110  00111  1121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeee
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFK  282 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s  282 (396)
                                  .......++|.++++++....  ..|+++++.++...|
T Consensus       217 ------------~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        217 ------------GRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             ------------CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence                        112234556777777765422  247889988765444

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.49  E-value=8.5e-13  Score=119.42  Aligned_cols=115  Identities=20%  Similarity=0.139  Sum_probs=84.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      ++++|||||+|+||++++++|++     +|++|+++.++....       . ....++.++.+|++|++++.++++.   
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQ-----EGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999998     899998776543211       0 0123578899999999988777765   


Q ss_pred             ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                          +|.|+|+++......      ....+.+++|+.++.++++++...  .....+++++||
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  143 (247)
T PRK12935         81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS  143 (247)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence                578999987533211      245667899999999999988753  112346666654

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.49  E-value=7.5e-13  Score=120.06  Aligned_cols=158  Identities=14%  Similarity=0.039  Sum_probs=104.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .++++|||||+|+||++|+++|++     +|++|+++.|+....      .....++.++++|++|++++.++++     
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAR-----EGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHH-----CCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357999999999999999999998     899999999975321      1112357899999999998877665     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.|+|+++......      +.....+.+|+.++.++.+++...  ..+..+++++||...      .+|.     
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~------~~~~-----  147 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLA------LAGG-----  147 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhh------ccCC-----
Confidence              4678999987532211      134556899999997777665432  112456776664321      1111     


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                                + ....|+.     +.++..+..  ...+++++++||+.++++
T Consensus       148 ----------~-~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  189 (252)
T PRK06138        148 ----------R-GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTP  189 (252)
T ss_pred             ----------C-CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCc
Confidence                      0 0111442     333333221  245899999999999884

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.49  E-value=3.6e-13  Score=122.16  Aligned_cols=214  Identities=11%  Similarity=-0.012  Sum_probs=126.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +++||||||+|+||++++++|++     +|++|+++.|+.....        ....++.++.+|+++++++..+++    
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAK-----EGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence            47999999999999999999998     8999888776532110        011356688999999987766655    


Q ss_pred             ---cCCCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                         .+|.|+|+|+......    +  .....+++|+.++.++++++.+.-..-.+++++||...|       +.      
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~------  147 (252)
T PRK06077         81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI-------RP------  147 (252)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc-------CC------
Confidence               4688999987532211    1  124567999999999999887652222456666543222       11      


Q ss_pred             CccCCCCCCCCCCcchhH-----HHHHHHHhhc-CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceec
Q 016047          164 PFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  237 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  237 (396)
                             ..+  ...|+.     +.+...+..+ ..++.+.+++|+.+.+........... ..     .......  +.
T Consensus       148 -------~~~--~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~-~~-----~~~~~~~--~~  210 (252)
T PRK06077        148 -------AYG--LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG-MS-----EKEFAEK--FT  210 (252)
T ss_pred             -------CCC--chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc-cc-----HHHHHHh--cC
Confidence                   001  112553     3333333211 127899999999998732100000000 00     0000000  00


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCe
Q 016047          238 GTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDV  280 (396)
Q Consensus       238 g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~  280 (396)
                          ....+   .+..++|+.++.++..+...|++||+.++..
T Consensus       211 ----~~~~~---~~~~dva~~~~~~~~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        211 ----LMGKI---LDPEEVAEFVAAILKIESITGQVFVLDSGES  246 (252)
T ss_pred             ----cCCCC---CCHHHHHHHHHHHhCccccCCCeEEecCCee
Confidence                00122   3444558888887766666789999988643

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.49  E-value=1.8e-12  Score=106.57  Aligned_cols=205  Identities=17%  Similarity=0.142  Sum_probs=127.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  105 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~  105 (396)
                      |||.|+||||.+|+++++++++     +||+|++++|++.+.. ..+++.+++.|+.|++.+.+.+.+.|.|+..++...
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~-----RGHeVTAivRn~~K~~-~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALK-----RGHEVTAIVRNASKLA-ARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGA   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHh-----CCCeeEEEEeChHhcc-ccccceeecccccChhhhHhhhcCCceEEEeccCCC
Confidence            5899999999999999999999     9999999999986532 225788999999999999999999998888765332


Q ss_pred             CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh----H
Q 016047          106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT----L  181 (396)
Q Consensus       106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~----~  181 (396)
                         .+.+..   .....+.|++..+.++  +.+++.+++.    +|  -|-    ++...-.+.|..|.  -||.    +
T Consensus        75 ---~~~~~~---~~k~~~~li~~l~~ag--v~RllVVGGA----GS--L~i----d~g~rLvD~p~fP~--ey~~~A~~~  134 (211)
T COG2910          75 ---SDNDEL---HSKSIEALIEALKGAG--VPRLLVVGGA----GS--LEI----DEGTRLVDTPDFPA--EYKPEALAQ  134 (211)
T ss_pred             ---CChhHH---HHHHHHHHHHHHhhcC--CeeEEEEcCc----cc--eEE----cCCceeecCCCCch--hHHHHHHHH
Confidence               222222   2233566777777654  6666655542    12  111    01111233343332  2343    2


Q ss_pred             HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC-CceecCCccccceeeecccHHHHHHHHH
Q 016047          182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWECYSIASDADLIAEHQI  260 (396)
Q Consensus       182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~~~~~da~~la~~~i  260 (396)
                      .+.|...- ....++||.+-|+..+-|+++.. +    +       + ++. .+..-..+.   +.+...|.   |-+++
T Consensus       135 ae~L~~Lr-~~~~l~WTfvSPaa~f~PGerTg-~----y-------r-lggD~ll~n~~G~---SrIS~aDY---AiA~l  194 (211)
T COG2910         135 AEFLDSLR-AEKSLDWTFVSPAAFFEPGERTG-N----Y-------R-LGGDQLLVNAKGE---SRISYADY---AIAVL  194 (211)
T ss_pred             HHHHHHHh-hccCcceEEeCcHHhcCCccccC-c----e-------E-eccceEEEcCCCc---eeeeHHHH---HHHHH
Confidence            34444432 45569999999999999543311 1    1       0 122 223222233   34444444   66777


Q ss_pred             HHhcCCCCCCceeeec
Q 016047          261 WAAVDPYAKNEAFNCN  276 (396)
Q Consensus       261 ~~~~~~~~~g~~~ni~  276 (396)
                      .-...+....+.|-+.
T Consensus       195 De~E~~~h~rqRftv~  210 (211)
T COG2910         195 DELEKPQHIRQRFTVA  210 (211)
T ss_pred             HHHhcccccceeeeec
Confidence            7677777777777653

>PRK09186 flagellin modification protein A; Provisional

Probab=99.48  E-value=5.3e-13  Score=121.41  Aligned_cols=165  Identities=13%  Similarity=0.079  Sum_probs=103.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      +|+||||||+|+||.++++.|++     +|++|++++|++...         ......+.++.+|++|++++.++++.  
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~-----~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILE-----AGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSA   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHH
Confidence            58999999999999999999999     899999999875431         11123466789999999988777764  


Q ss_pred             -----CCCeeEEEEeccC-------CC--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047           94 -----LTDVTHIFYVTWT-------NR--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        94 -----~~~V~h~a~~~~~-------~~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                           +|.|+|+|+....       ..  +.....+++|+.++..+++++...  ..+..+++++||...+.      +.
T Consensus        79 ~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~  152 (256)
T PRK09186         79 EKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV------AP  152 (256)
T ss_pred             HHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc------cc
Confidence                 6778998753211       01  124556788888877666655443  11245777776532221      11


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHH-----HHH---HHhhcCCCeeEEEEcCCceee
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLED-----ILF---EEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~---~~~~~~~~~~~~ilRp~~v~G  207 (396)
                          .....++.+.....  .|+..|     +..   ... ...++++++++|+.+++
T Consensus       153 ----~~~~~~~~~~~~~~--~Y~~sK~a~~~l~~~la~e~-~~~~i~v~~i~Pg~~~~  203 (256)
T PRK09186        153 ----KFEIYEGTSMTSPV--EYAAIKAGIIHLTKYLAKYF-KDSNIRVNCVSPGGILD  203 (256)
T ss_pred             ----cchhccccccCCcc--hhHHHHHHHHHHHHHHHHHh-CcCCeEEEEEecccccC
Confidence                11112332221111  255322     222   222 35689999999998877

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.48  E-value=3e-12  Score=115.60  Aligned_cols=115  Identities=19%  Similarity=0.087  Sum_probs=84.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +++||||||||+||.+++++|++     +|++|+++.|++...       . ....++.++.+|+++++++.++++    
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAA-----QGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKA   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999     899998888875421       0 112467889999999998877665    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                         .+|.|+|+++......      ......+.+|+.++.++++++...  .....+++++|+
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss  142 (248)
T PRK05557         80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS  142 (248)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence               4678999987533211      134556789999999999988764  122456776664

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.48  E-value=2.6e-12  Score=116.22  Aligned_cols=158  Identities=18%  Similarity=0.097  Sum_probs=105.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------C-CCCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------W-NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ++++||||||+|+||.+++++|++     +|++|++++|.....          . ....+++++.+|+.|++++.+++.
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAA-----DGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999998     899999987743211          0 012367899999999988877664


Q ss_pred             -------cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHc-cc--CCCcceEEEeccceeecccccccc
Q 016047           93 -------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVI-PN--APNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~-~~--~~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                             .+|.|+|+++.....  .    .+....+++|+.++.++++++. ..  .....+++++||...+      ++
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------~~  153 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGV------RG  153 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhc------CC
Confidence                   467899998753311  1    1345678999999999999887 21  1124567776643322      11


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                      .              .+  ...|..     +.+......  ...+++++++||+.+.++
T Consensus       154 ~--------------~~--~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~  196 (249)
T PRK12827        154 N--------------RG--QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTP  196 (249)
T ss_pred             C--------------CC--CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCC
Confidence            0              01  111443     222222211  335899999999999994

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=1.2e-12  Score=118.61  Aligned_cols=115  Identities=17%  Similarity=0.105  Sum_probs=84.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ-----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   93 (396)
                      +++||||||+|+||.+++++|++     +|++|++++|++...      .....++.++.+|+.|++++..+++.     
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAA-----EGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            47999999999999999999998     899999999986421      00123577999999999988877654     


Q ss_pred             --CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           94 --LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        94 --~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                        +|.|+|+++......       +.....+++|+.++.++++.+...  ..+..+++++||
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  141 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVAS  141 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence              477899877532211       134567899999988887766643  123566777664

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.47  E-value=5.3e-13  Score=121.48  Aligned_cols=116  Identities=11%  Similarity=0.011  Sum_probs=84.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHh-cCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS-QLT   95 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~-~~~   95 (396)
                      |+++||||||||+||++++++|++     .|++|++++|++...       .....++.++.+|+.|++++..++. ++|
T Consensus         1 m~~~vlVtGasg~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id   75 (257)
T PRK09291          1 MSKTILITGAGSGFGREVALRLAR-----KGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVD   75 (257)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCC
Confidence            567999999999999999999998     899999999975321       0012357899999999999988876 788


Q ss_pred             CeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           96 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        96 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      .|+|+|+......      +.....+++|+.++.++.+++.+.  ..+..+++++||
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS  132 (257)
T PRK09291         76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSS  132 (257)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcC
Confidence            8999987532211      123456788999877666544322  112467777764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.46  E-value=1.4e-12  Score=118.09  Aligned_cols=212  Identities=11%  Similarity=0.017  Sum_probs=125.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      ++++|||||+|+||.+++++|++     .|++|+++ .|+....      . ....++.++.+|++|++++.++++.   
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~-----~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAE-----EGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDE   78 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            37999999999999999999999     89998764 5654211      0 0124578899999999988777764   


Q ss_pred             ----CCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCCC
Q 016047           94 ----LTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          +|.|+|+++......  +    .....+++|+.++.++++++.+..  .+..+|+++||...+       .     
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~-----  146 (250)
T PRK08063         79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI-------R-----  146 (250)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc-------c-----
Confidence                577899876432211  1    223457899999999999887642  224578877643211       0     


Q ss_pred             CCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047          162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  234 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  234 (396)
                        +      ..+..  .|+.     +.+++....  ...++++++++|+.+..+........ ..+  ......  ..+ 
T Consensus       147 --~------~~~~~--~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-~~~--~~~~~~--~~~-  210 (250)
T PRK08063        147 --Y------LENYT--TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-EEL--LEDARA--KTP-  210 (250)
T ss_pred             --C------CCCcc--HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-hHH--HHHHhc--CCC-
Confidence              0      00111  1443     444333221  24689999999999977322111100 001  000000  101 


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCe
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDV  280 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~  280 (396)
                       .          ....+..++|+.+++++..+.  ..|+.+++.++..
T Consensus       211 -~----------~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        211 -A----------GRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             -C----------CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence             0          112344556888877765433  3478888876644

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.46  E-value=6.6e-13  Score=120.98  Aligned_cols=157  Identities=15%  Similarity=0.019  Sum_probs=102.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      |+++||||||+|+||.+++++|++     +|++|++++|++...      .....++.++.+|++|++++.++++.    
T Consensus         1 ~~~~vlItGas~gIG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   75 (257)
T PRK07024          1 MPLKVFITGASSGIGQALAREYAR-----QGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA   75 (257)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh
Confidence            457999999999999999999998     899999999975321      11112688999999999988776654    


Q ss_pred             ---CCCeeEEEEeccCC---C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           94 ---LTDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         +|.++|+++.....   .    ++....+++|+.|+.++++++...  ..+..+++.+||...      .++.    
T Consensus        76 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~------~~~~----  145 (257)
T PRK07024         76 HGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAG------VRGL----  145 (257)
T ss_pred             CCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhh------cCCC----
Confidence               57788887753211   1    134567899999999877743321  112356666653221      1110    


Q ss_pred             CCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                                 +. ...|+.     +.+.....  .+..|++++++||+.|.+
T Consensus       146 -----------~~-~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t  186 (257)
T PRK07024        146 -----------PG-AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRT  186 (257)
T ss_pred             -----------CC-CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcC
Confidence                       10 112543     22222211  145689999999999987

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.46  E-value=5e-13  Score=121.74  Aligned_cols=158  Identities=12%  Similarity=0.043  Sum_probs=106.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|++++..++.    
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAAR-----AGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALE   78 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 012357899999999988776664    


Q ss_pred             ---cCCCeeEEEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.|+|+|+.....    .   ......+++|+.++..+++++.... ....+++++||...+       .     
T Consensus        79 ~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~-------~-----  146 (258)
T PRK07890         79 RFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLR-------H-----  146 (258)
T ss_pred             HcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhc-------c-----
Confidence               457899998643221    1   1446678999999999999887541 112467766642211       1     


Q ss_pred             CCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                        +.      .+...  |..     +.++..+..  ...++++.++||+.++++
T Consensus       147 --~~------~~~~~--Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~  190 (258)
T PRK07890        147 --SQ------PKYGA--YKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGD  190 (258)
T ss_pred             --CC------CCcch--hHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcH
Confidence              00      01111  442     333333221  345799999999999994

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.45  E-value=5.1e-12  Score=113.30  Aligned_cols=151  Identities=18%  Similarity=0.197  Sum_probs=102.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh------cCCCee
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS------QLTDVT   98 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~~~V~   98 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|++....    ..+++.+|++|++++.+++.      ++|.|+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi   73 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLAN-----LGHQVIGIARSAIDDF----PGELFACDLADIEQTAATLAQINEIHPVDAIV   73 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEeCCccccc----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEE
Confidence            47899999999999999999999     8999999999865422    23688999999988777665      467899


Q ss_pred             EEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           99 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        99 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      |+++......      .+....+++|+.++.++.+++...  ..+..+++++||...|       +.      +      
T Consensus        74 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~------~------  134 (234)
T PRK07577         74 NNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF-------GA------L------  134 (234)
T ss_pred             ECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc-------CC------C------
Confidence            9987533211      134556889999988887766442  1124577777643222       21      0      


Q ss_pred             CCCCCCcchhH-----HHHHHH---HhhcCCCeeEEEEcCCceeec
Q 016047          171 RLDAPNFYYTL-----EDILFE---EVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       171 ~~~~~~~~y~~-----e~~l~~---~~~~~~~~~~~ilRp~~v~G~  208 (396)
                        .  ...|..     +.+...   .+ ...|++++++||+.+..+
T Consensus       135 --~--~~~Y~~sK~a~~~~~~~~a~e~-~~~gi~v~~i~pg~~~t~  175 (234)
T PRK07577        135 --D--RTSYSAAKSALVGCTRTWALEL-AEYGITVNAVAPGPIETE  175 (234)
T ss_pred             --C--chHHHHHHHHHHHHHHHHHHHH-HhhCcEEEEEecCcccCc
Confidence              0  111443     222222   22 346899999999998873

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.45  E-value=6.1e-13  Score=122.57  Aligned_cols=155  Identities=17%  Similarity=0.156  Sum_probs=102.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhc--------C
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--------L   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~--------~   94 (396)
                      |+++||||||+|+||.+++++|.+     +|++|++++|++... .....+++++.+|++|.+++.++++.        +
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~-----~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQS-----DGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            568999999999999999999998     899999999976431 01123678899999999887766653        4


Q ss_pred             CCeeEEEEeccCCC------ccHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           95 TDVTHIFYVTWTNR------STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        95 ~~V~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      |.|+|+|+......      +.....+++|+.|    ++++++.+++.+  ..+++++||..         |..     +
T Consensus        78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~--~g~iv~isS~~---------~~~-----~  141 (277)
T PRK05993         78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG--QGRIVQCSSIL---------GLV-----P  141 (277)
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC--CCEEEEECChh---------hcC-----C
Confidence            66888876432211      1235578999999    666666666543  45677776422         210     0


Q ss_pred             ccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                      .      ..  ...|+.     +.+.....  ....|+++++++|+.|-.
T Consensus       142 ~------~~--~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T  183 (277)
T PRK05993        142 M------KY--RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIET  183 (277)
T ss_pred             C------Cc--cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccC
Confidence            0      01  112553     22222211  145789999999998865

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.2e-12  Score=116.77  Aligned_cols=111  Identities=21%  Similarity=0.140  Sum_probs=80.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHhc---CCCee
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVT   98 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~   98 (396)
                      .|+||||||+|+||++++++|++     + ++|++++|++...   ....++++++++|+.|++++.++++.   +|.|+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~-----~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   76 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAP-----T-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLV   76 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHh-----h-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            47999999999999999999998     7 8999999975431   00113678999999999999888874   77899


Q ss_pred             EEEEeccCCC------ccHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecc
Q 016047           99 HIFYVTWTNR------STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        99 h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                      |+++......      ......+++|+.+    ++++++++++.   ..+++++||
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~v~~ss  129 (227)
T PRK08219         77 HNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---HGHVVFINS  129 (227)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---CCeEEEEcc
Confidence            9987532211      1234567888888    45555555443   345666654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.45  E-value=2.5e-12  Score=116.64  Aligned_cols=155  Identities=14%  Similarity=0.056  Sum_probs=105.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-------CCCe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTDV   97 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~~V   97 (396)
                      +|++|||||+|+||++++++|++     +|++|++++|+....  ...++.++++|++|++++.++++.       +|.|
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~-----~G~~v~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVE-----AGAKVIGFDQAFLTQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecchhhh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47999999999999999999999     899999999976221  124678999999999988877654       6789


Q ss_pred             eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                      +|+++......      .+....+++|+.++.++++++...  .....+++++|+....              .+.    
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~--------------~~~----  142 (252)
T PRK08220         81 VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH--------------VPR----  142 (252)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc--------------cCC----
Confidence            99877532211      145567899999999999987643  1123456666532111              010    


Q ss_pred             CCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          170 PRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       170 p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                        .+  ...|+.     +.+......  ...++++.+++|+.++++
T Consensus       143 --~~--~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~  184 (252)
T PRK08220        143 --IG--MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTD  184 (252)
T ss_pred             --CC--CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcch
Confidence              01  111442     333322220  246899999999999994

>PRK06194 hypothetical protein; Provisional

Probab=99.44  E-value=2.4e-12  Score=119.19  Aligned_cols=100  Identities=19%  Similarity=0.001  Sum_probs=76.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      +++||||||+|+||++++++|++     +|++|++++|+....      .. ...++.++.+|++|.+++.++++.    
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAA-----LGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999     899999999874321      00 123577899999999988877764    


Q ss_pred             ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHH
Q 016047           94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAV  129 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~  129 (396)
                         +|.|+|+|+......      .+....+++|+.|+.++++++
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~  125 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF  125 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHH
Confidence               688999988643311      134556899999999976664

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.44  E-value=2.3e-12  Score=116.36  Aligned_cols=157  Identities=15%  Similarity=0.115  Sum_probs=105.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhc---CCCeeE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH   99 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~h   99 (396)
                      +++++||||+|+||.++++.|++     +|++|++++|++...  .....+..++.+|+++.+++.+++..   +|.|+|
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~   83 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQ-----RGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVN   83 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            47999999999999999999998     899999999975321  00112467889999999888877764   678999


Q ss_pred             EEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--C-CcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047          100 IFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--P-NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus       100 ~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      +++......      .+....+.+|+.++.++++++.+..  . ...+++++||...|      ++.      +      
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------~~~------~------  145 (245)
T PRK07060         84 CAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL------VGL------P------  145 (245)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc------CCC------C------
Confidence            887532211      1345567899999999999887641  1 12467766643222      110      0      


Q ss_pred             CCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          171 RLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       171 ~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                        .  ...|..     +.+++.+..  ...+++++.+||+.+.++
T Consensus       146 --~--~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~  186 (245)
T PRK07060        146 --D--HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTP  186 (245)
T ss_pred             --C--CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCc
Confidence              0  111442     443333321  245799999999999984

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2e-12  Score=120.90  Aligned_cols=119  Identities=14%  Similarity=0.055  Sum_probs=86.3

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHH
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ++..+|+||||||+|+||.+++++|++     +|++|++++|+....      .   ....++.++.+|+.|.+++++++
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~-----~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~   86 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAA-----KGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAA   86 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHH
Confidence            445668999999999999999999999     899999999974321      0   01246788999999999887765


Q ss_pred             h-------cCCCeeEEEEeccCCC----ccHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEeccce
Q 016047           92 S-------QLTDVTHIFYVTWTNR----STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTK  146 (396)
Q Consensus        92 ~-------~~~~V~h~a~~~~~~~----~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~  146 (396)
                      .       .+|.|+|+|+......    +.....+++|+.|    ++.+++.+++.+  ..+++++||..
T Consensus        87 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--~~~iV~vSS~~  154 (306)
T PRK06197         87 DALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--GSRVVTVSSGG  154 (306)
T ss_pred             HHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--CCEEEEECCHH
Confidence            5       3677999987533221    2345678999999    666666665532  35777777543

>PRK06196 oxidoreductase; Provisional

Probab=99.43  E-value=1.4e-12  Score=122.52  Aligned_cols=169  Identities=16%  Similarity=0.004  Sum_probs=105.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      .+++||||||+|+||.+++++|++     .|++|++++|++....   ....++.++.+|++|.+++++++.       .
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~-----~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQ-----AGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            358999999999999999999999     8999999999754210   011247899999999998877664       4


Q ss_pred             CCCeeEEEEeccCCC----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           94 LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                      +|.|+|+|+......    +.....+++|+.|+.++++++...  .....+++++||...+.      +...  ......
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~------~~~~--~~~~~~  171 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRR------SPIR--WDDPHF  171 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhcc------CCCC--ccccCc
Confidence            677889887532211    134667899999966665544332  11135677776543221      1100  000011


Q ss_pred             CCCCCCCCCcchhHHHHH--------HHHhhcCCCeeEEEEcCCceeec
Q 016047          168 DMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       168 ~~p~~~~~~~~y~~e~~l--------~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      ..+..+  ...|+..|..        .... ...|++++++||+.|.++
T Consensus       172 ~~~~~~--~~~Y~~SK~a~~~~~~~la~~~-~~~gi~v~~v~PG~v~t~  217 (315)
T PRK06196        172 TRGYDK--WLAYGQSKTANALFAVHLDKLG-KDQGVRAFSVHPGGILTP  217 (315)
T ss_pred             cCCCCh--HHHHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeCCcccCC
Confidence            111111  1236643332        2222 456899999999999884

>PRK08264 short chain dehydrogenase; Validated

Probab=99.42  E-value=3.3e-12  Score=114.88  Aligned_cols=157  Identities=18%  Similarity=0.063  Sum_probs=105.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc---CCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~h   99 (396)
                      ++++||||||+|+||++++++|++     +|+ +|++++|++........+++++.+|+.|++++.+++..   +|.|+|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~-----~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLA-----RGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            357999999999999999999998     898 89999998654221224788999999999998887764   677999


Q ss_pred             EEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047          100 IFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus       100 ~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      +++.....    .   ++....+++|+.++.++++++.+.  .....+++++||...|       ..     .       
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-------~~-----~-------  140 (238)
T PRK08264         80 NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW-------VN-----F-------  140 (238)
T ss_pred             CCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc-------cC-----C-------
Confidence            88752211    1   134566889999999999987643  1124567766543221       10     0       


Q ss_pred             CCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          171 RLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       171 ~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                        + ....|+.     +.+.....  ....+++++++||+.+.+
T Consensus       141 --~-~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t  181 (238)
T PRK08264        141 --P-NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDT  181 (238)
T ss_pred             --C-CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccc
Confidence              0 0112443     33332221  134589999999998876

>PRK06182 short chain dehydrogenase; Validated

Probab=99.42  E-value=1.2e-12  Score=120.34  Aligned_cols=154  Identities=21%  Similarity=0.160  Sum_probs=102.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-------QLTD   96 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~   96 (396)
                      +++|+||||+|+||.+++++|++     +|++|++++|+..... ....+++++.+|++|++++.++++       ++|.
T Consensus         3 ~k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAA-----QGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47999999999999999999998     8999999999764210 011357899999999998877776       5788


Q ss_pred             eeEEEEeccCCC------ccHHHHHHhHHHHH----HHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           97 VTHIFYVTWTNR------STEAENCKINGSMF----RNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        97 V~h~a~~~~~~~------~~~~~~~~~nv~gt----~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      |+|+|+......      ++....+++|+.++    +.++..+++.+  ..+++++||..         +..   ..   
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--~g~iv~isS~~---------~~~---~~---  140 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR--SGRIINISSMG---------GKI---YT---  140 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC--CCEEEEEcchh---------hcC---CC---
Confidence            999887533211      13566789999985    44445555432  45677666421         100   00   


Q ss_pred             CCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeec
Q 016047          167 EDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       167 E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                            +. ...|+..|.        +.... ...|++++++||+.+..+
T Consensus       141 ------~~-~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t~  182 (273)
T PRK06182        141 ------PL-GAWYHATKFALEGFSDALRLEV-APFGIDVVVIEPGGIKTE  182 (273)
T ss_pred             ------CC-ccHhHHHHHHHHHHHHHHHHHh-cccCCEEEEEecCCcccc
Confidence                  10 111443222        22222 457899999999999873

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.42  E-value=4.2e-12  Score=116.87  Aligned_cols=156  Identities=15%  Similarity=0.003  Sum_probs=103.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      ++|++|||||+|+||++++++|.+     +|++|++++|+....      .. ...++.++.+|++|++++.+++..   
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~-----~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFAR-----RGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR   79 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999     899999999875321      00 113577899999999988776654   


Q ss_pred             ----CCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCC
Q 016047           94 ----LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          +|.|+|+|+.....  .    +.....+++|+.|+.++++++...   ...-.+++++||...+       .+   
T Consensus        80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~-------~~---  149 (275)
T PRK05876         80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL-------VP---  149 (275)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc-------cC---
Confidence                57789988753221  1    134556799999999999887532   1113467766543222       10   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                        .         + ....|+..|.        +...+ ...|+++++++|+.+.+
T Consensus       150 --~---------~-~~~~Y~asK~a~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t  191 (275)
T PRK05876        150 --N---------A-GLGAYGVAKYGVVGLAETLAREV-TADGIGVSVLCPMVVET  191 (275)
T ss_pred             --C---------C-CCchHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEEeCcccc
Confidence              0         1 0112553322        22222 34689999999999877

>PLN02253 xanthoxin dehydrogenase

Probab=99.42  E-value=8.8e-12  Score=115.03  Aligned_cols=158  Identities=15%  Similarity=0.069  Sum_probs=104.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      ++|++|||||+|+||.+++++|++     .|++|++++|+....      .....++.++++|++|++++.+++.     
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHK-----HGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            358999999999999999999998     899999999864321      1112367899999999998877776     


Q ss_pred             --cCCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCC
Q 016047           93 --QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                        .+|.|+|+|+......        ++....+++|+.|+.++++++.+..  .+-.++++++|..      ..++.   
T Consensus        92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~------~~~~~---  162 (280)
T PLN02253         92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVA------SAIGG---  162 (280)
T ss_pred             hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChh------hcccC---
Confidence              4788999987532210        1346678999999999998876531  1123455544311      11221   


Q ss_pred             CCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                         +         . ...|+.     +.+...+..  ...++++..++|+.+..+
T Consensus       163 ---~---------~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~  204 (280)
T PLN02253        163 ---L---------G-PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA  204 (280)
T ss_pred             ---C---------C-CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence               0         0 011443     333333221  245799999999998774

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1e-11  Score=115.23  Aligned_cols=157  Identities=14%  Similarity=0.112  Sum_probs=104.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+|+||.+++++|++     .|++|++++|+....       . ....++.++.+|++|.+.+.++++    
T Consensus        46 ~k~iLItGasggIG~~la~~l~~-----~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAK-----EGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999     899999999875321       0 012357789999999988777664    


Q ss_pred             ---cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                         .+|.|+|+|+......       +.....+++|+.++.++++++.+.-.+-.+++++||...|..            
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~------------  188 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG------------  188 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC------------
Confidence               3678999987532211       133567899999999999988764111246676665433211            


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                      .+.          ...|+.     +.+...+..  ...|+++..++|+.+..+
T Consensus       189 ~~~----------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~  231 (290)
T PRK06701        189 NET----------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTP  231 (290)
T ss_pred             CCC----------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCc
Confidence            000          011442     222222221  245899999999999883

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=3e-12  Score=115.23  Aligned_cols=115  Identities=20%  Similarity=0.105  Sum_probs=85.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      ++++|||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|+++++++.++++     
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAK-----EGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999998     899999999975321      0 012367889999999998877776     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                        .+|.|+|+++......      .+..+.+++|+.++.++++++...  .....+++++|+
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss  143 (239)
T PRK07666         82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISS  143 (239)
T ss_pred             cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcc
Confidence              5788999987543211      123566899999999998887643  122456666654

>PRK08324 short chain dehydrogenase; Validated

Probab=99.41  E-value=6.8e-12  Score=129.48  Aligned_cols=220  Identities=15%  Similarity=0.099  Sum_probs=130.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .+++||||||+|+||.+++++|.+     .|++|++++|++...      .....++.++.+|++|++++.++++     
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~-----~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAA-----EGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            458999999999999999999998     899999999976421      1111367899999999988877665     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEeccceeecccccccccCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                        ++|.|+|+++......      ......+++|+.|+.++++++.+.  .... .+++++||...+      ++     
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~------~~-----  564 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV------NP-----  564 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc------CC-----
Confidence              4688999987533211      134567899999999998877643  1112 456666542211      11     


Q ss_pred             CCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCcee-ecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIF-GFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                       .         + ....|+.     +.++..+..  ...|+++.+++|+.|| +.....  ...... .    ....+.+
T Consensus       565 -~---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~--~~~~~~-~----~~~~g~~  626 (681)
T PRK08324        565 -G---------P-NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT--GEWIEA-R----AAAYGLS  626 (681)
T ss_pred             -C---------C-CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc--chhhhh-h----hhhccCC
Confidence             0         0 0112553     333333221  3457999999999998 632111  100000 0    0001111


Q ss_pred             c----eecCCccccceeeecccHHHHHHHHHHHhc--CCCCCCceeeecCCCe
Q 016047          234 L----RFPGTKAAWECYSIASDADLIAEHQIWAAV--DPYAKNEAFNCNNGDV  280 (396)
Q Consensus       234 ~----~~~g~~~~~~~~~~~~da~~la~~~i~~~~--~~~~~g~~~ni~~~~~  280 (396)
                      .    .+.+.+.....+.+   +.++|.++++++.  .....|++|++.++..
T Consensus       627 ~~~~~~~~~~~~~l~~~v~---~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        627 EEELEEFYRARNLLKREVT---PEDVAEAVVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             hHHHHHHHHhcCCcCCccC---HHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence            0    01122222223333   4455788777763  3344578999987754

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.41  E-value=1.3e-11  Score=111.44  Aligned_cols=158  Identities=13%  Similarity=0.114  Sum_probs=103.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      |.++||||||+|+||.+++++|.+     +|++|++++|++...       . ....++.++.+|+.|.+++.++++.  
T Consensus         1 ~~k~vlItG~s~~iG~~la~~l~~-----~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (245)
T PRK12824          1 MKKIALVTGAKRGIGSAIARELLN-----DGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIE   75 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            457999999999999999999998     799999999874211       0 0123578999999999888776654  


Q ss_pred             -----CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           94 -----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                           +|.|+|+++.....      .+.....+++|+.++.++++++.+.  .....+++++||...+       +.   
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~-------~~---  145 (245)
T PRK12824         76 EEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGL-------KG---  145 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhc-------cC---
Confidence                 57788887643211      1134567899999998886655332  1124577777643222       10   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                        .+        ..+  .|...|     +.+...  ....++++++++|+.+.++
T Consensus       146 --~~--------~~~--~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~  188 (245)
T PRK12824        146 --QF--------GQT--NYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATP  188 (245)
T ss_pred             --CC--------CCh--HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCc
Confidence              00        001  154433     222211  1355799999999999873

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.40  E-value=1.5e-11  Score=111.15  Aligned_cols=162  Identities=14%  Similarity=0.122  Sum_probs=99.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhcC---
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQL---   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~~---   94 (396)
                      ++||||||+|+||.+++++|++     +|++|+++. |++...      . ....++.++++|+.|++++.++++.+   
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~   76 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQ-----EGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQH   76 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            5899999999999999999998     899998754 443211      0 01135778999999999888777653   


Q ss_pred             ----CCeeEEEEeccCCCc-------cHHHHHHhHHHHHHHHHHHHccc-----CCCcceEEEeccceeecccccccccC
Q 016047           95 ----TDVTHIFYVTWTNRS-------TEAENCKINGSMFRNVLRAVIPN-----APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        95 ----~~V~h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                          |.|+|+++.......       +....+++|+.++.++++++...     ..+-.+++++||...+      ++. 
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~------~~~-  149 (247)
T PRK09730         77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR------LGA-  149 (247)
T ss_pred             CCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc------cCC-
Confidence                568888764322111       23467899999998777765443     1112456766643211      111 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                           |  ..  ..+........+.++....  ....+++++++||+.++++
T Consensus       150 -----~--~~--~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~  192 (247)
T PRK09730        150 -----P--GE--YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTE  192 (247)
T ss_pred             -----C--Cc--ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCc
Confidence                 0  00  0010111112233332221  0346899999999999995

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.40  E-value=1.4e-11  Score=111.31  Aligned_cols=117  Identities=15%  Similarity=0.106  Sum_probs=85.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .|+++||||||||+||.+++++|++     .|++|+++ +|++...      . ....++.++.+|++|++++.+++.  
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~-----~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAK-----EGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQI   77 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            3457999999999999999999998     89999988 8865321      0 012357899999999998877665  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                           .+|.|+|+++......      +.....+.+|+.++.++++++...  ..+..+++++||
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS  142 (247)
T PRK05565         78 VEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISS  142 (247)
T ss_pred             HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence                 5788999987542111      134567899999988888877653  112456776664

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.40  E-value=3.8e-12  Score=114.73  Aligned_cols=155  Identities=17%  Similarity=0.084  Sum_probs=102.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-CCCCCeeEEEecCCChHHHHHHHhcC----CCee
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQL----TDVT   98 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~~~~~~~~~----~~V~   98 (396)
                      ++||||||+|+||.+++++|++     +|++|++++|++...  . ....++.++.+|++|.++++++++.+    |.++
T Consensus         2 ~~vlItGas~giG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i   76 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAK-----QGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWI   76 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHh-----CCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence            6899999999999999999998     899999999975321  0 01235789999999999998888764    4466


Q ss_pred             EEEEeccC-CC---c--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC
Q 016047           99 HIFYVTWT-NR---S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL  172 (396)
Q Consensus        99 h~a~~~~~-~~---~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~  172 (396)
                      |.++.... ..   +  .....+++|+.|+.++++++...-.+-.+++.+||..      +.++      .         
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~------~~~~------~---------  135 (240)
T PRK06101         77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIA------SELA------L---------  135 (240)
T ss_pred             EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechh------hccC------C---------
Confidence            66653211 11   1  2356789999999999998876411123455554311      0111      0         


Q ss_pred             CCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          173 DAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       173 ~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                      +. ...|+.     +.+...+.  ....|++++++||+.|++
T Consensus       136 ~~-~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t  176 (240)
T PRK06101        136 PR-AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVAT  176 (240)
T ss_pred             CC-CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCC
Confidence            00 112443     22222111  145689999999999988

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.40  E-value=2e-12  Score=116.20  Aligned_cols=116  Identities=22%  Similarity=0.082  Sum_probs=85.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      ++++||||||+|+||++++++|++     .|++|++++|++...      .....+++++.+|+.|.+++.++++     
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLA-----EGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999998     799999999976321      1011467889999999998877665     


Q ss_pred             --cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecc
Q 016047           93 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  144 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  144 (396)
                        .+|.|+|+++.....      .++....+++|+.++.++++++.+.. ....+++++|+
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss  140 (237)
T PRK07326         80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISS  140 (237)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECC
Confidence              578899987643221      11345678999999999988876531 12456776654

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.39  E-value=1.9e-11  Score=109.77  Aligned_cols=112  Identities=21%  Similarity=0.132  Sum_probs=83.1

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHHhc------
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQ------   93 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~~------   93 (396)
                      ||||||+|+||.+++++|++     +|++|++++|+....       .. ...++.++.+|++|+++++++++.      
T Consensus         1 vlItG~~g~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAK-----EGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELG   75 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999999     899999999875221       00 112477899999999988777654      


Q ss_pred             -CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047           94 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  144 (396)
Q Consensus        94 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  144 (396)
                       +|.|+|+++......      ......+++|+.++.++++++.+..  ....+++++||
T Consensus        76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS  135 (239)
T TIGR01830        76 PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISS  135 (239)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence             478999987532211      1346678999999999999887641  22457777664

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK05717 oxidoreductase; Validated

Probab=99.39  E-value=1.8e-12  Score=117.94  Aligned_cols=162  Identities=14%  Similarity=0.079  Sum_probs=105.9

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      ++..+|+||||||+|+||++++++|++     .|++|++++|+....    .....++.++.+|+++++++.+++..   
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIA-----EGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLG   80 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            344568999999999999999999998     799999998864321    00123578899999999877554433   


Q ss_pred             ----CCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCC
Q 016047           94 ----LTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          +|.|+|+|+......        .+....+++|+.++.++++++.+. ..+..+++++||...+      ++.   
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~------~~~---  151 (255)
T PRK05717         81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR------QSE---  151 (255)
T ss_pred             HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc------CCC---
Confidence                578999987542211        134577899999999999998753 1112456666542211      110   


Q ss_pred             CCCCccCCCCCCCCCCcchhH-----HHHHHHHhhc-CCCeeEEEEcCCceeecC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGFS  209 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~-~~~~~~~ilRp~~v~G~~  209 (396)
                         +         . ...|+.     +.+...+..+ ..++++..++|+.+.++.
T Consensus       152 ---~---------~-~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~  193 (255)
T PRK05717        152 ---P---------D-TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD  193 (255)
T ss_pred             ---C---------C-CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence               0         0 011543     3333333211 235899999999999843

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.39  E-value=3.3e-12  Score=115.65  Aligned_cols=158  Identities=15%  Similarity=0.037  Sum_probs=103.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      ++++||||||+|+||++++++|++     +|++|++++|+.....    ....++.++++|++|.+++..++.       
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLA-----EGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            357999999999999999999999     8999999998743210    001357789999999876654433       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      .+|.|+|+++......      +.....+++|+.++.++++++.+.-....++++++|      ..+.+|.         
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S------~~~~~~~---------  144 (249)
T PRK06500         80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGS------INAHIGM---------  144 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEec------hHhccCC---------
Confidence            4678999987533211      134567899999999999999753111233443332      1112221         


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          167 EDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       167 E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                            + ....|+.     +.++..+..  ...++++.++||+.++++
T Consensus       145 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~  186 (249)
T PRK06500        145 ------P-NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP  186 (249)
T ss_pred             ------C-CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence                  0 0112553     333332221  345899999999999984

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.39  E-value=7.4e-12  Score=113.33  Aligned_cols=158  Identities=16%  Similarity=0.056  Sum_probs=103.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      |++++|||||+|+||.+++++|++     +|++|++++|++...         .....+++++.+|++|++++.++++  
T Consensus         1 ~~k~vlItGas~giG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   75 (248)
T PRK08251          1 TRQKILITGASSGLGAGMAREFAA-----KGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF   75 (248)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999998     789999999976321         0012367889999999987766554  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                           .+|.|+|+|+......      ......+++|+.++.++++++...  ..+..+++++||...      .+|.  
T Consensus        76 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------~~~~--  147 (248)
T PRK08251         76 RDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSA------VRGL--  147 (248)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccc------ccCC--
Confidence                 4677888876432211      123456899999999888877532  123456776664221      1111  


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHHH-----HHHHhh--cCCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                                   +.....|+..|.     ......  ...++++++++|+.+.+
T Consensus       148 -------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t  189 (248)
T PRK08251        148 -------------PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRS  189 (248)
T ss_pred             -------------CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcc
Confidence                         001112553322     222211  34579999999998877

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.39  E-value=3.8e-12  Score=116.12  Aligned_cols=114  Identities=17%  Similarity=0.064  Sum_probs=84.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhc-------
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ-------   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~-------   93 (396)
                      |++|||||||+||.+++++|++     +|++|++++|++...     .....+++++.+|++|.+++.+++..       
T Consensus         2 k~vlItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   76 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAA-----EGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGG   76 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999     899999999976431     01124688999999999888776653       


Q ss_pred             -CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           94 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        94 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                       +|.|+|+|+......      ++....+++|+.++.++++++...  .....+++++||
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  136 (260)
T PRK08267         77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS  136 (260)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence             477999887533211      134667899999999999887543  112355666654

>PRK12743 oxidoreductase; Provisional

Probab=99.39  E-value=2.7e-11  Score=110.25  Aligned_cols=158  Identities=12%  Similarity=0.007  Sum_probs=103.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      |+++||||||+|+||.+++++|++     .|++|+++.|++...       . ....+++++.+|++|++++.+++.   
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQ-----QGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLI   75 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            568999999999999999999999     899998887654321       0 012367899999999988766554   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                          .+|.|+|+++......      ++....+++|+.++.++++++....   .+-.+++++||..         +   
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~---------~---  143 (256)
T PRK12743         76 QRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH---------E---  143 (256)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc---------c---
Confidence                3677888876432111      1345678999999999999877541   1124666665321         1   


Q ss_pred             CCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                        ..+      ..+...  |+.     +.+++...  ....+++++.++|+.+.++
T Consensus       144 --~~~------~~~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~  189 (256)
T PRK12743        144 --HTP------LPGASA--YTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATP  189 (256)
T ss_pred             --cCC------CCCcch--hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence              011      111112  443     33332222  1356799999999999984

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.38  E-value=6.6e-12  Score=114.53  Aligned_cols=157  Identities=17%  Similarity=0.102  Sum_probs=102.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~   96 (396)
                      .+|+||||||+|.||++++++|.+     +|++|++++|+.....  ..++.++++|++|++++.++++       .+|.
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~r~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLE-----AGARVVTTARSRPDDL--PEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHH-----CCCEEEEEeCChhhhc--CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            358999999999999999999998     8999999999764432  2467899999999987765443       4678


Q ss_pred             eeEEEEeccCC--------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           97 VTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        97 V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      |+|+|+.....        .++....+++|+.++.++++++...  .....+++++||...+       .       +..
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-------~-------~~~  146 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR-------L-------PLP  146 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc-------C-------CCC
Confidence            99988743211        1145667899999998776665432  1123456666542211       1       100


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          167 EDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       167 E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                      +       ....|+.     +.+.+....  ...|+++.+++|+.|..+
T Consensus       147 ~-------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~  188 (260)
T PRK06523        147 E-------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETE  188 (260)
T ss_pred             C-------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCc
Confidence            0       1112543     323222221  345799999999999883

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.38  E-value=2.4e-11  Score=109.66  Aligned_cols=116  Identities=16%  Similarity=0.036  Sum_probs=84.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      ++++||||||+|+||++++++|.+     +|++|+++.|+....       . ....++.++.+|++|++++.++++   
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAA-----DGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899988887754211       0 012467899999999998877776   


Q ss_pred             ----cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047           93 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                          .+|.|+|+++.....      .......+++|+.++.++++++.+....-.+++++|+
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss  140 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST  140 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence                467899998753211      1134556889999999999888754222235666653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.37  E-value=1.3e-11  Score=111.75  Aligned_cols=156  Identities=15%  Similarity=0.122  Sum_probs=101.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC--CCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN--ADHLVEYVQCDVSDPEETQAKLS-------QL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (396)
                      |+|+||||+|+||.+++++|++     +|++|++++|++...  ..  ...++.++.+|+.|.+++.++++       ++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQ-----QGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999998     899999999976421  00  12367889999999988876664       57


Q ss_pred             CCeeEEEEeccCC---C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           95 TDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        95 ~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      |.|+|+++.....   .    ++....+++|+.|+.++++++.+.  ..+..+++++||...+              .+.
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~--------------~~~  141 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS--------------WPY  141 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC--------------CCC
Confidence            8899988743211   1    134567899999976666655432  1124567776642111              000


Q ss_pred             cCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          166 TEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                            ..  ...|+.     +.+.....  ....++.+.+++|+.+.|.
T Consensus       142 ------~~--~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~  183 (248)
T PRK10538        142 ------AG--GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT  183 (248)
T ss_pred             ------CC--CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence                  01  112443     33322221  1346799999999999873

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.37  E-value=6.6e-12  Score=113.35  Aligned_cols=155  Identities=15%  Similarity=0.033  Sum_probs=102.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      |+|+||||+|+||.+++++|++     +|++|++++|++...        .....+++++++|++|++++.++++.    
T Consensus         2 ~~vlItGas~giG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAA-----AGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPAL   76 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHh-----cCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhc
Confidence            6899999999999999999998     899999999976421        00124688999999999888776654    


Q ss_pred             CCCeeEEEEeccCCC---c---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTNR---S---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~---~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.|+|+++......   .   +....+++|+.++.++++++...  ..+..+++++||...      .++      .  
T Consensus        77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------~~~------~--  142 (243)
T PRK07102         77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAG------DRG------R--  142 (243)
T ss_pred             CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccc------cCC------C--
Confidence            467888876432211   1   23456899999999999887653  112456666653210      111      0  


Q ss_pred             cCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          166 TEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                             + ....|+.     +.+.....  ....|+++.+++|+.+.+
T Consensus       143 -------~-~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t  183 (243)
T PRK07102        143 -------A-SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRT  183 (243)
T ss_pred             -------C-CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccC
Confidence                   0 0111443     22222221  146689999999999988

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.37  E-value=1e-11  Score=112.08  Aligned_cols=115  Identities=16%  Similarity=0.078  Sum_probs=83.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      ++++|||||+|+||.+++++|++     +|+.|++.+|+....  .  ....+++++.+|+++.++++++++       .
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHA-----QGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG   80 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999998     799988888765321  0  011367889999999988776654       4


Q ss_pred             CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           94 LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        94 ~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      +|.|+|+++.....      .++....+++|+.++.++++++.+.  ..+..+++++||
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  139 (245)
T PRK12936         81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITS  139 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence            67899998753211      1144667899999999988877532  112456777664

>PRK06398 aldose dehydrogenase; Validated

Probab=99.37  E-value=1.7e-11  Score=111.81  Aligned_cols=112  Identities=13%  Similarity=0.108  Sum_probs=84.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~   96 (396)
                      ++|++|||||+|.||.+++++|.+     .|++|++++|+....    .+++++++|++|++++.++++       .+|.
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~-----~G~~Vi~~~r~~~~~----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKE-----EGSNVINFDIKEPSY----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCcccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            358999999999999999999999     899999999975432    368899999999988777665       4677


Q ss_pred             eeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           97 VTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        97 V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      ++|+|+.....  .    ++....+++|+.|+.++++++.+.  ..+..+++++||
T Consensus        76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  131 (258)
T PRK06398         76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIAS  131 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCc
Confidence            88887643211  1    134556899999999998877653  112456777664

>PRK08643 acetoin reductase; Validated

Probab=99.37  E-value=1e-11  Score=112.95  Aligned_cols=157  Identities=18%  Similarity=0.091  Sum_probs=101.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      |+|++|||||+|+||.+++++|++     +|++|++++|+....      .. ...++.++++|+++++++.++++    
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVE-----DGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVD   75 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            568999999999999999999998     899999999975321      00 12357789999999988776665    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.|+|+++......      +.....+++|+.++.++++++.+.   ...-.+++++||...      .++.   
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------~~~~---  146 (256)
T PRK08643         76 TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG------VVGN---  146 (256)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc------ccCC---
Confidence               4677899876432111      123567889999988777776543   111235666553221      1110   


Q ss_pred             CCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                                  +. ...|+.     +.+...+.  ....|++++.++|+.+..
T Consensus       147 ------------~~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t  187 (256)
T PRK08643        147 ------------PE-LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKT  187 (256)
T ss_pred             ------------CC-CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcC
Confidence                        00 111443     22222221  135689999999998877

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.36  E-value=5.7e-12  Score=114.88  Aligned_cols=161  Identities=15%  Similarity=0.110  Sum_probs=105.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      ++++||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++    
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGE-----AGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999998     899999999875321      0 012357789999999988866554    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.|+|+++......      +.....+++|+.++.++++++.+.   ..+..+++++||...+      ++.   
T Consensus        86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~------~~~---  156 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL------GGN---  156 (259)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc------cCC---
Confidence               3678999987532211      133556789999999999988653   1234577776643222      111   


Q ss_pred             CCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                        .+.   .  .+  ...|..     +.++..+..  ...++++.+++|+.+-.
T Consensus       157 --~~~---~--~~--~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t  201 (259)
T PRK08213        157 --PPE---V--MD--TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPT  201 (259)
T ss_pred             --Ccc---c--cC--cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCC
Confidence              000   0  01  112553     333333221  34579999999988866

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.36  E-value=6.7e-12  Score=113.14  Aligned_cols=156  Identities=15%  Similarity=0.107  Sum_probs=103.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-----CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-----~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      +|++|||||+|+||..++++|++     +|++|++++|++...  .     ....++.++.+|++|++++..+++.    
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAK-----AGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ   80 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999     899999999975321  0     0124678899999999987776653    


Q ss_pred             ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                         +|.|+|+++......      ++....+++|+.++.++++++...  ..+..+++++||...+       +..    
T Consensus        81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~~~----  149 (241)
T PRK07454         81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAAR-------NAF----  149 (241)
T ss_pred             cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC-------cCC----
Confidence               678999877432211      134566889999988888776443  1124567766643222       110    


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                       +        .  ...|+.     +.+.....  ....+++++++||+.+-.
T Consensus       150 -~--------~--~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t  190 (241)
T PRK07454        150 -P--------Q--WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNT  190 (241)
T ss_pred             -C--------C--ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccC
Confidence             0        0  111443     22222211  134589999999998876

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.36  E-value=4e-11  Score=108.53  Aligned_cols=115  Identities=18%  Similarity=0.123  Sum_probs=84.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +++||||||+|.||++++++|++     +|++|++++|++...      . ....++.++.+|+.|++++.+++.     
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAE-----AGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999998     899999999875421      0 012367899999999998877664     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  144 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  144 (396)
                        .+|.|+|+++......      ......+.+|+.++.++++++.+..  .+..+++++||
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  143 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS  143 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence              4677999877532211      1335567899999999998876541  12346777664

>PRK07985 oxidoreductase; Provisional

Probab=99.36  E-value=1.6e-11  Score=114.10  Aligned_cols=157  Identities=12%  Similarity=0.047  Sum_probs=102.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|+++.|+....        . ....++.++.+|++|++++.+++.   
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~-----~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAR-----EGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            47999999999999999999999     899999887653211        0 012356789999999987766554   


Q ss_pred             ----cCCCeeEEEEeccCC-------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ----QLTDVTHIFYVTWTN-------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~-------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          .+|.++|+|+.....       .++....+++|+.|+.++++++...-..-.+++++||...|       ..    
T Consensus       124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~-------~~----  192 (294)
T PRK07985        124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAY-------QP----  192 (294)
T ss_pred             HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhc-------cC----
Confidence                357788877642111       11456678999999999999887642122467766643322       11    


Q ss_pred             CCCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                       .         +. ...|+..|     +......  ...|+++.+++|+.|.++
T Consensus       193 -~---------~~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~  235 (294)
T PRK07985        193 -S---------PH-LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTA  235 (294)
T ss_pred             -C---------CC-cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccc
Confidence             0         00 11155322     2222211  246899999999999984

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1.1e-11  Score=116.23  Aligned_cols=172  Identities=13%  Similarity=-0.001  Sum_probs=107.0

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHH
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ++.++|+++||||||.||.+++++|++     .|++|+++.|+....      .   ....++.++.+|+.|.+++++++
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~-----~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~   84 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAA-----AGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALG   84 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHH
Confidence            344568999999999999999999998     899999999975321      0   11236789999999998887665


Q ss_pred             hc-------CCCeeEEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccC
Q 016047           92 SQ-------LTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        92 ~~-------~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                      +.       +|.++|+|+......     +.....+.+|+.|...+.+.+... ...-.+++++||..++.+.      .
T Consensus        85 ~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~------~  158 (313)
T PRK05854         85 EQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGA------I  158 (313)
T ss_pred             HHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCC------c
Confidence            43       677888877533211     245667899999977776665532 1112356666654333211      0


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHHHHHHh----h-----cCCCeeEEEEcCCceee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEV----E-----KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~----~-----~~~~~~~~ilRp~~v~G  207 (396)
                        ....+.++.+..+  ...|+..|.....+    +     ...++.+..+.|+.|-.
T Consensus       159 --~~~~~~~~~~~~~--~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T  212 (313)
T PRK05854        159 --NWDDLNWERSYAG--MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT  212 (313)
T ss_pred             --CcccccccccCcc--hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence              0111222222212  22366543332211    1     13479999999998865

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1.9e-11  Score=111.39  Aligned_cols=157  Identities=11%  Similarity=0.061  Sum_probs=106.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHh------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      +++||||||+|.||.+++++|++     +|++|++++|++....      ....++.++.+|+++++++..+++      
T Consensus         7 ~~~ilItGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          7 DKVVIVTGGASGIGAAISLRLAE-----EGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----cCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            58999999999999999999999     8999999998764320      012467899999999998877775      


Q ss_pred             -cCCCeeEEEEeccCC-C----ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           93 -QLTDVTHIFYVTWTN-R----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~-~----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                       .+|.|+|+++..... .    ++....+++|+.++.++.+++.+. .....+++++||...+      ++.        
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------~~~--------  147 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL------TGQ--------  147 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc------cCC--------
Confidence             467899998742211 1    134567899999999998877653 1123467766542211      110        


Q ss_pred             cCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          166 TEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                            .+  ...|+.     +.+.+....  ...++++..++|+.|+++
T Consensus       148 ------~~--~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~  189 (258)
T PRK08628        148 ------GG--TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTP  189 (258)
T ss_pred             ------CC--CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCH
Confidence                  01  112553     333333221  356899999999999993

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.34  E-value=2.2e-11  Score=109.26  Aligned_cols=115  Identities=17%  Similarity=0.127  Sum_probs=84.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh-HHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-EETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~~~V~h~a  101 (396)
                      .++|++|||||+|+||.+++++|++     +|++|++++|++....  ..++.++.+|++++ +.+.+.+..+|.|+|++
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~a   75 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLA-----QGAQVYGVDKQDKPDL--SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTA   75 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHH-----CCCEEEEEeCCccccc--CCcEEEEECChHHHHHHHHHhhCCCCEEEECC
Confidence            3568999999999999999999998     8999999999764432  24678999999997 44555556678899987


Q ss_pred             Eecc--CC-C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047          102 YVTW--TN-R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus       102 ~~~~--~~-~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      +...  .. .    ++....+++|+.++.++++++...  ..+..+++++||
T Consensus        76 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  127 (235)
T PRK06550         76 GILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCS  127 (235)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            7421  11 1    134567899999999999987643  112346776664

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1e-11  Score=114.13  Aligned_cols=115  Identities=17%  Similarity=-0.020  Sum_probs=82.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS-------QL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (396)
                      +++||||||||.||.+++++|++     +|++|++++|++....   ....+++++.+|++|++++.++++       .+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAA-----LGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999998     8999999998753210   011247889999999988765554       35


Q ss_pred             CCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           95 TDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        95 ~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      |.++|+|+......    +  .....+++|+.|+.++++++...  ..+..+++.+||
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS  137 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVAS  137 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence            67888877532211    1  34557899999988887766543  122457777764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=3.1e-11  Score=109.39  Aligned_cols=208  Identities=13%  Similarity=0.089  Sum_probs=121.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      ++++|||||+|+||..+++.|++     +|++|++++|+....      . ....++.++++|+++++++.++++.    
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQ-----KGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999998     799999999875321      0 0124677899999999877665543    


Q ss_pred             ---CCCeeEEEEeccCC-----------C----ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccc
Q 016047           94 ---LTDVTHIFYVTWTN-----------R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPF  152 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~-----------~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~  152 (396)
                         +|.|+|+++.....           .    +.....+++|+.++.++++++...   ...-..++++|+..      
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~------  153 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA------  153 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc------
Confidence               57789987742210           0    133456789999998777655432   11123455554322      


Q ss_pred             cccccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHH
Q 016047          153 EAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA  225 (396)
Q Consensus       153 ~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  225 (396)
                       .+|..              +  ...|..     +.++.....  ...+++++.++|+.+.++......   ....   .
T Consensus       154 -~~~~~--------------~--~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~---~~~~---~  210 (253)
T PRK08217        154 -RAGNM--------------G--QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK---PEAL---E  210 (253)
T ss_pred             -ccCCC--------------C--CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---HHHH---H
Confidence             22210              1  111443     333332221  246899999999999883211111   1110   0


Q ss_pred             HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCC
Q 016047          226 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD  279 (396)
Q Consensus       226 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~  279 (396)
                      ... ...+..         .+   .+..+++..+.+++......|++|++.++.
T Consensus       211 ~~~-~~~~~~---------~~---~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        211 RLE-KMIPVG---------RL---GEPEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             HHH-hcCCcC---------CC---cCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            000 111211         11   233445777777775544568899987753

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.33  E-value=1.2e-11  Score=111.69  Aligned_cols=155  Identities=18%  Similarity=0.078  Sum_probs=100.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--CCCCeeEEEecCCChHHHHHHHhc----------
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLSQ----------   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~----------   93 (396)
                      ++||||||||+||.+++++|++     +|++|++++|+......  ...++.++++|+.|.+++++++..          
T Consensus         2 ~~vlItGasggiG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQ-----PGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHh-----CCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            4899999999999999999998     89999999997543211  123678899999999888774432          


Q ss_pred             -CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCCCCC
Q 016047           94 -LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        94 -~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                       .|.++|+++......       +.....+++|+.|+..+++.+.+..  ....+++++||...+       ..      
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-------~~------  143 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR-------NA------  143 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc-------CC------
Confidence             455888876532211       1345678999999777766655431  124567776643211       10      


Q ss_pred             CccCCCCCCCCCCcchhH-----HHHHHHHhh-cCCCeeEEEEcCCceee
Q 016047          164 PFTEDMPRLDAPNFYYTL-----EDILFEEVE-KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~~-~~~~~~~~ilRp~~v~G  207 (396)
                             ..+  ...|+.     +.++..+.. ...++++..++|+.+-.
T Consensus       144 -------~~~--~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t  184 (243)
T PRK07023        144 -------YAG--WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT  184 (243)
T ss_pred             -------CCC--chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence                   001  122554     333333321 23579999999987744

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.32  E-value=9.3e-12  Score=114.51  Aligned_cols=114  Identities=20%  Similarity=0.133  Sum_probs=82.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHh-------cCCCe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS-------QLTDV   97 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~V   97 (396)
                      |++|||||+|+||.+++++|++     +|++|++++|+..... ....+++++.+|+++.+++.++++       .+|.|
T Consensus         2 k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   76 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKA-----AGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVL   76 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899999999999999999998     8999999999753210 011357789999999988776654       46789


Q ss_pred             eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecc
Q 016047           98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG  144 (396)
Q Consensus        98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~  144 (396)
                      +|+++......      ++....+++|+.|+.++++++... .....+++++||
T Consensus        77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS  130 (274)
T PRK05693         77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS  130 (274)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence            99987432211      134567899999999998887543 111245565543

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.32  E-value=2.2e-11  Score=108.71  Aligned_cols=159  Identities=20%  Similarity=0.195  Sum_probs=108.4

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHh
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .+.+++++||||||+-||..++++|.+     +||+|+.+.|+.+..      ..  ..-.++++.+|+++++++.....
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~-----~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~   76 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLAR-----RGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLED   76 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHH
Confidence            345668999999999999999999999     899999999986431      11  11356799999999988766553


Q ss_pred             -------cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047           93 -------QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                             .+|..+++|+.....      .+...+.+++|+.++..|-.+....  ..+--+++-++|...|..       
T Consensus        77 ~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p-------  149 (265)
T COG0300          77 ELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP-------  149 (265)
T ss_pred             HHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC-------
Confidence                   367788887754322      1145678899999987776655543  112346676654332211       


Q ss_pred             CCCCCCCccCCCCCCCCCCcchh--------HHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYT--------LEDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~--------~e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                    .|.... |+        ..+.|+... +..|+.++.+.|+.+.-
T Consensus       150 --------------~p~~av-Y~ATKa~v~~fSeaL~~EL-~~~gV~V~~v~PG~~~T  191 (265)
T COG0300         150 --------------TPYMAV-YSATKAFVLSFSEALREEL-KGTGVKVTAVCPGPTRT  191 (265)
T ss_pred             --------------CcchHH-HHHHHHHHHHHHHHHHHHh-cCCCeEEEEEecCcccc
Confidence                          011111 43        255566555 78899999999887665

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.32  E-value=2.2e-11  Score=113.04  Aligned_cols=115  Identities=18%  Similarity=0.137  Sum_probs=83.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +++||||||+|+||.+++++|++     +|++|++++|+....      . .....+.++.+|++|++++.++++     
T Consensus        40 ~k~vlItGasggIG~~la~~La~-----~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFAR-----RGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            48999999999999999999998     899999999975321      0 011356789999999998877776     


Q ss_pred             --cCCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 --QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                        .+|.|+|+|+......        ......+++|+.|+.++++++...  .....+++++||
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS  178 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT  178 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence              5788999877532211        122456899999988888766432  112456776664

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1.7e-11  Score=112.03  Aligned_cols=155  Identities=15%  Similarity=0.094  Sum_probs=102.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh------
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      ++||||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|++|++.+..++.      
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~-----~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   76 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLAR-----AGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF   76 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            6899999999999999999998     899999999975321      0 012467889999999998877665      


Q ss_pred             -cCCCeeEEEEeccCCC-----c--cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 -QLTDVTHIFYVTWTNR-----S--TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~~-----~--~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                       ..|.|+|+++......     +  ...+.+++|+.++.++++++... ..+..+++++||...|       ..      
T Consensus        77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~-------~~------  143 (263)
T PRK06181         77 GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGL-------TG------  143 (263)
T ss_pred             CCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEeccccc-------CC------
Confidence             4678999977432211     1  23456899999999999988643 1123456655532211       11      


Q ss_pred             CccCCCCCCCCCCcchhHH-----HHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          164 PFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                             ..+...  |+..     .+.....  ....++++.+++|+.+..
T Consensus       144 -------~~~~~~--Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t  185 (263)
T PRK06181        144 -------VPTRSG--YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVAT  185 (263)
T ss_pred             -------CCCccH--HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCcccc
Confidence                   001112  5532     2222211  134689999999998877

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.32  E-value=2.7e-11  Score=110.85  Aligned_cols=114  Identities=12%  Similarity=0.096  Sum_probs=85.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-------CCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~~   96 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....  ...++.++.+|++|++++.++++.       +|.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~-----~G~~v~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLA-----NGANVVNADIHGGDG--QHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCcccc--ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            358999999999999999999999     899999999876542  124678899999999888776653       577


Q ss_pred             eeEEEEeccCC---------------CccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047           97 VTHIFYVTWTN---------------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  144 (396)
Q Consensus        97 V~h~a~~~~~~---------------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  144 (396)
                      |+|+|+.....               .++....+++|+.++.++++++.+.-  .+..+++++||
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  145 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSS  145 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            99988743210               01335578999999999999887541  12345776664

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.32  E-value=2.2e-11  Score=111.80  Aligned_cols=155  Identities=15%  Similarity=0.072  Sum_probs=100.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh------
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      |+||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|++++.+++.      
T Consensus         1 ~~vlVtGasggIG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   75 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAR-----EGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW   75 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999     899999999875321      0 112467889999999988777665      


Q ss_pred             -cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 -QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                       .+|.|+|+++......  +    +....+++|+.++.++.+++...  ..+..+++++||...+       .       
T Consensus        76 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-------~-------  141 (270)
T PRK05650         76 GGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGL-------M-------  141 (270)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhc-------C-------
Confidence             4677888877533211  1    23446789988887766654322  1124567766643211       1       


Q ss_pred             CccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeec
Q 016047          164 PFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      +.       + ....|+..|.        +.... ...|+++++++|+.+..+
T Consensus       142 ~~-------~-~~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t~  185 (270)
T PRK05650        142 QG-------P-AMSSYNVAKAGVVALSETLLVEL-ADDEIGVHVVCPSFFQTN  185 (270)
T ss_pred             CC-------C-CchHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEecCccccC
Confidence            00       0 0112553222        22222 346899999999999874

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.32  E-value=2.2e-11  Score=110.53  Aligned_cols=115  Identities=17%  Similarity=0.081  Sum_probs=86.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-------CCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~~   96 (396)
                      ++|++|||||+|.||.+++++|++     +|++|++++|+..... ...+++++++|+.+++++.+++..       +|.
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~-----~g~~v~~~~r~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLA-----AGATVVVCGRRAPETV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCChhhhh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999998     8999999999764311 224678999999999888777654       478


Q ss_pred             eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047           97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  144 (396)
Q Consensus        97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  144 (396)
                      |+|+|+......      ......+++|+.++.++++++.+.   .....+++++||
T Consensus        79 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS  135 (252)
T PRK07856         79 LVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS  135 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence            999887432111      134567899999999999987653   112346776664

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.31  E-value=1.3e-11  Score=112.26  Aligned_cols=157  Identities=14%  Similarity=0.089  Sum_probs=100.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhc-------CC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQ-------LT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~   95 (396)
                      +++||||||+|+||.+++++|++     +|++|++++|+....  ........++++|++|++++.++++.       +|
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAA-----EGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVD   81 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999998     899999999975421  00011236889999999988777763       57


Q ss_pred             CeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           96 DVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        96 ~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      .|+|+++......        ......+++|+.|+.++++++...  ..+..+++++||.      ...+|..       
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~------~~~~g~~-------  148 (255)
T PRK06057         82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASF------VAVMGSA-------  148 (255)
T ss_pred             EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcch------hhccCCC-------
Confidence            7889876432111        124567899999998887766532  1123456655531      1122210       


Q ss_pred             cCCCCCCCCCCcchhHHH-----HHHH---HhhcCCCeeEEEEcCCceeec
Q 016047          166 TEDMPRLDAPNFYYTLED-----ILFE---EVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~e~-----~l~~---~~~~~~~~~~~ilRp~~v~G~  208 (396)
                              .....|+..|     +...   .+ ...+++++++||+.+.++
T Consensus       149 --------~~~~~Y~~sKaal~~~~~~l~~~~-~~~gi~v~~i~pg~v~t~  190 (255)
T PRK06057        149 --------TSQISYTASKGGVLAMSRELGVQF-ARQGIRVNALCPGPVNTP  190 (255)
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHH-HhhCcEEEEEeeCCcCCc
Confidence                    0011254322     2221   22 345899999999999873

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.31  E-value=8.8e-12  Score=112.07  Aligned_cols=158  Identities=15%  Similarity=0.065  Sum_probs=100.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ-----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   93 (396)
                      +++||||||+|+||.++++.|++     .|++|++++|++...      .....+++++.+|+++++++.++++.     
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALK-----EGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999998     899999999976421      11113678999999999887765544     


Q ss_pred             --CCCeeEEEEeccCCC----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           94 --LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        94 --~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                        +|.++|+++......    +.....+++|+.+..++++.+.+.-.+-.+++++|+..      +.++.       .  
T Consensus        80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~------~~~~~-------~--  144 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS------GIYKA-------S--  144 (238)
T ss_pred             CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch------hcccC-------C--
Confidence              466777765322111    12345578999998888877665411123455554311      01110       0  


Q ss_pred             CCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          168 DMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       168 ~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                        +  +..  .|..     +.+++....  ...+++++++||+.++++
T Consensus       145 --~--~~~--~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~  186 (238)
T PRK05786        145 --P--DQL--SYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGD  186 (238)
T ss_pred             --C--Cch--HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCC
Confidence              0  111  1443     323322221  345899999999999983

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.31  E-value=2.5e-11  Score=108.24  Aligned_cols=102  Identities=19%  Similarity=0.190  Sum_probs=77.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHh-----cCCCee
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS-----QLTDVT   98 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~~~V~   98 (396)
                      ++|+||||+|+||++++++|.+     .|++|++++|++...  .....++.++.+|++|+++++++++     .+|.|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLE-----RGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHh-----CCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            6899999999999999999999     899999999986532  1112357788999999988777665     367799


Q ss_pred             EEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc
Q 016047           99 HIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        99 h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      |+++......        .+....+.+|+.++.++++++...
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  118 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQ  118 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHh
Confidence            9887532111        134456788999999998887654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.30  E-value=1.6e-11  Score=111.40  Aligned_cols=157  Identities=13%  Similarity=0.093  Sum_probs=102.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C--CCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W--NADHLVEYVQCDVSDPEETQAKLSQ-----   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~--~~~~~v~~~~~Dl~d~~~~~~~~~~-----   93 (396)
                      ++|+||||||+|+||+++++.|++     .|++|+++.++....   .  ....++.++++|+.|++++.++++.     
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAR-----EGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            357999999999999999999998     899998776543211   0  0113678899999999888776654     


Q ss_pred             ---CCCeeEEEEeccC--------CC----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccc
Q 016047           94 ---LTDVTHIFYVTWT--------NR----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        94 ---~~~V~h~a~~~~~--------~~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                         +|.++|+|+....        ..    .+....+++|+.++.++++++...  ..+..++++++|..         +
T Consensus        79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~---------~  149 (253)
T PRK08642         79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNL---------F  149 (253)
T ss_pred             CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcc---------c
Confidence               6779998764211        00    123557899999999999988643  11234566555311         1


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                           ..+      ..+...  |+.     +.+++....  ...++.+..++|+.+-.
T Consensus       150 -----~~~------~~~~~~--Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t  194 (253)
T PRK08642        150 -----QNP------VVPYHD--YTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRT  194 (253)
T ss_pred             -----cCC------CCCccc--hHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCC
Confidence                 001      111112  543     444444321  34679999999998865

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.30  E-value=1.9e-11  Score=110.58  Aligned_cols=103  Identities=17%  Similarity=0.074  Sum_probs=73.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      |.|+||||||+|+||..+++.|++     +|++|+++.++....       . ....++.++.+|+.|++++.++++   
T Consensus         1 m~k~ilItGas~giG~~la~~l~~-----~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (248)
T PRK06947          1 MRKVVLITGASRGIGRATAVLAAA-----RGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQ   75 (248)
T ss_pred             CCcEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHH
Confidence            568999999999999999999998     899988766443211       0 012367899999999988766554   


Q ss_pred             ----cCCCeeEEEEeccCCC---c----cHHHHHHhHHHHHHHHHHHHcc
Q 016047           93 ----QLTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                          .+|.|+|+++......   +    +....+.+|+.++.++++++.+
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  125 (248)
T PRK06947         76 SAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAAR  125 (248)
T ss_pred             HhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence                4677889887432211   1    2355689999999888764443

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.30  E-value=2.7e-11  Score=109.64  Aligned_cols=158  Identities=13%  Similarity=0.065  Sum_probs=104.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-----CCCCCeeEEEecCCChHHHHHHHh------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----NADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      ++|+||||||+|+||.+++++|++     +|++|++++|+.....     ....++.++.+|+++++++..+++      
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAE-----AGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999     8999999998652110     012357899999999988876554      


Q ss_pred             -cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCC-cceEEEeccceeecccccccccCCCCC
Q 016047           93 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APN-LRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~-~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                       .+|.++|+++......      ......+++|+.++.++++++.+.  ... ..+++++||...|       +.     
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~-----  146 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF-------QG-----  146 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc-------cC-----
Confidence             3677888877532111      134566899999999999987643  111 3466766643322       11     


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                      .+        ..+.  |..     +.+.+....  ...|+++.+++|+.|..+
T Consensus       147 ~~--------~~~~--Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~  189 (248)
T TIGR01832       147 GI--------RVPS--YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATN  189 (248)
T ss_pred             CC--------CCch--hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCc
Confidence            00        0011  432     333322221  345899999999998773

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.30  E-value=6.8e-11  Score=107.43  Aligned_cols=154  Identities=17%  Similarity=0.169  Sum_probs=98.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCCC-------CC--CCCCeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN-------WN--ADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~-------~~--~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      .+++||||||+|.||.+++++|++     + |++|++++|++...       ..  ...+++++.+|++|.+++.+.++ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~-----~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~   81 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLK-----NAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDA   81 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHh-----cCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHH
Confidence            357899999999999999999998     5 58999999986531       11  11368899999999987654443 


Q ss_pred             -----cCCCeeEEEEeccCCCc---cH---HHHHHhHHHHHHHH----HHHHcccCCCcceEEEeccceeeccccccccc
Q 016047           93 -----QLTDVTHIFYVTWTNRS---TE---AENCKINGSMFRNV----LRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~~---~~---~~~~~~nv~gt~~l----l~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                           .+|.++|+++.......   ++   .+.+++|+.++.++    ++.+++.+  ..+++++||..         |.
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~--~~~iv~isS~~---------g~  150 (253)
T PRK07904         82 AFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG--FGQIIAMSSVA---------GE  150 (253)
T ss_pred             HHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC--CceEEEEechh---------hc
Confidence                 46767777764322111   11   24589999988764    55555432  45777766432         11


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceee
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      .     +    .+  .  ...|+..|        .+.... +..++++++++|+.+..
T Consensus       151 ~-----~----~~--~--~~~Y~~sKaa~~~~~~~l~~el-~~~~i~v~~v~Pg~v~t  194 (253)
T PRK07904        151 R-----V----RR--S--NFVYGSTKAGLDGFYLGLGEAL-REYGVRVLVVRPGQVRT  194 (253)
T ss_pred             C-----C----CC--C--CcchHHHHHHHHHHHHHHHHHH-hhcCCEEEEEeeCceec
Confidence            0     0    00  1  11144322        233333 56789999999998876

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.30  E-value=2.7e-11  Score=107.79  Aligned_cols=163  Identities=16%  Similarity=0.083  Sum_probs=102.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHh-----cCCCeeE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLS-----QLTDVTH   99 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~~~V~h   99 (396)
                      ++++||||+|+||++++++|++     .|++|++++|++... .....+++++.+|+++.+++.+++.     .+|.|+|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRA-----DGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHh-----CCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence            5899999999999999999998     899999999975431 0111356789999999988877543     2567888


Q ss_pred             EEEeccCC--------CccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047          100 IFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus       100 ~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      +++.....        .++....+++|+.++.++++++.+.- ..-.++++++|..      +.++.     .+..   +
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~------~~~~~-----~~~~---~  142 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRM------GSIGD-----ATGT---T  142 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcc------ccccc-----ccCC---C
Confidence            87653111        11456688999999999999887531 1123455554321      12221     0000   0


Q ss_pred             CCCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          171 RLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       171 ~~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      ..+......+.+.++.....+..++++..++|+.+.-
T Consensus       143 ~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t  179 (222)
T PRK06953        143 GWLYRASKAALNDALRAASLQARHATCIALHPGWVRT  179 (222)
T ss_pred             ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeec
Confidence            0011111122344444443233468999999998876

>PRK08017 oxidoreductase; Provisional

Probab=99.29  E-value=3.3e-11  Score=109.54  Aligned_cols=114  Identities=17%  Similarity=0.160  Sum_probs=79.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhc--------C
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--------L   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~--------~   94 (396)
                      |.++||||||+|+||.++++.|++     +|++|++++|++... .....+++.+.+|+.|.+++.+++..        +
T Consensus         1 m~k~vlVtGasg~IG~~la~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          1 MQKSVLITGCSSGIGLEAALELKR-----RGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            457899999999999999999998     899999999976432 11123578899999999877665543        3


Q ss_pred             CCeeEEEEeccCCC------ccHHHHHHhHHHHHHHH----HHHHcccCCCcceEEEecc
Q 016047           95 TDVTHIFYVTWTNR------STEAENCKINGSMFRNV----LRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        95 ~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~l----l~a~~~~~~~~~~~~~~s~  144 (396)
                      +.++|+++......      +.....+++|+.|+.++    ++++++.+  ..+++++||
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--~~~iv~~ss  133 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG--EGRIVMTSS  133 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CCEEEEEcC
Confidence            45777765322111      13456789999998776    45554432  456776654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.28  E-value=1.7e-10  Score=103.86  Aligned_cols=114  Identities=18%  Similarity=0.183  Sum_probs=79.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-----NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      |.+|||||+|+||.+++++|++     .|++|+++.|+....   +     ....++.++.+|+.|++++.++++     
T Consensus         1 k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAK-----DGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE   75 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999998     899999998842211   0     012367899999999988766554     


Q ss_pred             --cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                        .+|.|+|+++.....      .++....+.+|+.++..+++++...  ..+..+++++||
T Consensus        76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss  137 (242)
T TIGR01829        76 LGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISS  137 (242)
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence              367788887643211      1134566789999987766554432  112456776664

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.28  E-value=5.4e-11  Score=108.31  Aligned_cols=104  Identities=20%  Similarity=0.115  Sum_probs=79.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      ..+++||||||+|+||++++++|.+     .|++|++++|++...      . ....+++++.+|+++++++.++++   
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQ-----AGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4468999999999999999999998     899999999975321      0 012367899999999988877765   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcc
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                          .+|.|+|+++......      .+....+++|+.++.++++++..
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  130 (258)
T PRK06949         82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAK  130 (258)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHH
Confidence                3678999887432211      13556789999999999887753

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.28  E-value=5.2e-11  Score=108.60  Aligned_cols=115  Identities=17%  Similarity=0.085  Sum_probs=84.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC---CCCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +|+||||||+|.||.+++++|++     +|++|++++|+....      ..   ...++.++.+|++|++++.++++   
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~-----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAR-----EGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            58999999999999999999999     899999999975321      10   12357789999999988877665   


Q ss_pred             ----cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                          .+|.++|+|+.....      .++....+++|+.++.++++++...  ..+..+++++||
T Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  145 (260)
T PRK07063         82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIAS  145 (260)
T ss_pred             HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECC
Confidence                467789988743211      1134567899999999888877643  112346776654

>PRK09242 tropinone reductase; Provisional

Probab=99.28  E-value=2e-10  Score=104.63  Aligned_cols=158  Identities=16%  Similarity=-0.002  Sum_probs=103.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .+|++|||||+|.||++++++|.+     +|++|++++|+....         .....++.++.+|+++++++.+++.  
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLG-----LGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            358999999999999999999998     899999999975321         0012467889999999987766554  


Q ss_pred             -----cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047           93 -----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                           .+|.|+|+++.....      .++....+++|+.++.++++++...  ..+..+++++||...+       ..  
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~-------~~--  153 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL-------TH--  153 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC-------CC--
Confidence                 356788887642111      1145567899999999998887543  1123567766642211       10  


Q ss_pred             CCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                           .      .....  |+.     +.++....  ....++++..++|+.+..+
T Consensus       154 -----~------~~~~~--Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~  196 (257)
T PRK09242        154 -----V------RSGAP--YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTP  196 (257)
T ss_pred             -----C------CCCcc--hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCc
Confidence                 0      01111  432     33332221  1346899999999999884

>PRK12742 oxidoreductase; Provisional

Probab=99.28  E-value=4.5e-11  Score=107.37  Aligned_cols=158  Identities=13%  Similarity=0.046  Sum_probs=100.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHhc---CCCe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQ---LTDV   97 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V   97 (396)
                      ++|+||||||+|.||++++++|++     +|++|+++.|+....   .....+++++.+|++|.+.+.+.+..   +|.+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l   79 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVT-----DGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDIL   79 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence            358999999999999999999998     899998877643211   10112467889999999888776654   5678


Q ss_pred             eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC
Q 016047           98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  171 (396)
Q Consensus        98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~  171 (396)
                      +|+++......      ++....+++|+.++.+++.++.+.-..-.+++++||.         .+.    ..+      .
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~---------~~~----~~~------~  140 (237)
T PRK12742         80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV---------NGD----RMP------V  140 (237)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc---------ccc----cCC------C
Confidence            88876432211      1346678999999998876665542123456655531         110    011      1


Q ss_pred             CCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047          172 LDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       172 ~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                      .+...  |+.     +.+......  ...++++.+++|+.+..
T Consensus       141 ~~~~~--Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t  181 (237)
T PRK12742        141 AGMAA--YAASKSALQGMARGLARDFGPRGITINVVQPGPIDT  181 (237)
T ss_pred             CCCcc--hHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccC
Confidence            01111  442     443333221  34679999999998876

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.27  E-value=1.3e-10  Score=100.99  Aligned_cols=155  Identities=20%  Similarity=0.150  Sum_probs=104.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHH-------h
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKL-------S   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~-------~   92 (396)
                      +|.++|||||+-||.+++++|.+     .|++|++..|+.+..     ......+..+..|++|.+++.+++       .
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~-----~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           6 GKVALITGASSGIGEATARALAE-----AGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHH-----CCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            47899999999999999999999     899999999987531     111135788999999998755544       3


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|.|+..-...      +++..++++|+.|+.+...++...  ..+-.+++-+||+.         |.     .+
T Consensus        81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA---------G~-----~~  146 (246)
T COG4221          81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA---------GR-----YP  146 (246)
T ss_pred             cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc---------cc-----cc
Confidence            4677888777543311      156788999999998888877654  12234666655432         11     00


Q ss_pred             ccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                             .|...- |..        .+-|+..+ ...+++++.+-|+.|-.
T Consensus       147 -------y~~~~v-Y~ATK~aV~~fs~~LR~e~-~g~~IRVt~I~PG~v~~  188 (246)
T COG4221         147 -------YPGGAV-YGATKAAVRAFSLGLRQEL-AGTGIRVTVISPGLVET  188 (246)
T ss_pred             -------CCCCcc-chhhHHHHHHHHHHHHHHh-cCCCeeEEEecCceecc
Confidence                   011111 432        33444433 45789999999998855

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.27  E-value=4.7e-11  Score=108.59  Aligned_cols=115  Identities=17%  Similarity=0.099  Sum_probs=79.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--CCCCCeeEEEecCCChHHHHHHHh-------cCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLS-------QLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~   95 (396)
                      +|++|||||+|.||.+++++|.+     .|++|+++.|+.....  ....++.++.+|++|++++.++++       .+|
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLR-----EGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD   81 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999     8999998877643210  011257889999999998877665       467


Q ss_pred             CeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           96 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        96 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      .|+|+++......      ++....+++|+.++..+..++.+.  ..+..+++++||
T Consensus        82 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS  138 (255)
T PRK06463         82 VLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIAS  138 (255)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            7999887532111      134567899999965554443322  112356776664

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.27  E-value=1.1e-10  Score=107.45  Aligned_cols=104  Identities=15%  Similarity=0.039  Sum_probs=79.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------------CCCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------------NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------------~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      +++++|||||+|+||.+++++|++     +|++|++++|+.....              ....++.++.+|+++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAAR-----DGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            357999999999999999999998     8999999999754210              011357789999999998877


Q ss_pred             HHh-------cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc
Q 016047           90 KLS-------QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        90 ~~~-------~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      ++.       .+|.|+|+|+......  +    +....+++|+.++.++++++...
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  135 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH  135 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence            665       4677999887532211  1    34557889999999999988754

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.27  E-value=4.3e-11  Score=108.76  Aligned_cols=116  Identities=17%  Similarity=0.107  Sum_probs=85.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+++||||||+|+||.+++++|++     +|++|++++|+....    ......+..+.+|+++++++.+++.       
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAA-----KGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            458999999999999999999998     899999999975321    0112356789999999988877665       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      .+|.|+|+++......      .+....+++|+.|+.++++++...  .....+++++||
T Consensus        89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  148 (255)
T PRK06841         89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS  148 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            4578999887532211      133457899999999999988753  112456776664

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.26  E-value=1.2e-10  Score=105.91  Aligned_cols=116  Identities=16%  Similarity=0.051  Sum_probs=83.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+|+||||||+|+||++++++|++     .|++|++++|++...      . ....++.++.+|++|++++..+++.   
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAG-----AGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----cCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999998     899999999975321      0 0123578999999999888776654   


Q ss_pred             ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                          +|.|+|+++......      ++....+.+|+.++.++.+++.+.  .....+++++|+
T Consensus        85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss  147 (256)
T PRK06124         85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITS  147 (256)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEee
Confidence                466888876432110      134567899999999998777543  112456666654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.26  E-value=4.7e-11  Score=109.09  Aligned_cols=116  Identities=20%  Similarity=0.212  Sum_probs=83.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      .++++|||||+|+||++++++|++     +|++|++++|+....     . ....++.++.+|+++++++++++..    
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFAR-----HGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999875311     0 0123577899999999888776653    


Q ss_pred             ---CCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           94 ---LTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                         +|.|+|+++......  .    ...+.+++|+.++.++++++.+.  .....+++++||
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS  141 (263)
T PRK08226         80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSS  141 (263)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence               577889887532211  1    23456899999999999887653  112345665553

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.25  E-value=1.3e-10  Score=105.72  Aligned_cols=104  Identities=13%  Similarity=0.030  Sum_probs=77.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ++|++|||||+|+||.+++++|++     +|++|+++.+++....           ....+++++++|+++++++.+++.
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~-----~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAA-----QGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHH-----CCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHH
Confidence            358999999999999999999998     8999887776542110           012367889999999998877665


Q ss_pred             -------cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 -------QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                             .+|.++|+|+.....    .  +.....+++|+.++..+++++.+.
T Consensus        82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~  134 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH  134 (257)
T ss_pred             HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence                   367788888753211    1  134567899999999999988754

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.25  E-value=5.6e-11  Score=108.67  Aligned_cols=116  Identities=20%  Similarity=0.122  Sum_probs=85.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .++++|||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|+++++++.+++.    
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAE-----AGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVE   83 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 012367889999999998876655    


Q ss_pred             ---cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047           93 ---QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  144 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  144 (396)
                         .+|.|+|+|+.....  .    ++....+.+|+.++.++++++...   .....+++++||
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS  147 (263)
T PRK07814         84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISS  147 (263)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence               467899987642211  1    145667899999999999998753   112356666653

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.25  E-value=9.2e-11  Score=106.59  Aligned_cols=116  Identities=18%  Similarity=0.038  Sum_probs=81.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +++++|||||+|.||.+++++|.+     .|++|++++|++...      . ....++.++.+|+++++++.++++    
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAR-----EGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            357999999999999999999998     899999999975421      0 012357789999999988777665    


Q ss_pred             ---cCCCeeEEEEeccC--C--C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 ---QLTDVTHIFYVTWT--N--R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~--~--~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                         .+|.++|+|+....  .  .   ++....+++|+.++.++.+++...  ..+..+++++||
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS  143 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTST  143 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence               46778888764321  1  0   134567899998877776654432  112345666654

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.25  E-value=8.9e-11  Score=107.21  Aligned_cols=115  Identities=12%  Similarity=0.119  Sum_probs=83.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHhc-------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLSQ-------   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~~-------   93 (396)
                      ++++|||||+|.||.+++++|++     .|++|++++|+....  .  ....++.++.+|++|.+++.++++.       
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   80 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVA-----AGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGR   80 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999     899999999975421  0  0123578999999999888776653       


Q ss_pred             CCCeeEEEEeccCC---C--ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecc
Q 016047           94 LTDVTHIFYVTWTN---R--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  144 (396)
Q Consensus        94 ~~~V~h~a~~~~~~---~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  144 (396)
                      +|.++|+|+.....   .  .+....+++|+.++.++++++...- .+-.+++++||
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS  137 (261)
T PRK08265         81 VDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTS  137 (261)
T ss_pred             CCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence            57788887642111   1  1445678999999999988776531 12245666653

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.25  E-value=8.2e-11  Score=107.20  Aligned_cols=157  Identities=14%  Similarity=0.094  Sum_probs=102.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .+|+||||||+|+||.+++++|++     .|++|+++.|+....     . ....++.++.+|+++.+++..+++     
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAK-----AGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999998     899999999873210     0 012467899999999988877665     


Q ss_pred             --cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.++|+++.....      ..+....+++|+.++.++++++.+.  ..+..+++++|+...+.+            
T Consensus        89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  156 (258)
T PRK06935         89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG------------  156 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC------------
Confidence              467788887743211      1134567899999988887766543  112356776664322210            


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                      .+        ..+.  |+.     +.+...+..  ...|+++.+++|+.|..
T Consensus       157 ~~--------~~~~--Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t  198 (258)
T PRK06935        157 GK--------FVPA--YTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKT  198 (258)
T ss_pred             CC--------Cchh--hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccc
Confidence            00        0011  442     333332221  34579999999998876

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.25  E-value=7.2e-11  Score=107.91  Aligned_cols=114  Identities=18%  Similarity=0.143  Sum_probs=83.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      +++||||||+|+||.+++++|++     +|++|++++|++...      .....++.++.+|++|++++.++++      
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAA-----AGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            57899999999999999999999     899999999975321      1112468899999999987766554      


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT  143 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s  143 (396)
                      .+|.|+|+|+......      ......+++|+.|+.++++++.+.  ..+..++++++
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~is  138 (263)
T PRK09072         80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVG  138 (263)
T ss_pred             CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEec
Confidence            4677999877532211      134567789999999999988653  11234566554

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.24  E-value=7.3e-11  Score=107.18  Aligned_cols=115  Identities=19%  Similarity=0.120  Sum_probs=82.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      +++||||||+|+||.+++++|++     .|++|++++|+....      . ....++.++.+|++|.+++.++++.    
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAR-----EGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999998     899999999975321      0 0123678999999999888776654    


Q ss_pred             ---CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           94 ---LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                         +|.|+|+++......       ++....+++|+.++.++++++...  ..+..+++++||
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS  144 (253)
T PRK06172         82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTAS  144 (253)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence               477889887532111       134567889999998776654432  112346666654

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.24  E-value=5.9e-11  Score=107.73  Aligned_cols=115  Identities=16%  Similarity=0.039  Sum_probs=83.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|++|||||+|.||.+++++|++     .|++|++++|+....      .. ...++.++++|++|++++.+++.     
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAE-----EGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK   75 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999998     899999999975321      00 12467899999999988876554     


Q ss_pred             --cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc--C-CCcceEEEecc
Q 016047           93 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN--A-PNLRHVCLQTG  144 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~--~-~~~~~~~~~s~  144 (396)
                        .+|.|+|+++......  +    .....+++|+.++.++++++.+.  . ....+++++||
T Consensus        76 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS  138 (252)
T PRK07677         76 FGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVA  138 (252)
T ss_pred             hCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcC
Confidence              3577888876422111  1    34567899999999999988543  1 11246676654

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.24  E-value=7.1e-11  Score=108.02  Aligned_cols=117  Identities=16%  Similarity=0.028  Sum_probs=83.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      .++++||||||+|+||.+++++|++     .|++|++++|++...      . ....++.++.+|++|++++.++++.  
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFAR-----AGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIA   81 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHH
Confidence            3458999999999999999999998     899999999975321      0 0113567889999999888776654  


Q ss_pred             -----CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecc
Q 016047           94 -----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG  144 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~  144 (396)
                           +|.|+|+++.....      .++....+++|+.|+.++++++... ..+-.+++++|+
T Consensus        82 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss  144 (264)
T PRK07576         82 DEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISA  144 (264)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence                 57788887532111      1134556789999999999987653 111135665553

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.23  E-value=8.8e-11  Score=106.87  Aligned_cols=116  Identities=12%  Similarity=0.068  Sum_probs=82.3

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------------C-CCCCCeeEEEecCCC
Q 016047           24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------------W-NADHLVEYVQCDVSD   83 (396)
Q Consensus        24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------------~-~~~~~v~~~~~Dl~d   83 (396)
                      ++++||||||||  .||.+++++|++     .|++|++++|++.+.                 . ....+++++.+|+++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   78 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAA-----KGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQ   78 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHH-----cCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCC
Confidence            458999999996  699999999998     899999999873210                 0 001357899999999


Q ss_pred             hHHHHHHHhc-------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc-C-CCcceEEEecc
Q 016047           84 PEETQAKLSQ-------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-A-PNLRHVCLQTG  144 (396)
Q Consensus        84 ~~~~~~~~~~-------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~-~~~~~~~~~s~  144 (396)
                      .+++..+++.       +|.|+|+|+......      .+....+++|+.++.++++++... . ....+++++|+
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss  154 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTS  154 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECC
Confidence            9887665543       567888876422111      134556899999999999988653 1 12346776664

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.23  E-value=8.6e-11  Score=106.77  Aligned_cols=157  Identities=11%  Similarity=0.013  Sum_probs=104.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....      .. ...++..+.+|++|++++.+++..    
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~-----~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAE-----YGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            57999999999999999999999     899999999875321      00 123567889999999888776643    


Q ss_pred             ---CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           94 ---LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                         +|.|+|+++.....      .++....+++|+.++.++++++.+.  ..+..+++++||...      .++.     
T Consensus        84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~------~~~~-----  152 (254)
T PRK08085         84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS------ELGR-----  152 (254)
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh------ccCC-----
Confidence               67799988743211      1134567899999998888877654  122456776654211      1110     


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                               .....  |..     +.+......  ...|+++..++|+.+..+
T Consensus       153 ---------~~~~~--Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~  194 (254)
T PRK08085        153 ---------DTITP--YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTE  194 (254)
T ss_pred             ---------CCCcc--hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCc
Confidence                     01111  432     333333221  345899999999999884

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.9e-10  Score=103.51  Aligned_cols=114  Identities=17%  Similarity=0.104  Sum_probs=77.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCCh--HHHHHH----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDP--EETQAK----   90 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~--~~~~~~----   90 (396)
                      +++|+||||+|+||.+++++|++     +|++|++++|++...        ......+.++.+|+.+.  +++..+    
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAA-----AGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHH-----cCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence            47999999999999999999998     899999999986421        00113466788999753  333332    


Q ss_pred             ---H-hcCCCeeEEEEeccCC---Cc----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 016047           91 ---L-SQLTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT  143 (396)
Q Consensus        91 ---~-~~~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s  143 (396)
                         + ..+|.|+|+|+.....   .+    +....+++|+.|+.++++++.+.  ...-.++++++
T Consensus        81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s  146 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVG  146 (239)
T ss_pred             HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence               2 3467899998853211   11    34456899999999998887654  11123555554

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.3e-10  Score=105.67  Aligned_cols=159  Identities=13%  Similarity=-0.020  Sum_probs=102.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      +|++|||||+|.||.+++++|.+     .|++|++++|+....       .. ...++.++.+|++|++++.+++..   
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~-----~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQ-----AGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999     899999999875321       00 123577899999999888776654   


Q ss_pred             ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          +|.++|+|+......      ++....+++|+.++..+++++...  ..+..+++++||...      ..+.    
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~------~~~~----  152 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSG------IIVN----  152 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhh------cCCC----
Confidence                477888877532211      134567899999998777765432  112345666653221      1110    


Q ss_pred             CCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                      ..+        +  ...|+..|     +.+...  ....|+++.+++|+.+..+
T Consensus       153 ~~~--------~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~  196 (254)
T PRK06114        153 RGL--------L--QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATP  196 (254)
T ss_pred             CCC--------C--cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCc
Confidence            000        0  11255322     222221  1356899999999998773

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1.6e-10  Score=109.29  Aligned_cols=116  Identities=18%  Similarity=0.064  Sum_probs=80.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +++|+||||+|.||.+++++|.+     +|++|++++|+....      . ....++.++.+|++|+++++++++     
T Consensus         8 ~k~vlITGas~gIG~~la~~la~-----~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFAR-----RGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999     899999999975321      0 012357789999999998877654     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccc
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT  145 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~  145 (396)
                        .+|.++|+++......      +.....+++|+.|+.++..++.+.  ..+..+++++||.
T Consensus        83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~  145 (334)
T PRK07109         83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSA  145 (334)
T ss_pred             CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCCh
Confidence              4677888877432111      133556788888776655554433  1123567766643

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1.1e-10  Score=105.97  Aligned_cols=117  Identities=13%  Similarity=0.083  Sum_probs=82.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .++++||||||+|+||.+++++|.+     .|++|++++|+....      . .....+.++++|+.+.+++.++++   
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQ-----QGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            3458999999999999999999999     899999999975321      0 011356789999999987766554   


Q ss_pred             ----cCCCeeEEEEeccC--C--Cc---cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 ----QLTDVTHIFYVTWT--N--RS---TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~--~--~~---~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                          .+|.|+|+++....  .  ..   .....+++|+.++.++++++.+.  ..+..+++++||
T Consensus        81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  145 (252)
T PRK07035         81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS  145 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence                36778888763211  1  11   34567899999998888777543  122456666653

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.21  E-value=1.9e-10  Score=104.90  Aligned_cols=158  Identities=13%  Similarity=0.052  Sum_probs=103.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      ++|+|+||||+|+||++++++|.+     +|++ |++++|++...      . .....+.++.+|+++++++.+++.   
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~-----~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAE-----RGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAAD   79 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHH-----CCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            458999999999999999999998     7888 99999875321      0 012357789999999988777665   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                          ++|.|+|+++......      ......+++|+.++.++++++.+..   ....+++++||...|       +.  
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~-------~~--  150 (260)
T PRK06198         80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH-------GG--  150 (260)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc-------cC--
Confidence                4678999987532111      1235568999999999988876531   112456666543222       11  


Q ss_pred             CCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                         .+        ....  |+.     +.+.....  ....+++++.++|+.+.++
T Consensus       151 ---~~--------~~~~--Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~  193 (260)
T PRK06198        151 ---QP--------FLAA--YCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATE  193 (260)
T ss_pred             ---CC--------Ccch--hHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCc
Confidence               00        0011  443     32222211  1345799999999999884

>PRK07069 short chain dehydrogenase; Validated

Probab=99.21  E-value=2.5e-10  Score=103.36  Aligned_cols=112  Identities=18%  Similarity=0.092  Sum_probs=79.1

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC---CCCCeeEEEecCCChHHHHHHHh----
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN---ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~---~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +||||||+|+||.++++.|++     +|++|++++|++...       ..   ....+..+.+|++|++++.++++    
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAE-----QGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAAD   75 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHH
Confidence            489999999999999999998     899999999873211       00   01124468899999998766654    


Q ss_pred             ---cCCCeeEEEEeccCCC--c----cHHHHHHhHHH----HHHHHHHHHcccCCCcceEEEeccc
Q 016047           93 ---QLTDVTHIFYVTWTNR--S----TEAENCKINGS----MFRNVLRAVIPNAPNLRHVCLQTGT  145 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~----gt~~ll~a~~~~~~~~~~~~~~s~~  145 (396)
                         .+|.|+|+++......  +    +....+++|+.    +++++++++++.+  ..+++++||.
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~ii~~ss~  139 (251)
T PRK07069         76 AMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ--PASIVNISSV  139 (251)
T ss_pred             HcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--CcEEEEecCh
Confidence               4577999977533211  1    23456788888    7788888877643  4677777643

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.3e-10  Score=120.14  Aligned_cols=159  Identities=11%  Similarity=0.073  Sum_probs=105.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      ...+|++|||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|++|.+++.++++  
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  442 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAE-----AGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDI  442 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            33468999999999999999999998     899999999975421      0 012367889999999998877766  


Q ss_pred             -----cCCCeeEEEEeccCC--------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047           93 -----QLTDVTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                           .+|.++|+|+.....        .++....+++|+.|+.++++++...  .....+++++||...|       +.
T Consensus       443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-------~~  515 (657)
T PRK07201        443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQ-------TN  515 (657)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhc-------CC
Confidence                 467899988743211        0134567899999998887766433  1124577777653322       11


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceee
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                           .         +. ...|+.     +.+...+.  ....++.+++++|+.|..
T Consensus       516 -----~---------~~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T  557 (657)
T PRK07201        516 -----A---------PR-FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRT  557 (657)
T ss_pred             -----C---------CC-cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcc
Confidence                 0         00 111553     22222211  134689999999999876

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.20  E-value=1.7e-10  Score=104.99  Aligned_cols=116  Identities=13%  Similarity=0.042  Sum_probs=83.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+|+||||||+|+||.+++++|.+     +|++|++++|+....      . ....++.++.+|++|.+++.+++..   
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~-----~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFAT-----AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999     899999999864321      0 0113577889999999987766543   


Q ss_pred             ----CCCeeEEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           94 ----LTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                          .|.|+|+++......     +.....+++|+.++.++++++...  .....+++++||
T Consensus        85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  146 (255)
T PRK06113         85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS  146 (255)
T ss_pred             HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence                577889887532211     134556899999999999988643  111235666653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.20  E-value=1.5e-10  Score=105.14  Aligned_cols=115  Identities=16%  Similarity=0.135  Sum_probs=82.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----C-CCCCCeeEEEecCCChHHHHHHHhc------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLSQ------   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~~~~~~~~------   93 (396)
                      +|++|||||+|.||.+++++|++     +|++|++++|+....    . ....++.++.+|++|++++.++++.      
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   82 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAK-----AGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMG   82 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            58999999999999999999999     899999998864221    0 0123578899999999988776653      


Q ss_pred             -CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047           94 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  144 (396)
Q Consensus        94 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  144 (396)
                       +|.++|+|+......      ++....+++|+.++..+.+++.+.   ...-.+++++||
T Consensus        83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS  143 (251)
T PRK12481         83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIAS  143 (251)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence             577888876432211      145667899999998888877643   111246676664

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.20  E-value=2.6e-10  Score=103.47  Aligned_cols=157  Identities=10%  Similarity=0.019  Sum_probs=99.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-CCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|++|||||+|+||.+++++|.+     .|++|+++.++. ...      . .....+..+.+|+.+.+++...++    
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLAN-----DGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDN   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHH
Confidence            58999999999999999999998     899998875432 210      0 011346678999999876543332    


Q ss_pred             ---------cCCCeeEEEEeccCC--Cc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccccccc
Q 016047           93 ---------QLTDVTHIFYVTWTN--RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 ---------~~~~V~h~a~~~~~~--~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                               .+|.++|+|+.....  .+    .....+++|+.++..+++++.+.-.+-.+++++||...+       . 
T Consensus        79 ~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-------~-  150 (252)
T PRK12747         79 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR-------I-  150 (252)
T ss_pred             HhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccc-------c-
Confidence                     467788988753211  11    235677899999999998776642222467766643211       1 


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                            +..      .  ...|+.     +.+.+...  ....|+++..+.|+.|.++
T Consensus       151 ------~~~------~--~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~  194 (252)
T PRK12747        151 ------SLP------D--FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTD  194 (252)
T ss_pred             ------CCC------C--chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCc
Confidence                  100      0  112543     32222221  1356899999999999883

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.20  E-value=2.6e-10  Score=104.75  Aligned_cols=114  Identities=15%  Similarity=0.073  Sum_probs=80.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      |+++||||+|.||.+++++|.+     +|++|++++|++...      .  .....+.++.+|++|++++.+++..    
T Consensus         1 k~vlItGas~giG~~la~~la~-----~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAA-----QGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAA   75 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHh
Confidence            4799999999999999999998     899999999875321      0  0112245678999999877665543    


Q ss_pred             ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047           94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  144 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  144 (396)
                         +|.|+|+++......      ++....+++|+.++.++++++...   .....+++++||
T Consensus        76 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS  138 (272)
T PRK07832         76 HGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSS  138 (272)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence               577888876432111      134667899999999999987532   111346776664

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.19  E-value=2.1e-10  Score=104.15  Aligned_cols=104  Identities=17%  Similarity=0.025  Sum_probs=78.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+....      . ....++..+.+|++|++++.++++    
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVE-----AGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999875321      0 012357789999999988776654    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                         .+|.++|+++......      +.....+++|+.++.++++++...
T Consensus        83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  131 (253)
T PRK05867         83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKA  131 (253)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHH
Confidence               5677888877532211      134556789999999998887643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.19  E-value=4e-10  Score=115.94  Aligned_cols=155  Identities=13%  Similarity=0.080  Sum_probs=100.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +|+||||||+|+||++++++|++     +|++|++++|+....      .   .....+..+++|++|++++.++++   
T Consensus       414 gkvvLVTGasggIG~aiA~~La~-----~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAA-----EGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            58999999999999999999999     899999999975321      0   011356789999999998887776   


Q ss_pred             ----cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCC
Q 016047           93 ----QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                          ++|.|+|+|+......  .    .....+++|+.+..+++.++...   ...-.+++++||...      .++.  
T Consensus       489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a------~~~~--  560 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNA------VYAG--  560 (676)
T ss_pred             HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhh------cCCC--
Confidence                4688899987543211  1    24556788999887766544322   111235666653211      1110  


Q ss_pred             CCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCcee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIF  206 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~  206 (396)
                                   + ....|+.     +.+...+..  ...|+++..++|+.|+
T Consensus       561 -------------~-~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~  600 (676)
T TIGR02632       561 -------------K-NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL  600 (676)
T ss_pred             -------------C-CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence                         0 0112654     333332221  2457999999999887

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.19  E-value=3.7e-10  Score=100.96  Aligned_cols=110  Identities=16%  Similarity=0.052  Sum_probs=80.9

Q ss_pred             EEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc---CCCeeE
Q 016047           29 LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH   99 (396)
Q Consensus        29 LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~h   99 (396)
                      |||||+|+||.+++++|++     +|++|++++|++...      .....+++++.+|++|++++.++++.   +|.++|
T Consensus         1 lItGas~~iG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAA-----EGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence            6999999999999999999     899999999975321      00124678999999999999888876   466777


Q ss_pred             EEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccc
Q 016047          100 IFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT  145 (396)
Q Consensus       100 ~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~  145 (396)
                      +++.....      .++....+++|+.++.+++++....  +..+++++||.
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~g~iv~~ss~  125 (230)
T PRK07041         76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA--PGGSLTFVSGF  125 (230)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc--CCeEEEEECch
Confidence            76642211      1135667899999999999854432  35677776643

>PRK08589 short chain dehydrogenase; Validated

Probab=99.19  E-value=3e-10  Score=104.33  Aligned_cols=157  Identities=12%  Similarity=0.002  Sum_probs=100.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+....     . ....++.++.+|+++++++.++++.    
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~-----~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQ-----EGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            357999999999999999999999     899999999973110     0 0123578899999999877665543    


Q ss_pred             ---CCCeeEEEEeccCC---Cc----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCC
Q 016047           94 ---LTDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                         +|.++|+|+.....   ..    .....+++|+.++..+++++... ..+-.+++++||...+       ..     
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----  147 (272)
T PRK08589         80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQ-------AA-----  147 (272)
T ss_pred             cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhc-------CC-----
Confidence               57788887753211   11    23556789999988777766543 1111467766542211       10     


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                      .         +. ...|+.     +.+......  ...|+++..+.|+.|..
T Consensus       148 ~---------~~-~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T  189 (272)
T PRK08589        148 D---------LY-RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIET  189 (272)
T ss_pred             C---------CC-CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence            0         00 112553     222222210  34689999999999876

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.19  E-value=2e-10  Score=105.78  Aligned_cols=157  Identities=14%  Similarity=0.036  Sum_probs=101.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +++++||||+|+||.+++++|++     +|++|++++|+....      .. ...++.++++|+.|++++.++++     
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELAR-----AGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999998     899999999975321      00 11357789999999987766554     


Q ss_pred             --cCCCeeEEEEeccCC---------------------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecccee
Q 016047           93 --QLTDVTHIFYVTWTN---------------------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKH  147 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~---------------------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~  147 (396)
                        .+|.++|+|+.....                     .++....+++|+.++..+++++.+.  ..+..+++++||...
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  164 (278)
T PRK08277         85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA  164 (278)
T ss_pred             cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence              567899987742211                     1134567899999988766655432  112345666664322


Q ss_pred             ecccccccccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          148 YLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       148 y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                      |       .+       .      ....  .|+.     +.+.+.+..  ...++++..++|+.|..+
T Consensus       165 ~-------~~-------~------~~~~--~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~  210 (278)
T PRK08277        165 F-------TP-------L------TKVP--AYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTE  210 (278)
T ss_pred             c-------CC-------C------CCCc--hhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCc
Confidence            2       10       0      0111  1443     222222221  345899999999999884

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.19  E-value=3.7e-10  Score=102.17  Aligned_cols=118  Identities=13%  Similarity=0.075  Sum_probs=81.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCC--ChHHHHHH-
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVS--DPEETQAK-   90 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~--d~~~~~~~-   90 (396)
                      ...+++||||||+|+||.+++++|++     .|++|++++|+....      .  ....++.++.+|+.  +.+++.++ 
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~-----~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~   83 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYAR-----HGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLA   83 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHH-----CCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHH
Confidence            34568999999999999999999998     899999999975321      0  01235677888886  45444332 


Q ss_pred             ------HhcCCCeeEEEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           91 ------LSQLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        91 ------~~~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                            +..+|.|+|+|+.....    .   +.....+++|+.|+.++++++...  ..+..+++++|+
T Consensus        84 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss  152 (247)
T PRK08945         84 DTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS  152 (247)
T ss_pred             HHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence                  33567899988753221    1   134667899999988888877532  123556776664

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.18  E-value=3.9e-10  Score=103.15  Aligned_cols=158  Identities=16%  Similarity=0.085  Sum_probs=103.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+|++|||||+|.||.+++++|++     .|++|+++.|++...      .. ...++.++++|++|++++..++..   
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAK-----AGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            357999999999999999999998     899999998875321      10 113578899999999988776654   


Q ss_pred             ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          +|.++|+++......      +.....+++|+.|+..+++++...  ..+..+++++||..      ..++.    
T Consensus        84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~------~~~~~----  153 (265)
T PRK07097         84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM------SELGR----  153 (265)
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc------ccCCC----
Confidence                677888887533211      134566789999988887776543  11245666665321      11211    


Q ss_pred             CCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                           +     ....  |+.     +.+...+.  ....|+.+..++|+.+..+
T Consensus       154 -----~-----~~~~--Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~  195 (265)
T PRK07097        154 -----E-----TVSA--YAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATP  195 (265)
T ss_pred             -----C-----CCcc--HHHHHHHHHHHHHHHHHHhhhcCceEEEEEecccccc
Confidence                 0     1111  443     32222222  1345899999999999884

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.18  E-value=3e-10  Score=102.60  Aligned_cols=115  Identities=19%  Similarity=0.200  Sum_probs=79.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-----NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-----~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|.+|||||+|+||++++++|++     .|++|+++.++....   .     .....+..+.+|+.|.+++.++++    
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHK-----DGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKA   77 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----cCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999     899988865432111   0     011346678999999988876664    


Q ss_pred             ---cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                         .+|.|+|+++.....      .++....+++|+.++.++++++...  .....+++++||
T Consensus        78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS  140 (246)
T PRK12938         78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS  140 (246)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEec
Confidence               467899998753211      1134667899999977766655442  122456776664

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.18  E-value=3.4e-10  Score=102.87  Aligned_cols=116  Identities=11%  Similarity=0.028  Sum_probs=83.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CC-CCCCeeEEEecCCChHHHHHHHh-------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN-ADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      +|++|||||+|.||.+++++|.+     .|++|++++|.....    .. ...++..+++|++|.+++.++++       
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~-----~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAE-----AGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999     899999888754211    00 12357789999999988877665       


Q ss_pred             cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccc
Q 016047           93 QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGT  145 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~  145 (396)
                      .+|.++|+|+.....      .++....+++|+.++.++++++...-   ..-.+++++||.
T Consensus        85 ~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~  146 (253)
T PRK08993         85 HIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASM  146 (253)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECch
Confidence            367788988743211      11456778999999999988876531   112356666543

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.18  E-value=3.8e-10  Score=105.84  Aligned_cols=121  Identities=11%  Similarity=0.072  Sum_probs=85.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      +|++++|||||++.||.+++++|++     +| ++|++++|+....      . .....+.++.+|++|.+++++++.  
T Consensus         1 ~~~k~vlITGas~GIG~aia~~L~~-----~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   75 (314)
T TIGR01289         1 QQKPTVIITGASSGLGLYAAKALAA-----TGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQF   75 (314)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHH-----cCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            4788999999999999999999998     89 9999999875321      1 012357788999999988766553  


Q ss_pred             -----cCCCeeEEEEeccCC----C---ccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceee
Q 016047           93 -----QLTDVTHIFYVTWTN----R---STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHY  148 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~----~---~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y  148 (396)
                           .+|.++|+|+.....    .   +.....+++|+.|+..+++++...    +....+++.+||...+
T Consensus        76 ~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~  147 (314)
T TIGR01289        76 RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN  147 (314)
T ss_pred             HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence                 366688887642211    1   134556899999987776655442    1113578878776554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR02415 23BDH acetoin reductases

Probab=99.17  E-value=2.6e-10  Score=103.48  Aligned_cols=114  Identities=16%  Similarity=0.071  Sum_probs=80.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ-----   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~-----   93 (396)
                      |++|||||+|+||.+++++|++     .|++|+++.|++...      . ....++.++.+|++|++++.+++..     
T Consensus         1 k~~lItG~sg~iG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   75 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAK-----DGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF   75 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999998     899999999875321      0 0123578899999999988776543     


Q ss_pred             --CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047           94 --LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  144 (396)
Q Consensus        94 --~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  144 (396)
                        +|.|+|+++......      ......+++|+.++..+++++.+.   .....+++++||
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  137 (254)
T TIGR02415        76 GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAAS  137 (254)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence              577999887532211      133567899999988777766543   111246666553

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06484 short chain dehydrogenase; Validated

Probab=99.17  E-value=2.6e-10  Score=114.64  Aligned_cols=160  Identities=12%  Similarity=-0.002  Sum_probs=105.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      ...+|++|||||+|.||.+++++|.+     +|++|++++|+....  .  ....++..+.+|++|++++.++++.    
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAA-----AGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999     899999999975321  0  0113566789999999887766653    


Q ss_pred             ---CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047           94 ---LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                         +|.++|+|+......       ++....+++|+.|+.++++++...-.+-.+++++||...+      .+      .
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~------~  408 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASL------LA------L  408 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhc------CC------C
Confidence               577888877532111       1346678999999999998877652223466666542111      00      0


Q ss_pred             CccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          164 PFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                               +. ...|+.     +.+.+...  ....|+++..+.|+.|..+
T Consensus       409 ---------~~-~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~  450 (520)
T PRK06484        409 ---------PP-RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETP  450 (520)
T ss_pred             ---------CC-CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence                     10 112543     22222211  1346899999999999773

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.17  E-value=1.7e-10  Score=103.59  Aligned_cols=104  Identities=18%  Similarity=0.039  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--CCCCeeEEEecCCChHHHHHHHhc-------C
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLSQ-------L   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~-------~   94 (396)
                      |+|++|||||+|.||.+++++|.+     +|++|++++|++.....  ...+++++.+|++|++++.+++..       +
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLA-----QGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            678999999999999999999998     89999999997643210  112467899999999877665543       5


Q ss_pred             CCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc
Q 016047           95 TDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        95 ~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      |.++|+|+.....  .    ++....+++|+.++..+.+++...
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~  119 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDL  119 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHH
Confidence            6788887642211  1    134567899999998777766553

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.17  E-value=5.1e-10  Score=102.36  Aligned_cols=116  Identities=16%  Similarity=0.077  Sum_probs=80.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      +++++|||||+|.||.+++++|++     +|++|++++|++...      .   ....++..+.+|++|.+++.++++  
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLE-----AGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999998     899999999975321      0   011357789999999988766554  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                           .+|.++|+|+......      ......+++|+.+..++++++...  ..+..+++++||
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  146 (265)
T PRK07062         82 EARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNS  146 (265)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecc
Confidence                 3577888877432111      134556788888877666655432  112346666654

>PRK05855 short chain dehydrogenase; Validated

Probab=99.16  E-value=3.3e-10  Score=115.42  Aligned_cols=155  Identities=12%  Similarity=0.006  Sum_probs=103.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      .+++|||||+|+||++++++|.+     +|++|++++|+....      . ....++.++.+|++|++++.++++.    
T Consensus       315 ~~~~lv~G~s~giG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        315 GKLVVVTGAGSGIGRETALAFAR-----EGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             CCEEEEECCcCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            47999999999999999999998     899999999975321      0 0123578899999999988776654    


Q ss_pred             ---CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCC
Q 016047           94 ---LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         +|.++|+|+......      .+....+++|+.|+.++++++...   ...-.+++++||...|..           
T Consensus       390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------  458 (582)
T PRK05855        390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP-----------  458 (582)
T ss_pred             cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-----------
Confidence               577888887543211      134567889999999988876543   111246777665433311           


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                       .         + ....|+..|.        +.... ...|+++++++|+.|-.
T Consensus       459 -~---------~-~~~~Y~~sKaa~~~~~~~l~~e~-~~~gi~v~~v~Pg~v~t  500 (582)
T PRK05855        459 -S---------R-SLPAYATSKAAVLMLSECLRAEL-AAAGIGVTAICPGFVDT  500 (582)
T ss_pred             -C---------C-CCcHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEEeCCCcc
Confidence             0         0 0112553322        22222 45689999999998755

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.16  E-value=4.1e-10  Score=106.14  Aligned_cols=116  Identities=16%  Similarity=0.086  Sum_probs=82.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+++||||||+|.||.+++++|.+     +|++|++++|+....      . .....+.++.+|++|+++++++++    
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~-----~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFAR-----RGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            357999999999999999999999     899999999975321      0 012356788999999998877663    


Q ss_pred             ---cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 ---QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                         .+|.++|+|+.....  .    +.....+++|+.|+.++.+++...  ..+..+++.++|
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS  143 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMIS  143 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence               467788887743221  1    133557899999999887776432  111235555543

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.16  E-value=4.8e-10  Score=102.50  Aligned_cols=155  Identities=13%  Similarity=0.074  Sum_probs=100.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      +|++|||||+|.||.+++++|++     +|++|++++|+....      .  ....++.++.+|++|+++++++++.   
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLAR-----AGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN   82 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh
Confidence            57999999999999999999999     899999999975321      0  0123678999999999888776653   


Q ss_pred             ---CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           94 ---LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                         +|.++|+++.....      .++....+++|+.+...+++++...  ..+..+++++||...+       .      
T Consensus        83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~-------~------  149 (263)
T PRK08339         83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK-------E------  149 (263)
T ss_pred             hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc-------C------
Confidence               56677877642211      1145567889988876666555432  1123467766643211       0      


Q ss_pred             CCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                       +       .+. ...|..        .+.+...+ ...|+++..+.|+.|-.
T Consensus       150 -~-------~~~-~~~y~asKaal~~l~~~la~el-~~~gIrVn~v~PG~v~T  192 (263)
T PRK08339        150 -P-------IPN-IALSNVVRISMAGLVRTLAKEL-GPKGITVNGIMPGIIRT  192 (263)
T ss_pred             -C-------CCc-chhhHHHHHHHHHHHHHHHHHh-cccCeEEEEEEeCcCcc
Confidence             0       010 011331        33333333 45689999999998865

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.16  E-value=4.1e-10  Score=95.87  Aligned_cols=112  Identities=22%  Similarity=0.093  Sum_probs=81.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCC----------CCCCeeEEEecCCChHHHHHHHhc-
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWN----------ADHLVEYVQCDVSDPEETQAKLSQ-   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~----------~~~~v~~~~~Dl~d~~~~~~~~~~-   93 (396)
                      ++++||||+|+||.+++++|.+     +|+ .|+++.|++.....          ...++.++.+|+++++.+.+.+.. 
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~-----~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   75 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAE-----RGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAI   75 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHH-----hhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            4799999999999999999998     675 68888886543210          123567899999999877766544 


Q ss_pred             ------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047           94 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        94 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                            +|.|+|+++......      ++....+++|+.++.++++++.+.+  ..+++++|+
T Consensus        76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~ii~~ss  136 (180)
T smart00822       76 PARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP--LDFFVLFSS  136 (180)
T ss_pred             HHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC--cceEEEEcc
Confidence                  477888887432211      1345678999999999999997643  456666653

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.15  E-value=3e-10  Score=101.18  Aligned_cols=113  Identities=15%  Similarity=0.113  Sum_probs=81.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHh----cCCCeeE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS----QLTDVTH   99 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~----~~~~V~h   99 (396)
                      ++++||||+|.||++++++|.+     +|++|++++|+....  .....+++++++|++|+++++++++    .+|.++|
T Consensus         1 m~vlItGas~giG~~ia~~l~~-----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRN-----DGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            3799999999999999999998     899999999975321  1011246789999999998887765    4677889


Q ss_pred             EEEeccC---C--------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047          100 IFYVTWT---N--------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus       100 ~a~~~~~---~--------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                      +++..+.   .        .++....+++|+.++.++++++...-.+-.+++.+|
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~is  130 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVV  130 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Confidence            8763211   0        113456789999999999998876411123555554

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.15  E-value=8e-10  Score=96.55  Aligned_cols=102  Identities=16%  Similarity=0.120  Sum_probs=75.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh---cCCCeeEEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---QLTDVTHIFY  102 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~~~V~h~a~  102 (396)
                      |++|||||+|.||.+++++|.+     + ++|++++|++.          .+++|++|+++++++++   .+|.++|+++
T Consensus         1 ~~vlItGas~giG~~la~~l~~-----~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag   64 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSK-----R-HEVITAGRSSG----------DVQVDITDPASIRALFEKVGKVDAVVSAAG   64 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHh-----c-CcEEEEecCCC----------ceEecCCChHHHHHHHHhcCCCCEEEECCC
Confidence            4799999999999999999998     6 78999998642          46899999998888776   4667888876


Q ss_pred             eccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047          103 VTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus       103 ~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                      ......      .+....+++|+.++.++++++.+.-.+-..++++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  111 (199)
T PRK07578         65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS  111 (199)
T ss_pred             CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence            422111      13455678999999999998876421223455554

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.15  E-value=3.8e-10  Score=102.27  Aligned_cols=114  Identities=11%  Similarity=0.092  Sum_probs=76.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcCC-----
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLT-----   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~-----   95 (396)
                      |+||||||+|+||++++++|++     +|++|++++|.+...     .....+++++.+|++|++++..+++.+.     
T Consensus         2 k~vlItGasggiG~~ia~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLE-----KGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHh-----cCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            5899999999999999999999     899999999976221     0112467899999999988877665431     


Q ss_pred             ------CeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecc
Q 016047           96 ------DVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTG  144 (396)
Q Consensus        96 ------~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~  144 (396)
                            .++|+++......       ......+++|+.+...+++++...-   ....+++++||
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISS  141 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecc
Confidence                  2455555322111       1345567889988666665544331   11245666653

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.14  E-value=5.1e-10  Score=104.13  Aligned_cols=116  Identities=19%  Similarity=0.075  Sum_probs=83.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .+++||||||+|.||.+++++|.+     .|++|++++|+....      ......+..+.+|++|++++.++++     
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHA-----RGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999998     899999999975321      1112345566799999988776654     


Q ss_pred             --cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecc
Q 016047           93 --QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG  144 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~  144 (396)
                        .+|.|+|+|+.....  .    ++....+++|+.|+.++++++... ..+..+++++||
T Consensus        83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS  143 (296)
T PRK05872         83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS  143 (296)
T ss_pred             cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence              467788888753211  1    134567899999999999987653 111246776664

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.14  E-value=2.5e-10  Score=104.32  Aligned_cols=103  Identities=14%  Similarity=0.093  Sum_probs=77.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +++++||||+|+||.+++++|++     .|++|++++|+....  .  ....++.++++|+.|.+++.++++       .
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVA-----EGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999     899999999975321  0  012357889999999987766554       4


Q ss_pred             CCCeeEEEEeccCC-----Cc------cHHHHHHhHHHHHHHHHHHHccc
Q 016047           94 LTDVTHIFYVTWTN-----RS------TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        94 ~~~V~h~a~~~~~~-----~~------~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      +|.++|+|+.....     .+      .....+++|+.++.++++++.+.
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  129 (262)
T TIGR03325        80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPA  129 (262)
T ss_pred             CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHH
Confidence            57788888742110     01      23467899999999999988764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.13  E-value=5.5e-10  Score=102.77  Aligned_cols=101  Identities=20%  Similarity=0.145  Sum_probs=77.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      |+|.++|||| |+||.+++++|.      +|++|++++|+....      .. ...++.++.+|++|++++.++++    
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~   73 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG------AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQT   73 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence            7789999998 789999999994      589999999975321      00 11357789999999988877665    


Q ss_pred             --cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 --QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                        .+|.++|+|+... ...+....+++|+.|+.++++++.+.
T Consensus        74 ~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~  114 (275)
T PRK06940         74 LGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKV  114 (275)
T ss_pred             cCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHH
Confidence              3667888876432 22356788999999999999988764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.12  E-value=1.5e-09  Score=99.12  Aligned_cols=116  Identities=13%  Similarity=-0.043  Sum_probs=78.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      ..+|++|||||+|.||.+++++|++     +|++|+++.|+....       . ....++.++.+|++|.+++.+++.  
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~-----~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~   79 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGK-----EKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTA   79 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            3468999999999999999999999     899998888854211       0 012356789999999988776654  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHH----cccCCCcceEEEecc
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAV----IPNAPNLRHVCLQTG  144 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~~~~~~s~  144 (396)
                           .+|.++|+++......      +.....+++|+.++.++++++    .+.+ .-.+++++||
T Consensus        80 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~g~iv~~sS  145 (261)
T PRK08936         80 VKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHD-IKGNIINMSS  145 (261)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCcEEEEEcc
Confidence                 3577888877432211      134456799988876655544    3322 1245665553

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.10  E-value=1.4e-09  Score=99.39  Aligned_cols=105  Identities=15%  Similarity=0.037  Sum_probs=77.6

Q ss_pred             CCCCEEEEEcCCC-hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh
Q 016047           23 SYQSVALIVGVTG-IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        23 ~~~~~iLVtGatG-fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ..++++|||||+| -||..+++.|++     +|++|++++|+....      .   ....++.++++|+++++++.++++
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   89 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALE-----EGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID   89 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence            3468999999998 599999999998     899999998865321      0   111357889999999988776664


Q ss_pred             -------cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 -------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                             .+|.|+|+++.....  .    ......+++|+.++.++++++...
T Consensus        90 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  142 (262)
T PRK07831         90 AAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRY  142 (262)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence                   357789988743211  1    134556789999999988877653

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.09  E-value=7.1e-10  Score=101.32  Aligned_cols=115  Identities=17%  Similarity=0.074  Sum_probs=81.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|++|||||+|+||.+++++|++     .|++|++++|++...  .  ....++.++++|++|++++.++++       .
T Consensus         6 ~k~vlVtGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          6 GQVALITGGGSGIGRALVERFLA-----EGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999     899999999975321  0  012357889999999988776654       3


Q ss_pred             CCCeeEEEEeccC--CC-c-c-------HHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecc
Q 016047           94 LTDVTHIFYVTWT--NR-S-T-------EAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  144 (396)
Q Consensus        94 ~~~V~h~a~~~~~--~~-~-~-------~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  144 (396)
                      +|.++|+|+....  .. . +       ....+++|+.++.++++++...- .+-.++++++|
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS  143 (263)
T PRK06200         81 LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLS  143 (263)
T ss_pred             CCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECC
Confidence            6778888774321  10 1 1       34567899999998888876541 11235665554

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.09  E-value=1.5e-09  Score=102.11  Aligned_cols=160  Identities=18%  Similarity=0.190  Sum_probs=94.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC----CCCCeeEEEecCCChHHHHHHHhcCCC--
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN----ADHLVEYVQCDVSDPEETQAKLSQLTD--   96 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~----~~~~v~~~~~Dl~d~~~~~~~~~~~~~--   96 (396)
                      ..+|||+||||.+|+.+++.|++     +|+.|++++|+....  ..    .+.....+..|...+.+....+.....  
T Consensus        79 ~~~VlVvGatG~vG~~iv~~llk-----rgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~  153 (411)
T KOG1203|consen   79 PTTVLVVGATGKVGRRIVKILLK-----RGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG  153 (411)
T ss_pred             CCeEEEecCCCchhHHHHHHHHH-----CCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence            47999999999999999999999     899999999986432  11    234555666666555443332322221  


Q ss_pred             eeEEEEeccCCCcc--HHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           97 VTHIFYVTWTNRST--EAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        97 V~h~a~~~~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      +..+..++......  -..-..+...|++|+++||+.++  ++|++++++          +|..     ......+..-.
T Consensus       154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG--vk~~vlv~s----------i~~~-----~~~~~~~~~~~  216 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG--VKRVVLVGS----------IGGT-----KFNQPPNILLL  216 (411)
T ss_pred             ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC--CceEEEEEe----------ecCc-----ccCCCchhhhh
Confidence            11111111111111  12234678899999999998876  899998763          2211     00000000000


Q ss_pred             CCcchhHHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          175 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       175 ~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      ....+.....+.++. ++.|++++|+||+...-
T Consensus       217 ~~~~~~~k~~~e~~~-~~Sgl~ytiIR~g~~~~  248 (411)
T KOG1203|consen  217 NGLVLKAKLKAEKFL-QDSGLPYTIIRPGGLEQ  248 (411)
T ss_pred             hhhhhHHHHhHHHHH-HhcCCCcEEEecccccc
Confidence            001112244445554 78899999999886655

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.08  E-value=5.6e-10  Score=100.76  Aligned_cols=103  Identities=17%  Similarity=0.148  Sum_probs=80.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ++++|||||+|+||.+++++|++     +|++|++++|+.....  ........+.+|++|.+++.+.+..+|.++|+|+
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG   88 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRA-----KGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHG   88 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCc
Confidence            47999999999999999999998     8999999998752211  0111235789999999999988888999999987


Q ss_pred             eccCC---CccHHHHHHhHHHHHHHHHHHHccc
Q 016047          103 VTWTN---RSTEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus       103 ~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      .....   .++....+++|+.|+.++++++...
T Consensus        89 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  121 (245)
T PRK12367         89 INPGGRQDPENINKALEINALSSWRLLELFEDI  121 (245)
T ss_pred             cCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            53221   1245677899999999999987654

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.06  E-value=7.7e-10  Score=99.50  Aligned_cols=112  Identities=16%  Similarity=0.126  Sum_probs=77.9

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHhc------
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ------   93 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~~------   93 (396)
                      ||||||+|+||.+++++|.+     +|++|++++|+....       . ....++.++.+|++|.+++.++++.      
T Consensus         1 vlItGas~giG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   75 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAA-----DGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHG   75 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            69999999999999999998     899999998764221       0 0124688999999999887766543      


Q ss_pred             -CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHc-cc--CCCcceEEEecc
Q 016047           94 -LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVI-PN--APNLRHVCLQTG  144 (396)
Q Consensus        94 -~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~-~~--~~~~~~~~~~s~  144 (396)
                       .|.++|+++.....      ..+....+++|+.++.++++++. ..  ..+..+++++||
T Consensus        76 ~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS  136 (239)
T TIGR01831        76 AYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLAS  136 (239)
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence             45577776532211      11456678999999999988763 11  112346666654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.05  E-value=1.9e-09  Score=100.74  Aligned_cols=103  Identities=15%  Similarity=-0.029  Sum_probs=77.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|.....       . ....++.++.+|++|++++.++++   
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~-----~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLAR-----LGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999988754211       0 012357789999999987776654   


Q ss_pred             ---cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHcc
Q 016047           93 ---QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                         .+|.++|+|+.....    .  .+....+++|+.|+.++++++..
T Consensus        86 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~  133 (306)
T PRK07792         86 GLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA  133 (306)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence               467889988753321    1  14566789999999999988753

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.04  E-value=2.6e-09  Score=97.48  Aligned_cols=116  Identities=7%  Similarity=-0.038  Sum_probs=77.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCeeEEEecCCChHHHHHHHhc-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLSQ-   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~~~~~~~~-   93 (396)
                      .+|+||||||++.||.+++++|++     .|++|+++.|+....       .  ....++.++.+|++|++++++++.. 
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQ-----SGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            358999999999999999999999     899998887643211       0  0123578999999999887766653 


Q ss_pred             ------CCCeeEEEEeccC-------C--C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           94 ------LTDVTHIFYVTWT-------N--R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        94 ------~~~V~h~a~~~~~-------~--~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                            +|.++|+|+....       .  .   ......+++|+.+...+.+++...  ..+-.+++++||
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  152 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSS  152 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEec
Confidence                  5668888763211       0  0   123446778888766655544432  111346776664

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.04  E-value=8.7e-10  Score=105.80  Aligned_cols=104  Identities=12%  Similarity=0.105  Sum_probs=81.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---C-CCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---W-NADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ++|+|+||||+|+||++++++|.+     +|++|++++|++...   . ....++..+.+|++|++++.+.+.++|.++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~-----~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQ-----QGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence            358999999999999999999998     899999999875321   0 0112466889999999999999999999999


Q ss_pred             EEEeccCCCc---cHHHHHHhHHHHHHHHHHHHccc
Q 016047          100 IFYVTWTNRS---TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus       100 ~a~~~~~~~~---~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      +|+.......   +....+++|+.|+.++++++.+.
T Consensus       252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~  287 (406)
T PRK07424        252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTT  287 (406)
T ss_pred             CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8874322111   34677899999999999987653

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.02  E-value=1.3e-08  Score=91.35  Aligned_cols=103  Identities=21%  Similarity=0.182  Sum_probs=72.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHH---HhcCCCeeEEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK---LSQLTDVTHIFY  102 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~---~~~~~~V~h~a~  102 (396)
                      |+|+||||+|+||++++++|++..   .++.|....|..... ....++.++++|+++.++++..   +..+|.|+|+++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~---~~~~v~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG   76 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERY---PDATVHATYRHHKPD-FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVG   76 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhC---CCCEEEEEccCCccc-cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCc
Confidence            489999999999999999999821   145676666654332 1235788999999999876654   345777888887


Q ss_pred             eccCCC------------ccHHHHHHhHHHHHHHHHHHHccc
Q 016047          103 VTWTNR------------STEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus       103 ~~~~~~------------~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      ......            +.....+++|+.++..+.+++...
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~  118 (235)
T PRK09009         77 MLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK  118 (235)
T ss_pred             cccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence            543210            013456789999988888777654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.02  E-value=4.1e-09  Score=96.08  Aligned_cols=114  Identities=11%  Similarity=-0.009  Sum_probs=75.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      |+||||||+|.||..++++|.+     +|++|++++|++...      .....++.++.+|++|+++++++++       
T Consensus         1 m~vlItGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g   75 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLK-----KGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG   75 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4899999999999999999999     899999999975321      1111357789999999988876664       


Q ss_pred             cCCCeeEEEEeccCC----Cc----cHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEecc
Q 016047           93 QLTDVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTG  144 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~  144 (396)
                      .+|.++|+|+.....    .+    +....+.+|+.++..+..++...   ...-.+++++||
T Consensus        76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS  138 (259)
T PRK08340         76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSS  138 (259)
T ss_pred             CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence            467788887743211    11    22344577877755444332111   112346676654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.01  E-value=3.1e-09  Score=104.84  Aligned_cols=116  Identities=15%  Similarity=0.076  Sum_probs=83.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .++++|||||+|.||..++++|.+     +|++|++++|.....    .....+...+.+|++|++++.++++       
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~-----~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLAR-----DGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            468999999999999999999998     899999998853211    0011234688999999987766554       


Q ss_pred             cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047           93 QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  144 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  144 (396)
                      .+|.|+|+++.....      .+.....+++|+.|+.++.+++....  .+-.+++++||
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS  343 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS  343 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence            467799988743221      11345678999999999999887631  12246666653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.00  E-value=3.8e-09  Score=96.73  Aligned_cols=102  Identities=17%  Similarity=0.139  Sum_probs=71.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CC--CCCCeeEEEecCCChHHH----HHHH-
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WN--ADHLVEYVQCDVSDPEET----QAKL-   91 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~--~~~~v~~~~~Dl~d~~~~----~~~~-   91 (396)
                      +.++||||+|+||.+++++|++     +|++|+++.|+....       +.  ....+.++.+|++|.+++    ++.+ 
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~   76 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQ-----EGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIID   76 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHh-----CCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHH
Confidence            5799999999999999999999     899999887653211       10  112456789999998744    2222 


Q ss_pred             ------hcCCCeeEEEEeccCC----Cc-------------cHHHHHHhHHHHHHHHHHHHccc
Q 016047           92 ------SQLTDVTHIFYVTWTN----RS-------------TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        92 ------~~~~~V~h~a~~~~~~----~~-------------~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                            ..+|.|+|+|+.....    .+             .....+++|+.++..+++++...
T Consensus        77 ~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~  140 (267)
T TIGR02685        77 ACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQR  140 (267)
T ss_pred             HHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence                  3467788888743211    01             13456899999999998876543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.98  E-value=5.4e-09  Score=98.22  Aligned_cols=116  Identities=22%  Similarity=0.186  Sum_probs=79.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCC--hHH---HHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSD--PEE---TQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d--~~~---~~~   89 (396)
                      .++.++||||||.||.+++++|.+     +|++|++++|++...      .   .....+..+.+|+++  .+.   +.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~-----~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~  126 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLAR-----KGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKE  126 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHH
Confidence            368999999999999999999999     899999999986421      0   011356778899985  232   334


Q ss_pred             HHhcCC--CeeEEEEeccCC----Cc----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           90 KLSQLT--DVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        90 ~~~~~~--~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      .+.+.|  .++|+|+.....    .+    +....+++|+.|+.++++++...  ..+..+++++||
T Consensus       127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS  193 (320)
T PLN02780        127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGS  193 (320)
T ss_pred             HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence            444444  688888754221    11    23457899999999988877543  112456776664

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.95  E-value=9e-09  Score=93.44  Aligned_cols=115  Identities=15%  Similarity=0.092  Sum_probs=79.7

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .+|++|||||+  +-||..++++|++     .|++|++..|+....    ......+.++++|++|+++++++++     
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKD-----QGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHH-----CCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            35899999999  7999999999999     899999998863110    0112357789999999987766543     


Q ss_pred             --cCCCeeEEEEeccC-----C-C----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           93 --QLTDVTHIFYVTWT-----N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        93 --~~~~V~h~a~~~~~-----~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                        .+|.++|+|+....     . .    ++....+++|+.++..+++++...-.+-.+++++|
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~is  143 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLT  143 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEe
Confidence              35778888774321     0 1    13456789999999888887765421123455554

>PRK06484 short chain dehydrogenase; Validated

Probab=98.92  E-value=9.6e-09  Score=103.36  Aligned_cols=116  Identities=16%  Similarity=0.053  Sum_probs=83.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--C--CCCCeeEEEecCCChHHHHHHHhc------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N--ADHLVEYVQCDVSDPEETQAKLSQ------   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~~~~v~~~~~Dl~d~~~~~~~~~~------   93 (396)
                      .+|++|||||++.||.+++++|.+     .|++|++++|+.....  .  ...++.++.+|++|++++.++++.      
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFAR-----AGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFG   78 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999     8999999999754310  0  113567799999999887766543      


Q ss_pred             -CCCeeEEEEeccC------CC--ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecc
Q 016047           94 -LTDVTHIFYVTWT------NR--STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTG  144 (396)
Q Consensus        94 -~~~V~h~a~~~~~------~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~  144 (396)
                       +|.++|+|+....      ..  ++....+++|+.++..+++++...-   ..-.+++++||
T Consensus        79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS  141 (520)
T PRK06484         79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS  141 (520)
T ss_pred             CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence             6778888764211      11  1356678999999999988887641   11125666653

>PRK06125 short chain dehydrogenase; Provisional

Probab=98.91  E-value=3.2e-08  Score=90.17  Aligned_cols=114  Identities=15%  Similarity=0.072  Sum_probs=80.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHhc---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      +++||||||+|.||.++++.|++     .|++|++++|++...      ..  ...++.++.+|++|++++.++++.   
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   81 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAA-----EGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGD   81 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCC
Confidence            58999999999999999999998     899999999975321      00  123578899999999988776654   


Q ss_pred             CCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEec
Q 016047           94 LTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQT  143 (396)
Q Consensus        94 ~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s  143 (396)
                      +|.++|+++.....    .  ++....+++|+.+..++++++...  ..+-.+++++|
T Consensus        82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~is  139 (259)
T PRK06125         82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVI  139 (259)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            56678876642111    1  134567899999998888876433  11123566555

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.89  E-value=1.1e-08  Score=83.68  Aligned_cols=150  Identities=18%  Similarity=0.240  Sum_probs=98.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  105 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~  105 (396)
                      +..+|.||||-.|+.|++++++.+..+   +|+++.|+.........++.....|...-+++...+++.|..|.+-+.+.
T Consensus        19 ~s~fvlGAtG~~G~~llk~~~E~~~FS---KV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTR   95 (238)
T KOG4039|consen   19 MSGFVLGATGLCGGGLLKHAQEAPQFS---KVYAILRRELPDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTR   95 (238)
T ss_pred             cceEEEeccccccHHHHHHHHhcccce---eEEEEEeccCCCccccceeeeEEechHHHHHHHhhhcCCceEEEeecccc
Confidence            689999999999999999999976554   79999998533222346788889999888889999999997666655432


Q ss_pred             CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh-----
Q 016047          106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT-----  180 (396)
Q Consensus       106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~-----  180 (396)
                      .... .+...++.-.-...+.++|++.+  +++|+++||.....|                        +++.|-     
T Consensus        96 gkaG-adgfykvDhDyvl~~A~~AKe~G--ck~fvLvSS~GAd~s------------------------SrFlY~k~KGE  148 (238)
T KOG4039|consen   96 GKAG-ADGFYKVDHDYVLQLAQAAKEKG--CKTFVLVSSAGADPS------------------------SRFLYMKMKGE  148 (238)
T ss_pred             cccc-cCceEeechHHHHHHHHHHHhCC--CeEEEEEeccCCCcc------------------------cceeeeeccch
Confidence            2211 11222222222223455666544  899998875433322                        233333     


Q ss_pred             HHHHHHHHhhcCCCe-eEEEEcCCceeecCC
Q 016047          181 LEDILFEEVEKKEEL-SWSVHRPDTIFGFSP  210 (396)
Q Consensus       181 ~e~~l~~~~~~~~~~-~~~ilRp~~v~G~~~  210 (396)
                      .|+-+.+     .++ .++|+||+.+.|..+
T Consensus       149 vE~~v~e-----L~F~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  149 VERDVIE-----LDFKHIIILRPGPLLGERT  174 (238)
T ss_pred             hhhhhhh-----ccccEEEEecCcceecccc
Confidence            2444444     233 689999999999543

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.89  E-value=2.8e-08  Score=89.69  Aligned_cols=120  Identities=21%  Similarity=0.143  Sum_probs=83.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHH---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL---   91 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~---   91 (396)
                      .+|.|+||||+.-||.+++.+|.+     .|.+++.+.|+....         .....++.++++|++|.+++.+++   
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~-----~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAK-----RGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHh-----CCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            368999999999999999999999     899877777764221         111126899999999999887665   


Q ss_pred             ----hcCCCeeEEEEeccCCC-c-----cHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceee
Q 016047           92 ----SQLTDVTHIFYVTWTNR-S-----TEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHY  148 (396)
Q Consensus        92 ----~~~~~V~h~a~~~~~~~-~-----~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y  148 (396)
                          .++|..++.|+...... +     +....+++|+.|+..+..++-..-  .+--|++.++|+..+
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~  154 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK  154 (282)
T ss_pred             HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence                33555555555433111 1     334578999999998888777651  123577777754433

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.86  E-value=4.1e-08  Score=89.35  Aligned_cols=116  Identities=10%  Similarity=0.049  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCC---------C----C----C-CCCCCeeEEEecCCC
Q 016047           24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPK---------P----N----W-NADHLVEYVQCDVSD   83 (396)
Q Consensus        24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~---------~----~----~-~~~~~v~~~~~Dl~d   83 (396)
                      .+|+||||||+|  .||.+++++|++     +|++|+++.|...         .    .    . ....++.++++|++|
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~-----~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~   79 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAE-----AGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ   79 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            458999999995  799999999999     8999988754210         0    0    0 011356788999999


Q ss_pred             hHHHHHHHhc-------CCCeeEEEEeccCC---Cc---cHHHHHHhHHHHHHHHHHHHccc-C-CCcceEEEecc
Q 016047           84 PEETQAKLSQ-------LTDVTHIFYVTWTN---RS---TEAENCKINGSMFRNVLRAVIPN-A-PNLRHVCLQTG  144 (396)
Q Consensus        84 ~~~~~~~~~~-------~~~V~h~a~~~~~~---~~---~~~~~~~~nv~gt~~ll~a~~~~-~-~~~~~~~~~s~  144 (396)
                      .+++.+++..       .|.|+|.|+.....   ..   .....+++|+.+...+..++... . ..-.+++++||
T Consensus        80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  155 (256)
T PRK12859         80 NDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTS  155 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence            9887766643       46677777643211   11   34456899999988876554332 1 11346776653

>PRK07791 short chain dehydrogenase; Provisional

Probab=98.86  E-value=2.2e-08  Score=92.63  Aligned_cols=102  Identities=12%  Similarity=-0.021  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC---------CCC------C-CCCCCeeEEEecCCChHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP---------KPN------W-NADHLVEYVQCDVSDPEET   87 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~---------~~~------~-~~~~~v~~~~~Dl~d~~~~   87 (396)
                      .+|++|||||++.||.+++++|++     .|++|++++|+.         ...      . ....++.++.+|++|++++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~-----~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   79 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAA-----EGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGA   79 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHH
Confidence            458999999999999999999998     899999888754         110      0 0113567889999999877


Q ss_pred             HHHHh-------cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHc
Q 016047           88 QAKLS-------QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVI  130 (396)
Q Consensus        88 ~~~~~-------~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~  130 (396)
                      .++++       .+|.++|+|+.....  .    ++....+++|+.++.++++++.
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  135 (286)
T PRK07791         80 ANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAA  135 (286)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHH
Confidence            66553       356788887653211  1    1456678999999988887765

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.85  E-value=8.5e-08  Score=87.31  Aligned_cols=115  Identities=15%  Similarity=0.057  Sum_probs=78.2

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      .+|.++||||+  +-||.+++++|.+     +|++|+++.|+....        .....++.++++|++|++++.++++ 
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHN-----AGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            35899999997  8999999999999     899999887753110        0012357789999999988766554 


Q ss_pred             ------cCCCeeEEEEeccC-----C-Cc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           93 ------QLTDVTHIFYVTWT-----N-RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~-----~-~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                            .+|.++|+|+....     . .+    .....+++|+.++..+++++...-.+-.+++++|
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~is  147 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLT  147 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEc
Confidence                  35668888764321     0 11    2344678999998888777665421123566555

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.84  E-value=6.5e-08  Score=88.01  Aligned_cols=104  Identities=13%  Similarity=0.087  Sum_probs=74.2

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC-CC---C--CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPK-PN---W--NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-~~---~--~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+++||||  ++-||.+++++|.+     +|++|++++|+.. ..   .  .....+.++.+|++|+++++++++   
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~-----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQE-----QGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHH-----CCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            3589999999  89999999999999     8999999987531 11   0  011256789999999987766543   


Q ss_pred             ----cCCCeeEEEEeccC------C-Cc---cHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 ----QLTDVTHIFYVTWT------N-RS---TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~------~-~~---~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                          .+|.++|+|+....      . ..   .....+++|+.++.++.+++...
T Consensus        81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~  134 (256)
T PRK07889         81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPL  134 (256)
T ss_pred             HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence                36678888775311      0 11   23446899999998888776643

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.82  E-value=5.1e-08  Score=88.84  Aligned_cols=114  Identities=15%  Similarity=0.089  Sum_probs=78.5

Q ss_pred             CCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|.+|||||+  +-||.+++++|++     +|++|++++|+....     .. ....+.++++|++|++++++++.    
T Consensus        10 ~k~~lItGas~g~GIG~a~a~~la~-----~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533         10 GKRGLVVGIANEQSIAWGCARAFRA-----LGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHH-----cCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence            5899999998  5899999999999     899999998874311     00 11234578999999987766543    


Q ss_pred             ---cCCCeeEEEEeccCC----------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           93 ---QLTDVTHIFYVTWTN----------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~----------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                         .+|.++|+|+.....          .++....+++|+.++.++++++...-.+-.+++.+|
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~is  148 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMS  148 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEe
Confidence               357788887643210          013466789999999999887765421113455544

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.82  E-value=4.7e-08  Score=89.06  Aligned_cols=115  Identities=14%  Similarity=0.121  Sum_probs=78.5

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CC-CCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WN-ADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~-~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ++|.++||||+  +-||..++++|.+     .|++|++..|+....        .. ....+.++.+|++|++++.++++
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHA-----AGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHH-----CCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHH
Confidence            45899999986  7999999999999     899998876543210        00 11235688999999988776554


Q ss_pred             -------cCCCeeEEEEeccC-----CC-----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           93 -------QLTDVTHIFYVTWT-----NR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~-----~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                             .+|.++|+|+....     ..     +.....+++|+.++..+++++...-.+-.+++++|
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~is  147 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLT  147 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEe
Confidence                   35678888774321     11     13456789999999988887765411124566555

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.82  E-value=4.2e-08  Score=90.05  Aligned_cols=155  Identities=13%  Similarity=0.047  Sum_probs=96.8

Q ss_pred             CCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|.+|||||++  -||..++++|.+     .|++|++..|+....     . ........+++|++|+++++++++    
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAA-----QGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHh-----CCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            58999999996  899999999999     899999988864210     0 000123468999999987766554    


Q ss_pred             ---cCCCeeEEEEeccC-----C-----CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC
Q 016047           93 ---QLTDVTHIFYVTWT-----N-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~-----~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                         .+|.++|+|+....     .     .++....+++|+.++.++++++...-.+-.+++.+||..         +.  
T Consensus        82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~---------~~--  150 (271)
T PRK06505         82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG---------ST--  150 (271)
T ss_pred             HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC---------cc--
Confidence               35668888764321     0     013456789999999888887654311113455544311         10  


Q ss_pred             CCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                         .+.       |. ...|+.        .+.+...+ ...|+++..+.|+.|-.
T Consensus       151 ---~~~-------~~-~~~Y~asKaAl~~l~r~la~el-~~~gIrVn~v~PG~i~T  194 (271)
T PRK06505        151 ---RVM-------PN-YNVMGVAKAALEASVRYLAADY-GPQGIRVNAISAGPVRT  194 (271)
T ss_pred             ---ccC-------Cc-cchhhhhHHHHHHHHHHHHHHH-hhcCeEEEEEecCCccc
Confidence               000       10 011442        33333333 45689999999998866

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.80  E-value=7.9e-08  Score=88.27  Aligned_cols=114  Identities=16%  Similarity=0.066  Sum_probs=78.2

Q ss_pred             CCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047           25 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        25 ~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      +|++|||||+  +-||.+++++|.+     +|++|++..|+..  ..   .. .......+++|++|+++++++++.   
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~-----~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRA-----AGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH
Confidence            5899999997  7999999999999     8999988877521  10   00 112345789999999887765543   


Q ss_pred             ----CCCeeEEEEeccC-----C-----CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           94 ----LTDVTHIFYVTWT-----N-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        94 ----~~~V~h~a~~~~~-----~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                          +|.++|+|+....     .     .++....+++|+.++..+++++...-.+-.+++.+|
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~is  148 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLT  148 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence                5668887764321     0     013466789999999999988765421123555554

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.79  E-value=3.6e-08  Score=84.22  Aligned_cols=154  Identities=18%  Similarity=0.134  Sum_probs=101.8

Q ss_pred             CcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCC--CCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           19 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA--DHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        19 ~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      ++.+......|+.|++||.|+++++.-..     .++.|-.+.|+..+...+  ...+.+.++|....+-++..+.+...
T Consensus        46 ~~~dve~e~tlvlggnpfsgs~vlk~A~~-----vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~  120 (283)
T KOG4288|consen   46 DKQDVEVEWTLVLGGNPFSGSEVLKNATN-----VVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTF  120 (283)
T ss_pred             chhhhhHHHHhhhcCCCcchHHHHHHHHh-----hceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcc
Confidence            33333335789999999999999999998     799999999985433111  14567788888777666777777766


Q ss_pred             eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCC
Q 016047           97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  176 (396)
Q Consensus        97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~  176 (396)
                      ++-+++.    ..+...+.+.|=....+.++++.+++  +++|+|+|.        ..||-.           |..+  .
T Consensus       121 v~e~~gg----fgn~~~m~~ing~ani~a~kaa~~~g--v~~fvyISa--------~d~~~~-----------~~i~--r  173 (283)
T KOG4288|consen  121 VYEMMGG----FGNIILMDRINGTANINAVKAAAKAG--VPRFVYISA--------HDFGLP-----------PLIP--R  173 (283)
T ss_pred             cHHHhcC----ccchHHHHHhccHhhHHHHHHHHHcC--CceEEEEEh--------hhcCCC-----------Cccc--h
Confidence            6666442    22445555667666667777787765  888988862        122210           1111  2


Q ss_pred             cchh----HHHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047          177 FYYT----LEDILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       177 ~~y~----~e~~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      .|+.    .|..+.    ..++++-+++||+.|||.
T Consensus       174 GY~~gKR~AE~Ell----~~~~~rgiilRPGFiyg~  205 (283)
T KOG4288|consen  174 GYIEGKREAEAELL----KKFRFRGIILRPGFIYGT  205 (283)
T ss_pred             hhhccchHHHHHHH----HhcCCCceeeccceeecc
Confidence            2333    233333    345688999999999996

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.78  E-value=5.2e-08  Score=88.62  Aligned_cols=117  Identities=15%  Similarity=0.004  Sum_probs=77.3

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC---CCCCeeEEEecCCChHHHHHHHhcC---
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLSQL---   94 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~~~~~~~~~---   94 (396)
                      .+|||||+|.||.+++++|.+.... .|++|+++.|+....      ..   ....+.++.+|++|+++++++++.+   
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~-~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKS-PGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhcc-CCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            5899999999999999999841100 488999999975321      10   1235788999999998877665432   


Q ss_pred             --------CCeeEEEEeccCC----C-----ccHHHHHHhHHHHHHHHHHHHcccC----CCcceEEEecc
Q 016047           95 --------TDVTHIFYVTWTN----R-----STEAENCKINGSMFRNVLRAVIPNA----PNLRHVCLQTG  144 (396)
Q Consensus        95 --------~~V~h~a~~~~~~----~-----~~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~~~~~s~  144 (396)
                              +.++|+|+.....    .     +.....+++|+.++..+.+++.+.-    ..-.+++++||
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS  151 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISS  151 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECC
Confidence                    2577877642110    1     1235678999999887777665431    11235666654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.78  E-value=9.6e-08  Score=87.19  Aligned_cols=102  Identities=13%  Similarity=0.110  Sum_probs=72.1

Q ss_pred             CCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--C---CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047           25 QSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKP--N---WN-ADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        25 ~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~---~~-~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      +|++|||||++  -||.+++++|.+     +|++|+++.|+...  .   .. ..+.+.++.+|++|+++++++++.   
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~-----~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHR-----EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHH-----CCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHh
Confidence            57999999985  899999999999     89999988876310  0   10 113456789999999988766643   


Q ss_pred             ----CCCeeEEEEeccCCC-----------ccHHHHHHhHHHHHHHHHHHHcc
Q 016047           94 ----LTDVTHIFYVTWTNR-----------STEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~-----------~~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                          +|.++|+|+......           ......+++|+.+...+.+++..
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  133 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS  133 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence                567888876432110           12345678999998888777654

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.76  E-value=9.7e-08  Score=87.15  Aligned_cols=115  Identities=13%  Similarity=0.062  Sum_probs=75.6

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|++|||||  ++-||.+++++|.+     +|++|++..|.....     .. .......+++|++|++++++++.   
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACRE-----QGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHH
Confidence            3579999997  67999999999999     899998877642110     10 11234578999999988776553   


Q ss_pred             ----cCCCeeEEEEeccCC-------Cc----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEec
Q 016047           93 ----QLTDVTHIFYVTWTN-------RS----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQT  143 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~-------~~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s  143 (396)
                          .+|.++|+|+.....       .+    .....+++|+.++..+.+++... ..+-.+++.+|
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~is  146 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALS  146 (261)
T ss_pred             HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEc
Confidence                367788888754211       01    23445688999988777765543 11113455554

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.76  E-value=7.6e-08  Score=88.45  Aligned_cols=113  Identities=15%  Similarity=0.039  Sum_probs=77.5

Q ss_pred             CCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--C---C-CC-CCCeeEEEecCCChHHHHHHHhc--
Q 016047           25 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--N---W-NA-DHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        25 ~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~---~-~~-~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      +|.+|||||+  +-||..++++|.+     .|++|++.+|+...  .   . .. ... ..+.+|++|.+++.++++.  
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~-----~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFE-----QGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence            5899999997  7899999999999     89999998886310  0   0 00 112 5789999999887665543  


Q ss_pred             -----CCCeeEEEEeccC-----C-C----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           94 -----LTDVTHIFYVTWT-----N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        94 -----~~~V~h~a~~~~~-----~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                           +|.++|+|+....     . .    +.....+++|+.|+..+.+++...-.+-.+++.+|
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~is  143 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLS  143 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEe
Confidence                 5668888764211     0 1    13456789999999888887765411113555555

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.76  E-value=1e-07  Score=85.01  Aligned_cols=102  Identities=8%  Similarity=-0.055  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+++++||||++-||..++++|.+     +|++|+++.|+....      . ....++..+.+|+.|+++++++++    
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~-----~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFAR-----LGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999875421      0 012346678899999987765543    


Q ss_pred             ----cCCCeeEEEEeccCC----Cc---cHHHHHHhHHHHHHHHHHHHc
Q 016047           93 ----QLTDVTHIFYVTWTN----RS---TEAENCKINGSMFRNVLRAVI  130 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~----~~---~~~~~~~~nv~gt~~ll~a~~  130 (396)
                          .+|.++|+++.....    ..   .....+++|+.++..++.++.
T Consensus        79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAA  127 (227)
T ss_pred             HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence                466788877532111    11   223456778888766655444

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.75  E-value=1e-07  Score=86.88  Aligned_cols=115  Identities=13%  Similarity=0.081  Sum_probs=77.0

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC--CC---CC-CCCCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---WN-ADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~--~~---~~-~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      .+|++|||||  ++-||.+++++|++     .|++|+++.|...  ..   .. .......+.+|++|+++++++++.  
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKR-----EGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHH-----CCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHH
Confidence            3589999996  67999999999999     8999988765321  10   00 012234689999999887766543  


Q ss_pred             -----CCCeeEEEEeccCC---------C--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           94 -----LTDVTHIFYVTWTN---------R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~---------~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                           +|.++|+|+.....         .  ++....+++|+.++..+.+++...-.+-.+++++|
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~is  145 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS  145 (260)
T ss_pred             HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEe
Confidence                 56788887653210         1  13445689999999888887765421124566555

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.75  E-value=2.6e-07  Score=86.24  Aligned_cols=115  Identities=19%  Similarity=0.065  Sum_probs=77.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC---------C-------CC-CCCCeeEEEecCCChHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---------N-------WN-ADHLVEYVQCDVSDPEET   87 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---------~-------~~-~~~~v~~~~~Dl~d~~~~   87 (396)
                      +|.+|||||++.||.+++++|++     .|++|++++|+...         .       .. ...++.++++|++|++++
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGA-----AGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            58999999999999999999998     89999999987321         0       00 012466889999999887


Q ss_pred             HHHHh-------cCCCeeEEE-Eecc--C--C--C----ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047           88 QAKLS-------QLTDVTHIF-YVTW--T--N--R----STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  144 (396)
Q Consensus        88 ~~~~~-------~~~~V~h~a-~~~~--~--~--~----~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  144 (396)
                      +++++       .+|.++|+| +...  .  .  .    +.....+++|+.++..+++++...-  ..-.+++.+||
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS  159 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITD  159 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECC
Confidence            66554       356677776 4210  0  1  0    1234567889999888877666541  11235665553

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.74  E-value=7.1e-08  Score=90.32  Aligned_cols=115  Identities=15%  Similarity=0.126  Sum_probs=79.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCCCCCCCCee------EEEecCCChHHHHHHHhcCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVE------YVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~------~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      +.||+||||+|++|++++..|+..+...  ++.+|+++++++..........+      ....|+....++.++++++|.
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi   81 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV   81 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence            4589999999999999999998733221  24589999986532111100111      112344445567788999999


Q ss_pred             eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcceE
Q 016047           97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHV  139 (396)
Q Consensus        97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~  139 (396)
                      |+|+|+.......+..+.++.|+.-.+.+.+.+.+++ +....+
T Consensus        82 VI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iii  125 (325)
T cd01336          82 AILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVL  125 (325)
T ss_pred             EEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence            9999986544444678889999999999999888874 344433

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05599 hypothetical protein; Provisional

Probab=98.74  E-value=2.7e-07  Score=83.38  Aligned_cols=98  Identities=17%  Similarity=0.185  Sum_probs=66.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHh-----
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      |++|||||++-||..++++|.+      |++|++++|+....      ..  ....+.++.+|++|++++++++.     
T Consensus         1 ~~vlItGas~GIG~aia~~l~~------g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   74 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLCH------GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL   74 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHhC------CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh
Confidence            5799999999999999999974      68999999975321      10  11247789999999987766543     


Q ss_pred             --cCCCeeEEEEeccCCC--c----cHHHHHHhHHHHHHHHHHHH
Q 016047           93 --QLTDVTHIFYVTWTNR--S----TEAENCKINGSMFRNVLRAV  129 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~--~----~~~~~~~~nv~gt~~ll~a~  129 (396)
                        .+|.++|+|+......  +    ...+..++|+.+..+++.++
T Consensus        75 ~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  119 (246)
T PRK05599         75 AGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVL  119 (246)
T ss_pred             cCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHH
Confidence              3566777766422111  1    12344577888876665544

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.71  E-value=2.2e-07  Score=84.76  Aligned_cols=115  Identities=10%  Similarity=0.029  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCC-CCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNAD-HLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~-~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      .+|.+|||||++  -||.+++++|.+     +|++|++..|+....     .... ....++++|++|+++++++++.  
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~-----~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKK-----HGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHH-----cCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHH
Confidence            357899999997  799999999998     899999888763110     1001 1223578999999887766543  


Q ss_pred             -----CCCeeEEEEeccC------CCc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           94 -----LTDVTHIFYVTWT------NRS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        94 -----~~~V~h~a~~~~~------~~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                           +|.++|.++....      ..+    +....+++|+.+...+++++...-.+-.+++++|
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~is  146 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLT  146 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEe
Confidence                 5667777654211      011    3456789999999988887654311113555555

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.69  E-value=3.7e-07  Score=84.65  Aligned_cols=119  Identities=16%  Similarity=0.017  Sum_probs=82.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      +..++.++|||||.-||..++++|.+     +|.+|+...|+....         .....++.++++|+++.+++++..+
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~-----~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~  106 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELAL-----RGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAE  106 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHH
Confidence            33457999999999999999999999     899999999986321         1234577889999999998876554


Q ss_pred             c-------CCCeeEEEEeccCCC----ccHHHHHHhHHHHHHHHHHH----HcccCCCcceEEEecccee
Q 016047           93 Q-------LTDVTHIFYVTWTNR----STEAENCKINGSMFRNVLRA----VIPNAPNLRHVCLQTGTKH  147 (396)
Q Consensus        93 ~-------~~~V~h~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a----~~~~~~~~~~~~~~s~~~~  147 (396)
                      .       .|..++.|+....+.    +..+..+.+|..|...|.+.    +++..  ..|++.+||..+
T Consensus       107 ~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~--~~RIV~vsS~~~  174 (314)
T KOG1208|consen  107 EFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA--PSRIVNVSSILG  174 (314)
T ss_pred             HHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC--CCCEEEEcCccc
Confidence            4       233444444333222    23466789999997666554    44332  267887776543

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.68  E-value=1.6e-07  Score=87.34  Aligned_cols=120  Identities=15%  Similarity=0.048  Sum_probs=84.3

Q ss_pred             cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCC--CCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNA--DHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~--~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      |+....+||+||||+|.||+.++..|....   ...++..+++..... ..+  +........+.+|+.++.++++++|.
T Consensus         3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~---~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDv   79 (321)
T PTZ00325          3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNP---HVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADL   79 (321)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHhcCC---CCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCE
Confidence            344444799999999999999999998522   235899999832111 000  01112334566666666788999999


Q ss_pred             eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047           97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                      |+++++.......+..+.+..|+..++++++++++++  +.++++++|
T Consensus        80 VVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~--~~~iviv~S  125 (321)
T PTZ00325         80 VLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA--PKAIVGIVS  125 (321)
T ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEec
Confidence            9999886543334678889999999999999999986  566666654

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=98.68  E-value=1.4e-06  Score=72.79  Aligned_cols=164  Identities=15%  Similarity=0.128  Sum_probs=103.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      |.+..+||||+.-||++++..|.+     .|++|.+.+++....      +.....-..+.||++++++++..++.    
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~-----~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAK-----KGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHh-----cCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHh
Confidence            567899999999999999999999     899999999875432      22222345789999999876654433    


Q ss_pred             ---CCCeeEEEEeccC------CCccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceeecccccccccCCC
Q 016047           94 ---LTDVTHIFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        94 ---~~~V~h~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+.+++||+....      .++++++.+.+|+.|+-.+.+++.+.    ..+...++-+||...-.+   .+|.   
T Consensus        88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiG---N~GQ---  161 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIG---NFGQ---  161 (256)
T ss_pred             cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccc---cccc---
Confidence               3458888775432      23378889999999998887776665    222335555554322111   1221   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                        ..+.    ......  -+..|...+.. ...++++-++-|+.|--
T Consensus       162 --tnYA----AsK~Gv--IgftktaArEl-a~knIrvN~VlPGFI~t  199 (256)
T KOG1200|consen  162 --TNYA----ASKGGV--IGFTKTAAREL-ARKNIRVNVVLPGFIAT  199 (256)
T ss_pred             --hhhh----hhcCce--eeeeHHHHHHH-hhcCceEeEeccccccC
Confidence              0000    000001  12244444444 45679999999888877

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.66  E-value=4.4e-08  Score=83.42  Aligned_cols=89  Identities=16%  Similarity=0.081  Sum_probs=64.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcC----C
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQL----T   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~----~   95 (396)
                      |+++|||||||+|. +++.|.+     .|++|++++|++...      ......+.++.+|+.|++++.++++.+    .
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~-----~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g   74 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCE-----KGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNG   74 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHH-----CcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47999999999876 9999999     899999999975321      111246788899999999888777653    2


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  133 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  133 (396)
                      .+..++.             .+++.+++++..+|++.+
T Consensus        75 ~id~lv~-------------~vh~~~~~~~~~~~~~~g   99 (177)
T PRK08309         75 PFDLAVA-------------WIHSSAKDALSVVCRELD   99 (177)
T ss_pred             CCeEEEE-------------eccccchhhHHHHHHHHc
Confidence            2222222             234456778999999886

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.65  E-value=2.3e-07  Score=79.68  Aligned_cols=112  Identities=30%  Similarity=0.294  Sum_probs=76.1

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC-CCC---------CCCCCeeEEEecCCChHHHHHHHhcC--
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK-PNW---------NADHLVEYVQCDVSDPEETQAKLSQL--   94 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~-~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~~--   94 (396)
                      ++|||||+|-||..+++.|.++    ...+|+++.|++. ...         .....+.++.+|++|++++.+++..+  
T Consensus         2 tylitGG~gglg~~la~~La~~----~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAER----GARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT----T-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHc----CCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHh
Confidence            6899999999999999999983    2337999999832 110         01246789999999999999988764  


Q ss_pred             -----CCeeEEEEeccC---CCc---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047           95 -----TDVTHIFYVTWT---NRS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        95 -----~~V~h~a~~~~~---~~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                           +.|||+++....   ...   .....+..-+.|+.+|.++....  .+.+++..||
T Consensus        78 ~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--~l~~~i~~SS  136 (181)
T PF08659_consen   78 RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--PLDFFILFSS  136 (181)
T ss_dssp             TSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--TTSEEEEEEE
T ss_pred             ccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--CCCeEEEECC
Confidence                 349999875321   111   34556788999999999988864  4777776664

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.64  E-value=6e-08  Score=81.98  Aligned_cols=112  Identities=18%  Similarity=0.219  Sum_probs=80.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCC--CCCC------CC-CCCCeeEEEecCCChHHHHHHHhc--
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARR--PKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~--~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      |++|||||+|-||..++++|++     + ++.|+++.|+  ....      .. ...++.++++|++++++++++++.  
T Consensus         1 k~~lItGa~~giG~~~a~~l~~-----~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALAR-----RGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI   75 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHH-----TTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----cCceEEEEeeecccccccccccccccccccccccccccccccccccccccccc
Confidence            5899999999999999999998     5 5678888887  1110      00 225788999999999887766654  


Q ss_pred             -----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047           94 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                           +|.++|+++......      +.....+.+|+.+...+.+++...  +-.+++++||
T Consensus        76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~g~iv~~sS  135 (167)
T PF00106_consen   76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ--GGGKIVNISS  135 (167)
T ss_dssp             HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH--TTEEEEEEEE
T ss_pred             cccccccccccccccccccccccccchhhhhccccccceeeeeeehheec--cccceEEecc
Confidence                 455777766433111      134567899999999999988872  3566666654

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PLN00015 protochlorophyllide reductase

Probab=98.64  E-value=1.2e-07  Score=88.68  Aligned_cols=115  Identities=11%  Similarity=0.056  Sum_probs=79.5

Q ss_pred             EEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           29 LIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        29 LVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      |||||++.||.+++++|++     +| ++|++++|+....      . .....+.++.+|++|.+++++++.       .
T Consensus         1 lITGas~GIG~aia~~l~~-----~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~   75 (308)
T PLN00015          1 IITGASSGLGLATAKALAE-----TGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRP   75 (308)
T ss_pred             CEeCCCChHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            6999999999999999998     79 9999999875321      1 112357788999999988766554       3


Q ss_pred             CCCeeEEEEeccCC---C----ccHHHHHHhHHHHHHHHHHHHccc--CCC--cceEEEeccceee
Q 016047           94 LTDVTHIFYVTWTN---R----STEAENCKINGSMFRNVLRAVIPN--APN--LRHVCLQTGTKHY  148 (396)
Q Consensus        94 ~~~V~h~a~~~~~~---~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~--~~~~~~~s~~~~y  148 (396)
                      +|.++|+|+.....   .    +.....+++|+.|+..+++++...  ..+  -.+++++||...+
T Consensus        76 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         76 LDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             CCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence            56788887643211   1    134567899999987776655443  111  2467777765443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.59  E-value=2.9e-07  Score=77.94  Aligned_cols=102  Identities=24%  Similarity=0.231  Sum_probs=73.0

Q ss_pred             CCEEEEEcC-CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--CCCCCCCeeEEEecCCChHHHHHHHhcC-------
Q 016047           25 QSVALIVGV-TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVSDPEETQAKLSQL-------   94 (396)
Q Consensus        25 ~~~iLVtGa-tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~~~-------   94 (396)
                      +++|||||. .|-||.+|++++.+     +||.|++..|+-+.  .+..+.++...+.|+++++++.+....+       
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~-----~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFAR-----NGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHh-----CCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            478999986 79999999999999     89999999997543  2222457889999999999876655432       


Q ss_pred             -CCeeEEEEeccC--CCc----cHHHHHHhHHHHHHHHHHHHcc
Q 016047           95 -TDVTHIFYVTWT--NRS----TEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        95 -~~V~h~a~~~~~--~~~----~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                       |..++.|+..-.  ..+    .-...+++|+.|..++.++...
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h  125 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSH  125 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHH
Confidence             234444443221  111    3456789999998887776653

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.55  E-value=8.7e-07  Score=79.75  Aligned_cols=159  Identities=18%  Similarity=0.094  Sum_probs=103.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC---CCCCeeEEEecCCChHHHHHHHhcC--
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLSQL--   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~~~~~~~~~--   94 (396)
                      ++|+|||++--+|..++..+..     +|++|+++.|.....      +.   ....+.+..+|+.|-+++...+...  
T Consensus        34 ~hi~itggS~glgl~la~e~~~-----~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~  108 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKR-----EGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD  108 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHH-----ccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence            6999999999999999999999     899999999975421      11   1123668889999888777666554  


Q ss_pred             -----CCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHcccCCCcc---eEEEeccceeecccccccccCCC
Q 016047           95 -----TDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPNAPNLR---HVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        95 -----~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~---~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                           |.+++||+.+....    +  .-....++|..|+.|++.++..+.+...   +++.++|...-   ...||..  
T Consensus       109 ~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~---~~i~Gys--  183 (331)
T KOG1210|consen  109 LEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM---LGIYGYS--  183 (331)
T ss_pred             ccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh---cCccccc--
Confidence                 45888877543321    1  2345679999999999987776532223   67766542211   1133321  


Q ss_pred             CCCCccCCCCCCCCCCcchhH---HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL---EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~---e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                  +.+...++.   -..+++.+ ...++.++..-|+.+--
T Consensus       184 ------------aYs~sK~alrgLa~~l~qE~-i~~~v~Vt~~~P~~~~t  220 (331)
T KOG1210|consen  184 ------------AYSPSKFALRGLAEALRQEL-IKYGVHVTLYYPPDTLT  220 (331)
T ss_pred             ------------ccccHHHHHHHHHHHHHHHH-hhcceEEEEEcCCCCCC
Confidence                        111122332   33344333 44589999888887776

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.54  E-value=1.9e-06  Score=73.87  Aligned_cols=100  Identities=17%  Similarity=0.113  Sum_probs=68.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC-CCCC-------CCCCCCeeEEEecCCChHHHHHHHhcC---
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR-PKPN-------WNADHLVEYVQCDVSDPEETQAKLSQL---   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~-~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~~~---   94 (396)
                      +.|+||||+.-||-.|+++|++.    .|.++++-.++ ++..       ...++++++++.|+++.+++.++.+.+   
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~----~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKD----KGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcC----CCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence            67999999999999999999986    56776666654 5431       113689999999999998887766543   


Q ss_pred             ------CCeeEEEEeccCCCc-------cHHHHHHhHHHHHHHHHHHH
Q 016047           95 ------TDVTHIFYVTWTNRS-------TEAENCKINGSMFRNVLRAV  129 (396)
Q Consensus        95 ------~~V~h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~  129 (396)
                            +..++.|+..-....       .....+++|..|+..+.+++
T Consensus        80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~  127 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAF  127 (249)
T ss_pred             cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHH
Confidence                  335555554222111       23456799998876655443

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.54  E-value=1.5e-06  Score=78.35  Aligned_cols=160  Identities=17%  Similarity=0.137  Sum_probs=101.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcC----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQL----   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~----   94 (396)
                      .+|-|||||.---+|..|+++|.+     +|+.|++-.-.++..     ....++...++.|++++++++++.+-+    
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~-----~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDK-----KGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHh-----cCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            347899999976679999999999     899999888544321     112467888999999999998876532    


Q ss_pred             --C---CeeEEEEeccCCCc-------cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCC
Q 016047           95 --T---DVTHIFYVTWTNRS-------TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        95 --~---~V~h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                        +   .|+|.|+......+       +.....++|+.|+..+..+.... .+.-.|++.+||         +-|..   
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS---------~~GR~---  170 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSS---------VLGRV---  170 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecc---------cccCc---
Confidence              1   38888774322221       55677899999976665544433 111234555543         33321   


Q ss_pred             CCCccCCCCCCCCCCcchhHH---HHHHHHhhcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTLE---DILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e---~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      ..|.     ..|...+.|+.|   +.++... ..+|+++.++-|| ++-
T Consensus       171 ~~p~-----~g~Y~~SK~aVeaf~D~lR~EL-~~fGV~VsiiePG-~f~  212 (322)
T KOG1610|consen  171 ALPA-----LGPYCVSKFAVEAFSDSLRREL-RPFGVKVSIIEPG-FFK  212 (322)
T ss_pred             cCcc-----cccchhhHHHHHHHHHHHHHHH-HhcCcEEEEeccC-ccc
Confidence            1110     123334445543   3344443 6789999999999 444

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.51  E-value=3.8e-07  Score=82.15  Aligned_cols=97  Identities=20%  Similarity=0.222  Sum_probs=71.4

Q ss_pred             HHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc----CCCeeEEEEeccCCCccHHHHHH
Q 016047           41 LAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ----LTDVTHIFYVTWTNRSTEAENCK  116 (396)
Q Consensus        41 l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----~~~V~h~a~~~~~~~~~~~~~~~  116 (396)
                      ++++|++     +|++|++++|+....    ...+++++|++|.++++++++.    +|.|+|+|+..  ...+....++
T Consensus         1 ~a~~l~~-----~G~~Vv~~~r~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~--~~~~~~~~~~   69 (241)
T PRK12428          1 TARLLRF-----LGARVIGVDRREPGM----TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVP--GTAPVELVAR   69 (241)
T ss_pred             ChHHHHh-----CCCEEEEEeCCcchh----hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCC--CCCCHHHhhh
Confidence            4677887     899999999986542    1245789999999998887764    67788887643  2235677899


Q ss_pred             hHHHHHHHHHHHHcccCCCcceEEEeccceee
Q 016047          117 INGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY  148 (396)
Q Consensus       117 ~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y  148 (396)
                      +|+.++.++++++.+.-.+-.+++++||...|
T Consensus        70 vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~  101 (241)
T PRK12428         70 VNFLGLRHLTEALLPRMAPGGAIVNVASLAGA  101 (241)
T ss_pred             hchHHHHHHHHHHHHhccCCcEEEEeCcHHhh
Confidence            99999999999887642122577777765544

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.49  E-value=3.1e-06  Score=76.04  Aligned_cols=122  Identities=16%  Similarity=0.076  Sum_probs=80.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC------CCCCeeEEEecCCChHHHHHHHh---
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +..++.||||||.+-+|+.++.++.+     +|..+.+.+.+......      ...+++.+.||++|.+++....+   
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~-----rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAK-----RGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHH-----hCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHH
Confidence            44568999999999999999999999     78888888887654210      11257899999999987654433   


Q ss_pred             ----cCCCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceee
Q 016047           93 ----QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHY  148 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y  148 (396)
                          .++.+++.|+......    +  .-+..+++|+.|.-...++-...  ..+--|++.++|...+
T Consensus       110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~  177 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL  177 (300)
T ss_pred             HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc
Confidence                3455777766543221    1  23456899999965554443322  1134577777654433

>PLN00106 malate dehydrogenase

Probab=98.47  E-value=1e-06  Score=82.04  Aligned_cols=108  Identities=14%  Similarity=0.070  Sum_probs=77.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCC--CCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNA--DHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~--~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ++||+||||+|.||+.++..|....   ...++.++++.+... ..+  +........++.+.+++.+++.++|.|+|+|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~---~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitA   94 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNP---LVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPA   94 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC---CCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence            4699999999999999999998632   123799999866211 000  0011122334444555778899999999998


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  135 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  135 (396)
                      +....+..+..+....|+..++++.+.+++++++
T Consensus        95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~  128 (323)
T PLN00106         95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPN  128 (323)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            8654444467888999999999999999998743

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.43  E-value=3.5e-06  Score=72.36  Aligned_cols=104  Identities=15%  Similarity=0.150  Sum_probs=71.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--------CCCCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--------NWNADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------~~~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      .+|++++||+.|-||..++++|++     +|..+.+++.+.+.        +..+...+-|+++|+++..+++++++.  
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~-----kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~   78 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLE-----KGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKIL   78 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHH-----cCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHH
Confidence            368999999999999999999999     78887777655332        123345778999999999888777665  


Q ss_pred             --CCCeeEEEEeccCCCc-cHHHHHHhHHHHH----HHHHHHHccc
Q 016047           94 --LTDVTHIFYVTWTNRS-TEAENCKINGSMF----RNVLRAVIPN  132 (396)
Q Consensus        94 --~~~V~h~a~~~~~~~~-~~~~~~~~nv~gt----~~ll~a~~~~  132 (396)
                        ...|.-+...+....+ +.+....+|+.|.    ...|.+..+.
T Consensus        79 ~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~  124 (261)
T KOG4169|consen   79 ATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKK  124 (261)
T ss_pred             HHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhh
Confidence              2334444433444333 5666778887764    4455555544

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.43  E-value=6.4e-06  Score=75.15  Aligned_cols=159  Identities=15%  Similarity=0.034  Sum_probs=102.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHH-
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKL-   91 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~-   91 (396)
                      ..+|.+|||||+.-||.+++++|.+     .|.+|++..|+....          .....++..+.+|+++.++.++++ 
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~-----~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~   80 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAK-----AGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE   80 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence            3468999999999999999999999     899999999986431          111346789999999886544332 


Q ss_pred             -------hcCCCeeEEEEeccCCCc-------cHHHHHHhHHHH-HHHHHHHHccc--CCCcceEEEeccceeecccccc
Q 016047           92 -------SQLTDVTHIFYVTWTNRS-------TEAENCKINGSM-FRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEA  154 (396)
Q Consensus        92 -------~~~~~V~h~a~~~~~~~~-------~~~~~~~~nv~g-t~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~  154 (396)
                             ..+|.+++.|+.......       .++..+++|+.| +.++..++..+  ..+--.++++|+...+...   
T Consensus        81 ~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~---  157 (270)
T KOG0725|consen   81 FAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG---  157 (270)
T ss_pred             HHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC---
Confidence                   336777777775442211       456778999995 66666666655  2223455555533222110   


Q ss_pred             cccCCCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047          155 FGKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       155 ~g~~~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                                       .+.+ .+|+.        .+-+.... ...|+++-.+-|+.|..+
T Consensus       158 -----------------~~~~-~~Y~~sK~al~~ltr~lA~El-~~~gIRvN~v~PG~i~T~  200 (270)
T KOG0725|consen  158 -----------------PGSG-VAYGVSKAALLQLTRSLAKEL-AKHGIRVNSVSPGLVKTS  200 (270)
T ss_pred             -----------------CCCc-ccchhHHHHHHHHHHHHHHHH-hhcCcEEEEeecCcEeCC
Confidence                             0101 22443        22222222 467899999999988884

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.41  E-value=3.7e-06  Score=71.03  Aligned_cols=162  Identities=14%  Similarity=0.083  Sum_probs=103.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLS-------QL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (396)
                      +.+||||||+.-||..|++++.+     .|-+|++..|+....   ....+.+.-..||+.|.++.++.++       ..
T Consensus         5 gnTiLITGG~sGIGl~lak~f~e-----lgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLE-----LGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHH-----hCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence            46899999999999999999999     788999999986321   1133678889999999986555443       24


Q ss_pred             CCeeEEEEeccCC----Cc----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           95 TDVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        95 ~~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      +.++++|+.-...    .+    +..+..++|+.++.+|..+...+  ..+---++-+||         -.+..     |
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSS---------GLafv-----P  145 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSS---------GLAFV-----P  145 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecc---------ccccC-----c
Confidence            5588887742211    11    23455789999998887776655  111223443432         22211     1


Q ss_pred             ccCCCCCCCCCCc-chhHHHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNF-YYTLEDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~-~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                       .+..|.++.... ..+....|++.. +..++.+.-+-|+.|--
T Consensus       146 -m~~~PvYcaTKAaiHsyt~aLR~Ql-k~t~veVIE~~PP~V~t  187 (245)
T COG3967         146 -MASTPVYCATKAAIHSYTLALREQL-KDTSVEVIELAPPLVDT  187 (245)
T ss_pred             -ccccccchhhHHHHHHHHHHHHHHh-hhcceEEEEecCCceec
Confidence             223333222110 011366677766 77789999998888766

>PRK09620 hypothetical protein; Provisional

Probab=98.36  E-value=7.3e-07  Score=79.03  Aligned_cols=74  Identities=14%  Similarity=0.024  Sum_probs=52.2

Q ss_pred             CCEEEEEcCC----------------ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChH
Q 016047           25 QSVALIVGVT----------------GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPE   85 (396)
Q Consensus        25 ~~~iLVtGat----------------GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~   85 (396)
                      +|+||||+|.                ||+|++|+++|++     +|++|+++++.....   ......+..+.+|....+
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~-----~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~   77 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELIS-----KGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQD   77 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHH-----CCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHH
Confidence            5899999886                9999999999999     899999998643211   111112334555333335


Q ss_pred             HHHHHHh--cCCCeeEEEEe
Q 016047           86 ETQAKLS--QLTDVTHIFYV  103 (396)
Q Consensus        86 ~~~~~~~--~~~~V~h~a~~  103 (396)
                      .+.+.+.  ++|.|+|+|+.
T Consensus        78 ~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         78 KMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             HHHHHhcccCCCEEEECccc
Confidence            6777774  57889999885

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.33  E-value=2.1e-06  Score=76.41  Aligned_cols=72  Identities=15%  Similarity=0.149  Sum_probs=50.9

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh--HHHHHHHhcCCCeeEEEEec
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP--EETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~~~~~~V~h~a~~~  104 (396)
                      ++=-.+|||+|++|+++|++     +|++|+++.|..........+++++.++-.+.  +.+.+.+.++|.|+|+|+.+
T Consensus        19 ~itN~SSG~iG~aLA~~L~~-----~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs   92 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLA-----AGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS   92 (229)
T ss_pred             eecCccchHHHHHHHHHHHh-----CCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence            33335699999999999999     89999999976432111124677777654332  45666777889999998854

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.32  E-value=9.4e-06  Score=93.52  Aligned_cols=115  Identities=17%  Similarity=0.121  Sum_probs=83.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC----CCC------------------------------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----NWN------------------------------   69 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----~~~------------------------------   69 (396)
                      .++.+|||||+|-||..++++|.+.    .|.+|+++.|++..    .|.                              
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~----~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQ----CQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHh----cCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence            4689999999999999999999982    36899999997210    000                              


Q ss_pred             --------------------CCCCeeEEEecCCChHHHHHHHhc------CCCeeEEEEeccCC---C---ccHHHHHHh
Q 016047           70 --------------------ADHLVEYVQCDVSDPEETQAKLSQ------LTDVTHIFYVTWTN---R---STEAENCKI  117 (396)
Q Consensus        70 --------------------~~~~v~~~~~Dl~d~~~~~~~~~~------~~~V~h~a~~~~~~---~---~~~~~~~~~  117 (396)
                                          ....+.++.+|++|.+++.+++..      +|.|+|.|+.....   .   ++....+++
T Consensus      2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813      2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred             cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHH
Confidence                                012467899999999888766653      57799988753321   1   145678999


Q ss_pred             HHHHHHHHHHHHcccCCCcceEEEecc
Q 016047          118 NGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus       118 nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                      |+.|+.++++++....  .++++++||
T Consensus      2152 nv~G~~~Ll~al~~~~--~~~IV~~SS 2176 (2582)
T TIGR02813      2152 KVDGLLSLLAALNAEN--IKLLALFSS 2176 (2582)
T ss_pred             HHHHHHHHHHHHHHhC--CCeEEEEec
Confidence            9999999999987642  456666654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.29  E-value=8.8e-06  Score=73.57  Aligned_cols=115  Identities=19%  Similarity=0.150  Sum_probs=78.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----C--CCC----CCeeEEEecCCC-hHHHHHHHh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W--NAD----HLVEYVQCDVSD-PEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~--~~~----~~v~~~~~Dl~d-~~~~~~~~~   92 (396)
                      ++++||||||++-||..+++.|.+     +|+.|+++.|+....    .  ...    ..+.+..+|+++ .++++.++.
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~   78 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAR-----EGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVA   78 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHH
Confidence            458999999999999999999997     899988888875421    0  011    256678899998 766554433


Q ss_pred             -------cCCCeeEEEEeccC--C-C----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047           93 -------QLTDVTHIFYVTWT--N-R----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~--~-~----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                             .+|.++++|+....  . .    +.....+++|+.|...+.+++..... -++++.+||
T Consensus        79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~Iv~isS  143 (251)
T COG1028          79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-KQRIVNISS  143 (251)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-hCeEEEECC
Confidence                   26667777664321  1 1    14566789999999888885554421 116776653

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.28  E-value=1.8e-05  Score=73.47  Aligned_cols=115  Identities=15%  Similarity=0.046  Sum_probs=72.5

Q ss_pred             CCCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C----------CCC----CCeeEEEec
Q 016047           23 SYQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W----------NAD----HLVEYVQCD   80 (396)
Q Consensus        23 ~~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~----------~~~----~~v~~~~~D   80 (396)
                      .++|.+|||||  +.-||.++++.|.+     .|.+|++ .|.....      .          ...    .....+.+|
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~-----~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   80 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAA-----AGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLD   80 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHH-----CCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecc
Confidence            45789999999  79999999999999     8999887 4431100      0          000    113567888


Q ss_pred             C--CChH------------------HHHHHHh-------cCCCeeEEEEecc---CC---C--ccHHHHHHhHHHHHHHH
Q 016047           81 V--SDPE------------------ETQAKLS-------QLTDVTHIFYVTW---TN---R--STEAENCKINGSMFRNV  125 (396)
Q Consensus        81 l--~d~~------------------~~~~~~~-------~~~~V~h~a~~~~---~~---~--~~~~~~~~~nv~gt~~l  125 (396)
                      +  .+++                  +++++++       .+|.++|+|+...   ..   .  ++....+++|+.++..+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l  160 (303)
T PLN02730         81 AVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL  160 (303)
T ss_pred             eecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            8  3222                  4444332       3677888875311   11   1  14566789999999998


Q ss_pred             HHHHcccCCCcceEEEec
Q 016047          126 LRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus       126 l~a~~~~~~~~~~~~~~s  143 (396)
                      ++++...-.+--+++++|
T Consensus       161 ~~~~~p~m~~~G~II~is  178 (303)
T PLN02730        161 LQHFGPIMNPGGASISLT  178 (303)
T ss_pred             HHHHHHHHhcCCEEEEEe
Confidence            887766411114566555

>PRK06720 hypothetical protein; Provisional

Probab=98.28  E-value=3e-06  Score=71.74  Aligned_cols=76  Identities=17%  Similarity=0.071  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHH------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL------   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~------   91 (396)
                      ++.++||||+|.||..+++.|.+     .|++|++++|+....      . .....+.++.+|+++.+++.+++      
T Consensus        16 gk~~lVTGa~~GIG~aia~~l~~-----~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         16 GKVAIVTGGGIGIGRNTALLLAK-----QGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             CCEEEEecCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999998     799999999875321      0 01234668899999998776644      


Q ss_pred             -hcCCCeeEEEEecc
Q 016047           92 -SQLTDVTHIFYVTW  105 (396)
Q Consensus        92 -~~~~~V~h~a~~~~  105 (396)
                       ..+|.++|+|+...
T Consensus        91 ~G~iDilVnnAG~~~  105 (169)
T PRK06720         91 FSRIDMLFQNAGLYK  105 (169)
T ss_pred             cCCCCEEEECCCcCC
Confidence             34677888877533

>cd00704 MDH Malate dehydrogenase

Probab=98.28  E-value=6.4e-06  Score=77.05  Aligned_cols=109  Identities=17%  Similarity=0.192  Sum_probs=78.2

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh-----------HHHHHHHhc
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-----------EETQAKLSQ   93 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-----------~~~~~~~~~   93 (396)
                      ||.||||+|++|+.++..|...+-..  ..++++.++++...     +..+....|+.|.           ....+.+++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-----~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~   76 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-----KALEGVVMELQDCAFPLLKGVVITTDPEEAFKD   76 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-----CccceeeeehhhhcccccCCcEEecChHHHhCC
Confidence            79999999999999999998632221  12358888886521     1223344454443           345678999


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcceEE
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVC  140 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~  140 (396)
                      +|.|+|+|+....+..+..+.+..|+.-.+.+.+.+.+.+ ++.+.++
T Consensus        77 aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiiv  124 (323)
T cd00704          77 VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLV  124 (323)
T ss_pred             CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9999999886554445788899999999999999999884 6554443

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.19  E-value=2.9e-06  Score=80.15  Aligned_cols=86  Identities=22%  Similarity=0.152  Sum_probs=68.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ++|||.|| |+||+.++..|.+     +| ++|++.+|.+.+.    .....+++.+++|+.|.+++.+++++.|.|+++
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~-----~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~   75 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQ-----NGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINA   75 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHh-----CCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEe
Confidence            68999997 9999999999998     45 7999999986432    112248999999999999999999999989998


Q ss_pred             EEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047          101 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  133 (396)
Q Consensus       101 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  133 (396)
                      +-..       .         ..+++++|.+.+
T Consensus        76 ~p~~-------~---------~~~i~ka~i~~g   92 (389)
T COG1748          76 APPF-------V---------DLTILKACIKTG   92 (389)
T ss_pred             CCch-------h---------hHHHHHHHHHhC
Confidence            5321       0         115788998875

>PRK05086 malate dehydrogenase; Provisional

Probab=98.14  E-value=1.9e-05  Score=73.66  Aligned_cols=112  Identities=13%  Similarity=0.058  Sum_probs=75.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCC-CCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NAD-HLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~-~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      |||+|+||||.+|++++..|.....  .++++++++|++....    ..+ +....+.+  .+.+++.+.++++|.|+.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~--~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIit   76 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLP--AGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLIS   76 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCC--CccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEc
Confidence            5899999999999999988743100  3568888888643210    011 11122333  2233455678899988888


Q ss_pred             EEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047          101 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus       101 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                      ++.......+..+.+..|...++++++++++++  +..++.+.
T Consensus        77 aG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~--~~~ivivv  117 (312)
T PRK05086         77 AGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC--PKACIGII  117 (312)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEc
Confidence            775444334678889999999999999999986  44455443

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.10  E-value=1.7e-05  Score=74.24  Aligned_cols=108  Identities=14%  Similarity=0.153  Sum_probs=75.7

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH-----------HHHHHHhc
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE-----------ETQAKLSQ   93 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~-----------~~~~~~~~   93 (396)
                      +|.|+||+|.+|+.++..|.......  ..++++.+++.+...     ..+....|+.|..           +..+.+.+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~   75 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----VLEGVVMELMDCAFPLLDGVVPTHDPAVAFTD   75 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----ccceeEeehhcccchhcCceeccCChHHHhCC
Confidence            58999999999999999998632211  123588888864321     2233445555443           34578899


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcceE
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHV  139 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~  139 (396)
                      +|.|+|+|+.......+..+....|+.-.+.+.+.+.+++ +..+.+
T Consensus        76 aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iii  122 (324)
T TIGR01758        76 VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVL  122 (324)
T ss_pred             CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence            9999999886544334578889999999999999999874 544333

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.08  E-value=0.0001  Score=68.44  Aligned_cols=35  Identities=17%  Similarity=0.099  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      ++|.+|||||+  .-||.+++++|.+     +|++|++.+|.
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~-----~Ga~Vvv~~~~   43 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAE-----AGATILVGTWV   43 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHH-----CCCEEEEEecc
Confidence            46899999995  8899999999999     89999887643

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.05  E-value=2.5e-05  Score=70.40  Aligned_cols=94  Identities=13%  Similarity=0.027  Sum_probs=66.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFY  102 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~  102 (396)
                      |+|||+||||. |+.|++.|.+     .||+|++.++..... .....+...+..+..|.+++.+.++.  ++.|++..|
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~-----~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH   74 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIA-----QGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATH   74 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHh-----CCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence            48999999999 9999999998     799999999876432 11122234556777888888888876  555777744


Q ss_pred             eccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047          103 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH  138 (396)
Q Consensus       103 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~  138 (396)
                      .   .          -..-++|+.++|++.+....+
T Consensus        75 P---f----------A~~is~~a~~a~~~~~ipylR   97 (256)
T TIGR00715        75 P---F----------AAQITTNATAVCKELGIPYVR   97 (256)
T ss_pred             H---H----------HHHHHHHHHHHHHHhCCcEEE
Confidence            2   1          114566788999988643333

This enzyme was found to be a monomer by gel filtration.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.98  E-value=1.8e-05  Score=73.94  Aligned_cols=159  Identities=12%  Similarity=0.040  Sum_probs=94.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-------EEEEEeCCCCC--C------C-----CCCCCeeEEEecCCCh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARRPKP--N------W-----NADHLVEYVQCDVSDP   84 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~--~------~-----~~~~~v~~~~~Dl~d~   84 (396)
                      ++||.|+||+|++|+.++..|+.     ++.       +++.++.....  .      .     ....++++     .  
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~-----~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--   69 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIAS-----GEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----T--   69 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHh-----ccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----e--
Confidence            46999999999999999999986     333       68888875322  1      0     00011111     1  


Q ss_pred             HHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEeccceeecccccccccCCCCCC
Q 016047           85 EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        85 ~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                      ....+.++++|.|+.+|+....+..+..+.+..|+.-.+.+.+.+.++++ ..+. +.+|-      +..+..      .
T Consensus        70 ~~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~ii-ivvsN------PvD~~t------~  136 (322)
T cd01338          70 DDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKV-LVVGN------PCNTNA------L  136 (322)
T ss_pred             cCcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEE-EEecC------cHHHHH------H
Confidence            11246789999988888764444446788899999999999999998873 4443 32221      000000      0


Q ss_pred             CccCCCCCCC-CCCcc---hhHHHHHHHHhhcCCCeeEEEEcCCceeecC
Q 016047          164 PFTEDMPRLD-APNFY---YTLEDILFEEVEKKEELSWSVHRPDTIFGFS  209 (396)
Q Consensus       164 p~~E~~p~~~-~~~~~---y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~  209 (396)
                      -.....+..| ...+.   ...+++.... ++..+++...+|...|||..
T Consensus       137 ~~~k~sg~~p~~~ViG~t~LDs~Rl~~~l-a~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         137 IAMKNAPDIPPDNFTAMTRLDHNRAKSQL-AKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             HHHHHcCCCChHheEEehHHHHHHHHHHH-HHHhCcChhHeEEEEEEeCC
Confidence            0011111111 11211   1224444333 46778999999988999943

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.83  E-value=3.4e-05  Score=69.40  Aligned_cols=148  Identities=16%  Similarity=0.146  Sum_probs=93.8

Q ss_pred             cCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHH--------hcCC
Q 016047           32 GVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKL--------SQLT   95 (396)
Q Consensus        32 Gat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~--------~~~~   95 (396)
                      |++  +-||..++++|++     .|++|++++|+....      .....+.+++.+|+++++++++++        ..+|
T Consensus         1 g~~~s~GiG~aia~~l~~-----~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD   75 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAE-----EGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRID   75 (241)
T ss_dssp             STSSTSHHHHHHHHHHHH-----TTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred             CCCCCCChHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence            666  9999999999999     899999999986531      001123457999999998776653        4467


Q ss_pred             CeeEEEEeccC---CCc-------cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           96 DVTHIFYVTWT---NRS-------TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        96 ~V~h~a~~~~~---~~~-------~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      .++|+++....   ..+       .....+++|+.++..+++++.+.-.+-..++++|+..         +     ..+ 
T Consensus        76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~---------~-----~~~-  140 (241)
T PF13561_consen   76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIA---------A-----QRP-  140 (241)
T ss_dssp             EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGG---------G-----TSB-
T ss_pred             EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchh---------h-----ccc-
Confidence            78888875443   111       3456789999999999888865411123445444211         1     011 


Q ss_pred             cCCCCCCCCCCcchhH--------HHHHHHHhhcC-CCeeEEEEcCCceee
Q 016047          166 TEDMPRLDAPNFYYTL--------EDILFEEVEKK-EELSWSVHRPDTIFG  207 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~--------e~~l~~~~~~~-~~~~~~ilRp~~v~G  207 (396)
                            .+... .|+.        .+.+...+ .. .|+++-.|.|+.|-.
T Consensus       141 ------~~~~~-~y~~sKaal~~l~r~lA~el-~~~~gIrVN~V~pG~i~t  183 (241)
T PF13561_consen  141 ------MPGYS-AYSASKAALEGLTRSLAKEL-APKKGIRVNAVSPGPIET  183 (241)
T ss_dssp             ------STTTH-HHHHHHHHHHHHHHHHHHHH-GGHGTEEEEEEEESSBSS
T ss_pred             ------Cccch-hhHHHHHHHHHHHHHHHHHh-ccccCeeeeeecccceec
Confidence                  01111 2542        23333333 45 789999999988876

...

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.77  E-value=4.1e-05  Score=63.00  Aligned_cols=103  Identities=17%  Similarity=0.070  Sum_probs=74.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCC-CCeeEEEecCCChHHHHHHHhcCC---C
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNAD-HLVEYVQCDVSDPEETQAKLSQLT---D   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~-~~v~~~~~Dl~d~~~~~~~~~~~~---~   96 (396)
                      .++.||+||+.--||+.++..|.+     .|.+|+++.|.+...   .... .-+..+.+|+.+-+.+.+++..+-   .
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~-----aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAK-----AGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDG   80 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHh-----cCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhh
Confidence            457899999999999999999999     799999999987432   1112 348889999999888888877643   3


Q ss_pred             eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcc
Q 016047           97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                      .++.|+.+-.+.      .+.+..|++|+.+..++.+...+
T Consensus        81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var  121 (245)
T KOG1207|consen   81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVAR  121 (245)
T ss_pred             hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHH
Confidence            555555433221      13345678999998777665443

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=97.75  E-value=7.6e-05  Score=67.51  Aligned_cols=158  Identities=15%  Similarity=0.105  Sum_probs=99.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCC--CCeeEEEecCCChHH----HHHH
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNAD--HLVEYVQCDVSDPEE----TQAK   90 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~--~~v~~~~~Dl~d~~~----~~~~   90 (396)
                      ++++=..|||||.-||+..+++|.+     +|++|+.++|..++.      ....  -.+.++..|.++++.    +.+.
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-----rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~  121 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-----RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEK  121 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHH
Confidence            4556789999999999999999999     899999999986432      1111  246789999988764    6666


Q ss_pred             HhcCCC--eeEEEEeccCCCc-----cH---HHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047           91 LSQLTD--VTHIFYVTWTNRS-----TE---AENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        91 ~~~~~~--V~h~a~~~~~~~~-----~~---~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                      +.+.|.  ++++++..+....     +.   .....+|+.++..+.+.....  .++--.++.++|      +   -|  
T Consensus       122 l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS------~---ag--  190 (312)
T KOG1014|consen  122 LAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGS------F---AG--  190 (312)
T ss_pred             hcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecc------c---cc--
Confidence            777775  7777776553322     11   334578888876665544433  111223443331      1   11  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                         -.|.       |. -..|+.        .+.|.+.+ +..|+.+-.+-|..|...
T Consensus       191 ---~~p~-------p~-~s~ysasK~~v~~~S~~L~~Ey-~~~gI~Vq~v~p~~VaTk  236 (312)
T KOG1014|consen  191 ---LIPT-------PL-LSVYSASKAFVDFFSRCLQKEY-ESKGIFVQSVIPYLVATK  236 (312)
T ss_pred             ---cccC-------hh-HHHHHHHHHHHHHHHHHHHHHH-HhcCeEEEEeehhheecc
Confidence               1111       11 112443        44555555 677899999988888873

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.72  E-value=5.5e-05  Score=65.69  Aligned_cols=72  Identities=22%  Similarity=0.136  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      .+++++|+||+|.+|+.+++.|.+     .|++|++++|+....      .....+.++..+|..+.+++.++++++|.|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~-----~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAR-----EGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence            457999999999999999999998     788999999975321      111124456678889999888999999977


Q ss_pred             eEE
Q 016047           98 THI  100 (396)
Q Consensus        98 ~h~  100 (396)
                      ++.
T Consensus       102 i~a  104 (194)
T cd01078         102 FAA  104 (194)
T ss_pred             EEC
Confidence            765

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.64  E-value=6.2e-05  Score=61.64  Aligned_cols=105  Identities=15%  Similarity=0.129  Sum_probs=72.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      +||.|+||+|.+|++++..|...+.   ..+++.++++....           .+......+..+|       .+.++++
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l---~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~a   70 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGL---ADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDA   70 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTT---SSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC---CCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccc
Confidence            5899999999999999999987432   34899999874321           0111122232322       2457788


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      |.|+-.++....+..+..+.++.|..-.+.+.+.+.+.+++...++
T Consensus        71 Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~viv  116 (141)
T PF00056_consen   71 DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIV  116 (141)
T ss_dssp             SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred             cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEE
Confidence            8777776644333446788899999999999999999876554333

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.62  E-value=0.00016  Score=69.59  Aligned_cols=72  Identities=18%  Similarity=0.005  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcC----------------CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHH
Q 016047           23 SYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE   86 (396)
Q Consensus        23 ~~~~~iLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~   86 (396)
                      ..+++||||||                +|.+|.+++++|.+     +|++|+++++......  ..+  +..+|+.+.++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~-----~Ga~V~~v~~~~~~~~--~~~--~~~~dv~~~~~  256 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAAR-----RGADVTLVSGPVNLPT--PAG--VKRIDVESAQE  256 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHH-----CCCEEEEeCCCccccC--CCC--cEEEccCCHHH
Confidence            35689999999                99999999999999     8999999998653211  122  45689999877


Q ss_pred             HHHHH----hcCCCeeEEEEe
Q 016047           87 TQAKL----SQLTDVTHIFYV  103 (396)
Q Consensus        87 ~~~~~----~~~~~V~h~a~~  103 (396)
                      +.+++    ..+|.++|+|+.
T Consensus       257 ~~~~v~~~~~~~DilI~~Aav  277 (399)
T PRK05579        257 MLDAVLAALPQADIFIMAAAV  277 (399)
T ss_pred             HHHHHHHhcCCCCEEEEcccc
Confidence            76655    346778888775

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.61  E-value=8.9e-05  Score=71.68  Aligned_cols=70  Identities=33%  Similarity=0.423  Sum_probs=53.6

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      |+|.|| |++|+.+++.|.+.    ..+ +|++.+|+....     .....+++.+++|+.|.+++.++++++|.|++|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~----~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARR----GPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCA   75 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCT----TCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred             CEEEcC-cHHHHHHHHHHhcC----CCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence            799999 99999999999984    345 899999986431     1133689999999999999999999999999995


Q ss_pred             E
Q 016047          102 Y  102 (396)
Q Consensus       102 ~  102 (396)
                      .
T Consensus        76 g   76 (386)
T PF03435_consen   76 G   76 (386)
T ss_dssp             S
T ss_pred             c
Confidence            5

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.57  E-value=3.1e-05  Score=72.35  Aligned_cols=71  Identities=17%  Similarity=0.154  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      .+++|+||||+|+||+.++++|.+.    .| .+|+.+.|........  ..++..+|+.   ++.+++.++|.|+|+++
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~----~gv~~lilv~R~~~rl~~L--a~el~~~~i~---~l~~~l~~aDiVv~~ts  224 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAK----TGVAELLLVARQQERLQEL--QAELGGGKIL---SLEEALPEADIVVWVAS  224 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhh----CCCCEEEEEcCCHHHHHHH--HHHhccccHH---hHHHHHccCCEEEECCc
Confidence            4589999999999999999999852    23 4788888864322100  0112234443   46688899999999976


Q ss_pred             e
Q 016047          103 V  103 (396)
Q Consensus       103 ~  103 (396)
                      .
T Consensus       225 ~  225 (340)
T PRK14982        225 M  225 (340)
T ss_pred             C
Confidence            4

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.53  E-value=0.00049  Score=64.36  Aligned_cols=103  Identities=15%  Similarity=0.075  Sum_probs=70.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCC--C------C-----CCCCCeeEEEecCCChHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKP--N------W-----NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~--~------~-----~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      +.||.|+||+|++|+.++..|.......  +..+++.++.....  .      .     ....++++.       ....+
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~   75 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-------TDPEE   75 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-------cChHH
Confidence            4689999999999999999998731110  11178888875421  1      0     000111111       12246


Q ss_pred             HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCC
Q 016047           90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  134 (396)
Q Consensus        90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  134 (396)
                      .++++|.|+..|+.......+..+.+..|+.-.+.+.+.+.++++
T Consensus        76 ~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~  120 (323)
T TIGR01759        76 AFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAK  120 (323)
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            788999988888765444447888999999999999999999875

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=97.52  E-value=6.8e-05  Score=51.65  Aligned_cols=34  Identities=15%  Similarity=0.078  Sum_probs=23.8

Q ss_pred             ccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          359 AKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       359 ~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      .++.|++||++ |||+|+++++++++++.+|+++.
T Consensus        24 ~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n   58 (62)
T PF13950_consen   24 HLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN   58 (62)
T ss_dssp             EE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred             hhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence            56789999986 69999999999999999998764

...

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.47  E-value=0.00042  Score=64.66  Aligned_cols=103  Identities=16%  Similarity=0.161  Sum_probs=67.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCCC-------CC----CCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWN-------AD----HLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~-------~~----~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      +||.|+||||++|..++..|+.     .|+  +|++++|.......       .+    ..... .....  .+ .+.+.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~-----~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~--~d-~~~l~   71 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAK-----EDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKIS--SD-LSDVA   71 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEEC--CC-HHHhC
Confidence            5899999999999999999998     554  59999995411100       00    00110 11111  11 23489


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      ++|.|+-+++.......+..+....|+.-.+.+++.+.+..++.+
T Consensus        72 ~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~  116 (309)
T cd05294          72 GSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTK  116 (309)
T ss_pred             CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence            999888887654333335577889999999999998888765443

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK05442 malate dehydrogenase; Provisional

Probab=97.46  E-value=0.0011  Score=62.14  Aligned_cols=104  Identities=16%  Similarity=0.135  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh-----------HHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-----------EETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-----------~~~~~~~   91 (396)
                      ++||.|+||+|++|+.++..|.......  .-.++..++..+...     ..+-...|+.|.           ....+.+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~-----~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~   78 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALK-----ALEGVVMELDDCAFPLLAGVVITDDPNVAF   78 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCccc-----ccceeehhhhhhhhhhcCCcEEecChHHHh
Confidence            4699999999999999999887621110  011688888754211     000111111111           1224678


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  133 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  133 (396)
                      +++|.|+-+|+.......+..+.+..|+.-.+.+.+.+.++.
T Consensus        79 ~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~  120 (326)
T PRK05442         79 KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVA  120 (326)
T ss_pred             CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            899988888775443444778889999999999999999864

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.40  E-value=0.00093  Score=62.05  Aligned_cols=109  Identities=17%  Similarity=0.116  Sum_probs=73.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC----CC--CCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----AD--HLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~--~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      +||.|+||+|++|+.++..|......   .++.+++.+ .....    .+  ....+....  ..+++.+.++++|.|+-
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~---~elvLiDi~-~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvi   74 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLV---SELALYDIV-NTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVI   74 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC---cEEEEEecC-ccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEE
Confidence            48999999999999999999873211   378888876 21100    00  111111110  11234567899998888


Q ss_pred             EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047          100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus       100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +|+....+..+..++++.|..-.+.+.+...+++++...++
T Consensus        75 taG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~viv  115 (310)
T cd01337          75 PAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILI  115 (310)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            87765444447888999999999999999998876554443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.40  E-value=0.00023  Score=65.27  Aligned_cols=82  Identities=11%  Similarity=-0.012  Sum_probs=59.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      -.++|.|||||.|.++++++.+.-.. .+...-+..|+..+.           ..+.+...++.+|.+|++++.+..+.+
T Consensus         6 yDvVIyGASGfTG~yivee~v~~~~~-~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen    6 YDVVIYGASGFTGKYIVEEAVSSQVF-EGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA   84 (423)
T ss_pred             eeEEEEccccccceeeHHHHhhhhcc-cCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence            35899999999999999999872211 355666667764321           011122338999999999999999999


Q ss_pred             CCeeEEEEeccCCC
Q 016047           95 TDVTHIFYVTWTNR  108 (396)
Q Consensus        95 ~~V~h~a~~~~~~~  108 (396)
                      ..|++|++.-..+.
T Consensus        85 ~vivN~vGPyR~hG   98 (423)
T KOG2733|consen   85 RVIVNCVGPYRFHG   98 (423)
T ss_pred             EEEEeccccceecC
Confidence            99999988543443

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.39  E-value=9.7e-05  Score=60.64  Aligned_cols=101  Identities=19%  Similarity=0.132  Sum_probs=74.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhc------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ------   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~------   93 (396)
                      ++.-.|||||..-+|...++.|.+     +|..|..++-..+.-    .....++-|...|+++.++++.+++.      
T Consensus         8 kglvalvtggasglg~ataerlak-----qgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfg   82 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAK-----QGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFG   82 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHh-----cCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence            345679999999999999999999     899999999754321    01125778999999999998887765      


Q ss_pred             -CCCeeEEEEeccCCCc------------cHHHHHHhHHHHHHHHHHHH
Q 016047           94 -LTDVTHIFYVTWTNRS------------TEAENCKINGSMFRNVLRAV  129 (396)
Q Consensus        94 -~~~V~h~a~~~~~~~~------------~~~~~~~~nv~gt~~ll~a~  129 (396)
                       .|..++||+.+.....            +....+++|+.||-|++...
T Consensus        83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~  131 (260)
T KOG1199|consen   83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLG  131 (260)
T ss_pred             ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeeh
Confidence             4568888886542211            33445689999999887643

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.22  E-value=0.0017  Score=60.39  Aligned_cols=108  Identities=14%  Similarity=0.110  Sum_probs=71.6

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCC-CCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ||.|+||+|.+|+.++..|.....   ..++.++++++...    ... .....+....  +.+++.+.++++|.|+-.|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~---~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvita   75 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPY---VSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPA   75 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCC---CcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeC
Confidence            589999999999999999987321   12789898865111    000 0111111101  1122456789999888887


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                      +....+..+..+....|+.-.+.+.+.+.+.+++-..+
T Consensus        76 G~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iii  113 (312)
T TIGR01772        76 GVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMIL  113 (312)
T ss_pred             CCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEE
Confidence            75444444778889999999999999999887655433

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.19  E-value=0.0054  Score=57.40  Aligned_cols=101  Identities=14%  Similarity=0.057  Sum_probs=70.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ++||.|+|| |.+|+.++..|..     .|.  ++..++++....          .....++.+...   +    .+.++
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~-----~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~----~~~~~   72 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVN-----QGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D----YSDCK   72 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C----HHHhC
Confidence            479999997 9999999999987     444  799999865421          000012222222   1    24578


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH  138 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~  138 (396)
                      ++|.|+-.|+....+..+..+.+..|+.-.+.+++.+++.++....
T Consensus        73 ~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~v  118 (315)
T PRK00066         73 DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIF  118 (315)
T ss_pred             CCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence            9998888877544444467888999999999999999988764443

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.17  E-value=0.0012  Score=62.58  Aligned_cols=75  Identities=16%  Similarity=0.145  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCChhHHH--HHHHcCCCCCCCCCcEEEEEeCCCC--C-C-----C---------CC--CCCeeEEEecCC
Q 016047           24 YQSVALIVGVTGIVGNS--LAEILPLPDTPGGPWKVYGVARRPK--P-N-----W---------NA--DHLVEYVQCDVS   82 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~--l~~~L~~~~~~~~g~~V~~l~R~~~--~-~-----~---------~~--~~~v~~~~~Dl~   82 (396)
                      -+|++|||||++-+|.+  ++++| +     .|.+|+++++...  . .     |         ..  ...+..+.+|++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~-----~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVs  113 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-G-----AGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAF  113 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-H-----cCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCC
Confidence            35899999999999999  89999 7     7999888885321  1 0     0         01  123457899999


Q ss_pred             ChHHHHHHHh-------cCCCeeEEEEec
Q 016047           83 DPEETQAKLS-------QLTDVTHIFYVT  104 (396)
Q Consensus        83 d~~~~~~~~~-------~~~~V~h~a~~~  104 (396)
                      +++++.++++       .+|.++|.++.+
T Consensus       114 s~E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        114 SDEIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            9987655443       367778876643

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.15  E-value=0.0033  Score=60.98  Aligned_cols=109  Identities=17%  Similarity=0.094  Sum_probs=72.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCC--CCCc--EEEEEeCCCCCC----------C-CCCCCeeEEEecCCChHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTP--GGPW--KVYGVARRPKPN----------W-NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~--~~g~--~V~~l~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      .-||.|+||+|++|++++..|....-.  .++.  +++.++++.+..          . +...++.+..+   +    .+
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye  172 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YE  172 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence            468999999999999999999873000  0143  688888765432          0 00112221122   2    35


Q ss_pred             HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcc-cCCCcceEE
Q 016047           90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIP-NAPNLRHVC  140 (396)
Q Consensus        90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~-~~~~~~~~~  140 (396)
                      .++++|.|+-.|+....+..+..+..+.|+.-.+.+.+...+ ++++.+.++
T Consensus       173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIV  224 (444)
T PLN00112        173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIV  224 (444)
T ss_pred             HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            688999888887754434447788999999999999999998 566555444

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.14  E-value=0.00083  Score=57.46  Aligned_cols=67  Identities=15%  Similarity=0.079  Sum_probs=40.9

Q ss_pred             EcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh--HHHHHHHhcCCCeeEEEEec
Q 016047           31 VGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP--EETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        31 tGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~~~~~~V~h~a~~~  104 (396)
                      --+||-.|..|++++..     +|++|+.+.....-.  .+.+++.+.+.=.+.  +.+.+.+..+|.++|+|+.+
T Consensus        25 N~SSG~~G~~lA~~~~~-----~Ga~V~li~g~~~~~--~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   25 NRSSGKMGAALAEEAAR-----RGAEVTLIHGPSSLP--PPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             ES--SHHHHHHHHHHHH-----TT-EEEEEE-TTS------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             CCCcCHHHHHHHHHHHH-----CCCEEEEEecCcccc--ccccceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence            34589999999999999     899999998764211  124777666553222  34555667788899998753

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.08  E-value=0.0053  Score=57.28  Aligned_cols=99  Identities=13%  Similarity=0.031  Sum_probs=70.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCCC-----------CCCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      +||.|.| +|.+|+.++..|+.     .|  ++|++++|++....           .......+..   .+.    +.+.
T Consensus         1 ~kI~IIG-aG~vG~~~a~~l~~-----~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~   67 (306)
T cd05291           1 RKVVIIG-AGHVGSSFAYSLVN-----QGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCK   67 (306)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----cCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhC
Confidence            4899999 59999999999988     56  58999999764320           0011222221   122    3468


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      ++|.|+.+++.......+..+.+..|+.-.+.+.+.+++++++..
T Consensus        68 ~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~  112 (306)
T cd05291          68 DADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGI  112 (306)
T ss_pred             CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            899888887754444446788899999999999999999876543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.00  E-value=0.0015  Score=58.15  Aligned_cols=68  Identities=15%  Similarity=0.133  Sum_probs=45.9

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHH-------HhcCCCeeE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-------LSQLTDVTH   99 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-------~~~~~~V~h   99 (396)
                      +.+=-.++|.||.+++++|.+     +|++|+++++.....  . .  ....+|+.+.+++.+.       +..+|.++|
T Consensus        17 R~itN~SSGgIG~AIA~~la~-----~Ga~Vvlv~~~~~l~--~-~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVn   86 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLS-----AGHEVTLVTTKRALK--P-E--PHPNLSIREIETTKDLLITLKELVQEHDILIH   86 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHH-----CCCEEEEEcChhhcc--c-c--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEE
Confidence            344444599999999999999     899999887642111  0 0  1235788887655443       234677899


Q ss_pred             EEEec
Q 016047          100 IFYVT  104 (396)
Q Consensus       100 ~a~~~  104 (396)
                      +|+.+
T Consensus        87 nAgv~   91 (227)
T TIGR02114        87 SMAVS   91 (227)
T ss_pred             CCEec
Confidence            88753

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=96.97  E-value=0.0011  Score=63.44  Aligned_cols=73  Identities=11%  Similarity=0.179  Sum_probs=45.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHH-HHhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQA-KLSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~h~  100 (396)
                      +.++|.|.||||++|..|++.|.+.    ..++|+.+.+..... .......+...+|+.+.++++. .++++|.||-+
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~h----P~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~A  111 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANH----PDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCC  111 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhC----CCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEc
Confidence            5679999999999999999999984    256899988754321 0011111223345443333332 25778865554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.93  E-value=0.0028  Score=60.87  Aligned_cols=73  Identities=21%  Similarity=0.017  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcC----------------CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHH
Q 016047           23 SYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE   86 (396)
Q Consensus        23 ~~~~~iLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~   86 (396)
                      ..+++||||||                ||.+|..++++|.+     .|++|+.+.+......+  ..  ...+|+.+.++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~-----~Ga~V~~~~g~~~~~~~--~~--~~~~~v~~~~~  253 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYK-----RGADVTLITGPVSLLTP--PG--VKSIKVSTAEE  253 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHH-----CCCEEEEeCCCCccCCC--CC--cEEEEeccHHH
Confidence            45789999999                47899999999999     89999998876533211  22  35689988877


Q ss_pred             H-HHHH----hcCCCeeEEEEec
Q 016047           87 T-QAKL----SQLTDVTHIFYVT  104 (396)
Q Consensus        87 ~-~~~~----~~~~~V~h~a~~~  104 (396)
                      + ++.+    ..+|.++++|+.+
T Consensus       254 ~~~~~~~~~~~~~D~~i~~Aavs  276 (390)
T TIGR00521       254 MLEAALNELAKDFDIFISAAAVA  276 (390)
T ss_pred             HHHHHHHhhcccCCEEEEccccc
Confidence            7 4344    3467788888754

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.81  E-value=0.0098  Score=57.82  Aligned_cols=110  Identities=7%  Similarity=-0.071  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCC-------------CCCCCCeeEEEecCCChHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEETQ   88 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~~~   88 (396)
                      .+-+|+||||+|.||.+|+-.|.+-.-..  +-..++.++..+...             .+...++.+. .|      ..
T Consensus       122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~------~~  194 (452)
T cd05295         122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD------LD  194 (452)
T ss_pred             CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC------CH
Confidence            35789999999999999999998721110  112355555531111             0111123332 21      14


Q ss_pred             HHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           89 AKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        89 ~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      ++++++|.|+-+++.......+..+..+.|+.-.+.+.++..+.+++-..++
T Consensus       195 ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~Vl  246 (452)
T cd05295         195 VAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVI  246 (452)
T ss_pred             HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence            6789999888887754444447788899999999999999988865334444

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.75  E-value=0.008  Score=55.46  Aligned_cols=105  Identities=18%  Similarity=0.123  Sum_probs=70.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----------NADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      +||.|+|| |+||+.++..|+.+.   -+.++..++.......           ..... ..+.+| .+    .+.++++
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~---~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~----y~~~~~a   70 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQG---LGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GD----YEDLKGA   70 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhccc---ccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CC----hhhhcCC
Confidence            58999999 999999999997632   1337899998732210           00011 122222 11    3457888


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      |.|+-.|+.+.-+..+..++++.|..-.+.+.++..+.+++...++
T Consensus        71 DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlV  116 (313)
T COG0039          71 DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLV  116 (313)
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            9888887655444447888999999999999999988876443333

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.73  E-value=0.0019  Score=57.35  Aligned_cols=69  Identities=20%  Similarity=0.196  Sum_probs=54.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~  100 (396)
                      |+++|.| .|-+|+.+++.|.+     .||+|+++++++....   ......+.+.+|-+|++.|+++ +.++|.++-+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~-----~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~   73 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSE-----EGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAA   73 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHh-----CCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEe
Confidence            5788888 89999999999999     8999999999875421   1124678999999999999886 6666654444

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.71  E-value=0.0011  Score=60.47  Aligned_cols=78  Identities=19%  Similarity=0.052  Sum_probs=55.7

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--CCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      +..|...++|-|||||.|..++++|..     +|.+-....|+..+..  ...-+.++-..++.++..+++.+...+.|+
T Consensus         2 ~~e~e~d~iiYGAtGy~G~lvae~l~~-----~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVl   76 (382)
T COG3268           2 PMEREYDIIIYGATGYAGGLVAEYLAR-----EGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVL   76 (382)
T ss_pred             CCCcceeEEEEccccchhHHHHHHHHH-----cCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEE
Confidence            455667899999999999999999998     6777655567653210  001122333444445889999999999999


Q ss_pred             EEEEe
Q 016047           99 HIFYV  103 (396)
Q Consensus        99 h~a~~  103 (396)
                      ||++.
T Consensus        77 ncvGP   81 (382)
T COG3268          77 NCVGP   81 (382)
T ss_pred             ecccc
Confidence            99884

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.71  E-value=0.0038  Score=54.08  Aligned_cols=102  Identities=14%  Similarity=0.065  Sum_probs=63.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE--EEEEeCCCCCCCCCCCCeeEE--------EecCCChHHHHHHH
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK--VYGVARRPKPNWNADHLVEYV--------QCDVSDPEETQAKL   91 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~--V~~l~R~~~~~~~~~~~v~~~--------~~Dl~d~~~~~~~~   91 (396)
                      ..|.+-|||||++.-||..++..+.+     .+-+  +++..|....    ..++.+.        .+|++....+.+..
T Consensus         3 ~~~r~villTGaSrgiG~~~v~~i~a-----ed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~   73 (253)
T KOG1204|consen    3 LNMRKVILLTGASRGIGTGSVATILA-----EDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALR   73 (253)
T ss_pred             cccceEEEEecCCCCccHHHHHHHHh-----cchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHH
Confidence            45778899999999999888888876     3333  4444443222    1333333        44444443333322


Q ss_pred             hc-------CCCeeEEEEeccCCC-------c--cHHHHHHhHHHHHHHHHHHHccc
Q 016047           92 SQ-------LTDVTHIFYVTWTNR-------S--TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        92 ~~-------~~~V~h~a~~~~~~~-------~--~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      +.       -+.|+|.|+......       +  ....+++.|+.+...|...+.+.
T Consensus        74 e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~  130 (253)
T KOG1204|consen   74 EAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPK  130 (253)
T ss_pred             hhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHH
Confidence            21       234999988644321       1  45678999999999888866554

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.67  E-value=0.017  Score=51.95  Aligned_cols=96  Identities=16%  Similarity=0.021  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a  101 (396)
                      |.++|||.|||+= |+.|++.|.+     .|++|++.+-..... .....+.++.|-+.+.+.+.+.++.  ++.|+.. 
T Consensus         1 ~~~~IlvlgGT~e-gr~la~~L~~-----~g~~v~~Svat~~g~-~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDA-   72 (248)
T PRK08057          1 MMPRILLLGGTSE-ARALARALAA-----AGVDIVLSLAGRTGG-PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDA-   72 (248)
T ss_pred             CCceEEEEechHH-HHHHHHHHHh-----CCCeEEEEEccCCCC-cccCCceEEECCCCCHHHHHHHHHHCCCCEEEEC-
Confidence            4578999999998 9999999998     788877665443222 2335778888888899999998875  4446655 


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                        +++..          ..-++|+.++|++.+....++
T Consensus        73 --THPfA----------~~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         73 --THPYA----------AQISANAAAACRALGIPYLRL   98 (248)
T ss_pred             --CCccH----------HHHHHHHHHHHHHhCCcEEEE
Confidence              33221          134557889999886433333

>PRK04148 hypothetical protein; Provisional

Probab=96.60  E-value=0.0025  Score=51.04  Aligned_cols=67  Identities=13%  Similarity=0.048  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      +++|++.| +| .|.+++..|.+     .|++|++++.++.... .....++++.+|+.+++  .+..+++|.|+.+
T Consensus        17 ~~kileIG-~G-fG~~vA~~L~~-----~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysi   84 (134)
T PRK04148         17 NKKIVELG-IG-FYFKVAKKLKE-----SGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSI   84 (134)
T ss_pred             CCEEEEEE-ec-CCHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEe
Confidence            47899999 78 69899999998     8999999998875321 11246789999999986  2446777766555

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.60  E-value=0.024  Score=52.84  Aligned_cols=101  Identities=8%  Similarity=0.013  Sum_probs=69.3

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCC-CCCeeEEEecCCChHHHHHHHhcC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNA-DHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~-~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      ||.|.|+ |++|+.++..|+.....   -++..++...+..           ... ..++.+..+|       .+.++++
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~---~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~a   69 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLF---SEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADA   69 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCC---CEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCC
Confidence            5889997 99999999999874322   2799999864321           111 1134444333       3568899


Q ss_pred             CCeeEEEEeccCCCcc--HHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047           95 TDVTHIFYVTWTNRST--EAENCKINGSMFRNVLRAVIPNAPNLRH  138 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~~~~~~  138 (396)
                      |.|+-.|+....+..+  ..+.+..|+.-.+.+.+.+.+++++...
T Consensus        70 DivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~  115 (307)
T cd05290          70 DIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVI  115 (307)
T ss_pred             CEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence            9877777754333333  4888999999999999999998765443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02602 lactate dehydrogenase

Probab=96.57  E-value=0.031  Score=52.98  Aligned_cols=105  Identities=15%  Similarity=0.085  Sum_probs=70.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +||.|+|+ |.+|+.++..|+.....   -++..++.+....          ........+ .++ .+    .+.++++|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~---~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~d----y~~~~daD  107 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLA---DELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TD----YAVTAGSD  107 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC---CEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CC----HHHhCCCC
Confidence            59999995 99999999999873322   2799999865321          000012222 221 12    23478999


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      .|+-+|+....+..+..+.+..|+.-.+.+.+.+++++++-..++
T Consensus       108 iVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~iviv  152 (350)
T PLN02602        108 LCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLI  152 (350)
T ss_pred             EEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            888887754433346778889999999999999998876554433

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.54  E-value=0.0028  Score=62.64  Aligned_cols=69  Identities=22%  Similarity=0.151  Sum_probs=54.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~  100 (396)
                      |+|+|.|+ |.+|.++++.|.+     .|++|+++++++...  .....+++++.+|.+++..+.++ +.+++.|+-+
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~-----~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~   72 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSG-----ENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAV   72 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence            48999996 9999999999998     799999999876431  11124688999999999888876 6777765554

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.51  E-value=0.0067  Score=56.10  Aligned_cols=71  Identities=11%  Similarity=0.055  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCC---CCC------CC-CCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRP---KPN------WN-ADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~---~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .+++++|+|| |-+|++++..|.+     .|++ |++++|+.   ...      +. ....+.+..+|+.+.+++.+.+.
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~-----~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCAL-----DGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc
Confidence            4579999998 8999999999998     7875 99999975   111      10 01234456788888877877778


Q ss_pred             cCCCeeEE
Q 016047           93 QLTDVTHI  100 (396)
Q Consensus        93 ~~~~V~h~  100 (396)
                      .+|.|+++
T Consensus       199 ~~DilINa  206 (289)
T PRK12548        199 SSDILVNA  206 (289)
T ss_pred             cCCEEEEe
Confidence            78877775

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.46  E-value=0.034  Score=51.89  Aligned_cols=105  Identities=13%  Similarity=0.037  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEE-ecCCChHHHHHHHhc
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQ-CDVSDPEETQAKLSQ   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~-~Dl~d~~~~~~~~~~   93 (396)
                      .+||.|+|+ |++|+.++..|+....   .-++..++.+....          ........+.. +|   .    +.+++
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~---~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~d---y----~~~~~   71 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGL---ADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKD---Y----SVTAN   71 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCC---CCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCC---H----HHhCC
Confidence            359999995 9999999999987332   23799998765321          00001112222 22   2    23788


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +|.|+-+|+....+..+..+.+..|+.-.+.+.+.+++.+++-..++
T Consensus        72 adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~viv  118 (312)
T cd05293          72 SKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLV  118 (312)
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            99877777654333336778889999999999999999876554433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.45  E-value=0.021  Score=50.95  Aligned_cols=110  Identities=15%  Similarity=0.111  Sum_probs=71.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-C--CCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-W--NADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~--~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      +...||.|.||.|-||..|...|..+|.++   +....+-...+- .  ..+=+-........-++.+.+++.++|.|+-
T Consensus        26 ~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs---~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvI  102 (345)
T KOG1494|consen   26 QRGLKVAVLGAAGGIGQPLSLLLKLNPLVS---ELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVI  102 (345)
T ss_pred             cCcceEEEEecCCccCccHHHHHhcCcccc---eeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEe
Confidence            345799999999999999988887766554   333333221110 0  0000111122333345689999999998777


Q ss_pred             EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047          100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  135 (396)
Q Consensus       100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  135 (396)
                      -|+...-+.-..+++|++|..-.+.|..++.+..++
T Consensus       103 PAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~  138 (345)
T KOG1494|consen  103 PAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPN  138 (345)
T ss_pred             cCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCcc
Confidence            665433333367899999999999999999988654

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.45  E-value=0.0065  Score=48.50  Aligned_cols=69  Identities=22%  Similarity=0.312  Sum_probs=40.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEE-EeCCCCCCCCCC----CCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRPKPNWNAD----HLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~~~~~~~~----~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ++|.|.|++|.+|+.+++.+.+.    .++++.+ ++|++......+    .++.  ...+.-.+++++++..+|.|+..
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~----~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDf   74 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILES----PGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDF   74 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHS----TTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc----CCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEc
Confidence            48999999999999999999975    5788544 455542211000    0000  11111124567777778877776

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.43  E-value=0.0068  Score=48.15  Aligned_cols=34  Identities=29%  Similarity=0.375  Sum_probs=26.7

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEE-EEEeCCC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKV-YGVARRP   64 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V-~~l~R~~   64 (396)
                      ||.|+||||++|..|++.|.+.+    .+++ .++.++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp----~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHP----DFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTS----TEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCC----CccEEEeeeecc
Confidence            69999999999999999999853    4564 4455554

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.42  E-value=0.024  Score=54.25  Aligned_cols=106  Identities=16%  Similarity=0.061  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEE--eCCCCCC----------C-CCCCCeeEEEecCCChHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGV--ARRPKPN----------W-NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l--~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      +.||.|+||+|++|++++..|.........  ..++.+  +++.+..          . +...++.+..+|       .+
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~-------y~  116 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP-------YE  116 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC-------HH
Confidence            479999999999999999999873221100  123333  5443221          0 001122222222       35


Q ss_pred             HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcc
Q 016047           90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLR  137 (396)
Q Consensus        90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~  137 (396)
                      .++++|.|+-.|+....+..+..+.+..|+.-.+.+.+.+.++. +..+
T Consensus       117 ~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~i  165 (387)
T TIGR01757       117 VFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCK  165 (387)
T ss_pred             HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence            68899988888775444444778889999999999999998854 4433

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.31  E-value=0.009  Score=54.47  Aligned_cols=107  Identities=14%  Similarity=0.034  Sum_probs=70.4

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCC----cEEEEEeCCCCCCCC------CCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGP----WKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g----~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      |.|+||+|.+|..++..|+.     .|    .+|+.++++......      ...... ....+.-.+++.++++++|.|
T Consensus         1 I~IIGagG~vG~~ia~~l~~-----~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~~~~~~aDiV   74 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLAD-----GSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPYEAFKDADVV   74 (263)
T ss_pred             CEEECCCChHHHHHHHHHHh-----CCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchHHHhCCCCEE
Confidence            57999999999999999987     45    589999987533200      000000 011111122356778999988


Q ss_pred             eEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           98 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        98 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +-.++..........+....|+.-.+.+.+.+++.+++...++
T Consensus        75 v~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~  117 (263)
T cd00650          75 IITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIV  117 (263)
T ss_pred             EECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            8776644333345667788899999999999998876554443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=96.23  E-value=0.016  Score=51.10  Aligned_cols=79  Identities=20%  Similarity=0.181  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCC--CCCeeEEEecCCChHHHHHH--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNA--DHLVEYVQCDVSDPEETQAK--   90 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~--~~~v~~~~~Dl~d~~~~~~~--   90 (396)
                      |.|-+||||++..||-.++.+|++......-..+....|.-++.         ...  .-.++++.+|+++..++..+  
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            56788999999999999999999732111112344455654321         112  23567899999998765444  


Q ss_pred             -----HhcCCCeeEEEE
Q 016047           91 -----LSQLTDVTHIFY  102 (396)
Q Consensus        91 -----~~~~~~V~h~a~  102 (396)
                           ++..|.|+-.|+
T Consensus        82 di~~rf~~ld~iylNAg   98 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAG   98 (341)
T ss_pred             HHHHHhhhccEEEEccc
Confidence                 444554554444

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.23  E-value=0.0049  Score=65.88  Aligned_cols=76  Identities=29%  Similarity=0.195  Sum_probs=54.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCC---------CCcEEEEEeCCCCCC--C-CCCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPG---------GPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~---------~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .++|+|.| +|++|+..++.|.+.+...         .+..|++.++.....  . ...++++.+..|+.|.+++.++++
T Consensus       569 ~~rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~  647 (1042)
T PLN02819        569 SQNVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS  647 (1042)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence            47999999 5999999999998743210         012377777664321  0 011367789999999999999989


Q ss_pred             cCCCeeEEE
Q 016047           93 QLTDVTHIF  101 (396)
Q Consensus        93 ~~~~V~h~a  101 (396)
                      ++|.|+.+.
T Consensus       648 ~~DaVIsal  656 (1042)
T PLN02819        648 QVDVVISLL  656 (1042)
T ss_pred             CCCEEEECC
Confidence            999877763

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.20  E-value=0.016  Score=54.28  Aligned_cols=102  Identities=15%  Similarity=0.087  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCCCC---------CCCCe-eEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWN---------ADHLV-EYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~~---------~~~~v-~~~~~Dl~d~~~~~~~~~   92 (396)
                      ..+||.|+|| |.+|+.++..|..     .| .+|+.++++......         ...+. ..+.+    ..+.+ +++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~-----~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~----~~d~~-~l~   72 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQ-----KNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG----TNNYE-DIK   72 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHH-----CCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe----CCCHH-HhC
Confidence            3569999996 9999999998887     55 579999986532100         00010 01111    11233 678


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      ++|.|+-+++.......+..+.+..|..-.+.+.+.+.+.+++-
T Consensus        73 ~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a  116 (319)
T PTZ00117         73 DSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNA  116 (319)
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            99988887764433334567788899998999999888876544

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.11  E-value=0.019  Score=52.11  Aligned_cols=65  Identities=15%  Similarity=0.190  Sum_probs=42.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ++|.|+|++|.+|+.+++.+.+.    .++++.++. +.+.....    .  -..++...+++++++.++|.|+++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~----~~~elvav~d~~~~~~~~----~--~~~~i~~~~dl~~ll~~~DvVid~   67 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAA----EDLELVAAVDRPGSPLVG----Q--GALGVAITDDLEAVLADADVLIDF   67 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEecCCccccc----c--CCCCccccCCHHHhccCCCEEEEC
Confidence            58999999999999999998863    467866654 44332110    0  122333334566666678877776

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.08  E-value=0.059  Score=50.33  Aligned_cols=98  Identities=20%  Similarity=0.151  Sum_probs=67.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC------CCC----CCCeeEEEecCCChHHHHHHHhc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN------WNA----DHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~------~~~----~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      ++|.|.|+ |.+|..++..|..     .|  .+|.+++++....      ...    .....+..+   +    .+.+++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~-----~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d----~~~l~~   67 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLL-----RGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D----YADCKG   67 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHH-----cCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C----HHHhCC
Confidence            47999996 9999999999988     56  5899999875321      000    011122222   2    235789


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      +|.|+-+++.......+..+....|+.-.+.+.+.+++.+++-
T Consensus        68 aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~g  110 (308)
T cd05292          68 ADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDA  110 (308)
T ss_pred             CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            9988877665443334667788999999999999888876543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.01  E-value=0.021  Score=53.24  Aligned_cols=104  Identities=13%  Similarity=0.086  Sum_probs=65.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      +||.|.|+ |++|..++..|..     .|+ +|++++.......      ..........+.+.-..+..+ +.++|.|+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~-----~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVI   74 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAE-----KELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVV   74 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHH-----cCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEE
Confidence            58999995 9999999999987     666 8999998543210      000000000011110112233 67888777


Q ss_pred             EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      -+++.......+..+.+..|+.-.+.+++.+.++.++.
T Consensus        75 itag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~  112 (305)
T TIGR01763        75 ITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNP  112 (305)
T ss_pred             EcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            77664332223566788899999999999888876543

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.87  E-value=0.016  Score=54.78  Aligned_cols=65  Identities=20%  Similarity=0.114  Sum_probs=41.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc---EEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW---KVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ++|+|.||||++|..|++.|.+     .+|   ++..+.+..... .....+.+....|+.+.     .+.++|.||-+
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~-----~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A   70 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEE-----RNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFS   70 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEEC
Confidence            5899999999999999999988     455   457787654321 11112234444555432     34678866644

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.84  E-value=0.023  Score=53.12  Aligned_cols=103  Identities=19%  Similarity=0.190  Sum_probs=64.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC---C--CCC-CeeEEEecCCChHHHHHHHhcCCCee
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW---N--ADH-LVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~---~--~~~-~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      +||.|+|| |.+|+.++..|..     .|. +|+++++.+....   .  .+. ......+.+....+. +.+.++|.|+
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~-----~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVi   75 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLAL-----KELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVV   75 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEE
Confidence            69999997 9999999999987     554 8999998653220   0  000 000000111111122 3578899877


Q ss_pred             EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047           99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  135 (396)
Q Consensus        99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  135 (396)
                      -+++.......+..+....|+.-.+.+++.+.+..++
T Consensus        76 i~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~  112 (307)
T PRK06223         76 ITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPD  112 (307)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            7765433222355667788999988898888877644

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.79  E-value=0.014  Score=55.27  Aligned_cols=36  Identities=25%  Similarity=0.287  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      |.++|+|.||||++|..+++.|.+.    .+++++++.++
T Consensus         1 ~m~kVaIiGAtG~vG~~l~~~L~~~----p~~elv~v~~~   36 (343)
T PRK00436          1 MMIKVGIVGASGYTGGELLRLLLNH----PEVEIVAVTSR   36 (343)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHcC----CCceEEEEECc
Confidence            3479999999999999999999974    36788777764

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.65  E-value=0.14  Score=47.99  Aligned_cols=99  Identities=13%  Similarity=0.101  Sum_probs=67.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC-----------CCCCCeeEEE-ecCCChHHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-----------NADHLVEYVQ-CDVSDPEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~-----------~~~~~v~~~~-~Dl~d~~~~~~~~   91 (396)
                      .+||.|+| +|.+|+.++..|..     .|. +|+.++.++....           ......++.. .|      . +++
T Consensus         6 ~~KI~IIG-aG~vG~~ia~~la~-----~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d------~-~~l   72 (321)
T PTZ00082          6 RRKISLIG-SGNIGGVMAYLIVL-----KNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNN------Y-EDI   72 (321)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHh-----CCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCC------H-HHh
Confidence            36999999 69999999998887     564 7999998765220           0011122221 22      2 357


Q ss_pred             hcCCCeeEEEEeccCCCc-----cHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           92 SQLTDVTHIFYVTWTNRS-----TEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~-----~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      +++|.|+..++.......     +..+....|+.-.+.+++.+.+.+++-
T Consensus        73 ~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a  122 (321)
T PTZ00082         73 AGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNA  122 (321)
T ss_pred             CCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence            899988888765433222     456677889998999999888876543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.58  E-value=0.018  Score=56.96  Aligned_cols=68  Identities=19%  Similarity=0.057  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      ++|+|+|+|+++ +|..+++.|++     .|++|++.++......      ....+++++.+|..+     +...++|.|
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~-----~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~v   72 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKK-----LGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLV   72 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEE
Confidence            358999999877 99999999999     8999999998752211      112357788888765     235667877


Q ss_pred             eEEEE
Q 016047           98 THIFY  102 (396)
Q Consensus        98 ~h~a~  102 (396)
                      ++.++
T Consensus        73 v~~~g   77 (450)
T PRK14106         73 VVSPG   77 (450)
T ss_pred             EECCC
Confidence            77644

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.57  E-value=0.021  Score=54.89  Aligned_cols=47  Identities=23%  Similarity=0.351  Sum_probs=37.2

Q ss_pred             ccccccccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047            9 IGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      .+.+.+|.+..|   ..++|.|.||.|.+|..++..|.+     .||+|++.+|+
T Consensus        85 ~q~~~~~~~~~~---~~~~I~IiGG~GlmG~slA~~l~~-----~G~~V~~~d~~  131 (374)
T PRK11199         85 SENDKGFKTLNP---DLRPVVIVGGKGQLGRLFAKMLTL-----SGYQVRILEQD  131 (374)
T ss_pred             HhHHhcccccCc---ccceEEEEcCCChhhHHHHHHHHH-----CCCeEEEeCCC
Confidence            344445653333   447899999999999999999998     79999999985

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.55  E-value=0.02  Score=58.22  Aligned_cols=69  Identities=20%  Similarity=0.089  Sum_probs=52.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTD   96 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~   96 (396)
                      +.++.+|+|.| .|-+|+++++.|.+     +|++|++++.+++.. ...+.+.+.+.||.+|++.++++ ++++|.
T Consensus       414 ~~~~~hiiI~G-~G~~G~~la~~L~~-----~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~  484 (558)
T PRK10669        414 VDICNHALLVG-YGRVGSLLGEKLLA-----AGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARW  484 (558)
T ss_pred             cccCCCEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCE
Confidence            45567999999 89999999999998     799999999876432 11234788999999999887652 344443

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.40  E-value=0.11  Score=48.37  Aligned_cols=99  Identities=14%  Similarity=0.015  Sum_probs=66.3

Q ss_pred             EEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           30 IVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        30 VtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      |.| +|++|+.++..|...+..   -++..+++.....           .+...++.+..+   +    .+.++++|.|+
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~daDivV   69 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIA---DEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSG---D----YSDCKDADLVV   69 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCC---CEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecC---C----HHHHCCCCEEE
Confidence            456 599999999999874322   2799999865321           111122333222   2    35688999888


Q ss_pred             EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047           99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus        99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                      -.|+....+..+..+.+..|+.-.+.+.+.+++++++...+
T Consensus        70 itag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vi  110 (299)
T TIGR01771        70 ITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFL  110 (299)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence            87775443434678889999999999999999887654433

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.33  E-value=0.14  Score=47.67  Aligned_cols=101  Identities=17%  Similarity=0.077  Sum_probs=68.6

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      |.|.| +|.+|+.++..|+.     .|  .++++++++....          ........+..+  .+    .+.+.++|
T Consensus         1 i~iiG-aG~VG~~~a~~l~~-----~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aD   68 (300)
T cd00300           1 ITIIG-AGNVGAAVAFALIA-----KGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADAD   68 (300)
T ss_pred             CEEEC-CCHHHHHHHHHHHh-----cCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCC
Confidence            46888 58999999999987     45  5899999875421          000011222221  11    34688999


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      .|+-+++.......+..+....|+.-.+.+.+.+++++++...++
T Consensus        69 iVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv  113 (300)
T cd00300          69 IVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILV  113 (300)
T ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            888887754433446788889999999999999998875544333

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=95.23  E-value=0.03  Score=48.85  Aligned_cols=169  Identities=14%  Similarity=0.099  Sum_probs=79.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEE--EEeCCCCCCCC-------CCCCee-EEEecCCChHHHHHHHhcC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVY--GVARRPKPNWN-------ADHLVE-YVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~--~l~R~~~~~~~-------~~~~v~-~~~~Dl~d~~~~~~~~~~~   94 (396)
                      +-+||||||+|.||.+|+-.+.+-.-......|+  .++-.+.....       .+.-+. ...++.+.  +-..+++++
T Consensus         4 pirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvatt--d~~~afkdv   81 (332)
T KOG1496|consen    4 PIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATT--DEVEAFKDV   81 (332)
T ss_pred             ceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhccc--ChhhhhccC
Confidence            3589999999999999999988610000001122  22211111000       000000 01111111  123567777


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      +..+-+.+......-...++...|+.-.+.--.+..++ .+.++-++ ++      -+      ...+.....+..|..|
T Consensus        82 ~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlV-Vg------NP------aNTNali~~k~ApsIP  148 (332)
T KOG1496|consen   82 DVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLV-VG------NP------ANTNALILKKFAPSIP  148 (332)
T ss_pred             cEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEE-ec------Cc------cccchhHHhhhCCCCc
Confidence            76555544322222256777888887766655666665 33344333 21      11      0001112333344334


Q ss_pred             CCCcc----hhHHHHHHHHhhcCCCeeEEEEcCCceeecC
Q 016047          174 APNFY----YTLEDILFEEVEKKEELSWSVHRPDTIFGFS  209 (396)
Q Consensus       174 ~~~~~----y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~  209 (396)
                      ..++.    ....+.+.+.. ...|.++.-+.--.|+|..
T Consensus       149 ~kNfs~lTRLDhNRA~~QlA-~klgv~~~~VkNviIWGNH  187 (332)
T KOG1496|consen  149 EKNFSALTRLDHNRALAQLA-LKLGVPVSDVKNVIIWGNH  187 (332)
T ss_pred             hhcchhhhhhchhhHHHHHH-HhhCCchhhcceeEEeccc
Confidence            33321    11244444443 4567777777766777843

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.21  E-value=0.023  Score=50.24  Aligned_cols=35  Identities=26%  Similarity=0.151  Sum_probs=31.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |+|.|+||+|.+|+.++..|.+     .||+|++.+|++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~-----~G~~V~v~~r~~~   35 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAK-----AGNKIIIGSRDLE   35 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHh-----CCCEEEEEEcCHH
Confidence            4799999999999999999998     7899999998763

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.15  E-value=0.028  Score=53.47  Aligned_cols=37  Identities=24%  Similarity=0.341  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |+++|+|+||||++|+.|++.|.+.    ...+++++.++.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~----p~~el~~~~~s~   38 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANH----PWFEVTALAASE   38 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcC----CCceEEEEEcCh
Confidence            4579999999999999999999974    234788885543

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.89  E-value=0.047  Score=55.95  Aligned_cols=71  Identities=14%  Similarity=0.109  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~  100 (396)
                      .+.+|+|.| .|-+|+.+++.|.+     +|++|++++++++.. .....+..++.||.++++.++++ +.+++.|+-+
T Consensus       399 ~~~~vII~G-~Gr~G~~va~~L~~-----~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        399 DKPQVIIVG-FGRFGQVIGRLLMA-----NKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             ccCCEEEec-CchHHHHHHHHHHh-----CCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence            346899999 89999999999998     799999999887532 11224678999999999988763 4455544443

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=94.76  E-value=0.18  Score=45.33  Aligned_cols=93  Identities=18%  Similarity=0.087  Sum_probs=61.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-CCC-C-CCCCCeeEEEecCCChHHHHHHHhc--CCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN-W-NADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~-~-~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~  100 (396)
                      |+|||.|||+= |+.|++.|.+     .|+ |+.-+-.+ ... . .....++++.|-+.+.+.+.+.++.  ++.|+..
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~-----~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDA   73 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAE-----AGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDA   73 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHh-----cCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEEC
Confidence            68999999998 9999999999     777 44333221 111 1 1224667888888899999988864  4445555


Q ss_pred             EEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047          101 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH  138 (396)
Q Consensus       101 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~  138 (396)
                         +++..          ..-++|+.++|++.+....+
T Consensus        74 ---THPfA----------~~is~na~~a~~~~~ipylR   98 (249)
T PF02571_consen   74 ---THPFA----------AEISQNAIEACRELGIPYLR   98 (249)
T ss_pred             ---CCchH----------HHHHHHHHHHHhhcCcceEE
Confidence               22221          13456789999988643333

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK10537 voltage-gated potassium channel; Provisional

Probab=94.76  E-value=0.17  Score=48.85  Aligned_cols=68  Identities=10%  Similarity=-0.015  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHH-HHhcCCCeeE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQA-KLSQLTDVTH   99 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~h   99 (396)
                      +.+|+|.| .|-+|..++++|.+     +|++|++++.+.... ....+..++.||.+|++.+++ -+++++.|+-
T Consensus       240 k~HvII~G-~g~lg~~v~~~L~~-----~g~~vvVId~d~~~~-~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~  308 (393)
T PRK10537        240 KDHFIICG-HSPLAINTYLGLRQ-----RGQAVTVIVPLGLEH-RLPDDADLIPGDSSDSAVLKKAGAARARAILA  308 (393)
T ss_pred             CCeEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECchhhh-hccCCCcEEEeCCCCHHHHHhcCcccCCEEEE
Confidence            46899999 68899999999987     788888888653221 122467899999999988765 3445554443

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.75  E-value=0.096  Score=44.10  Aligned_cols=55  Identities=20%  Similarity=0.153  Sum_probs=43.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ...+++|||+|+.+.+|..+++.|.+     .|.+|+.+.|..                    +++.+.+..+|.|+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~-----~g~~V~v~~r~~--------------------~~l~~~l~~aDiVIsat   95 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLN-----RNATVTVCHSKT--------------------KNLKEHTKQADIVIVAV   95 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhh-----CCCEEEEEECCc--------------------hhHHHHHhhCCEEEEcC
Confidence            34568999999877789999999998     788898888752                    34667888899777663

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.74  E-value=0.036  Score=54.77  Aligned_cols=69  Identities=20%  Similarity=0.202  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC-CCCCeeEEEecCCChHHHHH-HHhcCCCee
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQA-KLSQLTDVT   98 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~   98 (396)
                      ..++|+|.|+ |.+|..+++.|.+     .|++|+++++++...  .. ...++.++.||.++++.+.+ .+..++.|+
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~-----~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi  302 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEK-----EGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFI  302 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence            3579999995 9999999999998     799999999886431  10 11367789999999988754 334555444

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=94.73  E-value=0.25  Score=43.23  Aligned_cols=104  Identities=16%  Similarity=0.132  Sum_probs=65.5

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC--CC---C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN---W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~--~~---~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|++||+|-  .--|+..+++.|.+     .|.++......+.  +.   . .....--+++||+++.+++++.+.   
T Consensus         5 ~GK~~lI~Gvan~rSIAwGIAk~l~~-----~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           5 EGKRILIMGVANNRSIAWGIAKALAE-----QGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             CCceEEEEEecccccHHHHHHHHHHH-----cCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHH
Confidence            4689999996  56799999999999     8888654443321  00   0 011123478999999987766554   


Q ss_pred             ----cCCCeeEEEEeccCCC------c----cHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 ----QLTDVTHIFYVTWTNR------S----TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~----~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                          ..|.++|+.+.+.-..      +    .....+++-..+...+.++++..
T Consensus        80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~l  133 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPL  133 (259)
T ss_pred             HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHh
Confidence                4677999987543110      0    12233455555666666666655

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=94.72  E-value=0.088  Score=51.72  Aligned_cols=73  Identities=12%  Similarity=0.026  Sum_probs=50.1

Q ss_pred             CCCCCEEEEEcC----------------CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH
Q 016047           22 RSYQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE   85 (396)
Q Consensus        22 ~~~~~~iLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~   85 (396)
                      +-.+++||||+|                ||-.|..|++++..     +|.+|+.+.-...  .....+++++.++  ..+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~-----~GA~VtlI~Gp~~--~~~p~~v~~i~V~--ta~  323 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAA-----AGAEVTLISGPVD--LADPQGVKVIHVE--SAR  323 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHH-----CCCcEEEEeCCcC--CCCCCCceEEEec--CHH
Confidence            356789999986                79999999999999     8999998873322  1122467766554  344


Q ss_pred             HHHHHHh---cCCCeeEEEEe
Q 016047           86 ETQAKLS---QLTDVTHIFYV  103 (396)
Q Consensus        86 ~~~~~~~---~~~~V~h~a~~  103 (396)
                      ++.+++.   ..|.+++.|+.
T Consensus       324 eM~~av~~~~~~Di~I~aAAV  344 (475)
T PRK13982        324 QMLAAVEAALPADIAIFAAAV  344 (475)
T ss_pred             HHHHHHHhhCCCCEEEEeccc
Confidence            4433332   25778888764

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.65  E-value=0.014  Score=45.84  Aligned_cols=66  Identities=27%  Similarity=0.357  Sum_probs=46.8

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHH-HHhcCCCeeE
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQA-KLSQLTDVTH   99 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~h   99 (396)
                      |+|.| .|-+|..+++.|.+     ++.+|+++++++... .....+++++.||.++++.+++ -+..++.|+-
T Consensus         1 vvI~G-~g~~~~~i~~~L~~-----~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~   68 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKE-----GGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVI   68 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHH-----TTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEE
T ss_pred             eEEEc-CCHHHHHHHHHHHh-----CCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEE
Confidence            67888 57899999999998     677999999986421 0112468899999999998876 3344443433

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=94.62  E-value=0.058  Score=51.01  Aligned_cols=64  Identities=17%  Similarity=0.109  Sum_probs=39.2

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEE---EEEeCCCCC-CCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKV---YGVARRPKP-NWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V---~~l~R~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      +|+|.||||++|..|++.|.+     ++|.+   ..+.+.... ......+.+....|+. .    ..+.++|.|+-+
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~-----~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-~----~~~~~~D~v~~a   68 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEE-----RNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-I----ESFEGIDIALFS   68 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHh-----CCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-h----HHhcCCCEEEEC
Confidence            589999999999999999987     56653   344454322 1111123445556653 1    235677765554

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.57  E-value=0.13  Score=49.92  Aligned_cols=69  Identities=14%  Similarity=0.091  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h   99 (396)
                      ..|+|||+| +|.+|..++..+.+     .|++|++++..+........ -.++.+|..|.+.+.+.++  ++|.|+-
T Consensus        11 ~~~~ilIiG-~g~~~~~~~~a~~~-----~G~~v~~~~~~~~~~~~~~a-d~~~~~~~~d~~~l~~~~~~~~id~vi~   81 (395)
T PRK09288         11 SATRVMLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQVA-HRSHVIDMLDGDALRAVIEREKPDYIVP   81 (395)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCchHHhh-hheEECCCCCHHHHHHHHHHhCCCEEEE
Confidence            346999999 68999999999888     79999999987643211000 1256788889988888777  5665443

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.54  E-value=0.13  Score=47.97  Aligned_cols=64  Identities=23%  Similarity=0.206  Sum_probs=46.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ..+++|.|.| .|.||+.+++.|..     .|++|++.+|.....    +++..+    ...+++.++++.+|.|+.+
T Consensus       134 l~g~tvgIvG-~G~IG~~vA~~l~a-----fG~~V~~~~~~~~~~----~~~~~~----~~~~~l~e~l~~aDvvv~~  197 (312)
T PRK15469        134 REDFTIGILG-AGVLGSKVAQSLQT-----WGFPLRCWSRSRKSW----PGVQSF----AGREELSAFLSQTRVLINL  197 (312)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCC----CCceee----cccccHHHHHhcCCEEEEC
Confidence            3568999999 99999999999998     899999999854321    122211    1345688899999974433

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=94.50  E-value=0.048  Score=51.81  Aligned_cols=34  Identities=24%  Similarity=0.284  Sum_probs=27.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARR   63 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~   63 (396)
                      ++|.|.||||++|..+++.|.+.    .++++..+ +++
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~h----P~~el~~l~~s~   35 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNH----PEVEITYLVSSR   35 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC----CCceEEEEeccc
Confidence            47999999999999999999974    35677744 543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=94.41  E-value=0.086  Score=49.89  Aligned_cols=23  Identities=39%  Similarity=0.553  Sum_probs=21.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPL   47 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~   47 (396)
                      +.+|.|.||||++|..|++.|.+
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~   29 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTD   29 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHh
Confidence            46899999999999999999987

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=94.36  E-value=0.13  Score=49.53  Aligned_cols=65  Identities=20%  Similarity=0.128  Sum_probs=50.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      ++|+|.|+ |.+|..++..+.+     .|++|++++..+......- --+++.+|..|.+.+.++.+.+|.|
T Consensus         3 ~~igilG~-Gql~~ml~~aa~~-----lG~~v~~~d~~~~~pa~~~-ad~~~~~~~~D~~~l~~~a~~~dvi   67 (372)
T PRK06019          3 KTIGIIGG-GQLGRMLALAAAP-----LGYKVIVLDPDPDSPAAQV-ADEVIVADYDDVAALRELAEQCDVI   67 (372)
T ss_pred             CEEEEECC-CHHHHHHHHHHHH-----cCCEEEEEeCCCCCchhHh-CceEEecCCCCHHHHHHHHhcCCEE
Confidence            68999995 8999999999998     8999999998654321100 1136678999999999999988854

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.03  E-value=0.083  Score=54.32  Aligned_cols=71  Identities=13%  Similarity=0.083  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHH-HHhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQA-KLSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V~h~  100 (396)
                      ...+|+|.| .|-+|+.+++.|.+     +|+++++++.++... .....+.+++.||.++++.+++ -++.++.|+-+
T Consensus       399 ~~~~vII~G-~Gr~G~~va~~L~~-----~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~  471 (621)
T PRK03562        399 QQPRVIIAG-FGRFGQIVGRLLLS-----SGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA  471 (621)
T ss_pred             ccCcEEEEe-cChHHHHHHHHHHh-----CCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence            356899999 88999999999998     799999999887532 1122467899999999998765 33445544443

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=94.00  E-value=0.24  Score=44.28  Aligned_cols=37  Identities=16%  Similarity=0.198  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPK   65 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~   65 (396)
                      .++|.|.||+|-.|+.+++.+.+.    .+++ +-+++|.+.
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~----~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEA----PDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcC----CCceEEEEEecCCc
Confidence            468999999999999999999985    4566 556667654

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=93.99  E-value=0.5  Score=43.93  Aligned_cols=96  Identities=19%  Similarity=0.168  Sum_probs=62.3

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC------C-----CCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW------N-----ADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~------~-----~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      |.|+|| |.+|..++..|..     .|. +|+++++++....      .     ...... +... .|    .+.++++|
T Consensus         1 I~IIGa-G~vG~~ia~~la~-----~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~t-~d----~~~l~dAD   68 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLAL-----KELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTGT-ND----YEDIAGSD   68 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHh-----CCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEEc-CC----HHHhCCCC
Confidence            578997 9999999998887     555 9999998754210      0     000111 1110 12    23578999


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  135 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  135 (396)
                      .|+-+++.......+..+....|+.-.+.+++.+.+..++
T Consensus        69 iVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~  108 (300)
T cd01339          69 VVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPN  108 (300)
T ss_pred             EEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            8888776433333345566778998888888888887643

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=93.93  E-value=0.061  Score=50.70  Aligned_cols=22  Identities=41%  Similarity=0.564  Sum_probs=21.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPL   47 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~   47 (396)
                      .+|+|+||||++|..|++.|.+
T Consensus         5 ~~IaIvGATG~vG~eLlrlL~~   26 (336)
T PRK05671          5 LDIAVVGATGTVGEALVQILEE   26 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhh
Confidence            6899999999999999999996

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=93.85  E-value=0.13  Score=47.76  Aligned_cols=35  Identities=20%  Similarity=0.183  Sum_probs=28.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      |..||.|.||+|+.|..|++.|...|    ..+++..+.
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp----~ve~~~~ss   35 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHP----DVELILISS   35 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCC----CeEEEEeec
Confidence            34799999999999999999999864    346666654

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=93.74  E-value=0.52  Score=44.57  Aligned_cols=37  Identities=30%  Similarity=0.286  Sum_probs=30.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      --+.++|+|.| .|-+|+++++.|..     .|+ ++++++++.
T Consensus        21 ~L~~~~VlIiG-~GglGs~va~~La~-----aGvg~i~lvD~D~   58 (338)
T PRK12475         21 KIREKHVLIVG-AGALGAANAEALVR-----AGIGKLTIADRDY   58 (338)
T ss_pred             hhcCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCCc
Confidence            33467999999 57799999999998     687 688888864

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=93.71  E-value=0.33  Score=45.96  Aligned_cols=37  Identities=32%  Similarity=0.354  Sum_probs=30.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      .-+..+|+|.| .|.+|++++..|..     .|. +|++++++.
T Consensus        21 ~L~~~~VlVvG-~GglGs~va~~La~-----aGvg~i~lvD~D~   58 (339)
T PRK07688         21 KLREKHVLIIG-AGALGTANAEMLVR-----AGVGKVTIVDRDY   58 (339)
T ss_pred             HhcCCcEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEEeCCc
Confidence            33457999999 59999999999998     677 799999863

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=93.61  E-value=0.19  Score=48.47  Aligned_cols=66  Identities=15%  Similarity=0.096  Sum_probs=49.3

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTH   99 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h   99 (396)
                      ||+|.| +|.+|..++..+.+     .|++|++++..+......... +.+.+|..|++.+.+..+  ++|.|+.
T Consensus         1 kililG-~g~~~~~l~~aa~~-----~G~~v~~~d~~~~~~~~~~ad-~~~~~~~~d~~~l~~~~~~~~id~v~~   68 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQR-----LGVEVIAVDRYANAPAMQVAH-RSYVINMLDGDALRAVIEREKPDYIVP   68 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEeCCCCCchhhhCc-eEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence            589999 69999999999998     899999999876442111111 356678889998888777  5775543

This enzyme is an alternative to PurN (TIGR00639)

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=93.43  E-value=0.093  Score=49.23  Aligned_cols=72  Identities=22%  Similarity=0.261  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChH-HHHHHHhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPE-ETQAKLSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~-~~~~~~~~~~~V~h~  100 (396)
                      ++++||+.| +||+...+++.|.++    ...+|++.+|.-.+.  .....+++.+..|+.+++ .+++.++..|.|+.+
T Consensus         1 ~~~~vlllg-sg~v~~p~~d~ls~~----~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSL   75 (445)
T KOG0172|consen    1 TKKGVLLLG-SGFVSRPVADFLSRK----KDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISL   75 (445)
T ss_pred             CCcceEEec-CccccchHHHHHhhc----CCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeee
Confidence            357899999 999999999999985    445788777753221  222245889999999998 888888888876665

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=93.11  E-value=0.47  Score=38.25  Aligned_cols=33  Identities=30%  Similarity=0.343  Sum_probs=27.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      +++|+|.| .|-+|+.+++.|..     .|. +++.++.+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~-----~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLAR-----SGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHH-----HTTSEEEEEESS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHH-----hCCCceeecCCc
Confidence            46899999 88899999999998     576 68888875

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=93.02  E-value=0.1  Score=45.03  Aligned_cols=35  Identities=29%  Similarity=0.304  Sum_probs=28.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      |++.|.| +|.||+.|+++|.+     .||+|+.-+|+.++
T Consensus         2 ~~~~i~G-tGniG~alA~~~a~-----ag~eV~igs~r~~~   36 (211)
T COG2085           2 MIIAIIG-TGNIGSALALRLAK-----AGHEVIIGSSRGPK   36 (211)
T ss_pred             cEEEEec-cChHHHHHHHHHHh-----CCCeEEEecCCChh
Confidence            3555555 99999999999999     89999988776543

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=93.02  E-value=0.059  Score=49.70  Aligned_cols=66  Identities=15%  Similarity=0.091  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .+++|+|+| .|.+|..+++.|..     .|.+|++.+|++.... ....+...     .+.+++.+.+.++|.|+.+
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~-----~G~~V~v~~R~~~~~~~~~~~g~~~-----~~~~~l~~~l~~aDiVint  216 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSA-----LGARVFVGARSSADLARITEMGLIP-----FPLNKLEEKVAEIDIVINT  216 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHCCCee-----ecHHHHHHHhccCCEEEEC
Confidence            468999999 58899999999998     7899999999764210 00011111     1234567778889977765

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=93.02  E-value=0.34  Score=49.35  Aligned_cols=68  Identities=13%  Similarity=0.038  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      .+.|+|+|.| +|.+|..++..+.+     .|++|++++.++........ -..+.+|..|.+.+.++.+.+|.|
T Consensus        20 ~~~k~IgIIG-gGqlg~mla~aA~~-----lG~~Vi~ld~~~~apa~~~A-D~~~v~~~~D~~~l~~~a~~~dvI   87 (577)
T PLN02948         20 VSETVVGVLG-GGQLGRMLCQAASQ-----MGIKVKVLDPLEDCPASSVA-ARHVVGSFDDRAAVREFAKRCDVL   87 (577)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCCchhhhC-ceeeeCCCCCHHHHHHHHHHCCEE
Confidence            4468999999 77999999999998     89999999887643211001 135568899999888888887754

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=92.83  E-value=0.17  Score=36.71  Aligned_cols=33  Identities=27%  Similarity=0.359  Sum_probs=29.5

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      +|+|.| +|++|..++..|.+     .|.+|+.+.|.+.
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~-----~g~~vtli~~~~~   33 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAE-----LGKEVTLIERSDR   33 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHH-----TTSEEEEEESSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHH-----hCcEEEEEeccch
Confidence            578888 89999999999998     7889999999754

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.80  E-value=0.22  Score=45.83  Aligned_cols=55  Identities=24%  Similarity=0.224  Sum_probs=44.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ..+|+|.|.|.+|.+|..++..|++     .|+.|++..|++.                    ++.+..+.+|.|+-+.+
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~-----~gatVtv~~~~t~--------------------~l~e~~~~ADIVIsavg  211 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQ-----AHCSVTVVHSRST--------------------DAKALCRQADIVVAAVG  211 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEECCCCC--------------------CHHHHHhcCCEEEEecC
Confidence            3578999999999999999999998     8999999876532                    25566788887766644

>PLN02928 oxidoreductase family protein

Probab=92.78  E-value=0.18  Score=47.89  Aligned_cols=71  Identities=17%  Similarity=0.110  Sum_probs=46.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCC-----CCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-----DHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      ...+++|.|.| .|-||+.+++.|..     .|.+|++.+|........     ...+..+........+++++++.+|.
T Consensus       156 ~l~gktvGIiG-~G~IG~~vA~~l~a-----fG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDi  229 (347)
T PLN02928        156 TLFGKTVFILG-YGAIGIELAKRLRP-----FGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADI  229 (347)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhh-----CCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCE
Confidence            34578999999 89999999999998     899999998863221000     00111111111134568889999996


Q ss_pred             ee
Q 016047           97 VT   98 (396)
Q Consensus        97 V~   98 (396)
                      |+
T Consensus       230 Vv  231 (347)
T PLN02928        230 VV  231 (347)
T ss_pred             EE
Confidence            33

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=92.74  E-value=0.2  Score=46.83  Aligned_cols=33  Identities=27%  Similarity=0.375  Sum_probs=30.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ++|.|.| +|.+|+.++..|.+     .||+|+..+|+.
T Consensus         5 m~I~iiG-~G~~G~~lA~~l~~-----~G~~V~~~~r~~   37 (308)
T PRK14619          5 KTIAILG-AGAWGSTLAGLASA-----NGHRVRVWSRRS   37 (308)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHH-----CCCEEEEEeCCC
Confidence            5899998 89999999999998     799999999864

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=92.70  E-value=0.27  Score=46.91  Aligned_cols=64  Identities=17%  Similarity=0.023  Sum_probs=48.4

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      +|+|.|+ |.+|..++..+.+     .|++|++++..+........ -+.+.+|..|++.+.+..+.+|.|
T Consensus         1 ~igiiG~-gql~~~l~~aa~~-----lG~~v~~~d~~~~~p~~~~a-d~~~~~~~~d~~~i~~~a~~~dvi   64 (352)
T TIGR01161         1 TVGILGG-GQLGRMLALAARP-----LGIKVHVLDPDANSPAVQVA-DHVVLAPFFDPAAIRELAESCDVI   64 (352)
T ss_pred             CEEEECC-CHHHHHHHHHHHH-----cCCEEEEECCCCCCChhHhC-ceeEeCCCCCHHHHHHHHhhCCEE
Confidence            4889995 8999999999998     89999999886543211001 124578899999999988888743

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=92.64  E-value=0.076  Score=49.24  Aligned_cols=66  Identities=18%  Similarity=0.086  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .+++|+|.| .|.+|..++..|..     .|.+|++++|++.... ....+.+++     ..+++.+.++++|.|+++
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~-----~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t  217 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKA-----LGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNT  217 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence            468999999 58899999999998     7889999999864310 001122222     234567778889988776

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=92.59  E-value=0.26  Score=46.15  Aligned_cols=65  Identities=22%  Similarity=0.152  Sum_probs=45.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      +..+|++.|.| .|-||+.+++.|..     -|.+|...+|.+.+...  .....-..+      ++++++.+|. ++||
T Consensus       143 ~l~gktvGIiG-~GrIG~avA~r~~~-----Fgm~v~y~~~~~~~~~~--~~~~~~y~~------l~ell~~sDii~l~~  208 (324)
T COG1052         143 DLRGKTLGIIG-LGRIGQAVARRLKG-----FGMKVLYYDRSPNPEAE--KELGARYVD------LDELLAESDIISLHC  208 (324)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhc-----CCCEEEEECCCCChHHH--hhcCceecc------HHHHHHhCCEEEEeC
Confidence            34579999999 99999999999996     78999999998642110  111111222      5678888986 5555

>PRK06849 hypothetical protein; Provisional

Probab=92.52  E-value=0.17  Score=48.94  Aligned_cols=36  Identities=17%  Similarity=0.102  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+|+|||||+...+|..+++.|.+     .|++|++++..+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~-----~G~~Vi~~d~~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHN-----AGHTVILADSLK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCc
Confidence            358999999999999999999999     899999998865

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=92.45  E-value=1.1  Score=38.83  Aligned_cols=34  Identities=26%  Similarity=0.188  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      +.++|+|.| .|-+|+.++..|..     .|+ +|++++++
T Consensus        20 ~~~~V~IvG-~GglGs~ia~~La~-----~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICG-LGGLGSNVAINLAR-----AGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEEC-cCHHHHHHHHHHHH-----cCCCEEEEECCC
Confidence            357999999 57799999999998     788 59999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.45  E-value=0.26  Score=45.16  Aligned_cols=55  Identities=16%  Similarity=0.171  Sum_probs=44.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ..+++|+|+|+++.+|..++..|.+     +|..|+.+.++.                    .++.+.++.+|.|+...+
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~-----~gatVtv~~s~t--------------------~~l~~~~~~ADIVIsAvg  210 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQ-----KNASVTILHSRS--------------------KDMASYLKDADVIVSAVG  210 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHHHhhCCEEEECCC
Confidence            3468999999999999999999998     788999887642                    246677888997776644

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=92.40  E-value=0.24  Score=46.09  Aligned_cols=36  Identities=17%  Similarity=0.236  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      |+.+|.|.||||++|..|++.|.+.+    ..++..+..+
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp----~~~l~~~~s~   36 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRS----DIELLSIPEA   36 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCC----CeEEEEEecC
Confidence            56799999999999999999999853    3366666644

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=92.31  E-value=0.22  Score=48.54  Aligned_cols=34  Identities=29%  Similarity=0.326  Sum_probs=30.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ++|.|.| .|++|..++..|.+     .||+|+++++++.
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~-----~G~~V~~~d~~~~   34 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLAD-----LGHEVTGVDIDQE   34 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHh-----cCCeEEEEECCHH
Confidence            3799998 89999999999998     8999999998754

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=92.27  E-value=0.33  Score=46.17  Aligned_cols=33  Identities=18%  Similarity=0.187  Sum_probs=25.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcE---EEEEeC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK---VYGVAR   62 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~---V~~l~R   62 (396)
                      ++|.|.||||++|..|++.|++.    ..+.   ++.++.
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~----~~f~~~~l~~~ss   37 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEE----NDFDLIEPVFFST   37 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhC----CCCCcCcEEEecc
Confidence            58999999999999999966653    3444   666654

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.20  E-value=0.34  Score=44.50  Aligned_cols=54  Identities=19%  Similarity=0.154  Sum_probs=42.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ..+++|+|.|++|.+|+.++..|++     .|..|+++.|+.                    .++.+.++++|.|+++.
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~-----~gatVtv~~~~t--------------------~~L~~~~~~aDIvI~At  210 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLN-----ANATVTICHSRT--------------------QNLPELVKQADIIVGAV  210 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHh-----CCCEEEEEeCCc--------------------hhHHHHhccCCEEEEcc
Confidence            3568999999999999999999998     677888887631                    23556678888877774

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=92.14  E-value=0.42  Score=44.65  Aligned_cols=62  Identities=19%  Similarity=0.074  Sum_probs=45.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      .-.+|+|.|.| .|.||+.+++.|..     -|.+|++.+|.....   ...+.        ..+++++++.+|. ++|+
T Consensus       142 ~L~gktvGIiG-~G~IG~~vA~~~~~-----fgm~V~~~d~~~~~~---~~~~~--------~~~l~ell~~sDvv~lh~  204 (311)
T PRK08410        142 EIKGKKWGIIG-LGTIGKRVAKIAQA-----FGAKVVYYSTSGKNK---NEEYE--------RVSLEELLKTSDIISIHA  204 (311)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhh-----cCCEEEEECCCcccc---ccCce--------eecHHHHhhcCCEEEEeC
Confidence            34579999999 89999999999987     789999999853221   11111        2357788999986 4554

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=92.08  E-value=0.14  Score=44.01  Aligned_cols=33  Identities=30%  Similarity=0.345  Sum_probs=26.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |+|.|.| .||+|..++-.|.+     .||+|++++.++
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~-----~G~~V~g~D~~~   33 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAE-----KGHQVIGVDIDE   33 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHH-----TTSEEEEE-S-H
T ss_pred             CEEEEEC-CCcchHHHHHHHHh-----CCCEEEEEeCCh
Confidence            5899998 99999999999999     899999999875

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=92.08  E-value=0.17  Score=49.73  Aligned_cols=35  Identities=31%  Similarity=0.368  Sum_probs=31.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |+|+|+||+|.+|..++..|.+     .|++|++++|++.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~-----~G~~V~v~~r~~~   35 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKE-----KGFEVIVTGRDPK   35 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHH-----CCCEEEEEECChH
Confidence            4799999999999999999998     7899999998754

>PRK13243 glyoxylate reductase; Reviewed

Probab=92.06  E-value=0.15  Score=48.16  Aligned_cols=62  Identities=18%  Similarity=0.154  Sum_probs=43.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      -.+++|.|.| .|.||+.+++.|..     .|++|++.+|.+........++     .   ..++.++++.+|.|+
T Consensus       148 L~gktvgIiG-~G~IG~~vA~~l~~-----~G~~V~~~d~~~~~~~~~~~~~-----~---~~~l~ell~~aDiV~  209 (333)
T PRK13243        148 VYGKTIGIIG-FGRIGQAVARRAKG-----FGMRILYYSRTRKPEAEKELGA-----E---YRPLEELLRESDFVS  209 (333)
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCCCChhhHHHcCC-----E---ecCHHHHHhhCCEEE
Confidence            4578999999 79999999999998     7999999998643211000011     1   124667788888633

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=91.96  E-value=1  Score=39.05  Aligned_cols=38  Identities=24%  Similarity=0.295  Sum_probs=30.2

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      ..-++.+|+|.|+.| +|+++++.|..     .|. +++.++.+.
T Consensus        15 ~~L~~s~VlviG~gg-lGsevak~L~~-----~GVg~i~lvD~d~   53 (198)
T cd01485          15 NKLRSAKVLIIGAGA-LGAEIAKNLVL-----AGIDSITIVDHRL   53 (198)
T ss_pred             HHHhhCcEEEECCCH-HHHHHHHHHHH-----cCCCEEEEEECCc
Confidence            334567999999777 99999999998     576 488888763

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PLN02712 arogenate dehydrogenase

Probab=91.93  E-value=0.24  Score=51.31  Aligned_cols=53  Identities=25%  Similarity=0.256  Sum_probs=43.7

Q ss_pred             cccccccccccccCcCC-----CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047            6 AGAIGAARKFEEDEPAR-----SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus         6 ~~~~~~~~~~~~~~~~~-----~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      -|..++++.|+.+.+..     .++++|.|.| .|.+|..+++.|.+     .|++|++.+|+.
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~kIgIIG-lG~mG~slA~~L~~-----~G~~V~~~dr~~  402 (667)
T PLN02712        345 MRFQGVAQKYEYNAQVSGCVNDGSKLKIAIVG-FGNFGQFLAKTMVK-----QGHTVLAYSRSD  402 (667)
T ss_pred             hhhhcccCCCCccchhhhccCCCCCCEEEEEe-cCHHHHHHHHHHHH-----CcCEEEEEECCh
Confidence            46788889888766542     2458999999 89999999999998     789999999874

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=91.91  E-value=0.25  Score=52.70  Aligned_cols=113  Identities=17%  Similarity=0.135  Sum_probs=76.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCCC---------CCCCCCee--EEEecCCChHHHHHHHhc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN---------WNADHLVE--YVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~---------~~~~~~v~--~~~~Dl~d~~~~~~~~~~   93 (396)
                      |..+|+||-|-.|-.|+.-|..     +|.+ ++..+|..-..         | ...+++  +-.-|++..+..+.++..
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~-----RGar~lVLtSRsGirtGYQa~~vrrW-r~~GVqV~vsT~nitt~~ga~~Li~~ 1842 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQ-----RGARKLVLTSRSGIRTGYQALMVRRW-RRRGVQVQVSTSNITTAEGARGLIEE 1842 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHh-----cCceEEEEeccccchhhHHHHHHHHH-HhcCeEEEEecccchhhhhHHHHHHH
Confidence            7899999999999999999999     7876 55555654321         2 123443  445666666655555555


Q ss_pred             CC------CeeEEEEeccC---C-C--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047           94 LT------DVTHIFYVTWT---N-R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        94 ~~------~V~h~a~~~~~---~-~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                      +.      .|||+|+.-..   . +  .+..+..+.-+.||.||=...++..+.+.+|+..||
T Consensus      1843 s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSS 1905 (2376)
T KOG1202|consen 1843 SNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSS 1905 (2376)
T ss_pred             hhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEe
Confidence            43      49999764221   1 1  144556678889999988888888777888775543

>PRK07877 hypothetical protein; Provisional

Probab=91.80  E-value=0.31  Score=50.66  Aligned_cols=43  Identities=21%  Similarity=0.209  Sum_probs=32.8

Q ss_pred             cccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCC
Q 016047           14 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARR   63 (396)
Q Consensus        14 ~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~   63 (396)
                      +|...+..--.+.+|+|.|. | +|++++..|..     .|.  ++++++.+
T Consensus        96 ~ig~~~Q~~L~~~~V~IvG~-G-lGs~~a~~Lar-----aGvvG~l~lvD~D  140 (722)
T PRK07877         96 KITAEEQERLGRLRIGVVGL-S-VGHAIAHTLAA-----EGLCGELRLADFD  140 (722)
T ss_pred             hCCHHHHHHHhcCCEEEEEe-c-HHHHHHHHHHH-----ccCCCeEEEEcCC
Confidence            45544444445689999998 8 99999999997     563  68888875

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=91.76  E-value=0.17  Score=47.25  Aligned_cols=33  Identities=21%  Similarity=0.361  Sum_probs=30.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ++|.|+| +|.+|+.++..|.+     .|++|++++|++
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~-----~G~~V~v~d~~~   35 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFAR-----AGHEVRLWDADP   35 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHH-----CCCeeEEEeCCH
Confidence            4799999 99999999999999     899999999975

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=91.66  E-value=0.29  Score=42.53  Aligned_cols=37  Identities=24%  Similarity=0.123  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ..+|+|+|+| .|.+|+++++.|.+     .|++|++.++++.
T Consensus        26 l~gk~v~I~G-~G~vG~~~A~~L~~-----~G~~Vvv~D~~~~   62 (200)
T cd01075          26 LEGKTVAVQG-LGKVGYKLAEHLLE-----EGAKLIVADINEE   62 (200)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEcCCHH
Confidence            3458999999 58999999999998     8999998887653

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=91.62  E-value=0.24  Score=46.93  Aligned_cols=33  Identities=21%  Similarity=0.390  Sum_probs=26.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      ++|.|+||||++|++|++.|.+.    ...+|..+.+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~----~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKH----PYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC----CCceEEEEEE
Confidence            47999999999999999999873    2357777743

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=91.61  E-value=0.48  Score=44.07  Aligned_cols=60  Identities=17%  Similarity=0.126  Sum_probs=43.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ...+++|.|.| .|.||+.+++.|..     .|++|++.+|....     .++...      ..+++++++.+|.|+
T Consensus       119 ~L~gktvgIiG-~G~IG~~vA~~l~a-----fG~~V~~~~r~~~~-----~~~~~~------~~~l~ell~~aDiv~  178 (303)
T PRK06436        119 LLYNKSLGILG-YGGIGRRVALLAKA-----FGMNIYAYTRSYVN-----DGISSI------YMEPEDIMKKSDFVL  178 (303)
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCCCcc-----cCcccc------cCCHHHHHhhCCEEE
Confidence            44579999999 89999999998876     79999999986432     121110      124677888898633

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=91.50  E-value=0.88  Score=45.82  Aligned_cols=98  Identities=8%  Similarity=0.036  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCC-CCC-----------CCCCCeeEEEecCCChHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPK-PNW-----------NADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~-~~~-----------~~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      ...+|+|.| .|-+|++++..|++     .|. ++++++-+.. .+.           .-++++.+-..|..+.+++.+.
T Consensus       128 R~akVlVlG-~Gg~~s~lv~sL~~-----sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev  201 (637)
T TIGR03693       128 RNAKILAAG-SGDFLTKLVRSLID-----SGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEA  201 (637)
T ss_pred             hcccEEEEe-cCchHHHHHHHHHh-----cCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHh
Confidence            557999999 66679999999998     565 4767754321 110           0135666667777788899999


Q ss_pred             HhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           91 LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        91 ~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +++.|.|++++-     ..        +...+..+.++|.+.+..+.-++
T Consensus       202 ~~~~DiVi~vsD-----dy--------~~~~Lr~lN~acvkegk~~IPai  238 (637)
T TIGR03693       202 FEPADWVLYVSD-----NG--------DIDDLHALHAFCKEEGKGFIPAI  238 (637)
T ss_pred             hcCCcEEEEECC-----CC--------ChHHHHHHHHHHHHcCCCeEEEE
Confidence            999998888732     11        11223346667777654444444

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>PLN02256 arogenate dehydrogenase

Probab=91.45  E-value=0.3  Score=45.43  Aligned_cols=54  Identities=28%  Similarity=0.273  Sum_probs=41.1

Q ss_pred             ccccccccccccccCcC-----CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047            5 WAGAIGAARKFEEDEPA-----RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus         5 ~~~~~~~~~~~~~~~~~-----~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +-|++.+++-|+-+.+-     ..+.++|.|.| .|.+|..++..|.+     .|++|++++|+.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIG-~G~mG~slA~~L~~-----~G~~V~~~d~~~   69 (304)
T PLN02256         11 RVRAIDAAQPFDYESRLQEELEKSRKLKIGIVG-FGNFGQFLAKTFVK-----QGHTVLATSRSD   69 (304)
T ss_pred             ccccccccCCCChHhHHhHhhccCCCCEEEEEe-eCHHHHHHHHHHHh-----CCCEEEEEECcc
Confidence            34667777777644322     22346999999 79999999999998     788999999875

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=91.45  E-value=0.3  Score=46.79  Aligned_cols=61  Identities=20%  Similarity=0.062  Sum_probs=43.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      -.+++|.|.| .|.||+.+++.|..     -|.+|++.++....     ..      +-....+++++++.+|. ++|+
T Consensus       114 L~gktvGIIG-~G~IG~~vA~~l~a-----~G~~V~~~dp~~~~-----~~------~~~~~~~L~ell~~sDiI~lh~  175 (378)
T PRK15438        114 LHDRTVGIVG-VGNVGRRLQARLEA-----LGIKTLLCDPPRAD-----RG------DEGDFRSLDELVQEADILTFHT  175 (378)
T ss_pred             cCCCEEEEEC-cCHHHHHHHHHHHH-----CCCEEEEECCcccc-----cc------cccccCCHHHHHhhCCEEEEeC
Confidence            4568999999 89999999999998     79999998753211     00      00112357778888986 4455

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=91.39  E-value=0.22  Score=47.19  Aligned_cols=35  Identities=20%  Similarity=0.217  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |.++|.|.| +|.+|+.++..|.+     .||+|++++|++
T Consensus         1 ~~mkI~IiG-~G~mG~~~A~~L~~-----~G~~V~~~~r~~   35 (341)
T PRK08229          1 MMARICVLG-AGSIGCYLGGRLAA-----AGADVTLIGRAR   35 (341)
T ss_pred             CCceEEEEC-CCHHHHHHHHHHHh-----cCCcEEEEecHH
Confidence            457899998 99999999999998     799999999864

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=91.35  E-value=0.69  Score=43.45  Aligned_cols=67  Identities=16%  Similarity=0.090  Sum_probs=51.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ++|.|.| .|.+|+-++.+-..     -|++|+.++-.++..... ---.++..+..|+++++++...||.|..
T Consensus         2 ~tvgIlG-GGQLgrMm~~aa~~-----lG~~v~vLdp~~~~PA~~-va~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           2 KTVGILG-GGQLGRMMALAAAR-----LGIKVIVLDPDADAPAAQ-VADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CeEEEEc-CcHHHHHHHHHHHh-----cCCEEEEecCCCCCchhh-cccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            6899999 89999999998887     799999999765432100 0114677888899999999999996443

>PRK06487 glycerate dehydrogenase; Provisional

Probab=91.33  E-value=0.37  Score=45.14  Aligned_cols=60  Identities=15%  Similarity=0.100  Sum_probs=44.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      ...+|+|.|.| .|.||+.+++.|..     -|.+|++.+|....     ....        ..+++++++.+|. ++|+
T Consensus       145 ~l~gktvgIiG-~G~IG~~vA~~l~~-----fgm~V~~~~~~~~~-----~~~~--------~~~l~ell~~sDiv~l~l  205 (317)
T PRK06487        145 ELEGKTLGLLG-HGELGGAVARLAEA-----FGMRVLIGQLPGRP-----ARPD--------RLPLDELLPQVDALTLHC  205 (317)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhh-----CCCEEEEECCCCCc-----cccc--------ccCHHHHHHhCCEEEECC
Confidence            34578999999 89999999999987     79999999875321     1111        1247788999986 4444

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=91.32  E-value=0.38  Score=45.13  Aligned_cols=66  Identities=17%  Similarity=0.137  Sum_probs=45.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      .-.+|++-|.| .|.||+.+++.|..     -|.+|++.++........  ....     ...+++++.++.+|. ++|+
T Consensus       139 el~gkTvGIiG-~G~IG~~va~~l~a-----fgm~v~~~d~~~~~~~~~--~~~~-----~~~~~Ld~lL~~sDiv~lh~  205 (324)
T COG0111         139 ELAGKTVGIIG-LGRIGRAVAKRLKA-----FGMKVIGYDPYSPRERAG--VDGV-----VGVDSLDELLAEADILTLHL  205 (324)
T ss_pred             cccCCEEEEEC-CCHHHHHHHHHHHh-----CCCeEEEECCCCchhhhc--cccc-----eecccHHHHHhhCCEEEEcC
Confidence            34579999999 99999999999998     899999999843321110  0001     112357788888886 4444

>PRK07574 formate dehydrogenase; Provisional

Probab=91.28  E-value=0.22  Score=47.77  Aligned_cols=64  Identities=19%  Similarity=0.031  Sum_probs=44.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ..+|+|.|.| .|.||+.+++.|..     .|.+|++.+|........ ..     .++.-..+++++++.+|.|+
T Consensus       190 L~gktVGIvG-~G~IG~~vA~~l~~-----fG~~V~~~dr~~~~~~~~-~~-----~g~~~~~~l~ell~~aDvV~  253 (385)
T PRK07574        190 LEGMTVGIVG-AGRIGLAVLRRLKP-----FDVKLHYTDRHRLPEEVE-QE-----LGLTYHVSFDSLVSVCDVVT  253 (385)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCCchhhH-hh-----cCceecCCHHHHhhcCCEEE
Confidence            3568999999 89999999999998     799999999865221000 00     11111234677889999643

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=91.19  E-value=1  Score=39.99  Aligned_cols=35  Identities=29%  Similarity=0.266  Sum_probs=28.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      -++++|+|.| .|-+|+++++.|..     .|. ++++++.+
T Consensus        19 L~~~~VlivG-~GglGs~va~~La~-----~Gvg~i~lvD~D   54 (228)
T cd00757          19 LKNARVLVVG-AGGLGSPAAEYLAA-----AGVGKLGLVDDD   54 (228)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence            3467999999 88899999999998     566 57777764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=91.19  E-value=0.39  Score=44.45  Aligned_cols=31  Identities=26%  Similarity=0.326  Sum_probs=25.7

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   61 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~   61 (396)
                      +|.|.|||||.|..|++.|...|    ..++..+.
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP----~~el~~l~   33 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRD----DIELLSIA   33 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCC----CeEEEEEe
Confidence            79999999999999999999853    34666554

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=91.19  E-value=0.69  Score=40.27  Aligned_cols=37  Identities=27%  Similarity=0.249  Sum_probs=30.6

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      ..-.+++|+|.| .|-+|+.+++.|..     .|. ++++++++
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~-----~Gv~~i~lvD~d   54 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAG-----AGVGTIVIVDDD   54 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEecCC
Confidence            333467999999 88899999999998     676 68888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=91.16  E-value=0.38  Score=40.92  Aligned_cols=64  Identities=25%  Similarity=0.248  Sum_probs=42.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ...+++|.|.| .|-||+.+++.|..     -|.+|++.+|...... .....+        ...+++++++.+|.|+.
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~~~~--------~~~~l~ell~~aDiv~~   97 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKA-----FGMRVIGYDRSPKPEEGADEFGV--------EYVSLDELLAQADIVSL   97 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHH-----TT-EEEEEESSCHHHHHHHHTTE--------EESSHHHHHHH-SEEEE
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeec-----CCceeEEecccCChhhhcccccc--------eeeehhhhcchhhhhhh
Confidence            34578999999 89999999999998     8999999999864311 000011        11245677888886433

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=90.77  E-value=0.39  Score=46.11  Aligned_cols=61  Identities=21%  Similarity=0.165  Sum_probs=43.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      ..+++|.|.| .|.||+.+++.|..     -|++|++.++.....   ....        ...+++++++.+|. ++|+
T Consensus       114 l~gktvGIIG-~G~IG~~va~~l~a-----~G~~V~~~Dp~~~~~---~~~~--------~~~~l~ell~~aDiV~lh~  175 (381)
T PRK00257        114 LAERTYGVVG-AGHVGGRLVRVLRG-----LGWKVLVCDPPRQEA---EGDG--------DFVSLERILEECDVISLHT  175 (381)
T ss_pred             cCcCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCccccc---ccCc--------cccCHHHHHhhCCEEEEeC
Confidence            3468999999 89999999999998     899999988632211   0111        11246778888986 4555

>TIGR00518 alaDH alanine dehydrogenase

Probab=90.77  E-value=0.23  Score=47.60  Aligned_cols=71  Identities=13%  Similarity=0.021  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      +.+|+|+|+ |-+|...++.|..     .|.+|++++|++.... .....-..+..+..+++.+.+.+..+|.|+.++
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~-----lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~  238 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANG-----LGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAV  238 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHH-----CCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcc
Confidence            467999985 9999999999998     7889999998753210 000000123445667788888899999887764

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.74  E-value=0.52  Score=43.49  Aligned_cols=53  Identities=17%  Similarity=0.158  Sum_probs=42.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ..+|+|.|.|.+|.+|..++..|++     .|+.|++.. |..                     ++.++.+.+|.|+-+.
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~-----~g~tVtv~~~rT~---------------------~l~e~~~~ADIVIsav  209 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLA-----ANATVTIAHSRTR---------------------DLPAVCRRADILVAAV  209 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHh-----CCCEEEEECCCCC---------------------CHHHHHhcCCEEEEec
Confidence            4579999999999999999999998     899999884 431                     1456677888666653

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=90.61  E-value=0.31  Score=45.91  Aligned_cols=60  Identities=13%  Similarity=0.204  Sum_probs=43.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ..+++|.|.| .|.||+.+++.|..     .|++|++.+|.+....   .   ...    -..++.++++.+|.|+
T Consensus       144 l~g~~VgIIG-~G~IG~~vA~~L~~-----~G~~V~~~d~~~~~~~---~---~~~----~~~~l~ell~~aDiVi  203 (330)
T PRK12480        144 VKNMTVAIIG-TGRIGAATAKIYAG-----FGATITAYDAYPNKDL---D---FLT----YKDSVKEAIKDADIIS  203 (330)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEeCChhHhh---h---hhh----ccCCHHHHHhcCCEEE
Confidence            3567999999 89999999999988     7999999998754311   0   111    1124677888998633

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=90.45  E-value=2.3  Score=37.91  Aligned_cols=90  Identities=17%  Similarity=0.046  Sum_probs=55.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCC--CeeEEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLT--DVTHIFY  102 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~--~V~h~a~  102 (396)
                      .++|||.|||+= +..|+++|..     .+..++..+-......+..+....+.+-..+.+.+.+.++...  .|+..  
T Consensus         2 ~~~ilvlGGT~D-ar~la~~L~~-----~~~~~~~ss~t~~g~~l~~~~~~~~~~G~l~~e~l~~~l~e~~i~llIDA--   73 (257)
T COG2099           2 MMRILLLGGTSD-ARALAKKLAA-----APVDIILSSLTGYGAKLAEQIGPVRVGGFLGAEGLAAFLREEGIDLLIDA--   73 (257)
T ss_pred             CceEEEEeccHH-HHHHHHHhhc-----cCccEEEEEcccccccchhccCCeeecCcCCHHHHHHHHHHcCCCEEEEC--
Confidence            468999999998 8999999998     4433333332211111111222356677788888888887654  23333  


Q ss_pred             eccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047          103 VTWTNRSTEAENCKINGSMFRNVLRAVIPNA  133 (396)
Q Consensus       103 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  133 (396)
                       +++.          -..-++|.+++|+..+
T Consensus        74 -THPy----------Aa~iS~Na~~aake~g   93 (257)
T COG2099          74 -THPY----------AARISQNAARAAKETG   93 (257)
T ss_pred             -CChH----------HHHHHHHHHHHHHHhC
Confidence             2221          1245678999999876

>PLN02735 carbamoyl-phosphate synthase

Probab=90.44  E-value=0.87  Score=50.06  Aligned_cols=79  Identities=13%  Similarity=0.137  Sum_probs=48.9

Q ss_pred             cccCcCCCCCCEEEEEcCCCh----------hHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH
Q 016047           16 EEDEPARSYQSVALIVGVTGI----------VGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE   85 (396)
Q Consensus        16 ~~~~~~~~~~~~iLVtGatGf----------iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~   85 (396)
                      -+.+|...+-|||||+|+...          .|..+++.|.+     .|++|++++.++........-.+.+..+..+++
T Consensus        14 ~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke-----~G~~Vi~vd~np~t~~~~~~~aD~~yi~p~~~e   88 (1102)
T PLN02735         14 ATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKE-----EGYEVVLINSNPATIMTDPETADRTYIAPMTPE   88 (1102)
T ss_pred             cccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHH-----cCCEEEEEeCCcccccCChhhCcEEEeCCCCHH
Confidence            344445555689999996542          38889999999     899999999876432111111122334555677


Q ss_pred             HHHHHHhc--CCCeeE
Q 016047           86 ETQAKLSQ--LTDVTH   99 (396)
Q Consensus        86 ~~~~~~~~--~~~V~h   99 (396)
                      .+.+.++.  +|.|+.
T Consensus        89 ~v~~ii~~e~~D~Iip  104 (1102)
T PLN02735         89 LVEQVIAKERPDALLP  104 (1102)
T ss_pred             HHHHHHHHhCCCEEEE
Confidence            77665554  444443

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=90.40  E-value=0.19  Score=43.84  Aligned_cols=37  Identities=16%  Similarity=0.312  Sum_probs=32.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      -+++.+.|++||+|..++..+..     .||+|.-+.|+...
T Consensus         2 i~k~~vfgg~gflg~~ic~~a~~-----sgy~vvsvsrsgas   38 (283)
T KOG4288|consen    2 IPKLIVFGGNGFLGKRICQEAVT-----SGYQVVSVSRSGAS   38 (283)
T ss_pred             CccceeecccccchhhhhHHHHh-----cCceEEEeccccCC
Confidence            45789999999999999999998     79999999998654

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=90.17  E-value=0.38  Score=38.41  Aligned_cols=32  Identities=19%  Similarity=0.395  Sum_probs=26.8

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      |.|.|+||-||+..++-+.+.+   ..++|++++=
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~---d~f~v~~Lsa   32 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHP---DKFEVVALSA   32 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCT---TTEEEEEEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCC---CceEEEEEEc
Confidence            6899999999999999888743   4588988874

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=90.12  E-value=0.43  Score=44.70  Aligned_cols=35  Identities=23%  Similarity=0.271  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..++|+|.| +|-+|+.++..|.+     .|++|+++.|++
T Consensus         4 ~~m~I~IiG-~GaiG~~lA~~L~~-----~g~~V~~~~r~~   38 (313)
T PRK06249          4 ETPRIGIIG-TGAIGGFYGAMLAR-----AGFDVHFLLRSD   38 (313)
T ss_pred             cCcEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEEeCC
Confidence            346899998 89999999999998     799999999975

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=90.08  E-value=1.6  Score=39.11  Aligned_cols=35  Identities=23%  Similarity=0.185  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      ...+|+|.| .|-+|+.++..|..     .|. ++++++++.
T Consensus        23 ~~~~VlvvG-~GglGs~va~~La~-----~Gvg~i~lvD~D~   58 (240)
T TIGR02355        23 KASRVLIVG-LGGLGCAASQYLAA-----AGVGNLTLLDFDT   58 (240)
T ss_pred             hCCcEEEEC-cCHHHHHHHHHHHH-----cCCCEEEEEeCCc
Confidence            357899999 78899999999998     565 588888764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=89.98  E-value=0.88  Score=42.33  Aligned_cols=67  Identities=16%  Similarity=0.190  Sum_probs=44.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC-CCCCeeEEE-----ecCCChHHHHHHHhcCCCe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQ-----CDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~-----~Dl~d~~~~~~~~~~~~~V   97 (396)
                      ++|.|.| +|--|++|+..|.+     +||+|+.-.|++...  .. ...+.+++.     ..+.-..++.++++++|.|
T Consensus         2 ~kI~ViG-aGswGTALA~~la~-----ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~i   75 (329)
T COG0240           2 MKIAVIG-AGSWGTALAKVLAR-----NGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADII   75 (329)
T ss_pred             ceEEEEc-CChHHHHHHHHHHh-----cCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEE
Confidence            5899999 77779999999999     789999999975321  00 112223333     2222234678888888854


Q ss_pred             e
Q 016047           98 T   98 (396)
Q Consensus        98 ~   98 (396)
                      +
T Consensus        76 v   76 (329)
T COG0240          76 V   76 (329)
T ss_pred             E
Confidence            3

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=89.97  E-value=1.5  Score=38.06  Aligned_cols=38  Identities=24%  Similarity=0.357  Sum_probs=29.8

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      ..-+.++|+|.|+.| +|+++++.|..     .|. +++.++.+.
T Consensus        17 ~~L~~s~VlIiG~gg-lG~evak~La~-----~GVg~i~lvD~d~   55 (197)
T cd01492          17 KRLRSARILLIGLKG-LGAEIAKNLVL-----SGIGSLTILDDRT   55 (197)
T ss_pred             HHHHhCcEEEEcCCH-HHHHHHHHHHH-----cCCCEEEEEECCc
Confidence            333467999999666 99999999998     676 488888653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK06932 glycerate dehydrogenase; Provisional

Probab=89.91  E-value=0.58  Score=43.81  Aligned_cols=61  Identities=15%  Similarity=0.071  Sum_probs=43.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      ...+++|.|.| .|.||+.+++.|..     -|.+|++.+|.....      .     +. ...+++++++.+|. ++|+
T Consensus       144 ~l~gktvgIiG-~G~IG~~va~~l~~-----fg~~V~~~~~~~~~~------~-----~~-~~~~l~ell~~sDiv~l~~  205 (314)
T PRK06932        144 DVRGSTLGVFG-KGCLGTEVGRLAQA-----LGMKVLYAEHKGASV------C-----RE-GYTPFEEVLKQADIVTLHC  205 (314)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhc-----CCCEEEEECCCcccc------c-----cc-ccCCHHHHHHhCCEEEEcC
Confidence            34578999999 89999999999987     799999987643211      0     00 12357888999996 4454

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=89.79  E-value=1  Score=38.55  Aligned_cols=76  Identities=22%  Similarity=0.186  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCC-hHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD-PEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~~~V~h~a  101 (396)
                      ..+|+|+|.|.+.-+|..|+..|++     +|..|+.++.+...................| +..+.+.++.+|.|+-.+
T Consensus        60 l~GK~vvVIGrS~iVGkPla~lL~~-----~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAv  134 (197)
T cd01079          60 LYGKTITIINRSEVVGRPLAALLAN-----DGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGV  134 (197)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHH-----CCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEcc
Confidence            4578999999999999999999998     7889998864432111000000111111112 224677888899776665


Q ss_pred             Ee
Q 016047          102 YV  103 (396)
Q Consensus       102 ~~  103 (396)
                      +.
T Consensus       135 G~  136 (197)
T cd01079         135 PS  136 (197)
T ss_pred             CC
Confidence            43

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK06444 prephenate dehydrogenase; Provisional

Probab=89.78  E-value=0.36  Score=41.77  Aligned_cols=28  Identities=32%  Similarity=0.520  Sum_probs=25.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVY   58 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~   58 (396)
                      ++|.|.||+|-+|+.+++.|.+     .||.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~-----~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDD-----NGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHh-----CCCEEE
Confidence            4899999999999999999998     799986

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=89.76  E-value=1.6  Score=39.23  Aligned_cols=34  Identities=21%  Similarity=0.209  Sum_probs=28.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      .+++|+|.|+ |-+|+.+++.|..     .|. ++++++.+
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~-----~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAA-----AGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence            4579999995 9999999999998     565 58888765

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=89.52  E-value=0.49  Score=44.87  Aligned_cols=76  Identities=16%  Similarity=0.039  Sum_probs=45.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh----cCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTD   96 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~~~   96 (396)
                      .+.++.|||.||+|-+|++.+..+..     .+ ..|++........+...-+ .-...|..+++-.+...+    ++|.
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~-----~~~~~v~t~~s~e~~~l~k~lG-Ad~vvdy~~~~~~e~~kk~~~~~~Dv  228 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKH-----AGAIKVVTACSKEKLELVKKLG-ADEVVDYKDENVVELIKKYTGKGVDV  228 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHh-----cCCcEEEEEcccchHHHHHHcC-CcEeecCCCHHHHHHHHhhcCCCccE
Confidence            34567999999999999999988876     56 3444444332211110011 123567777654444333    3677


Q ss_pred             eeEEEEe
Q 016047           97 VTHIFYV  103 (396)
Q Consensus        97 V~h~a~~  103 (396)
                      |++|++.
T Consensus       229 VlD~vg~  235 (347)
T KOG1198|consen  229 VLDCVGG  235 (347)
T ss_pred             EEECCCC
Confidence            8887653

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=89.47  E-value=1.3  Score=42.19  Aligned_cols=37  Identities=11%  Similarity=0.156  Sum_probs=29.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      .-++.+|||.| .|-+|+.++..|..     .|. ++++++.+.
T Consensus        25 ~L~~~~VlivG-~GGlGs~~a~~La~-----~Gvg~i~lvD~D~   62 (355)
T PRK05597         25 SLFDAKVAVIG-AGGLGSPALLYLAG-----AGVGHITIIDDDT   62 (355)
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHH-----cCCCeEEEEeCCE
Confidence            33567999999 68899999999998     676 588888763

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=89.46  E-value=0.4  Score=46.81  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=31.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ++|.|.| .|++|..++..|.+     .||+|+++++++.
T Consensus         4 ~kI~VIG-lG~~G~~~A~~La~-----~G~~V~~~D~~~~   37 (415)
T PRK11064          4 ETISVIG-LGYIGLPTAAAFAS-----RQKQVIGVDINQH   37 (415)
T ss_pred             cEEEEEC-cchhhHHHHHHHHh-----CCCEEEEEeCCHH
Confidence            6899998 89999999999998     8999999999764

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=89.35  E-value=0.53  Score=44.48  Aligned_cols=23  Identities=35%  Similarity=0.524  Sum_probs=21.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPL   47 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~   47 (396)
                      +.+|.|.||||++|..|++.|.+
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~   27 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEK   27 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHH
Confidence            36899999999999999999985

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=89.33  E-value=0.49  Score=46.00  Aligned_cols=62  Identities=19%  Similarity=0.105  Sum_probs=44.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      -.+|+|.|.| .|.||+.+++.|..     -|.+|++.+|.+....   ..+.       ...+++++++.+|. ++|+
T Consensus       149 L~gktvGIiG-~G~IG~~vA~~~~~-----fGm~V~~~d~~~~~~~---~~~~-------~~~~l~ell~~sDiVslh~  211 (409)
T PRK11790        149 VRGKTLGIVG-YGHIGTQLSVLAES-----LGMRVYFYDIEDKLPL---GNAR-------QVGSLEELLAQSDVVSLHV  211 (409)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCCccccc---CCce-------ecCCHHHHHhhCCEEEEcC
Confidence            4578999999 89999999999988     8999999997532210   1111       12257788888986 4454

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=89.29  E-value=0.5  Score=38.17  Aligned_cols=68  Identities=18%  Similarity=0.127  Sum_probs=45.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      ...+++++|.|| |-.|+.++..|.+     .|.+ |+++.|.....     ......+++  .++.   ++.+.+..+|
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~-----~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~--~~~~---~~~~~~~~~D   77 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAA-----LGAKEITIVNRTPERAEALAEEFGGVNIEA--IPLE---DLEEALQEAD   77 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHH-----TTSSEEEEEESSHHHHHHHHHHHTGCSEEE--EEGG---GHCHHHHTES
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHH-----cCCCEEEEEECCHHHHHHHHHHcCccccce--eeHH---HHHHHHhhCC
Confidence            334689999995 8899999999998     6765 99999975431     001112333  3333   3446678888


Q ss_pred             CeeEE
Q 016047           96 DVTHI  100 (396)
Q Consensus        96 ~V~h~  100 (396)
                      .|+++
T Consensus        78 ivI~a   82 (135)
T PF01488_consen   78 IVINA   82 (135)
T ss_dssp             EEEE-
T ss_pred             eEEEe
Confidence            88877

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08328 hypothetical protein; Provisional

Probab=89.23  E-value=2.2  Score=37.99  Aligned_cols=36  Identities=17%  Similarity=0.275  Sum_probs=29.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      .-++.+|+|.| +|-+|++++..|..     .|. ++++++.+
T Consensus        24 ~L~~~~VlIiG-~GGlGs~ia~~La~-----~Gvg~i~lvD~D   60 (231)
T PRK08328         24 KLKKAKVAVVG-VGGLGSPVAYYLAA-----AGVGRILLIDEQ   60 (231)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEcCC
Confidence            33467999999 78889999999998     565 58888765

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=89.19  E-value=1.3  Score=36.03  Aligned_cols=54  Identities=26%  Similarity=0.251  Sum_probs=42.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ..+|+|+|.|.+.-+|..|+..|.+     +|..|+.+.++..                    ++++.++.+|.|+-..
T Consensus        26 ~~gk~v~VvGrs~~vG~pla~lL~~-----~gatV~~~~~~t~--------------------~l~~~v~~ADIVvsAt   79 (140)
T cd05212          26 LDGKKVLVVGRSGIVGAPLQCLLQR-----DGATVYSCDWKTI--------------------QLQSKVHDADVVVVGS   79 (140)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEeCCCCc--------------------CHHHHHhhCCEEEEec
Confidence            3468999999999999999999998     7889988875431                    2456778888655553

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=89.14  E-value=0.23  Score=48.47  Aligned_cols=67  Identities=19%  Similarity=0.092  Sum_probs=45.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ..+++|+|.|+ |-+|..++..|..     .| .+|++++|.....  ....-+...     .+.+++.+++.++|.|+-
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~-----~G~~~V~v~~rs~~ra~~la~~~g~~~-----i~~~~l~~~l~~aDvVi~  246 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLR-----KGVGKILIANRTYERAEDLAKELGGEA-----VKFEDLEEYLAEADIVIS  246 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHHcCCeE-----eeHHHHHHHHhhCCEEEE
Confidence            34589999995 9999999999988     67 6899999976432  100001111     123466777888887666


Q ss_pred             E
Q 016047          100 I  100 (396)
Q Consensus       100 ~  100 (396)
                      +
T Consensus       247 a  247 (417)
T TIGR01035       247 S  247 (417)
T ss_pred             C
Confidence            6

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=89.13  E-value=0.83  Score=34.93  Aligned_cols=35  Identities=26%  Similarity=0.159  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+++|||+|| |-+|..=++.|++     .|.+|+.++...
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~-----~gA~v~vis~~~   40 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLE-----AGAKVTVISPEI   40 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCC-----CTBEEEEEESSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEECCch
Confidence            4689999995 9999999999999     789999999873

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=89.12  E-value=0.55  Score=38.66  Aligned_cols=36  Identities=25%  Similarity=0.148  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~   65 (396)
                      .+++|+|+|+ |.+|..+++.|.+     .| ++|++++|++.
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~-----~g~~~v~v~~r~~~   54 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAE-----LGAAKIVIVNRTLE   54 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEcCCHH
Confidence            3579999996 9999999999987     54 78999998753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=88.97  E-value=0.64  Score=46.88  Aligned_cols=64  Identities=23%  Similarity=0.186  Sum_probs=44.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      -.+|+|.|.| .|.||+.+++.|..     .|++|++.+|..........+++..        ++.++++.+|. ++|+
T Consensus       138 l~gktvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~~~--------~l~ell~~aDiV~l~l  202 (526)
T PRK13581        138 LYGKTLGIIG-LGRIGSEVAKRAKA-----FGMKVIAYDPYISPERAAQLGVELV--------SLDELLARADFITLHT  202 (526)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCChhHHHhcCCEEE--------cHHHHHhhCCEEEEcc
Confidence            3568999999 89999999999998     8999999998542211111122221        36677888886 3443

>PLN03139 formate dehydrogenase; Provisional

Probab=88.97  E-value=0.45  Score=45.75  Aligned_cols=64  Identities=17%  Similarity=0.049  Sum_probs=44.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ...+++|.|.| .|.||+.+++.|..     .|.+|++.+|..... .....++.       -.++++++++.+|.|+
T Consensus       196 ~L~gktVGIVG-~G~IG~~vA~~L~a-----fG~~V~~~d~~~~~~~~~~~~g~~-------~~~~l~ell~~sDvV~  260 (386)
T PLN03139        196 DLEGKTVGTVG-AGRIGRLLLQRLKP-----FNCNLLYHDRLKMDPELEKETGAK-------FEEDLDAMLPKCDVVV  260 (386)
T ss_pred             CCCCCEEEEEe-ecHHHHHHHHHHHH-----CCCEEEEECCCCcchhhHhhcCce-------ecCCHHHHHhhCCEEE
Confidence            34578999999 89999999999998     799999988864221 10001111       1124677888898633

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=88.94  E-value=0.68  Score=38.53  Aligned_cols=32  Identities=25%  Similarity=0.135  Sum_probs=28.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      +++|+|.| .|-+|...++.|++     .|++|++++.
T Consensus        13 ~~~vlVvG-GG~va~rka~~Ll~-----~ga~V~VIsp   44 (157)
T PRK06719         13 NKVVVIIG-GGKIAYRKASGLKD-----TGAFVTVVSP   44 (157)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEcC
Confidence            58999999 89999999999999     7999998853

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=88.93  E-value=0.62  Score=42.87  Aligned_cols=73  Identities=14%  Similarity=0.059  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      .+++|-|+|+.| +|+-=++.-..     -|++|+++++...+.  ....-+.+.+..-..|++.++++....|.++|.+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKA-----MG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v  254 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKA-----MGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTV  254 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHH-----hCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceee
Confidence            458999999999 99877776666     799999999986321  1111244444444448888888888788888876


Q ss_pred             E
Q 016047          102 Y  102 (396)
Q Consensus       102 ~  102 (396)
                      .
T Consensus       255 ~  255 (360)
T KOG0023|consen  255 S  255 (360)
T ss_pred             e
Confidence            5

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=88.90  E-value=0.23  Score=48.59  Aligned_cols=69  Identities=16%  Similarity=0.095  Sum_probs=45.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ..+++|+|.| +|-+|..++..|..     .|. +|++++|.+.........+   .++..+.+++.+.+.++|.|+.+
T Consensus       180 ~~~~~vlViG-aG~iG~~~a~~L~~-----~G~~~V~v~~r~~~ra~~la~~~---g~~~~~~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        180 LSGKKVLVIG-AGEMGELVAKHLAE-----KGVRKITVANRTLERAEELAEEF---GGEAIPLDELPEALAEADIVISS  249 (423)
T ss_pred             ccCCEEEEEC-chHHHHHHHHHHHH-----CCCCeEEEEeCCHHHHHHHHHHc---CCcEeeHHHHHHHhccCCEEEEC
Confidence            3457999999 59999999999987     676 7999998754321000011   11223335566778888877766

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=88.80  E-value=0.38  Score=41.05  Aligned_cols=33  Identities=21%  Similarity=0.469  Sum_probs=28.2

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      +|.|.|| |.+|+.++..++.     .|++|+.+++++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~-----~G~~V~l~d~~~~   33 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFAR-----AGYEVTLYDRSPE   33 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHH-----TTSEEEEE-SSHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHh-----CCCcEEEEECChH
Confidence            6899995 9999999999998     7999999998753

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=88.76  E-value=0.49  Score=35.44  Aligned_cols=62  Identities=23%  Similarity=0.195  Sum_probs=39.2

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCC---cEEEEE-eCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGV-ARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l-~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ||.|.| +|.+|..|++.|++     .|   ++|+.. +|++...  +...-++.+...|      ..++++.+|.|+-+
T Consensus         1 kI~iIG-~G~mg~al~~~l~~-----~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~advvila   68 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLA-----SGIKPHEVIIVSSRSPEKAAELAKEYGVQATADD------NEEAAQEADVVILA   68 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHH-----TTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEE------HHHHHHHTSEEEE-
T ss_pred             CEEEEC-CCHHHHHHHHHHHH-----CCCCceeEEeeccCcHHHHHHHHHhhccccccCC------hHHhhccCCEEEEE
Confidence            578886 99999999999998     67   899955 7776432  1001122233222      34566778866555

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN02306 hydroxypyruvate reductase

Probab=88.67  E-value=0.58  Score=45.06  Aligned_cols=36  Identities=11%  Similarity=0.071  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcC-CCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~-~~~~~~~g~~V~~l~R~~   64 (396)
                      -.+++|.|.| .|.||+.+++.|. .     -|.+|++.+|..
T Consensus       163 L~gktvGIiG-~G~IG~~vA~~l~~~-----fGm~V~~~d~~~  199 (386)
T PLN02306        163 LKGQTVGVIG-AGRIGSAYARMMVEG-----FKMNLIYYDLYQ  199 (386)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhc-----CCCEEEEECCCC
Confidence            4578999999 9999999999986 5     688999999864

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=88.63  E-value=2.9  Score=33.93  Aligned_cols=32  Identities=25%  Similarity=0.236  Sum_probs=26.9

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      +|+|.| .|-+|+.+++.|..     .|+ ++++++.+.
T Consensus         1 ~VliiG-~GglGs~ia~~L~~-----~Gv~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLAR-----SGVGKITLIDFDT   33 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEEcCCC
Confidence            589999 59999999999998     677 588888653

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=88.29  E-value=0.67  Score=42.56  Aligned_cols=37  Identities=19%  Similarity=0.014  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~   65 (396)
                      ..++++||+|+ |-+|+.++..|..     .| .+|++++|+..
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~-----~g~~~V~v~~R~~~  158 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLD-----LGVAEITIVNRTVE  158 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHH-----cCCCEEEEEeCCHH
Confidence            34579999995 9999999999998     67 68999999753

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=88.23  E-value=0.25  Score=46.20  Aligned_cols=69  Identities=16%  Similarity=0.108  Sum_probs=44.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .+++|+|.|+ |-+|..+++.|...    .+.+|++++|.+.........+   .++..+.+++.+.+..+|.|+.+
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~----g~~~V~v~~r~~~ra~~la~~~---g~~~~~~~~~~~~l~~aDvVi~a  245 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAK----GVAEITIANRTYERAEELAKEL---GGNAVPLDELLELLNEADVVISA  245 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHc----CCCEEEEEeCCHHHHHHHHHHc---CCeEEeHHHHHHHHhcCCEEEEC
Confidence            4579999995 99999999999872    3467999999764320000011   11222334567778888877666

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=88.18  E-value=0.5  Score=44.86  Aligned_cols=71  Identities=14%  Similarity=0.014  Sum_probs=46.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCee-EEEec-----CCChHHHHHHH
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVE-YVQCD-----VSDPEETQAKL   91 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~-~~~~D-----l~d~~~~~~~~   91 (396)
                      |+|-|.| +||+|.-..-.|.+     .||+|+|++.++.+.       . ...++++ +++-+     +.-..+.++++
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~-----~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~   74 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAE-----LGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAV   74 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHH-----cCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHH
Confidence            5899999 99999999999998     899999999875321       0 0112222 11111     22223457788


Q ss_pred             hcCCCeeEEEE
Q 016047           92 SQLTDVTHIFY  102 (396)
Q Consensus        92 ~~~~~V~h~a~  102 (396)
                      ++.|.+|-+.+
T Consensus        75 ~~adv~fIavg   85 (414)
T COG1004          75 KDADVVFIAVG   85 (414)
T ss_pred             hcCCEEEEEcC
Confidence            88887666643

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=88.16  E-value=1.1  Score=37.39  Aligned_cols=55  Identities=20%  Similarity=0.100  Sum_probs=38.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ..+|+|+|.|.++.+|..|+..|.+     +|..|+.+....                    .++++.++.+|.|+-.++
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~-----~~atVt~~h~~T--------------------~~l~~~~~~ADIVVsa~G   88 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLN-----KGATVTICHSKT--------------------KNLQEITRRADIVVSAVG   88 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHH-----TT-EEEEE-TTS--------------------SSHHHHHTTSSEEEE-SS
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHh-----CCCeEEeccCCC--------------------CcccceeeeccEEeeeec
Confidence            4568999999999999999999998     788888765542                    124667788887666543

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=88.04  E-value=0.99  Score=42.42  Aligned_cols=64  Identities=17%  Similarity=0.038  Sum_probs=43.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcC-CCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~-~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      -.++++.|.| .|.||+.+++.|. .     -|.+|++.+|..........+++        ..+++++++.+|. ++|+
T Consensus       143 L~gktvGIiG-~G~IG~~va~~l~~~-----fgm~V~~~~~~~~~~~~~~~~~~--------~~~l~ell~~sDvv~lh~  208 (323)
T PRK15409        143 VHHKTLGIVG-MGRIGMALAQRAHFG-----FNMPILYNARRHHKEAEERFNAR--------YCDLDTLLQESDFVCIIL  208 (323)
T ss_pred             CCCCEEEEEc-ccHHHHHHHHHHHhc-----CCCEEEEECCCCchhhHHhcCcE--------ecCHHHHHHhCCEEEEeC
Confidence            4578999999 8999999999997 6     68899988876432110001111        1246778899996 4454

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=88.03  E-value=0.68  Score=46.68  Aligned_cols=65  Identities=18%  Similarity=0.166  Sum_probs=43.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      ..+|+|.|.| .|.||+.+++.|..     .|++|++.+|..........++..       .++++++++.+|. ++|+
T Consensus       136 l~gktvgIiG-~G~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~~-------~~~l~ell~~aDvV~l~l  201 (525)
T TIGR01327       136 LYGKTLGVIG-LGRIGSIVAKRAKA-----FGMKVLAYDPYISPERAEQLGVEL-------VDDLDELLARADFITVHT  201 (525)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEECCCCChhHHHhcCCEE-------cCCHHHHHhhCCEEEEcc
Confidence            4568999999 89999999999988     799999998753221000011111       1246777888886 4444

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=87.94  E-value=1.8  Score=41.44  Aligned_cols=37  Identities=16%  Similarity=0.204  Sum_probs=30.1

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      ...+..+|+|.| .|-+|+.++..|..     .|. ++++++.+
T Consensus        37 ~~l~~~~VliiG-~GglG~~v~~~La~-----~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIG-AGGLGCPAMQSLAS-----AGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEEeCC
Confidence            344567999999 78889999999998     565 68888876

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=87.88  E-value=0.71  Score=40.17  Aligned_cols=35  Identities=20%  Similarity=0.081  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+++|||.| .|-+|...++.|++     .|++|+++++..
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~-----~ga~V~VIs~~~   43 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLK-----YGAHIVVISPEL   43 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEcCCC
Confidence            358999999 59999999999999     789999998653

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional

Probab=87.85  E-value=0.66  Score=45.13  Aligned_cols=33  Identities=27%  Similarity=0.343  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+|+|+| +|++|..++.+|.+     .|++|+++.|..
T Consensus         2 ~~vvIIG-aG~~G~~~A~~La~-----~g~~V~vle~~~   34 (410)
T PRK12409          2 SHIAVIG-AGITGVTTAYALAQ-----RGYQVTVFDRHR   34 (410)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEeCCC
Confidence            4899999 89999999999999     799999999975

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=87.84  E-value=2.7  Score=37.36  Aligned_cols=34  Identities=26%  Similarity=0.185  Sum_probs=28.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      ++.+|+|.| .|-+|+++++.|..     .|. ++++++.+
T Consensus        10 ~~~~VlVvG-~GGvGs~va~~Lar-----~GVg~i~LvD~D   44 (231)
T cd00755          10 RNAHVAVVG-LGGVGSWAAEALAR-----SGVGKLTLIDFD   44 (231)
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEECCC
Confidence            357899999 88899999999998     566 68888865

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=87.70  E-value=0.73  Score=43.06  Aligned_cols=37  Identities=24%  Similarity=0.284  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..+.++||+||+|.+|..+++.+..     .|.+|+++++.+
T Consensus       161 ~~~~~vlI~ga~g~vG~~~~~~a~~-----~g~~v~~~~~~~  197 (332)
T cd08259         161 KKGDTVLVTGAGGGVGIHAIQLAKA-----LGARVIAVTRSP  197 (332)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----cCCeEEEEeCCH
Confidence            3457899999999999999999988     789999998865

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=87.69  E-value=0.59  Score=43.28  Aligned_cols=36  Identities=19%  Similarity=0.340  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |.++|.|.| .|.+|..++..|.+     .|++|++.+|++.
T Consensus         1 ~~~~IgviG-~G~mG~~~a~~l~~-----~g~~v~~~d~~~~   36 (296)
T PRK11559          1 MTMKVGFIG-LGIMGKPMSKNLLK-----AGYSLVVYDRNPE   36 (296)
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHH-----CCCeEEEEcCCHH
Confidence            346899999 89999999999998     7999999998754

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=87.66  E-value=0.65  Score=43.08  Aligned_cols=33  Identities=30%  Similarity=0.359  Sum_probs=29.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ++|+|.| +|-+|+.++..|.+     .|++|++++|++
T Consensus         1 m~I~IiG-~G~~G~~~a~~L~~-----~g~~V~~~~r~~   33 (304)
T PRK06522          1 MKIAILG-AGAIGGLFGAALAQ-----AGHDVTLVARRG   33 (304)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCeEEEEECCh
Confidence            4799999 59999999999998     799999999964

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.61  E-value=1  Score=41.23  Aligned_cols=55  Identities=16%  Similarity=0.103  Sum_probs=42.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ..+|+|.|.|.+|.+|..++..|++     .|+.|++...+.       .             ++.+..+.+|.|+-+.+
T Consensus       156 l~Gk~v~vIG~S~ivG~Pla~lL~~-----~gatVtv~~s~t-------~-------------~l~~~~~~ADIVI~avg  210 (284)
T PRK14179        156 LEGKHAVVIGRSNIVGKPMAQLLLD-----KNATVTLTHSRT-------R-------------NLAEVARKADILVVAIG  210 (284)
T ss_pred             CCCCEEEEECCCCcCcHHHHHHHHH-----CCCEEEEECCCC-------C-------------CHHHHHhhCCEEEEecC
Confidence            4578999999999999999999998     799998772110       0             25667788887777654

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=87.52  E-value=0.67  Score=38.75  Aligned_cols=62  Identities=19%  Similarity=0.125  Sum_probs=40.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ++|.+.| .|-.|+.+++.|++     .||+|++.+|.+.... ....+  ...+|     +..++++.+|.|+-+
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~-----~g~~v~~~d~~~~~~~~~~~~g--~~~~~-----s~~e~~~~~dvvi~~   64 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAK-----AGYEVTVYDRSPEKAEALAEAG--AEVAD-----SPAEAAEQADVVILC   64 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHH-----TTTEEEEEESSHHHHHHHHHTT--EEEES-----SHHHHHHHBSEEEE-
T ss_pred             CEEEEEc-hHHHHHHHHHHHHh-----cCCeEEeeccchhhhhhhHHhh--hhhhh-----hhhhHhhcccceEee
Confidence            6899999 79999999999998     8999999998754310 00012  11222     345667777765555

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Probab=87.50  E-value=1  Score=43.82  Aligned_cols=36  Identities=22%  Similarity=0.341  Sum_probs=29.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      .|+|.|.|+||-||+..++-+.+.+   ..++|+++.-.
T Consensus        57 ~KkI~ILGSTGSIGtqtLdVI~~~p---d~f~vvaLaag   92 (454)
T PLN02696         57 PKPISLLGSTGSIGTQTLDIVAENP---DKFKVVALAAG   92 (454)
T ss_pred             ccEEEEecCCcHhhHHHHHHHHhCc---cccEEEEEECC
Confidence            3799999999999999999887643   46889888754

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=87.44  E-value=0.4  Score=44.58  Aligned_cols=65  Identities=15%  Similarity=0.127  Sum_probs=42.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      |+|.|.| .|.+|+.+++.|.+     .||+|++.+|++.... ....+..    ...+.+++.+.+..+|.|+-+
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~-----~g~~V~~~dr~~~~~~~l~~~g~~----~~~s~~~~~~~~~~~dvIi~~   66 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAK-----RGHDCVGYDHDQDAVKAMKEDRTT----GVANLRELSQRLSAPRVVWVM   66 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHcCCc----ccCCHHHHHhhcCCCCEEEEE
Confidence            3799999 89999999999998     7999999999764310 0001111    113445555555666765555

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=87.30  E-value=0.59  Score=42.85  Aligned_cols=35  Identities=31%  Similarity=0.317  Sum_probs=28.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .++|+|.| .|.+|+.+++.|.+     .|+.|.++.++..
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~-----~g~~v~i~g~d~~   37 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKE-----AGLVVRIIGRDRS   37 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHH-----cCCeEEEEeecCc
Confidence            45777777 99999999999999     8998877776543

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=87.28  E-value=0.76  Score=43.34  Aligned_cols=37  Identities=30%  Similarity=0.415  Sum_probs=27.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      ++.+|.|.||||++|..|++.|.+...+  ..++..+..
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP--~~~l~~laS   39 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFP--VGELYALAS   39 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCC--ceEEEEEEc
Confidence            4568999999999999999999983221  235666654

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=87.26  E-value=2.1  Score=37.95  Aligned_cols=34  Identities=24%  Similarity=0.227  Sum_probs=27.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      ..+|+|.| -|-+|++.++.|.+     .|. ++++++-+.
T Consensus        30 ~~~V~VvG-iGGVGSw~veALaR-----sGig~itlID~D~   64 (263)
T COG1179          30 QAHVCVVG-IGGVGSWAVEALAR-----SGIGRITLIDMDD   64 (263)
T ss_pred             hCcEEEEe-cCchhHHHHHHHHH-----cCCCeEEEEeccc
Confidence            46899999 77789999999998     566 477777653

>PLN02775 Probable dihydrodipicolinate reductase

Probab=87.25  E-value=4.7  Score=36.92  Aligned_cols=40  Identities=18%  Similarity=0.213  Sum_probs=31.5

Q ss_pred             cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEE-EeCCC
Q 016047           20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRP   64 (396)
Q Consensus        20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~   64 (396)
                      +++++..+|+|.|++|-.|+.+++.+.+     .+.++++ +++.+
T Consensus         6 ~~~~~~i~V~V~Ga~G~MG~~~~~av~~-----~~~~Lv~~~~~~~   46 (286)
T PLN02775          6 SPPGSAIPIMVNGCTGKMGHAVAEAAVS-----AGLQLVPVSFTGP   46 (286)
T ss_pred             CCcCCCCeEEEECCCChHHHHHHHHHhc-----CCCEEEEEecccc
Confidence            4456667999999999999999999998     6778555 44444

>PLN00203 glutamyl-tRNA reductase

Probab=87.24  E-value=0.29  Score=48.97  Aligned_cols=68  Identities=21%  Similarity=0.097  Sum_probs=44.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC--CCC-CCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN--WNA-DHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~--~~~-~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      .+++|+|.|+ |-+|..+++.|..     .|. +|+++.|.....  ... .+++.+   .+...+++.+++.++|.|+.
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~-----~G~~~V~V~nRs~era~~La~~~~g~~i---~~~~~~dl~~al~~aDVVIs  335 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVS-----KGCTKMVVVNRSEERVAALREEFPDVEI---IYKPLDEMLACAAEADVVFT  335 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHh-----CCCCeEEEEeCCHHHHHHHHHHhCCCce---EeecHhhHHHHHhcCCEEEE
Confidence            3579999996 9999999999998     676 699999976432  100 012211   12223455677888887665


Q ss_pred             E
Q 016047          100 I  100 (396)
Q Consensus       100 ~  100 (396)
                      +
T Consensus       336 A  336 (519)
T PLN00203        336 S  336 (519)
T ss_pred             c
Confidence            5

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=87.19  E-value=2.8  Score=36.76  Aligned_cols=34  Identities=21%  Similarity=0.145  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      ...+|+|.| .|-+|+.++..|..     .|. ++++++.+
T Consensus        27 ~~~~V~ViG-~GglGs~ia~~La~-----~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAG-AGGLGSNIAVALAR-----SGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEEC-cCHHHHHHHHHHHH-----cCCCeEEEEeCC
Confidence            457899999 68899999999998     676 48888876

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=87.17  E-value=1.4  Score=40.41  Aligned_cols=55  Identities=20%  Similarity=0.155  Sum_probs=42.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ..+++|+|.|.++.+|+.|+..|++     +|..|+.+..+.                    .++.+.++.+|.|+-.++
T Consensus       156 l~Gk~vvViGrs~iVGkPla~lL~~-----~~atVt~~hs~t--------------------~~l~~~~~~ADIVV~avG  210 (285)
T PRK14189        156 LRGAHAVVIGRSNIVGKPMAMLLLQ-----AGATVTICHSKT--------------------RDLAAHTRQADIVVAAVG  210 (285)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHH-----CCCEEEEecCCC--------------------CCHHHHhhhCCEEEEcCC
Confidence            3568999999999999999999998     788898764321                    125567788887666544

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=87.12  E-value=0.65  Score=45.81  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +++|+|||++| +|...++.|.+     .|++|++.++..
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~-----~G~~V~~~d~~~   38 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHK-----LGANVTVNDGKP   38 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHH-----CCCEEEEEcCCC
Confidence            57899999988 99999999998     899999998764

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=87.12  E-value=3.9  Score=37.21  Aligned_cols=35  Identities=23%  Similarity=0.152  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      ...+|+|.| .|-+|+++++.|..     .|. ++++++.+.
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar-----~GVg~itLiD~D~   64 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALAR-----TGIGAITLIDMDD   64 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHH-----cCCCEEEEEeCCE
Confidence            457999999 88899999999998     674 688888763

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=87.07  E-value=0.62  Score=42.81  Aligned_cols=34  Identities=41%  Similarity=0.487  Sum_probs=30.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ++|.|.| .|.+|..++..|.+     .|++|++.+|++.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~-----~g~~V~~~d~~~~   34 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRS-----LGHTVYGVSRRES   34 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHH-----CCCEEEEEECCHH
Confidence            3799999 89999999999998     7999999998753

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=86.94  E-value=1  Score=39.32  Aligned_cols=52  Identities=15%  Similarity=0.128  Sum_probs=40.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVS   82 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~   82 (396)
                      +++|||.| .|-+|..-++.|++     .|.+|++++....+.   +....+++++..+..
T Consensus         9 gk~vlVvG-gG~va~rk~~~Ll~-----~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~   63 (205)
T TIGR01470         9 GRAVLVVG-GGDVALRKARLLLK-----AGAQLRVIAEELESELTLLAEQGGITWLARCFD   63 (205)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHH-----CCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCC
Confidence            57999999 89999999999999     789999998754322   112247888888876

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06545 prephenate dehydrogenase; Validated

Probab=86.83  E-value=0.45  Score=45.52  Aligned_cols=34  Identities=32%  Similarity=0.488  Sum_probs=29.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ++|.|.| +|.+|..++..|.+     .|++|.+.++++.
T Consensus         1 ~~I~iIG-~GliG~siA~~L~~-----~G~~v~i~~~~~~   34 (359)
T PRK06545          1 RTVLIVG-LGLIGGSLALAIKA-----AGPDVFIIGYDPS   34 (359)
T ss_pred             CeEEEEE-eCHHHHHHHHHHHh-----cCCCeEEEEeCCC
Confidence            4789998 89999999999998     7888888887754

>PRK08605 D-lactate dehydrogenase; Validated

Probab=86.76  E-value=1  Score=42.59  Aligned_cols=63  Identities=17%  Similarity=0.136  Sum_probs=42.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ..+++|.|.| .|.||+.+++.|.+.    .|.+|++.+|.+.....  ..       +.-..++.++++.+|.|+-
T Consensus       144 l~g~~VgIIG-~G~IG~~vA~~L~~~----~g~~V~~~d~~~~~~~~--~~-------~~~~~~l~ell~~aDvIvl  206 (332)
T PRK08605        144 IKDLKVAVIG-TGRIGLAVAKIFAKG----YGSDVVAYDPFPNAKAA--TY-------VDYKDTIEEAVEGADIVTL  206 (332)
T ss_pred             eCCCEEEEEC-CCHHHHHHHHHHHhc----CCCEEEEECCCccHhHH--hh-------ccccCCHHHHHHhCCEEEE
Confidence            3568999999 899999999999431    58899998876533210  11       1112246778888987443

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=86.69  E-value=0.97  Score=35.63  Aligned_cols=30  Identities=33%  Similarity=0.491  Sum_probs=25.8

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV   60 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l   60 (396)
                      +|.|+|++|.+|..+++.|.+.    .++++.++
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~----~~~~l~av   30 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEH----PDFEVVAL   30 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcC----CCceEEEE
Confidence            5889999999999999999984    46787777

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK08818 prephenate dehydrogenase; Provisional

Probab=86.58  E-value=0.88  Score=43.50  Aligned_cols=35  Identities=34%  Similarity=0.336  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      .++|+|.|.+|.+|..+++.|.+.    .+++|++++|.
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~----~~~~V~g~D~~   38 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTR----MQLEVIGHDPA   38 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhc----CCCEEEEEcCC
Confidence            469999999999999999999972    37899999874

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=86.24  E-value=0.73  Score=42.56  Aligned_cols=34  Identities=18%  Similarity=0.424  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ++|.|.| .|.+|..++..|.+     .|++|+++++++.
T Consensus         2 ~~V~VIG-~G~mG~~iA~~la~-----~G~~V~~~d~~~~   35 (288)
T PRK09260          2 EKLVVVG-AGVMGRGIAYVFAV-----SGFQTTLVDIKQE   35 (288)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHh-----CCCcEEEEeCCHH
Confidence            5799999 59999999999998     7999999998754

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=86.23  E-value=0.79  Score=38.10  Aligned_cols=32  Identities=25%  Similarity=0.280  Sum_probs=29.5

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ||.|.| +|..|.+++..|.+     +|++|+...|++
T Consensus         1 KI~ViG-aG~~G~AlA~~la~-----~g~~V~l~~~~~   32 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLAD-----NGHEVTLWGRDE   32 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHH-----CTEEEEEETSCH
T ss_pred             CEEEEC-cCHHHHHHHHHHHH-----cCCEEEEEeccH
Confidence            689999 89999999999999     899999999984

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=86.22  E-value=0.67  Score=43.16  Aligned_cols=22  Identities=36%  Similarity=0.517  Sum_probs=21.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPL   47 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~   47 (396)
                      ++|.|.||||.+|+.+++.|.+
T Consensus         2 ~~VavvGATG~VG~~~~~~L~e   23 (334)
T COG0136           2 LNVAVLGATGAVGQVLLELLEE   23 (334)
T ss_pred             cEEEEEeccchHHHHHHHHHHh
Confidence            6899999999999999999998

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=86.15  E-value=0.8  Score=41.69  Aligned_cols=36  Identities=11%  Similarity=0.076  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC---cEEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~   65 (396)
                      |.++|.|.| +|.+|..++..|.+     .|   ++|++++|++.
T Consensus         1 ~mm~I~iIG-~G~mG~~la~~l~~-----~g~~~~~v~v~~r~~~   39 (267)
T PRK11880          1 MMKKIGFIG-GGNMASAIIGGLLA-----SGVPAKDIIVSDPSPE   39 (267)
T ss_pred             CCCEEEEEe-chHHHHHHHHHHHh-----CCCCcceEEEEcCCHH
Confidence            457899999 79999999999987     56   67999998753

>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Probab=86.02  E-value=0.87  Score=43.31  Aligned_cols=35  Identities=20%  Similarity=0.381  Sum_probs=29.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      |+|.|.|+||.||+..++-+.+.+   ..++|.+++-.
T Consensus         2 k~i~IlGsTGSIG~qtL~Vi~~~~---~~f~v~~Laa~   36 (389)
T TIGR00243         2 KQIVILGSTGSIGKSTLDVVRHNP---DHFQVVALSAG   36 (389)
T ss_pred             ceEEEEecChHHHHHHHHHHHhCc---cccEEEEEEcC
Confidence            689999999999999998876543   46899999854

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	396
2v6f_A	364	Structure Of Progesterone 5beta-Reductase From Digi		1e-158

>pdb|2V6F|A Chain A, Structure Of Progesterone 5beta-Reductase From Digitalis Lanata Length = 364

Iteration: 1
 Score =  553 bits (1424), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 264/372 (70%), Positives = 299/372 (80%), Gaps = 8/372 (2%)
Query: 25  QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP 84
            SVALIVGVTGI+GNSLAEILPL DTPGGPWKVYGVARR +P W+ D+ + YVQCD+SDP
Sbjct: 1   SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDP 60
Query: 85  EETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG 144
           +++QAKLS LTDVTH+FYVTW NRSTE ENC+ N  MFRNVL AVIPN PNL+H+ LQTG
Sbjct: 61  DDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTG 120
Query: 145 TKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDT 204
            KHY+GPFE++GKI+ +DPP+TED+PRL   NFYY LEDI+ EEVEKKE L+WSVHRP  
Sbjct: 121 RKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGN 180
Query: 205 IFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV 264
           IFGFSPYS+MNLVG LCVYAA+CKHEG  LRF G KAAW+ YS  SDADLIAEH IWAAV
Sbjct: 181 IFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAV 240
Query: 265 DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFXXXXXXXXXXXXXXXXXTQRVKLAEFMKGK 324
           DPYAKNEAFN +NGDVFKWKH WKVLAEQF                    +KL + MKGK
Sbjct: 241 DPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGV--------DLKLQDLMKGK 292
Query: 325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFIT 384
           E VWEEIVREN L PT+L +VG WWF D++L  E  L SMNKSKEHGF GFRNSKN+FI+
Sbjct: 293 EPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFIS 352
Query: 385 WIDKVKGFKIVP 396
           WIDK K +KIVP
Sbjct: 353 WIDKAKAYKIVP 364

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	396
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-139
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-06
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	6e-05
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-04
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	2e-04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score =  399 bits (1026), Expect = e-139
 Identities = 267/371 (71%), Positives = 303/371 (81%), Gaps = 8/371 (2%)

Query: 26  SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE 85
           SVALIVGVTGI+GNSLAEILPL DTPGGPWKVYGVARR +P W+ D+ + YVQCD+SDP+
Sbjct: 2   SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPD 61

Query: 86  ETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT 145
           ++QAKLS LTDVTH+FYVTW NRSTE ENC+ N  MFRNVL AVIPN PNL+H+ LQTG 
Sbjct: 62  DSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGR 121

Query: 146 KHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTI 205
           KHY+GPFE++GKI+ +DPP+TED+PRL   NFYY LEDI+ EEVEKKE L+WSVHRP  I
Sbjct: 122 KHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNI 181

Query: 206 FGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD 265
           FGFSPYS+MNLVG LCVYAA+CKHEG  LRF G KAAW+ YS  SDADLIAEH IWAAVD
Sbjct: 182 FGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVD 241

Query: 266 PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE 325
           PYAKNEAFN +NGDVFKWKH WKVLAEQFG+E     E           +KL + MKGKE
Sbjct: 242 PYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGV--------DLKLQDLMKGKE 293

Query: 326 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITW 385
            VWEEIVREN L PT+L +VG WWF D++L  E  L SMNKSKEHGF GFRNSKN+FI+W
Sbjct: 294 PVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISW 353

Query: 386 IDKVKGFKIVP 396
           IDK K +KIVP
Sbjct: 354 IDKAKAYKIVP 364

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 34/281 (12%), Positives = 78/281 (27%), Gaps = 49/281 (17%)

Query: 28  ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL-VEYVQCDVSDPEE 86
             ++G TG++G+  A  +       G   +  + R         +L  E    ++ D   
Sbjct: 16  YAVLGATGLLGHHAARAI----RAAG-HDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAG 70

Query: 87  TQAKLSQLTDVTHIFYV---TWTNRSTEAENCKIN--GSMFRNVLRAVIPNAPNLRHVCL 141
            +     L  +  + +      +      E        +       A +     +  +  
Sbjct: 71  LER---ALRGLDGVIFSAGYYPSRPRRWQEEVASALGQT--NPFYAACL--QARVPRILY 123

Query: 142 QTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF--YYTL-----EDILFEEVEKKEE 194
             G+ + +          P   P  E +     P+    Y L     ++   E+   +  
Sbjct: 124 -VGSAYAMPR-------HPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQA--RNG 173

Query: 195 LSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL 254
           L   +  P  + G     +    G +          G    +   +          DA  
Sbjct: 174 LPVVIGIPGMVLG--ELDIGPTTGRVITAIG----NGEMTHYVAGQRNV------IDAAE 221

Query: 255 IAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG 295
                +  A++     E +     ++ +   L + +AE  G
Sbjct: 222 AGRGLL-MALERGRIGERYLLTGHNL-EMADLTRRIAELLG 260

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 14/91 (15%)

Query: 29  LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL----VEYVQCDVSDP 84
           ++ G TG  G S+A  L L D   G +KV  V R P+    A  L     E VQ D  D 
Sbjct: 9   VVFGGTGAQGGSVARTL-LED---GTFKVRVVTRNPRKK-AAKELRLQGAEVVQGDQDDQ 63

Query: 85  EETQAKLSQLTDVTHIFYVT--WTNRSTEAE 113
              +     L      F VT  W + S E E
Sbjct: 64  VIMEL---ALNGAYATFIVTNYWESCSQEQE 91

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 10/87 (11%)

Query: 20 PARSYQSVALIVGVT-GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHL----- 73
          P  S+ +  LI G   G+ G  L + L     P     ++   R  +     + L     
Sbjct: 16 PRGSHMNSILITGCNRGL-GLGLVKALLNLPQPP--QHLFTTCRNREQAKELEDLAKNHS 72

Query: 74 -VEYVQCDVSDPEETQAKLSQLTDVTH 99
           +  ++ D+ + +     ++ +  VT 
Sbjct: 73 NIHILEIDLRNFDAYDKLVADIEGVTK 99

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 28/152 (18%)

Query: 27  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEE 86
            ALI GV G VG  LA  L   +      +V+G +R  +      ++ E +  D+ D + 
Sbjct: 14  RALITGVAGFVGKYLANHLTEQN-----VEVFGTSRNNEA--KLPNV-EMISLDIMDSQR 65

Query: 87  TQAKLSQLTDVTHIF--------YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRH 138
            +  +S      +IF          +W N+        + G++  +VL AV  +  + R 
Sbjct: 66  VKKVISD-IKPDYIFHLAAKSSVKDSWLNKKGTFST-NVFGTL--HVLDAVRDSNLDCRI 121

Query: 139 VCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP 170
             L  G+       E +G I P + P +E+  
Sbjct: 122 --LTIGSS------EEYGMILPEESPVSEENQ 145

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 22/179 (12%)

Query: 29  LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ 88
            I+G TG  G+ + E         G  +V  + R           +  +Q D+ D   T 
Sbjct: 4   GIIGATGRAGSRILEEA----KNRG-HEVTAIVRNAGKITQTHKDINILQKDIFDL--TL 56

Query: 89  AKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY 148
           + LS    V   + ++         +         +++  +         V     +   
Sbjct: 57  SDLSDQNVVVDAYGISPDEAEKHVTS-------LDHLISVLNGTVSPRLLVVGGAASLQI 109

Query: 149 LGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFG 207
                  G          E      A      LE +   +     E SW+   P  +F 
Sbjct: 110 DED----GNTLLESKGLREAPYYPTARAQAKQLEHLKSHQ----AEFSWTYISPSAMFE 160

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 58/358 (16%), Positives = 97/358 (27%), Gaps = 109/358 (30%)

Query: 69  NADHLVEYVQC-DVSD-------PEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGS 120
             D  V+   C DV D        EE    +     V+    + WT  S + E  +    
Sbjct: 25  FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ---K 81

Query: 121 MFRNVLRAVIPN----APNLRHVCLQTG--TKHYLGPFEAFGKIKPYDPPFTE-DMPRLD 173
               VLR    N       ++    Q    T+ Y+   E   ++   +  F + ++ RL 
Sbjct: 82  FVEEVLR---INYKFLMSPIKTEQRQPSMMTRMYI---EQRDRLYNDNQVFAKYNVSRLQ 135

Query: 174 APNFYYTLEDILFEEVEKKEELSWSVHRPD---TIFGFSPYSLMNLVGALCVYAAVCKHE 230
               Y  L   L        EL     RP     I G      +   G   V   VC   
Sbjct: 136 P---YLKLRQAL-------LEL-----RPAKNVLIDG------VLGSGKTWVALDVCLSY 174

Query: 231 GIPLRFPGTKAAW----ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHL 286
            +  +    K  W     C S   +  L    ++   +DP                    
Sbjct: 175 KVQCKMDF-KIFWLNLKNCNS--PETVLEMLQKLLYQIDPN------------------- 212

Query: 287 WKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVG 346
           W   ++        +   + E         L   +K K      +V         L  V 
Sbjct: 213 WTSRSDHSSNIKLRIHSIQAE---------LRRLLKSKPYENCLLV---------LLNVQ 254

Query: 347 AWWFVD--------LVLTGEAKLASM-------NKSKEHGFSGF--RNSKNSFITWID 387
                +        L+ T   ++          + S +H          K+  + ++D
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	396
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.98
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.98
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.97
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.96
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.96
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.96
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.95
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.95
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.94
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.94
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.92
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.92
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.91
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.91
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.91
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.91
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.91
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.9
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.9
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.89
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.89
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.88
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.88
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.87
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.87
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.87
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.83
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.82
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.78
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.77
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.76
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.73
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.72
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.72
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.71
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.71
1spx_A	278	Short-chain reductase family member (5L265); paral	99.7
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.68
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.67
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.67
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.66
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.66
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.66
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.66
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.65
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.65
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.65
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.65
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.65
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.64
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.64
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.63
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.63
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.63
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.63
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.63
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.63
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.62
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.62
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.62
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.62
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.61
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.61
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.61
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.61
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.61
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.61
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.6
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.6
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.6
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.6
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.59
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.59
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.59
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.59
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.59
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.59
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.59
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.59
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.59
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.59
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.59
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.59
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.58
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.58
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.58
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.58
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.58
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.58
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.58
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.58
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.57
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.57
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.57
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.57
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.57
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.57
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.57
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.57
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.57
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.57
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.56
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.56
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.56
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.56
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.56
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.56
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.56
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.56
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.56
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.56
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.56
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.56
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.55
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.55
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.55
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.55
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.55
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.55
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.55
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.55
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.55
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.55
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.54
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.54
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.54
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.54
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.53
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.53
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.53
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.53
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.53
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.53
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.53
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.53
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.53
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.53
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.53
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.53
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.53
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.53
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.53
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.52
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.52
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.52
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.52
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.52
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.52
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.52
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.52
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.52
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.52
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.51
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.51
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.51
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.51
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.51
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.51
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.51
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.5
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.5
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.5
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.5
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.5
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.49
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.49
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.49
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.49
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.49
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.48
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.48
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.48
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.48
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.48
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.48
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.48
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.48
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.48
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.47
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.47
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.47
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.47
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.47
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.46
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.46
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.46
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.46
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.46
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.46
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.46
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.46
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.46
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.45
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.45
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.45
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.44
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.44
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.44
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.44
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.44
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.42
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.42
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.41
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.41
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.41
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.41
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.4
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.4
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.39
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.39
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.37
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.37
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.37
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.36
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.36
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.36
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.36
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.35
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.32
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.31
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.31
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.31
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.31
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.3
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.3
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.29
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.29
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.29
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.26
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.2
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.18
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.18
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.12
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.11
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.09
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.07
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.05
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.03
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.02
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.94
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.83
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.81
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.77
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.76
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.74
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.73
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.73
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.7
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.67
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.56
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.55
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.52
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.51
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.26
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.22
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.21
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.21
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.18
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.16
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.13
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.12
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.12
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.06
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.04
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.98
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.97
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.93
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.91
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.8
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.75
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.74
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.74
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.7
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.63
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.63
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.6
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.45
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.36
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.35
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.29
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.19
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.18
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.0
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.96
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.94
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.9
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.79
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.77
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.7
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.6
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.6
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.59
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.57
1lnq_A	336	MTHK channels, potassium channel related protein;	96.53
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.52
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.5
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.4
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.37
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.33
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.33
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.32
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	96.28
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.26
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.2
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.06
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.0
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.94
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.83
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	95.82
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.79
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	95.73
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.7
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.65
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.62
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.53
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.49
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	95.28
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.24
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.23
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.2
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.19
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	94.83
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	94.79
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	94.78
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	94.73
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.66
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	94.66
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	94.64
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	94.56
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	94.49
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.39
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	94.3
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	94.29
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	94.28
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	94.27
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	94.23
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	94.15
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	94.0
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	93.93
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	93.8
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	93.76
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	93.71
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	93.69
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	93.15
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	92.91
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	92.79
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	92.77
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	92.77
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	92.75
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	92.74
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	92.73
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	92.72
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	92.65
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	92.64
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	92.63
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	92.61
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	92.59
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	92.54
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	92.5
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	92.35
3qha_A	296	Putative oxidoreductase; seattle structural genomi	92.33
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	92.26
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	92.21
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	92.21
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	92.19
3aw8_A	369	PURK, phosphoribosylaminoimidazole carboxylase, AT	92.09
4ezb_A	317	Uncharacterized conserved protein; structural geno	92.06
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	91.98
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	91.96
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	91.91
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	91.89
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	91.85
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	91.78
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	91.71
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	91.7
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	91.7
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	91.68
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	91.63
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	91.58
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	91.54
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	91.46
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	91.42
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	91.4
4eye_A	342	Probable oxidoreductase; structural genomics, niai	91.34
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	91.2
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	91.12
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	91.08
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	91.05
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	90.95
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	90.93
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	90.92
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	90.89
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	90.84
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	90.82
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	90.82
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	90.79
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	90.72
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	90.65
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	90.64
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	90.64
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	90.61
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	90.6
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	90.6
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	90.47
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	90.47
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	90.44
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	90.35
4g65_A	461	TRK system potassium uptake protein TRKA; structur	90.29
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	90.28
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	90.21
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	90.17
4g6h_A	502	Rotenone-insensitive NADH-ubiquinone oxidoreducta	90.15
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	90.09
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	90.08
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	90.08
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	90.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	89.88
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	89.82
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	89.79
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	89.66
3l07_A	285	Bifunctional protein fold; structural genomics, ID	89.66
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	89.63
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	89.38
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	89.37
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	89.37
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	89.28
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	89.26
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	89.22
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	89.02
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	88.96
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	88.93
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	88.87
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	88.76
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	88.75
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	88.72
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	88.63
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	88.54
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	88.52
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	88.49
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	88.46

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=2e-44  Score=343.96  Aligned_cols=352  Identities=70%  Similarity=1.216  Sum_probs=273.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC-----cEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc---CCCe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP-----WKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ---LTDV   97 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g-----~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V   97 (396)
                      |+|||||||||||++|+++|++     +|     ++|++++|++........+++++.+|++|++++.+++++   +|.|
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~-----~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~v   76 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPL-----ADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHV   76 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTS-----TTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHh-----CCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEE
Confidence            6899999999999999999999     78     999999998654322335789999999999999999998   8889


Q ss_pred             eEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCc
Q 016047           98 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF  177 (396)
Q Consensus        98 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~  177 (396)
                      +|+|+..   ..++...+++|+.++.+++++|++.+++++++++.++..+|.||..+||...+...+++|++|..|....
T Consensus        77 ih~a~~~---~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~  153 (364)
T 2v6g_A           77 FYVTWAN---RSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNF  153 (364)
T ss_dssp             EECCCCC---CSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCH
T ss_pred             EECCCCC---cchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchh
Confidence            9997643   3467788999999999999999987446889998888778888888898642234688899877664455


Q ss_pred             chhHHHHHHHHhhcCCC-eeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHH
Q 016047          178 YYTLEDILFEEVEKKEE-LSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIA  256 (396)
Q Consensus       178 ~y~~e~~l~~~~~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la  256 (396)
                      ||..|+++.++. +..+ ++++++||+.|||+......+......++..+.+..+.++.++|++.+++.+.++.|++++|
T Consensus       154 y~~~E~~~~~~~-~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva  232 (364)
T 2v6g_A          154 YYDLEDIMLEEV-EKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIA  232 (364)
T ss_dssp             HHHHHHHHHHHH-TTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHH
T ss_pred             hHHHHHHHHHHh-hcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHH
Confidence            678899998876 5566 99999999999996544333332222222222222366667788887777778888888889


Q ss_pred             HHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCC-CchhhcCCCCcccCCHHHHhccchHHHHHHHHHh
Q 016047          257 EHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGL-SEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVREN  335 (396)
Q Consensus       257 ~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (396)
                      ++++.++.++...+++||++++..+|++|+++.+++.+|.+...+ ..         .|..+..+++...+.|..+.+.+
T Consensus       233 ~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---------~p~~~~~~~~~~~~~~~~~~~~~  303 (364)
T 2v6g_A          233 EHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEG---------VDLKLQDLMKGKEPVWEEIVREN  303 (364)
T ss_dssp             HHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTT---------CCCCHHHHTTTCHHHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCC---------CCccHHHHHhhhHHHHHHHHHHh
Confidence            999988876555788999999989999999999999999876533 11         56777888887777888887777


Q ss_pred             CCCcccccccccceeehhhhcCcc-cccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047          336 QLQPTRLDEVGAWWFVDLVLTGEA-KLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  396 (396)
Q Consensus       336 ~l~~~~~~~~~~~~~~~~~~~~~~-~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~  396 (396)
                      ++.+..+.++..|.|.++.+.. + ..+|++|++++||+|.++++++|+++++|+++.|+||
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp  364 (364)
T 2v6g_A          304 GLTPTKLKDVGIWWFGDVILGN-ECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP  364 (364)
T ss_dssp             TCCCCCHHHHCCHHHHHHHHTS-CCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCccccccccccchhhhcccc-chhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            7655433332234333333322 4 4689999999999999999999999999999999998

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=3.4e-38  Score=294.52  Aligned_cols=294  Identities=19%  Similarity=0.188  Sum_probs=216.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  103 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~  103 (396)
                      |+|+|||||||||||++|+++|++     +|++|++++|++....  ..+++++.+|+. ++++.++++++|.|+|+|+.
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~--~~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~   72 (311)
T 3m2p_A            1 MSLKIAVTGGTGFLGQYVVESIKN-----DGNTPIILTRSIGNKA--INDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT   72 (311)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCCC-------CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-----CCCEEEEEeCCCCccc--CCceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence            568999999999999999999999     8999999999843322  248899999999 99999999999999999875


Q ss_pred             ccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH--
Q 016047          104 TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--  181 (396)
Q Consensus       104 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~--  181 (396)
                      ....  ++...+++|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|++|..|...  |+.  
T Consensus        73 ~~~~--~~~~~~~~n~~~~~~ll~a~~~~~--~~r~v~~SS~~vy-------g~~--~~~~~~E~~~~~p~~~--Y~~sK  137 (311)
T 3m2p_A           73 RGSQ--GKISEFHDNEILTQNLYDACYENN--ISNIVYASTISAY-------SDE--TSLPWNEKELPLPDLM--YGVSK  137 (311)
T ss_dssp             CCSS--SCGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGC-------CCG--GGCSBCTTSCCCCSSH--HHHHH
T ss_pred             CCCC--ChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHh-------CCC--CCCCCCCCCCCCCCch--hHHHH
Confidence            4333  567788999999999999999875  7788988865555       421  2467889888766443  654  


Q ss_pred             ---HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 016047          182 ---EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  258 (396)
Q Consensus       182 ---e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  258 (396)
                         |+++.++. ++.+++++++||+.|||+..... ++...+...  +  ..+.++.++|++.+.+.++++.|+   |++
T Consensus       138 ~~~E~~~~~~~-~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~--~--~~~~~~~~~g~~~~~~~~v~v~Dv---a~a  208 (311)
T 3m2p_A          138 LACEHIGNIYS-RKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQ--A--FHGEQLTLHANSVAKREFLYAKDA---AKS  208 (311)
T ss_dssp             HHHHHHHHHHH-HHSCCEEEEEEECEEECSCC--C-CHHHHHHHH--H--HTCCCEEESSBCCCCEEEEEHHHH---HHH
T ss_pred             HHHHHHHHHHH-HHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHH--H--HcCCCeEEecCCCeEEceEEHHHH---HHH
Confidence               66666654 45799999999999999543211 222222111  1  136667777888877777777665   788


Q ss_pred             HHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCC
Q 016047          259 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  338 (396)
Q Consensus       259 ~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  338 (396)
                      ++.++..+. .+++||+++++.+|+.|+++.+++.+|.+......          +..                      
T Consensus       209 ~~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~----------~~~----------------------  255 (311)
T 3m2p_A          209 VIYALKQEK-VSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVK----------NPN----------------------  255 (311)
T ss_dssp             HHHHTTCTT-CCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEEC----------SSS----------------------
T ss_pred             HHHHHhcCC-CCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceec----------CCC----------------------
Confidence            887776644 78999999999999999999999999976532110          000                      


Q ss_pred             cccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047          339 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIVP  396 (396)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~~  396 (396)
                       .. ..            ..+..+|++|+++ +||+|+++++++|+++++|+++.+..|
T Consensus       256 -~~-~~------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~  300 (311)
T 3m2p_A          256 -AN-EG------------IHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDVP  300 (311)
T ss_dssp             -BC-CS------------CCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-----
T ss_pred             -CC-CC------------cCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccCc
Confidence             00 00            0145689999998 799999999999999999999888654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=3.4e-38  Score=299.37  Aligned_cols=301  Identities=15%  Similarity=0.113  Sum_probs=219.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC------CC------CCeeEEEecCCChHHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------AD------HLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~------~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ++|+|||||||||||++|+++|++     +|++|++++|.+.....      ..      .+++++.+|+.|++++.+++
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLK-----LNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            458999999999999999999999     89999999997653210      00      57899999999999999999


Q ss_pred             hcCCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           92 SQLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                      +++|.|+|+|+......  .++...+++|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|++
T Consensus        99 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vy-------g~~--~~~~~~E~~  167 (351)
T 3ruf_A           99 KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTY-------GDH--PALPKVEEN  167 (351)
T ss_dssp             TTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGG-------TTC--CCSSBCTTC
T ss_pred             cCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhc-------CCC--CCCCCccCC
Confidence            99999999987532211  2566788999999999999999874  7789988865544       432  256788998


Q ss_pred             CCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc---hhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047          170 PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIPLRFPGTKA  241 (396)
Q Consensus       170 p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~g~~~  241 (396)
                      +..|...  |+.     |+++..+. ++.+++++++||++|||+......   .+...+..  .+.  .+.++.++|++.
T Consensus       168 ~~~p~~~--Y~~sK~~~E~~~~~~~-~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~g~g~  240 (351)
T 3ruf_A          168 IGNPLSP--YAVTKYVNEIYAQVYA-RTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTA--AML--KGDDVYINGDGE  240 (351)
T ss_dssp             CCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHH--HHH--HTCCCEEESSSC
T ss_pred             CCCCCCh--hHHHHHHHHHHHHHHH-HHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHH--HHH--cCCCcEEeCCCC
Confidence            8766443  654     55555554 456899999999999995432211   22222211  111  255667778887


Q ss_pred             ccceeeecccHHHHHHHHHHHhcC-CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047          242 AWECYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  320 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~-~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  320 (396)
                      +.+.++++.|+   |++++.++.. +...+++||++++..+|+.|+++.+++.+|.+......          +..    
T Consensus       241 ~~~~~i~v~Dv---a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~----------~~~----  303 (351)
T 3ruf_A          241 TSRDFCYIDNV---IQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKL----------SIK----  303 (351)
T ss_dssp             CEECCEEHHHH---HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC---------------E----
T ss_pred             eEEeeEEHHHH---HHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccc----------ccc----
Confidence            77777777665   7887777765 45678999999999999999999999999985332110          000    


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                   .....+..               ..+..+|++|+++ +||+|+++++++|+++++||++.
T Consensus       304 -------------~~~~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  348 (351)
T 3ruf_A          304 -------------YREFRSGD---------------VRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF  348 (351)
T ss_dssp             -------------EECCCTTC---------------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             -------------ccCCCCCc---------------cceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence                         00000000               0145689999997 79999999999999999999863

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2.5e-37  Score=293.00  Aligned_cols=293  Identities=16%  Similarity=0.141  Sum_probs=216.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  103 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~  103 (396)
                      .+|+|||||||||||++|+++|++     +|++|++++|.+..     .+++++.+|+.|++++.++++++|.|+|+|+.
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~   87 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRT-----QGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAF   87 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHH-----TTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHh-----CCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence            458999999999999999999999     89999999998654     57889999999999999999999999999876


Q ss_pred             ccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH--
Q 016047          104 TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--  181 (396)
Q Consensus       104 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~--  181 (396)
                      ...........+++|+.|+.+++++|++.+  +++++++||..+|       |...+...+++|+++..|...  |+.  
T Consensus        88 ~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~V~~SS~~vy-------g~~~~~~~~~~E~~~~~~~~~--Y~~sK  156 (347)
T 4id9_A           88 MSWAPADRDRMFAVNVEGTRRLLDAASAAG--VRRFVFASSGEVY-------PENRPEFLPVTEDHPLCPNSP--YGLTK  156 (347)
T ss_dssp             CCSSGGGHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGT-------TTTSCSSSSBCTTSCCCCCSH--HHHHH
T ss_pred             cCcchhhHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEECCHHHh-------CCCCCCCCCcCCCCCCCCCCh--HHHHH
Confidence            544444557889999999999999999864  7789988876544       432223567889988666444  654  


Q ss_pred             ---HHHHHHHhhcCCCeeEEEEcCCcee-------------ecCCCCc----------chhHHHHHHHHHHhhhcCCCce
Q 016047          182 ---EDILFEEVEKKEELSWSVHRPDTIF-------------GFSPYSL----------MNLVGALCVYAAVCKHEGIPLR  235 (396)
Q Consensus       182 ---e~~l~~~~~~~~~~~~~ilRp~~v~-------------G~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~  235 (396)
                         |+++..+. ++.+++++++||+.||             |+.....          ..+...+   +. ....+.++.
T Consensus       157 ~~~E~~~~~~~-~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~  231 (347)
T 4id9_A          157 LLGEELVRFHQ-RSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAEL---LQ-SRDIGEPSH  231 (347)
T ss_dssp             HHHHHHHHHHH-HHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHH---HH-HHCCSSCCE
T ss_pred             HHHHHHHHHHH-HhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHH---HH-HHHcCCCeE
Confidence               66666554 5678999999999999             7321100          1111111   11 112355666


Q ss_pred             ecCCcccccee-eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 016047          236 FPGTKAAWECY-SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR  314 (396)
Q Consensus       236 ~~g~~~~~~~~-~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~  314 (396)
                      +.|++.+.+.+ .++.+++++|++++.++..+...+++||++++..+|+.|+++.+++.+|.+.....            
T Consensus       232 ~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~------------  299 (347)
T 4id9_A          232 ILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVD------------  299 (347)
T ss_dssp             EEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEE------------
T ss_pred             EeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceee------------
Confidence            66766666666 22234444588888888776567899999999999999999999999997643210            


Q ss_pred             CCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          315 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      +                      +....                ...+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       300 ~----------------------p~~~~----------------~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  340 (347)
T 4id9_A          300 F----------------------PGDGV----------------YYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQR  340 (347)
T ss_dssp             C----------------------SSCCC----------------BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             C----------------------CCccc----------------ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence            0                      00000                23579999997 79999999999999999999764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.6e-36  Score=287.36  Aligned_cols=296  Identities=13%  Similarity=0.098  Sum_probs=215.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      +|+|||||||||||++|+++|++     .|  ++|++++|.....       ....++++++.+|++|++.+.+++++  
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   98 (346)
T 4egb_A           24 AMNILVTGGAGFIGSNFVHYMLQ-----SYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERD   98 (346)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHH-----HCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             CCeEEEECCccHHHHHHHHHHHh-----hCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence            37999999999999999999998     67  7899999865321       11235899999999999999999998  


Q ss_pred             CCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC
Q 016047           94 LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  171 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~  171 (396)
                      +|.|+|+|+......  .++...+++|+.|+.+++++|++.+  +++++++||..+|+..        +...+++|++|.
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vy~~~--------~~~~~~~E~~~~  168 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP--HIKLVQVSTDEVYGSL--------GKTGRFTEETPL  168 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST--TSEEEEEEEGGGGCCC--------CSSCCBCTTSCC
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeCchHHhCCC--------CcCCCcCCCCCC
Confidence            899999988654322  3567788999999999999999874  7889988876555432        125678899887


Q ss_pred             CCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 016047          172 LDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  246 (396)
Q Consensus       172 ~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  246 (396)
                      .|...  |+.     |+++.++. ++.+++++++||+.|||+... ...+...+..  .+  ..+.++.++|++.+.+.+
T Consensus       169 ~p~~~--Y~~sK~~~E~~~~~~~-~~~g~~~~ilRp~~v~G~~~~-~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~  240 (346)
T 4egb_A          169 APNSP--YSSSKASADMIALAYY-KTYQLPVIVTRCSNNYGPYQY-PEKLIPLMVT--NA--LEGKKLPLYGDGLNVRDW  240 (346)
T ss_dssp             CCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEESTTCC-TTSHHHHHHH--HH--HTTCCCEEETTSCCEECE
T ss_pred             CCCCh--hHHHHHHHHHHHHHHH-HHhCCCEEEEeecceeCcCCC-ccchHHHHHH--HH--HcCCCceeeCCCCeEEee
Confidence            66544  654     66666654 456899999999999994322 1122222211  11  135566777888777777


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchH
Q 016047          247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  326 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (396)
                      +++.|+   |++++.++..+. .+++||++++..+|+.|+++.+++.+|.+...+..           ..          
T Consensus       241 i~v~Dv---a~a~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------~~----------  295 (346)
T 4egb_A          241 LHVTDH---CSAIDVVLHKGR-VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEY-----------VT----------  295 (346)
T ss_dssp             EEHHHH---HHHHHHHHHHCC-TTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEE-----------EC----------
T ss_pred             EEHHHH---HHHHHHHHhcCC-CCCEEEECCCCceeHHHHHHHHHHHhCCCcccccc-----------cC----------
Confidence            777775   777777776544 78899999999999999999999999986542110           00          


Q ss_pred             HHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCC
Q 016047          327 VWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK  393 (396)
Q Consensus       327 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~  393 (396)
                                   .....            ...+.+|++|+++ |||+|.++++++|+++++||++.+
T Consensus       296 -------------~~~~~------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  338 (346)
T 4egb_A          296 -------------DRLGH------------DRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNE  338 (346)
T ss_dssp             -------------C--CC------------CSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCH
T ss_pred             -------------CCCCC------------cceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhh
Confidence                         00000            0134589999985 799999999999999999998753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-36  Score=283.90  Aligned_cols=293  Identities=16%  Similarity=0.173  Sum_probs=210.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |+|||||||||||++|+++|++     +| .|++++++.... .....+++++.+|+.| +++.++++++|.|+|+|+..
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~-----~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~   74 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSE-----SN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANP   74 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTT-----TS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHh-----CC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCC
Confidence            5899999999999999999999     78 555566544321 1123578999999999 88999999999999998854


Q ss_pred             cCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH-
Q 016047          105 WTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-  181 (396)
Q Consensus       105 ~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-  181 (396)
                      ...  ..++...+++|+.|+.+++++|++.+  +++++++||..+|       |..  ...+++|+.|..|...  |+. 
T Consensus        75 ~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~iv~~SS~~vy-------g~~--~~~~~~E~~~~~~~~~--Y~~s  141 (313)
T 3ehe_A           75 DVRIGAENPDEIYRNNVLATYRLLEAMRKAG--VSRIVFTSTSTVY-------GEA--KVIPTPEDYPTHPISL--YGAS  141 (313)
T ss_dssp             CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEECCGGGG-------CSC--SSSSBCTTSCCCCCSH--HHHH
T ss_pred             ChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEeCchHHh-------CcC--CCCCCCCCCCCCCCCH--HHHH
Confidence            332  23678889999999999999998865  6788888765544       432  2567888887665443  654 


Q ss_pred             ----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 016047          182 ----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  257 (396)
Q Consensus       182 ----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  257 (396)
                          |+++..+. .+.+++++++||+.|||+  +........+..  .+.+ ...++...|++.+.+.++++.|+   |+
T Consensus       142 K~~~e~~~~~~~-~~~g~~~~ilRp~~v~G~--~~~~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~i~v~Dv---a~  212 (313)
T 3ehe_A          142 KLACEALIESYC-HTFDMQAWIYRFANVIGR--RSTHGVIYDFIM--KLKR-NPEELEILGNGEQNKSYIYISDC---VD  212 (313)
T ss_dssp             HHHHHHHHHHHH-HHTTCEEEEEECSCEEST--TCCCSHHHHHHH--HHHH-CTTEEEESTTSCCEECCEEHHHH---HH
T ss_pred             HHHHHHHHHHHH-HhcCCCEEEEeeccccCc--CCCcChHHHHHH--HHHc-CCCceEEeCCCCeEEeEEEHHHH---HH
Confidence                56666554 567999999999999994  332222222211  1111 22455678888877777777776   77


Q ss_pred             HHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCC
Q 016047          258 HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQL  337 (396)
Q Consensus       258 ~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  337 (396)
                      +++.++. +...+++||++++..+|++|+++.+++.+|.+....             .....               .+.
T Consensus       213 a~~~~~~-~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-------------~~~~~---------------~~~  263 (313)
T 3ehe_A          213 AMLFGLR-GDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFR-------------FTGGD---------------RGW  263 (313)
T ss_dssp             HHHHHTT-CCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEE-------------EC---------------------
T ss_pred             HHHHHhc-cCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceE-------------ECCCc---------------cCC
Confidence            8777765 456689999999999999999999999999764321             00000               000


Q ss_pred             CcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhC
Q 016047          338 QPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                       +..               .....+|++|+++|||+|+++++++|+++++|+++.
T Consensus       264 -~~~---------------~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~  302 (313)
T 3ehe_A          264 -KGD---------------VPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVED  302 (313)
T ss_dssp             ----------------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHHH
T ss_pred             -ccc---------------cceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHhC
Confidence             000               013457999999999999999999999999999864

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=4.4e-37  Score=286.91  Aligned_cols=299  Identities=16%  Similarity=0.081  Sum_probs=211.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |+|||||||||||++|+++|++     +|++|++++|.+.... ....+++++.+|+.|++ +.+++++ |.|+|+|+..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~   73 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVE-----LGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANP   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHh-----CCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCC
Confidence            5899999999999999999999     8999999999764421 12367899999999998 8888887 8899998754


Q ss_pred             cCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH-
Q 016047          105 WTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-  181 (396)
Q Consensus       105 ~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-  181 (396)
                      ...  ..++...+++|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|+.|..|...  |+. 
T Consensus        74 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~vy-------g~~--~~~~~~e~~~~~p~~~--Y~~s  140 (312)
T 3ko8_A           74 EVRLSTTEPIVHFNENVVATFNVLEWARQTG--VRTVVFASSSTVY-------GDA--DVIPTPEEEPYKPISV--YGAA  140 (312)
T ss_dssp             SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGG-------CSC--SSSSBCTTSCCCCCSH--HHHH
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeCcHHHh-------CCC--CCCCCCCCCCCCCCCh--HHHH
Confidence            332  23577888999999999999998864  6788888866555       431  2467888887666443  664 


Q ss_pred             ----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 016047          182 ----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  257 (396)
Q Consensus       182 ----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  257 (396)
                          |+++..+. ++.+++++++||++|||+  +........+..  .+.. ...++...|++.+.+.++++.|+   |+
T Consensus       141 K~~~e~~~~~~~-~~~g~~~~~lrp~~v~g~--~~~~~~~~~~~~--~~~~-~~~~~~~~~~g~~~~~~i~v~Dv---a~  211 (312)
T 3ko8_A          141 KAAGEVMCATYA-RLFGVRCLAVRYANVVGP--RLRHGVIYDFIM--KLRR-NPNVLEVLGDGTQRKSYLYVRDA---VE  211 (312)
T ss_dssp             HHHHHHHHHHHH-HHHCCEEEEEEECEEECT--TCCSSHHHHHHH--HHHH-CTTEEEEC----CEECEEEHHHH---HH
T ss_pred             HHHHHHHHHHHH-HHhCCCEEEEeeccccCc--CCCCChHHHHHH--HHHh-CCCCeEEcCCCCeEEeeEEHHHH---HH
Confidence                55555554 456899999999999994  322222222211  1111 22445667887777777777776   77


Q ss_pred             HHHHHhcC---CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHH
Q 016047          258 HQIWAAVD---PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRE  334 (396)
Q Consensus       258 ~~i~~~~~---~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (396)
                      +++.++..   +...+++||++++..+|+.|+++.+++.+|.+....            .++...             ..
T Consensus       212 a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~------------~~~~~~-------------~~  266 (312)
T 3ko8_A          212 ATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIR------------LVPSTP-------------DG  266 (312)
T ss_dssp             HHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEE------------EC-------------------
T ss_pred             HHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCcee------------ecCccc-------------cc
Confidence            77777655   456689999999999999999999999999765321            111000             00


Q ss_pred             hCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCC
Q 016047          335 NQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKI  394 (396)
Q Consensus       335 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~  394 (396)
                      .+. +..               .....+|++|+++ |||+|+++++++|+++++|+++.+|
T Consensus       267 ~~~-~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~  311 (312)
T 3ko8_A          267 RGW-PGD---------------VKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKELW  311 (312)
T ss_dssp             -----CC---------------CSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred             cCC-CCC---------------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhc
Confidence            000 000               0134589999964 7999999999999999999998876

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1e-36  Score=291.57  Aligned_cols=310  Identities=14%  Similarity=0.207  Sum_probs=215.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCCC--CCCCCCeeEEEecCC-ChHHHHHHHhcCCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--WNADHLVEYVQCDVS-DPEETQAKLSQLTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~-d~~~~~~~~~~~~~V~h   99 (396)
                      +.|+|||||||||||++|+++|++     + ||+|++++|++...  .....+++++.+|++ |.+.+.++++++|.|+|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~-----~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih   97 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILE-----TTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP   97 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHH-----HSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHh-----CCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence            347999999999999999999998     6 89999999986542  112368999999999 99999999999999999


Q ss_pred             EEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC---C-
Q 016047          100 IFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL---D-  173 (396)
Q Consensus       100 ~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~---~-  173 (396)
                      +|+......  .++.+.+++|+.++.+++++|++.+   ++++++||..+|       |..  ...+++|+++..   | 
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~v~~SS~~vy-------g~~--~~~~~~e~~~~~~~~p~  165 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVY-------GMC--ADEQFDPDASALTYGPI  165 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT---CEEEEECCGGGG-------BSC--CCSSBCTTTCCEEECCT
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEeCcHHHh-------CCC--CCCCCCccccccccCCC
Confidence            987543221  2567788999999999999999875   688888765544       432  245667776431   1 


Q ss_pred             -CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC-------cchhHHHHHHHHHHhhhcCCCceecCCc
Q 016047          174 -APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS-------LMNLVGALCVYAAVCKHEGIPLRFPGTK  240 (396)
Q Consensus       174 -~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~g~~  240 (396)
                       .+...|+.     |+++.++. +. +++++++||++|||+....       ...+...+..  .+.  .+.++.+++++
T Consensus       166 ~~p~~~Y~~sK~~~E~~~~~~~-~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~g  239 (372)
T 3slg_A          166 NKPRWIYACSKQLMDRVIWGYG-ME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLG--HIV--RGENISLVDGG  239 (372)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHH-TT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHH--HHH--HTCCEEEGGGG
T ss_pred             CCCCCcHHHHHHHHHHHHHHHH-HC-CCCEEEEccccccCCCcccccccccccchHHHHHHH--HHH--cCCCcEEeCCC
Confidence             12234664     66666654 44 9999999999999964321       1112222211  111  35667778877


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCC-CeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCH
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL  317 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~-~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  317 (396)
                      .+.+.++++.|+   |++++.++..+.  ..+++||++++ ..+|+.|+++.+++.+|.+.....              .
T Consensus       240 ~~~~~~i~v~Dv---a~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~--------------~  302 (372)
T 3slg_A          240 SQKRAFTYVDDG---ISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYAD--------------S  302 (372)
T ss_dssp             CCEEECEEHHHH---HHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHH--------------H
T ss_pred             ceEEEEEEHHHH---HHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCccccc--------------c
Confidence            777777777665   788888777654  57899999994 799999999999999997643210              0


Q ss_pred             HHHhccchHHHHHHHHHhCCCcccccccccceeehhh-hcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          318 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLV-LTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      +....              +.+...     ..+.... .......+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       303 ~~~~~--------------~~~~~~-----~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          303 AKRVK--------------LVETTS-----GAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             HHTCC--------------EEEC------------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             cccce--------------eeeccc-----cccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            00000              000000     0000000 000145689999987 69999999999999999999864

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-36  Score=282.67  Aligned_cols=299  Identities=17%  Similarity=0.124  Sum_probs=213.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--------CCCCeeEEEecCCChHHHHHHHh--c
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------ADHLVEYVQCDVSDPEETQAKLS--Q   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~--~   93 (396)
                      ++|+|||||||||||++|+++|++     +|++|++++|++.....        ...+++++.+|++|++++.++++  +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLA-----HGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHH-----CCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccC
Confidence            457999999999999999999999     89999999997654210        02478899999999999999998  7


Q ss_pred             CCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC
Q 016047           94 LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  171 (396)
Q Consensus        94 ~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~  171 (396)
                      +|.|+|+|+.....  ...+.+.+++|+.++.+++++|++.+  +.+++++||..+|       |..  ...+++|+.|.
T Consensus        79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~-------g~~--~~~~~~e~~~~  147 (341)
T 3enk_A           79 ITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA--VKRIVFSSSATVY-------GVP--ERSPIDETFPL  147 (341)
T ss_dssp             CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGB-------CSC--SSSSBCTTSCC
T ss_pred             CcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC--CCEEEEEecceEe-------cCC--CCCCCCCCCCC
Confidence            89999998753221  12456788999999999999999864  6788888765544       421  25678888876


Q ss_pred             CCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC---------cchhHHHHHHHHHHhhhcCCCceec
Q 016047          172 LDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKHEGIPLRFP  237 (396)
Q Consensus       172 ~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~  237 (396)
                      .|...  |+.     |+++..+..+..+++++++||++|||+.+..         ...+...+   .....+...++...
T Consensus       148 ~~~~~--Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  222 (341)
T 3enk_A          148 SATNP--YGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYV---AQVAVGKLEKLRVF  222 (341)
T ss_dssp             BCSSH--HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHH---HHHHHTSSSCEEEE
T ss_pred             CCCCh--hHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHH---HHHHhcCCCceEEe
Confidence            65443  664     5555555423335999999999999964321         01122211   11122223445555


Q ss_pred             C------CccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCC
Q 016047          238 G------TKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGG  309 (396)
Q Consensus       238 g------~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~  309 (396)
                      |      ++.+.++++|+.|+   |++++.++..  +...+++||+++++.+|++|+++.+++.+|.+.....       
T Consensus       223 g~~~~~~~g~~~~~~i~v~Dv---a~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-------  292 (341)
T 3enk_A          223 GSDYPTPDGTGVRDYIHVVDL---ARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYEL-------  292 (341)
T ss_dssp             CSCSSSTTSSCEECEEEHHHH---HHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEE-------
T ss_pred             CCccCCCCCCeeEeeEEHHHH---HHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceee-------
Confidence            5      66677777777776   6776666654  2356899999999999999999999999997643210       


Q ss_pred             CCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHH
Q 016047          310 GGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDK  388 (396)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~  388 (396)
                           .+                    ..+...               ....+|++|+++ |||+|+++++++|+++++|
T Consensus       293 -----~~--------------------~~~~~~---------------~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~  332 (341)
T 3enk_A          293 -----VA--------------------RRPGDV---------------AECYANPAAAAETIGWKAERDLERMCADHWRW  332 (341)
T ss_dssp             -----EC--------------------CCTTCC---------------SEECBCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_pred             -----CC--------------------CCCCCc---------------cccccCHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence                 00                    000000               134579999985 7999999999999999999


Q ss_pred             HhhCC
Q 016047          389 VKGFK  393 (396)
Q Consensus       389 ~~~~~  393 (396)
                      +++..
T Consensus       333 ~~~~~  337 (341)
T 3enk_A          333 QENNP  337 (341)
T ss_dssp             HHHST
T ss_pred             HHhcC
Confidence            98764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.8e-35  Score=277.27  Aligned_cols=318  Identities=14%  Similarity=0.091  Sum_probs=204.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |+|||||||||||++|+++|++     +|++|++++|++.... ....+++++.+|+.|++++.++++++|.|+|+|+..
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   88 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRA-----AGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYY   88 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC----
T ss_pred             CEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccC
Confidence            5899999999999999999999     8999999999865321 111378899999999999999999999999998854


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCC--CcchhH-
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP--NFYYTL-  181 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~--~~~y~~-  181 (396)
                      .....++...+++|+.++.+++++|++.+  +++++++||..+|+.       ......+ +|++|..|..  ...|+. 
T Consensus        89 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~~-------~~~~~~~-~E~~~~~p~~~~~~~Y~~s  158 (342)
T 2x4g_A           89 PSRPRRWQEEVASALGQTNPFYAACLQAR--VPRILYVGSAYAMPR-------HPQGLPG-HEGLFYDSLPSGKSSYVLC  158 (342)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHT--CSCEEEECCGGGSCC-------CTTSSCB-CTTCCCSSCCTTSCHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEECCHHhhCc-------CCCCCCC-CCCCCCCccccccChHHHH
Confidence            33234567788999999999999999874  678888886655532       1111134 7887766621  334664 


Q ss_pred             ----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 016047          182 ----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  257 (396)
Q Consensus       182 ----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  257 (396)
                          |+++..+. +. +++++++||+.|||+..... .. ..+..  .+.  .+.+..+   +.+...++++.|+   |+
T Consensus       159 K~~~e~~~~~~~-~~-g~~~~ilrp~~v~g~~~~~~-~~-~~~~~--~~~--~~~~~~~---~~~~~~~i~v~Dv---a~  224 (342)
T 2x4g_A          159 KWALDEQAREQA-RN-GLPVVIGIPGMVLGELDIGP-TT-GRVIT--AIG--NGEMTHY---VAGQRNVIDAAEA---GR  224 (342)
T ss_dssp             HHHHHHHHHHHH-HT-TCCEEEEEECEEECSCCSSC-ST-THHHH--HHH--TTCCCEE---ECCEEEEEEHHHH---HH
T ss_pred             HHHHHHHHHHHh-hc-CCcEEEEeCCceECCCCccc-cH-HHHHH--HHH--cCCCccc---cCCCcceeeHHHH---HH
Confidence                55555554 45 89999999999999543111 11 11211  112  2333333   3344456665554   77


Q ss_pred             HHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCC
Q 016047          258 HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQL  337 (396)
Q Consensus       258 ~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  337 (396)
                      +++.++.++.. +++||++++. +|+.|+++.+.+.+|.+... .          .+...........+.+..   ..+.
T Consensus       225 ~~~~~~~~~~~-g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~----------~p~~~~~~~~~~~~~~~~---~~~~  288 (342)
T 2x4g_A          225 GLLMALERGRI-GERYLLTGHN-LEMADLTRRIAELLGQPAPQ-P----------MSMAMARALATLGRLRYR---VSGQ  288 (342)
T ss_dssp             HHHHHHHHSCT-TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-E----------ECHHHHHHHHHHHHC----------
T ss_pred             HHHHHHhCCCC-CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-c----------CCHHHHHHHHHHHHHHHH---hhCC
Confidence            77777765444 8899999988 99999999999999976432 1          111111111110000000   0010


Q ss_pred             CcccccccccceeehhhhcCcccccchhhHhh-cCC-CccccCHHHHHHHHHHHhhCCCCC
Q 016047          338 QPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGF-SGFRNSKNSFITWIDKVKGFKIVP  396 (396)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~-~p~~~~~~~~~~~~~~~~~~~~~~  396 (396)
                       +..+..    ....  ....+..+|++|+++ +|| +| ++++++|+++++|+++.|+++
T Consensus       289 -~~~~~~----~~~~--~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~~  341 (342)
T 2x4g_A          289 -LPLLDE----TAIE--VMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYFN  341 (342)
T ss_dssp             --------------C--CTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCCC
T ss_pred             -CCCCCH----HHHH--HHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCCC
Confidence             000000    0000  001145689999987 699 99 999999999999999999875

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=7.6e-35  Score=272.84  Aligned_cols=298  Identities=16%  Similarity=0.107  Sum_probs=210.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a  101 (396)
                      ..++|||||||||||++|+++|++     +|++|++++|++....   .+++++.+|++|++++.+++++  +|.|+|+|
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTE-----QNVEVFGTSRNNEAKL---PNVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCTTCCC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CcceEEEECCCChHHHHHHHHHHH-----CCCEEEEEecCCcccc---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            347999999999999999999998     8999999999865421   2788999999999999999987  88999998


Q ss_pred             EeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047          102 YVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  179 (396)
Q Consensus       102 ~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y  179 (396)
                      +.....  ..++...+++|+.|+.+++++|++.+ ++.+++++||..+|+..       .+...+++|++|..+..  .|
T Consensus        83 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~-------~~~~~~~~E~~~~~~~~--~Y  152 (321)
T 2pk3_A           83 AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSN-LDCRILTIGSSEEYGMI-------LPEESPVSEENQLRPMS--PY  152 (321)
T ss_dssp             SCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-CCCEEEEEEEGGGTBSC-------CGGGCSBCTTSCCBCCS--HH
T ss_pred             cccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEccHHhcCCC-------CCCCCCCCCCCCCCCCC--cc
Confidence            753321  22567789999999999999997652 36788888866555321       00245788888765543  36


Q ss_pred             hH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhh-hcC--CCceecCCccccceeeeccc
Q 016047          180 TL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK-HEG--IPLRFPGTKAAWECYSIASD  251 (396)
Q Consensus       180 ~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~-~~~--~~~~~~g~~~~~~~~~~~~d  251 (396)
                      +.     |+++..+. ++.+++++++||++|||+.... ..+...+...  +.. ..+  .++...+++.+...++++.|
T Consensus       153 ~~sK~~~E~~~~~~~-~~~gi~~~ilrp~~v~g~~~~~-~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~v~v~D  228 (321)
T 2pk3_A          153 GVSKASVGMLARQYV-KAYGMDIIHTRTFNHIGPGQSL-GFVTQDFAKQ--IVDIEMEKQEPIIKVGNLEAVRDFTDVRD  228 (321)
T ss_dssp             HHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECTTCCT-TSHHHHHHHH--HHHHHTTSSCSEEEESCSSCEEEEEEHHH
T ss_pred             HHHHHHHHHHHHHHH-HHcCCCEEEEEeCcccCcCCCC-CchHHHHHHH--HHHHhcCCCCCeEEeCCCCcEEeeEEHHH
Confidence            64     55555543 4458999999999999953321 1122222111  111 113  45556676666666776666


Q ss_pred             HHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHH
Q 016047          252 ADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEI  331 (396)
Q Consensus       252 a~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (396)
                      +   |++++.++..+ ..+++||++++..+|++|+++.+.+.+|.+....            ..+  .+           
T Consensus       229 v---a~a~~~~~~~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~------------~~p--~~-----------  279 (321)
T 2pk3_A          229 I---VQAYWLLSQYG-KTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTE------------LNP--LQ-----------  279 (321)
T ss_dssp             H---HHHHHHHHHHC-CTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEE------------ECG--GG-----------
T ss_pred             H---HHHHHHHHhCC-CCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCcee------------ecc--cc-----------
Confidence            5   77777776554 4578999999999999999999999999764321            000  00           


Q ss_pred             HHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          332 VRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       332 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                           ..+..               .....+|++|+++ |||+|.++++++|+++++|+++.
T Consensus       280 -----~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  321 (321)
T 2pk3_A          280 -----LRPSE---------------VPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQA  321 (321)
T ss_dssp             -----CCSSC---------------CSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHTC
T ss_pred             -----CCCcc---------------cchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhcC
Confidence                 00000               0135689999987 69999999999999999999863

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=7e-35  Score=274.74  Aligned_cols=305  Identities=15%  Similarity=0.138  Sum_probs=208.6

Q ss_pred             cCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------CCCCCeeEEEecCCChHHHHHH
Q 016047           18 DEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        18 ~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      ...+.+++++|||||||||||++|+++|++     +|++|++++|++....       ....+++++.+|++|++++.++
T Consensus         7 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   81 (335)
T 1rpn_A            7 HHHHGSMTRSALVTGITGQDGAYLAKLLLE-----KGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRA   81 (335)
T ss_dssp             --------CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHH
T ss_pred             cccccccCCeEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHH
Confidence            345677889999999999999999999999     7999999999865321       0124788999999999999999


Q ss_pred             Hhc--CCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           91 LSQ--LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        91 ~~~--~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      +++  +|.|+|+|+.....  ..++...+++|+.|+.+++++|++.+. ..+++++||..+|       |..  ...+++
T Consensus        82 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~v~~SS~~v~-------g~~--~~~~~~  151 (335)
T 1rpn_A           82 VIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEMF-------GLI--QAERQD  151 (335)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGGG-------CSC--SSSSBC
T ss_pred             HHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeCHHHh-------CCC--CCCCCC
Confidence            987  48899998753321  235678899999999999999998641 2688888765544       432  135788


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHH-HHHHHHHhhhcCC-CceecCC
Q 016047          167 EDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGA-LCVYAAVCKHEGI-PLRFPGT  239 (396)
Q Consensus       167 E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~i~~~~~~-~~~~~g~  239 (396)
                      |++|..|...  |+.     |+++..+. ++.+++++++||+++||+  +...++... +..++... ..+. +....|+
T Consensus       152 E~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~~~~~~i~r~~~v~Gp--~~~~~~~~~~~~~~~~~~-~~g~~~~~~~g~  225 (335)
T 1rpn_A          152 ENTPFYPRSP--YGVAKLYGHWITVNYR-ESFGLHASSGILFNHESP--LRGIEFVTRKVTDAVARI-KLGKQQELRLGN  225 (335)
T ss_dssp             TTSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECT--TSCTTSHHHHHHHHHHHH-HTTSCSCEEESC
T ss_pred             cccCCCCCCh--hHHHHHHHHHHHHHHH-HHcCCcEEEEeeCcccCC--CCCCCcchHHHHHHHHHH-HcCCCceEEeCC
Confidence            8887665433  664     55555543 455899999999999994  332222111 11111111 1233 3344577


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHH
Q 016047          240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  319 (396)
Q Consensus       240 ~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  319 (396)
                      +.+.+.++++.|+   |++++.++..+.  +++||++++..+|++|+++.+.+.+|.+....           .++..  
T Consensus       226 g~~~~~~i~v~Dv---a~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~-----------~~~~~--  287 (335)
T 1rpn_A          226 VDAKRDWGFAGDY---VEAMWLMLQQDK--ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDF-----------LKIDP--  287 (335)
T ss_dssp             TTCEEECEEHHHH---HHHHHHHHHSSS--CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGT-----------EEECG--
T ss_pred             CcceeceEEHHHH---HHHHHHHHhcCC--CCEEEEeCCCCccHHHHHHHHHHHhCCCcccc-----------ccccc--
Confidence            7777777776665   778777776543  48899999999999999999999998753210           00000  


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          320 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       320 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                                     ....+..               .....+|++|+++ +||+|.++++++|+++++|+++
T Consensus       288 ---------------~~~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~  330 (335)
T 1rpn_A          288 ---------------AFFRPAE---------------VDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR  330 (335)
T ss_dssp             ---------------GGCCSSC---------------CCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             ---------------cccCCCc---------------chhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHH
Confidence                           0000100               0134579999986 7999999999999999999975

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-35  Score=272.20  Aligned_cols=280  Identities=14%  Similarity=0.118  Sum_probs=200.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h~  100 (396)
                      .|+|+|||||||||||++|+++|++     +|++|++++|.              ++|+.|++.+.++++  ++|.|+|+
T Consensus         3 ~M~m~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~--------------~~D~~d~~~~~~~~~~~~~d~vi~~   63 (287)
T 3sc6_A            3 AMKERVIITGANGQLGKQLQEELNP-----EEYDIYPFDKK--------------LLDITNISQVQQVVQEIRPHIIIHC   63 (287)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHSCT-----TTEEEEEECTT--------------TSCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cceeEEEEECCCCHHHHHHHHHHHh-----CCCEEEEeccc--------------ccCCCCHHHHHHHHHhcCCCEEEEC
Confidence            3656999999999999999999999     89999999993              489999999999998  58999999


Q ss_pred             EEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcc
Q 016047          101 FYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  178 (396)
Q Consensus       101 a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~  178 (396)
                      |+......  .++...+++|+.++.+++++|++.+  + +++++||..+       ||..  ...|++|++|..|..  .
T Consensus        64 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~v~~SS~~v-------y~~~--~~~~~~E~~~~~p~~--~  129 (287)
T 3sc6_A           64 AAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG--A-KLVYISTDYV-------FQGD--RPEGYDEFHNPAPIN--I  129 (287)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT--C-EEEEEEEGGG-------SCCC--CSSCBCTTSCCCCCS--H
T ss_pred             CcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEchhhh-------cCCC--CCCCCCCCCCCCCCC--H
Confidence            87543221  3677889999999999999999875  3 5777776544       4432  256889998876644  3


Q ss_pred             hhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 016047          179 YTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  258 (396)
Q Consensus       179 y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  258 (396)
                      |+..|...+...+....+++++||+.|||+...   ++...+.   ... ..+.++...|+  +...++++.|+   |++
T Consensus       130 Y~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~---~~~~~~~---~~~-~~~~~~~~~~~--~~~~~i~v~Dv---a~~  197 (287)
T 3sc6_A          130 YGASKYAGEQFVKELHNKYFIVRTSWLYGKYGN---NFVKTMI---RLG-KEREEISVVAD--QIGSPTYVADL---NVM  197 (287)
T ss_dssp             HHHHHHHHHHHHHHHCSSEEEEEECSEECSSSC---CHHHHHH---HHH-TTCSEEEEECS--CEECCEEHHHH---HHH
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEeeeeecCCCCC---cHHHHHH---HHH-HcCCCeEeecC--cccCceEHHHH---HHH
Confidence            776555444433333457899999999994322   2222221   111 12445555554  45566665554   888


Q ss_pred             HHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCC
Q 016047          259 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  338 (396)
Q Consensus       259 ~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  338 (396)
                      ++.++.++.  +++||++++..+|++|+++.+++.+|.+...            .+++..++               ...
T Consensus       198 ~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~------------~~~~~~~~---------------~~~  248 (287)
T 3sc6_A          198 INKLIHTSL--YGTYHVSNTGSCSWFEFAKKIFSYANMKVNV------------LPVSTEEF---------------GAA  248 (287)
T ss_dssp             HHHHHTSCC--CEEEECCCBSCEEHHHHHHHHHHHHTCCCEE------------EEECHHHH---------------CCS
T ss_pred             HHHHHhCCC--CCeEEEcCCCcccHHHHHHHHHHHcCCCcce------------eeeehhhc---------------Ccc
Confidence            888776654  7899999999999999999999999987432            22332221               100


Q ss_pred             cccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhh
Q 016047          339 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                      ...               .....+|++|++++||.|.++++++|+++++|++.
T Consensus       249 ~~~---------------~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~  286 (287)
T 3sc6_A          249 AAR---------------PKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS  286 (287)
T ss_dssp             SCC---------------CSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred             cCC---------------CCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence            000               01345799999988999999999999999999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=4.7e-35  Score=273.16  Aligned_cols=292  Identities=19%  Similarity=0.214  Sum_probs=206.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHh--cCCCeeEEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIFY  102 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h~a~  102 (396)
                      |+|||||||||||++|+++|++     +|++|++++|...... ....+++++.+|++|++++.++++  ++|.|+|+|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLA-----RGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHT-----TTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHH-----CCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            4799999999999999999999     8999999998543211 011467899999999999999888  7889999977


Q ss_pred             eccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccc-eeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047          103 VTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGT-KHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  179 (396)
Q Consensus       103 ~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~-~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y  179 (396)
                      .....  ..++...+++|+.|+.+++++|++.+  +++++++||. .+|       |.. ....+.+|++|..|..  .|
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~--~~~iv~~SS~~~~~-------g~~-~~~~~~~E~~~~~~~~--~Y  143 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG--VEKLVFASTGGAIY-------GEV-PEGERAEETWPPRPKS--PY  143 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEHHHHH-------CCC-CTTCCBCTTSCCCCCS--HH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCEEEEeCCChhhc-------CCC-CCCCCcCCCCCCCCCC--hH
Confidence            43221  12466788999999999999998764  6788888764 444       421 1145778887765543  36


Q ss_pred             hH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc--chhHHHHHHHHHHhhhcCCCceec-----CCccccceee
Q 016047          180 TL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--MNLVGALCVYAAVCKHEGIPLRFP-----GTKAAWECYS  247 (396)
Q Consensus       180 ~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~-----g~~~~~~~~~  247 (396)
                      +.     |+++..+. ++.+++++++||++|||+.....  ..+...+..  .+.  .+.++...     |++.+.+.++
T Consensus       144 ~~sK~~~e~~~~~~~-~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~g~~~~~~i  218 (311)
T 2p5y_A          144 AASKAAFEHYLSVYG-QSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAE--RVL--KGLPVTLYARKTPGDEGCVRDYV  218 (311)
T ss_dssp             HHHHHHHHHHHHHHH-HHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHH--HHH--HTCCEEEECSSSTTSCCCEECEE
T ss_pred             HHHHHHHHHHHHHHH-HHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHH--HHH--cCCCcEEEecccCCCCCeEEeeE
Confidence            64     55555543 45689999999999999542211  111121211  111  24454444     7766666777


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHH
Q 016047          248 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  327 (396)
Q Consensus       248 ~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (396)
                      ++.|+   |++++.++..+   +++||++++..+|++|+++.+++.+|.+.....          .+.            
T Consensus       219 ~v~Dv---a~a~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~------------  270 (311)
T 2p5y_A          219 YVGDV---AEAHALALFSL---EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQP----------APP------------  270 (311)
T ss_dssp             EHHHH---HHHHHHHHHHC---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEE----------ECC------------
T ss_pred             EHHHH---HHHHHHHHhCC---CCEEEeCCCCCccHHHHHHHHHHHhCCCCCcee----------CCC------------
Confidence            76665   77777766543   789999999999999999999999997643210          000            


Q ss_pred             HHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhC
Q 016047          328 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       328 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                .+...               ....+|++|++++||+|+++++++|+++++|++++
T Consensus       271 ----------~~~~~---------------~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~  310 (311)
T 2p5y_A          271 ----------RPGDL---------------ERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRGA  310 (311)
T ss_dssp             ----------CTTCC---------------SBCCBCCHHHHTTTCCCSSCHHHHHHHHHHHHHTC
T ss_pred             ----------Cccch---------------hhccCCHHHHHHCCCCCCCCHHHHHHHHHHHHHhh
Confidence                      00000               13457999998899999999999999999999864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.5e-34  Score=275.58  Aligned_cols=294  Identities=13%  Similarity=0.124  Sum_probs=207.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC------------CC--CCCCCCeeEEEecCCChHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK------------PN--WNADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~------------~~--~~~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      +|+|||||||||||++|+++|++..   .|++|++++|.+.            ..  .....+++++.+|++|++++.++
T Consensus        10 ~~~vlVTGatG~IG~~l~~~L~~~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A           10 NQTILITGGAGFVGSNLAFHFQENH---PKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHC---TTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhC---CCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            4799999999999999999998721   3899999999654            11  01224678999999999999998


Q ss_pred             -HhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           91 -LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        91 -~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                       ..++|.|+|+|+.......++...+++|+.|+.+++++|++.+  ++ |+++||..       +||..   ..+++|++
T Consensus        87 ~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~~-~V~~SS~~-------vyg~~---~~~~~E~~  153 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK--AK-VIYASSAG-------VYGNT---KAPNVVGK  153 (362)
T ss_dssp             TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT--CE-EEEEEEGG-------GGCSC---CSSBCTTS
T ss_pred             hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC--Cc-EEEeCcHH-------HhCCC---CCCCCCCC
Confidence             7889999999885544445778899999999999999998865  44 77777644       45532   33888988


Q ss_pred             CCCCCCCcchhHHHHHHHHhhcCC--CeeEEEEcCCceeecCCCCcc---hhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047          170 PRLDAPNFYYTLEDILFEEVEKKE--ELSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIPLRFPGTKAAWE  244 (396)
Q Consensus       170 p~~~~~~~~y~~e~~l~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  244 (396)
                      +..|...  |+..|...+.+.+..  .++++++||++|||++.....   .+...+..  .+  ..+.++...+++.+.+
T Consensus       154 ~~~p~~~--Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~g~~~~  227 (362)
T 3sxp_A          154 NESPENV--YGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLAL--GA--MAFKEVKLFEFGEQLR  227 (362)
T ss_dssp             CCCCSSH--HHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHH--HH--HTTSEEECSGGGCCEE
T ss_pred             CCCCCCh--hHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHH--HH--HhCCCeEEECCCCeEE
Confidence            8766443  775444433321111  189999999999994332111   22222211  11  1255556667777767


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047          245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  324 (396)
Q Consensus       245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (396)
                      .++++.|+   |++++.++..+ ..| +||++++..+|+.|+++.+++.+| +....            ..+..      
T Consensus       228 ~~i~v~Dv---a~ai~~~~~~~-~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~------------~~~~~------  283 (362)
T 3sxp_A          228 DFVYIEDV---IQANVKAMKAQ-KSG-VYNVGYSQARSYNEIVSILKEHLG-DFKVT------------YIKNP------  283 (362)
T ss_dssp             ECEEHHHH---HHHHHHHTTCS-SCE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEE------------CCC--------
T ss_pred             ccEEHHHH---HHHHHHHHhcC-CCC-EEEeCCCCCccHHHHHHHHHHHcC-CCceE------------ECCCC------
Confidence            77776665   88888777654 345 999999999999999999999999 43221            01100      


Q ss_pred             hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                +     ..             ......+|++|+++ |||+|.++++++|+++++|+++.
T Consensus       284 ----------~-----~~-------------~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  324 (362)
T 3sxp_A          284 ----------Y-----AF-------------FQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI  324 (362)
T ss_dssp             ---------------------------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred             ----------C-----cC-------------cccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence                      0     00             00134589999965 79999999999999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.6e-34  Score=273.67  Aligned_cols=299  Identities=14%  Similarity=0.089  Sum_probs=209.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC------CC------C--CCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP------NW------N--ADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------~~------~--~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      |+|+|||||||||||++|+++|++     .|++|++++|....      ..      .  ...+++++.+|++|++++.+
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~   75 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLE-----AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR   75 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHH-----TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHH
Confidence            678999999999999999999998     79999999986432      10      0  02468899999999999999


Q ss_pred             HHh--cCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           90 KLS--QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        90 ~~~--~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +++  ++|.|+|+|+.....  ..++...+++|+.++.+++++|++.+  +++++++||..+|       |..  ...++
T Consensus        76 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~-------g~~--~~~~~  144 (348)
T 1ek6_A           76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVY-------GNP--QYLPL  144 (348)
T ss_dssp             HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGG-------CSC--SSSSB
T ss_pred             HHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHh-------CCC--CCCCc
Confidence            998  788899997743211  12566788999999999999998764  6788888765544       421  24678


Q ss_pred             cCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC---------cchhHHHHHHHHHHhhhcC
Q 016047          166 TEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~~~  231 (396)
                      +|+++..|. ...|+.     |+++..+.....+++++++||+++||+.+..         ..++...+   .....+.+
T Consensus       145 ~E~~~~~p~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~---~~~~~~~~  220 (348)
T 1ek6_A          145 DEAHPTGGC-TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYV---SQVAIGRR  220 (348)
T ss_dssp             CTTSCCCCC-SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH---HHHHHTSS
T ss_pred             CCCCCCCCC-CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHH---HHHHHhcC
Confidence            888876552 223664     5555554422234999999999999964311         11222222   11122234


Q ss_pred             CCceecC------CccccceeeecccHHHHHHHHHHHhcCCC-CCC-ceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCc
Q 016047          232 IPLRFPG------TKAAWECYSIASDADLIAEHQIWAAVDPY-AKN-EAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSE  303 (396)
Q Consensus       232 ~~~~~~g------~~~~~~~~~~~~da~~la~~~i~~~~~~~-~~g-~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~  303 (396)
                      .++.+.|      ++.+.+.++|+.|+   |++++.++..+. ..+ ++||++++..+|++|+++.+++.+|.+.+... 
T Consensus       221 ~~~~~~g~~~~~~~g~~~~~~i~v~Dv---a~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-  296 (348)
T 1ek6_A          221 EALNVFGNDYDTEDGTGVRDYIHVVDL---AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV-  296 (348)
T ss_dssp             SCEEEECSCSSSSSSSCEECEEEHHHH---HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEE-
T ss_pred             CCeEEeCCcccCCCCceEEeeEEHHHH---HHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceee-
Confidence            4555544      45555667766665   777776665432 344 89999999999999999999999997643210 


Q ss_pred             hhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHH
Q 016047          304 EEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSF  382 (396)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~  382 (396)
                                 .+                    ......               ....+|++|+++ |||+|+++++++|
T Consensus       297 -----------~~--------------------~~~~~~---------------~~~~~d~~k~~~~lG~~p~~~l~~~l  330 (348)
T 1ek6_A          297 -----------VA--------------------RREGDV---------------AACYANPSLAQEELGWTAALGLDRMC  330 (348)
T ss_dssp             -----------EC--------------------CCTTCC---------------SEECBCCHHHHHTTCCCCCCCHHHHH
T ss_pred             -----------CC--------------------CCCccc---------------hhhccCHHHHHHhcCCCCCCCHHHHH
Confidence                       00                    000000               134579999976 6999999999999


Q ss_pred             HHHHHHHhhC
Q 016047          383 ITWIDKVKGF  392 (396)
Q Consensus       383 ~~~~~~~~~~  392 (396)
                      +++++|+++.
T Consensus       331 ~~~~~w~~~~  340 (348)
T 1ek6_A          331 EDLWRWQKQN  340 (348)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhc
Confidence            9999999875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.5e-34  Score=271.93  Aligned_cols=296  Identities=16%  Similarity=0.114  Sum_probs=209.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHh--cCCCeeEEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIFY  102 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h~a~  102 (396)
                      |+|||||||||||++|+++|++     .|++|++++|....... ...+++++.+|+.|++++.++++  ++|.|+|+|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~   76 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVD-----EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAA   76 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHh-----CCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCc
Confidence            6899999999999999999998     79999999997543210 11378899999999999999998  8899999987


Q ss_pred             eccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh
Q 016047          103 VTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  180 (396)
Q Consensus       103 ~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~  180 (396)
                      .....  ..++...+++|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|++|..|...  |+
T Consensus        77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~Ss~~~~-------~~~--~~~~~~E~~~~~~~~~--Y~  143 (330)
T 2c20_A           77 DSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK--VDKFIFSSTAATY-------GEV--DVDLITEETMTNPTNT--YG  143 (330)
T ss_dssp             CCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGG-------CSC--SSSSBCTTSCCCCSSH--HH
T ss_pred             ccCccccccCHHHHHHHHhHHHHHHHHHHHHcC--CCEEEEeCCceee-------CCC--CCCCCCcCCCCCCCCh--HH
Confidence            43221  12566788999999999999998864  7788888765544       421  2467888887655333  65


Q ss_pred             H-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC--------cchhHHHHHHHHHHhhhcCCCceecC------Ccc
Q 016047          181 L-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS--------LMNLVGALCVYAAVCKHEGIPLRFPG------TKA  241 (396)
Q Consensus       181 ~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~g------~~~  241 (396)
                      .     |+++..+. ++.+++++++||+.|||+.+..        ..++...+   .....+.+.++.+.|      ++.
T Consensus       144 ~sK~~~e~~~~~~~-~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~g~  219 (330)
T 2c20_A          144 ETKLAIEKMLHWYS-QASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLV---LQVALGQREKIMMFGDDYNTPDGT  219 (330)
T ss_dssp             HHHHHHHHHHHHHH-HTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHH---HHHHTTSSSCEEEECSCCSSSSSS
T ss_pred             HHHHHHHHHHHHHH-HHhCCcEEEEecCcccCCCCcCccccccccccchHHHH---HHHHhhcCCCeEEeCCccccCCCc
Confidence            4     56666554 5569999999999999964321        11222222   111122233445554      455


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHH
Q 016047          242 AWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  319 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  319 (396)
                      +.+.++++.|+   |++++.++..+.  ..+++||++++..+|++|+++.+++.+|.+.+...            .+   
T Consensus       220 ~~~~~v~v~Dv---a~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~------------~~---  281 (330)
T 2c20_A          220 CIRDYIHVEDL---VAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEV------------AP---  281 (330)
T ss_dssp             CEECEEEHHHH---HHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEE------------EC---
T ss_pred             eeEeeEeHHHH---HHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceee------------CC---
Confidence            55667776665   677666654322  23689999999999999999999999987643210            00   


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccc-cCHHHHHHHHHHHhhCC
Q 016047          320 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVKGFK  393 (396)
Q Consensus       320 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~~~~~~~~~~~~~~~  393 (396)
                                       ....   .            .....+|++|+++ |||+|.+ +++++|+++++|+++..
T Consensus       282 -----------------~~~~---~------------~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~  325 (330)
T 2c20_A          282 -----------------RRAG---D------------PARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQP  325 (330)
T ss_dssp             -----------------CCSS---C------------CSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHCS
T ss_pred             -----------------CCCC---c------------ccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHhh
Confidence                             0000   0            0134579999986 7999999 99999999999998753

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=1.6e-34  Score=274.20  Aligned_cols=297  Identities=16%  Similarity=0.145  Sum_probs=212.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--CC----------CCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NA----------DHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~----------~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      +|+|||||||||||++|+++|++     .|++|++++|.+....  ..          ..+++++.+|+.|++++.++++
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLK-----LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc
Confidence            47999999999999999999999     7999999999754210  00          1578999999999999999999


Q ss_pred             cCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           93 QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      ++|.|+|+|+.....  ..++...+++|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|+++
T Consensus       102 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~-------~~~--~~~~~~E~~~  170 (352)
T 1sb8_A          102 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK--VQSFTYAASSSTY-------GDH--PGLPKVEDTI  170 (352)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGG-------TTC--CCSSBCTTCC
T ss_pred             CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHhc-------CCC--CCCCCCCCCC
Confidence            999999998743211  12566788999999999999999864  7788888866554       321  1457788887


Q ss_pred             CCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc---chhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          171 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       171 ~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                      ..|..  .|+.     |+++..+. ++.+++++++||+.|||+.....   ..+...+..  .+.  .+.++.++|++.+
T Consensus       171 ~~~~~--~Y~~sK~~~e~~~~~~~-~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~g~g~~  243 (352)
T 1sb8_A          171 GKPLS--PYAVTKYVNELYADVFS-RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTS--SMI--QGDDVYINGDGET  243 (352)
T ss_dssp             CCCCS--HHHHHHHHHHHHHHHHH-HHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHH--HHH--HTCCCEEESSSCC
T ss_pred             CCCCC--hhHHHHHHHHHHHHHHH-HHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHH--HHH--CCCCcEEeCCCCc
Confidence            65543  3664     55555543 44589999999999999543211   122222211  111  2556566777777


Q ss_pred             cceeeecccHHHHHHHHHHHhcC-CCCCCceeeecCCCeeeHHHHHHHHHHHh---CCCCCCCCchhhcCCCCcccCCHH
Q 016047          243 WECYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGDVFKWKHLWKVLAEQF---GIEDYGLSEEEEEGGGGTQRVKLA  318 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~-~~~~g~~~ni~~~~~~s~~el~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~  318 (396)
                      .+.++++.|+   |++++.++.. +...+++||++++..+|++|+++.+++.+   |.+....+.               
T Consensus       244 ~~~~i~v~Dv---a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~---------------  305 (352)
T 1sb8_A          244 SRDFCYIENT---VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV---------------  305 (352)
T ss_dssp             EECCEEHHHH---HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCE---------------
T ss_pred             eEeeEEHHHH---HHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCce---------------
Confidence            6777776665   7777776654 24568999999999999999999999999   876442110               


Q ss_pred             HHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          319 EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                       +              ....+...               .+..+|++|+++ +||+|+++++|+|+++++|+++.
T Consensus       306 -~--------------~~~~~~~~---------------~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          306 -Y--------------RDFREGDV---------------RHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             -E--------------ECCCTTCC---------------SBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             -e--------------cCCCccch---------------hhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence             0              00000000               134579999986 79999999999999999999753

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=6.3e-34  Score=267.83  Aligned_cols=291  Identities=14%  Similarity=0.102  Sum_probs=206.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHHHh--cCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLS--QLTD   96 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~   96 (396)
                      +..+|+|||||||||||++|+++|++     .|++|++++|++....   ....+++++.+|++|++++.++++  ++|.
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLP-----QGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGG-----GTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            33458999999999999999999999     8999999999654321   111578899999999999999998  8999


Q ss_pred             eeEEEEeccCC-CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCC
Q 016047           97 VTHIFYVTWTN-RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  175 (396)
Q Consensus        97 V~h~a~~~~~~-~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~  175 (396)
                      |+|+|+..... ..++.  +++|+.++.+++++|.+.+  +++++++||..+|       |.......|++|++  .+  
T Consensus        92 vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~--~~~iV~~SS~~~~-------~~~~~~~~~~~E~~--~~--  156 (330)
T 2pzm_A           92 VVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKAG--VKRLLNFQTALCY-------GRPATVPIPIDSPT--AP--  156 (330)
T ss_dssp             EEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHHT--CSEEEEEEEGGGG-------CSCSSSSBCTTCCC--CC--
T ss_pred             EEECCccCCCccccChh--HHHHHHHHHHHHHHHHHcC--CCEEEEecCHHHh-------CCCccCCCCcCCCC--CC--
Confidence            99998754332 12233  8999999999999999764  6788888765544       32100012677776  22  


Q ss_pred             CcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHH
Q 016047          176 NFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLI  255 (396)
Q Consensus       176 ~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~l  255 (396)
                      ...|+..|...+.+.+..+++++++||+++||+  +...++...+..  .+..  +.  ...+++. ...++++.|+   
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp--~~~~~~~~~~~~--~~~~--~~--~~~~~~~-~~~~i~~~Dv---  224 (330)
T 2pzm_A          157 FTSYGISKTAGEAFLMMSDVPVVSLRLANVTGP--RLAIGPIPTFYK--RLKA--GQ--KCFCSDT-VRDFLDMSDF---  224 (330)
T ss_dssp             CSHHHHHHHHHHHHHHTCSSCEEEEEECEEECT--TCCSSHHHHHHH--HHHT--TC--CCCEESC-EECEEEHHHH---
T ss_pred             CChHHHHHHHHHHHHHHcCCCEEEEeeeeeECc--CCCCCHHHHHHH--HHHc--CC--EEeCCCC-EecceeHHHH---
Confidence            334887777666554555899999999999994  432222222211  1112  22  2233333 4455655554   


Q ss_pred             HH-HHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHH
Q 016047          256 AE-HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRE  334 (396)
Q Consensus       256 a~-~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (396)
                      |+ +++.++..+.  +++||++++..+|++|+++.+++.+|.+ ....            .+.                 
T Consensus       225 a~~a~~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~------------~~~-----------------  272 (330)
T 2pzm_A          225 LAIADLSLQEGRP--TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEP------------VPV-----------------  272 (330)
T ss_dssp             HHHHHHHTSTTCC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSC------------CCE-----------------
T ss_pred             HHHHHHHHhhcCC--CCEEEeCCCCCCCHHHHHHHHHHHhCCC-Ccee------------CCC-----------------
Confidence            88 7777766543  8999999999999999999999999987 2210            000                 


Q ss_pred             hCCCcccccccccceeehhhhcCcccccchhhH-----hhcCCCccccCHHHHHHHHHHHhhCCCC
Q 016047          335 NQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKS-----KEHGFSGFRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       335 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~lG~~p~~~~~~~~~~~~~~~~~~~~~  395 (396)
                           ..  .            .....+|++|+     +++||+|.++++++|+++++|+++.|++
T Consensus       273 -----~~--~------------~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~~~~~~  319 (330)
T 2pzm_A          273 -----VA--P------------GADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYGVT  319 (330)
T ss_dssp             -----EC--C------------CTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred             -----Cc--c------------hhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHHhhCcc
Confidence                 00  0            00334688888     8899999999999999999999998886

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=5.7e-35  Score=269.33  Aligned_cols=272  Identities=19%  Similarity=0.202  Sum_probs=203.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-CCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-LTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-~~~V~h~a~~~  104 (396)
                      |+||||| +||||++|+++|++     .|++|++++|++...   ..+++++.+|+.|++++.+++++ +|.|+|+|+..
T Consensus         4 ~~ilVtG-aG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~   74 (286)
T 3gpi_A            4 SKILIAG-CGDLGLELARRLTA-----QGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAAS   74 (286)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHH
T ss_pred             CcEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCC
Confidence            6899999 59999999999999     899999999986552   26889999999999999888888 99999997643


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  184 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~  184 (396)
                      .   .++...+++|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|++|..|..  .|+..|.
T Consensus        75 ~---~~~~~~~~~n~~~~~~ll~a~~~~~--~~~~v~~SS~~vy-------g~~--~~~~~~E~~~~~p~~--~Y~~sK~  138 (286)
T 3gpi_A           75 E---YSDEHYRLSYVEGLRNTLSALEGAP--LQHVFFVSSTGVY-------GQE--VEEWLDEDTPPIAKD--FSGKRML  138 (286)
T ss_dssp             H---HC-----CCSHHHHHHHHHHTTTSC--CCEEEEEEEGGGC-------CCC--CSSEECTTSCCCCCS--HHHHHHH
T ss_pred             C---CCHHHHHHHHHHHHHHHHHHHhhCC--CCEEEEEcccEEE-------cCC--CCCCCCCCCCCCCCC--hhhHHHH
Confidence            2   3456678999999999999999754  7889988866544       432  245788888876543  4888777


Q ss_pred             HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 016047          185 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV  264 (396)
Q Consensus       185 l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~  264 (396)
                      ..+.. ... ++++++||+.|||  ++.. .+...+      .   . . ..++.+.+...++++.|+   |++++.++.
T Consensus       139 ~~E~~-~~~-~~~~ilR~~~v~G--~~~~-~~~~~~------~---~-~-~~~~~~~~~~~~i~v~Dv---a~~~~~~~~  199 (286)
T 3gpi_A          139 EAEAL-LAA-YSSTILRFSGIYG--PGRL-RMIRQA------Q---T-P-EQWPARNAWTNRIHRDDG---AAFIAYLIQ  199 (286)
T ss_dssp             HHHHH-GGG-SSEEEEEECEEEB--TTBC-HHHHHT------T---C-G-GGSCSSBCEECEEEHHHH---HHHHHHHHH
T ss_pred             HHHHH-Hhc-CCeEEEecccccC--CCch-hHHHHH------H---h-c-ccCCCcCceeEEEEHHHH---HHHHHHHHh
Confidence            77766 555 9999999999999  4332 111111      1   1 1 224556666667766665   777777766


Q ss_pred             CC--CCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccc
Q 016047          265 DP--YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL  342 (396)
Q Consensus       265 ~~--~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  342 (396)
                      .+  ...+++||++++..+|+.|+++.+++.+|.+......                                   +.. 
T Consensus       200 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------------------------------~~~-  243 (286)
T 3gpi_A          200 QRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGAT-----------------------------------PPV-  243 (286)
T ss_dssp             HHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCC-----------------------------------CCB-
T ss_pred             hhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCC-----------------------------------ccc-
Confidence            53  4668999999999999999999999999987543110                                   000 


Q ss_pred             cccccceeehhhhcCcccccchhhHhhcCCCccc-cCHHHHHHHHHHHhh
Q 016047          343 DEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFR-NSKNSFITWIDKVKG  391 (396)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~-~~~~~~~~~~~~~~~  391 (396)
                                    ..+..+|++|++++||+|++ +++++|+++++|+..
T Consensus       244 --------------~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~  279 (286)
T 3gpi_A          244 --------------QGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMRE  279 (286)
T ss_dssp             --------------CSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC
T ss_pred             --------------CCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhc
Confidence                          01345799999988999999 699999999999864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.1e-34  Score=270.91  Aligned_cols=292  Identities=18%  Similarity=0.145  Sum_probs=206.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a  101 (396)
                      ++|+|||||||||||++|+++|++     .|+      +...    ....++++.+|++|++++.+++++  +|.|+|+|
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~-----~g~------~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A   69 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVAD-----GAG------LPGE----DWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLA   69 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHT-----TTC------CTTC----EEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHh-----cCC------cccc----cccccCceecccCCHHHHHHHHhhcCCCEEEECc
Confidence            458999999999999999999999     777      2111    112445568999999999999988  88999998


Q ss_pred             EeccC---CCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC----CCCCC
Q 016047          102 YVTWT---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM----PRLDA  174 (396)
Q Consensus       102 ~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~----p~~~~  174 (396)
                      +....   ...++...+++|+.|+.+++++|++.+  +++++++||..+       ||..  ...|++|++    +..|.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~v~~SS~~v-------yg~~--~~~~~~E~~~~~~~~~p~  138 (319)
T 4b8w_A           70 AMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG--ARKVVSCLSTCI-------FPDK--TTYPIDETMIHNGPPHNS  138 (319)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGG-------SCSS--CCSSBCGGGGGBSCCCSS
T ss_pred             eecccccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEcchhh-------cCCC--CCCCccccccccCCCCCC
Confidence            75321   123567789999999999999999875  778998876554       4432  256788887    33332


Q ss_pred             CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc---chhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 016047          175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  246 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  246 (396)
                       .+.|+.     |+++..+. ++.+++++++||++|||+.....   ..+...+...+......+.++.++|++.+.+.+
T Consensus       139 -~~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (319)
T 4b8w_A          139 -NFGYSYAKRMIDVQNRAYF-QQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQF  216 (319)
T ss_dssp             -SHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECE
T ss_pred             -cchHHHHHHHHHHHHHHHH-HhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEE
Confidence             223664     55555554 45689999999999999543211   122222211111001236677777888877777


Q ss_pred             eecccHHHHHHHHHHHhcC-CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccch
Q 016047          247 SIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE  325 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~-~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (396)
                      +++.|+   |++++.++.. +...+++||++++..+|+.|+++.+.+.+|.+......            +         
T Consensus       217 i~v~Dv---a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~------------~---------  272 (319)
T 4b8w_A          217 IYSLDL---AQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFD------------T---------  272 (319)
T ss_dssp             EEHHHH---HHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEE------------T---------
T ss_pred             EeHHHH---HHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeC------------C---------
Confidence            777776   7777777765 33457899999999999999999999999976432100            0         


Q ss_pred             HHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCC
Q 016047          326 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK  393 (396)
Q Consensus       326 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~  393 (396)
                                 ..+...               ....+|++|+++ +||.|.++++++|+++++|+++..
T Consensus       273 -----------~~~~~~---------------~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~  315 (319)
T 4b8w_A          273 -----------TKSDGQ---------------FKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNY  315 (319)
T ss_dssp             -----------TSCCCC---------------SCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHSC
T ss_pred             -----------CCCcCc---------------ccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence                       000000               034589999997 799999999999999999998753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=5e-34  Score=273.62  Aligned_cols=299  Identities=12%  Similarity=0.026  Sum_probs=210.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  103 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~  103 (396)
                      .|+|||||||||||++|+++|++     +|++|++++|++..... ...+++++.+|+.|++++.++++++|.|+|+|+.
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~  103 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKH-----EGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD  103 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHH-----CCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence            47999999999999999999998     79999999998654321 1247889999999999999999999999999875


Q ss_pred             ccCC---CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh
Q 016047          104 TWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  180 (396)
Q Consensus       104 ~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~  180 (396)
                      ....   ..++...+++|+.++.+++++|++.+  +++|+++||..+|+....  .  .+...+++|+++....+...|+
T Consensus       104 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~--~~~~V~~SS~~v~~~~~~--~--~~~~~~~~E~~~~~~~~~~~Y~  177 (379)
T 2c5a_A          104 MGGMGFIQSNHSVIMYNNTMISFNMIEAARING--IKRFFYASSACIYPEFKQ--L--ETTNVSLKESDAWPAEPQDAFG  177 (379)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEEEGGGSCGGGS--S--SSSSCEECGGGGSSBCCSSHHH
T ss_pred             cCcccccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeehheeCCCCC--C--CccCCCcCcccCCCCCCCChhH
Confidence            3221   34577889999999999999998764  678888887665543210  0  0112456777621112233466


Q ss_pred             H-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc---hhHHHHHHHHHHhhhcCCC-ceecCCccccceeeeccc
Q 016047          181 L-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM---NLVGALCVYAAVCKHEGIP-LRFPGTKAAWECYSIASD  251 (396)
Q Consensus       181 ~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~i~~~~~~~-~~~~g~~~~~~~~~~~~d  251 (396)
                      .     |+++..+. ++.+++++++||+.|||+......   .....+..  .+.  .+.+ +.++|++.+.+.++++.|
T Consensus       178 ~sK~~~E~~~~~~~-~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~g~g~~~~~~i~v~D  252 (379)
T 2c5a_A          178 LEKLATEELCKHYN-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCR--KAQ--TSTDRFEMWGDGLQTRSFTFIDE  252 (379)
T ss_dssp             HHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHH--HHH--HCSSCEEEESCSCCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHH-HHHCCCEEEEEeCceeCcCCCcccccccHHHHHHH--HHH--hCCCceEEeCCCCeeEEEEEHHH
Confidence            4     55555543 456899999999999995422111   12222211  111  2444 566777776667776666


Q ss_pred             HHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHH
Q 016047          252 ADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEI  331 (396)
Q Consensus       252 a~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (396)
                      +   |++++.++..+  .+++||++++..+|++|+++.+.+.+|.+....            .++.              
T Consensus       253 v---a~ai~~~l~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~------------~~p~--------------  301 (379)
T 2c5a_A          253 C---VEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH------------HIPG--------------  301 (379)
T ss_dssp             H---HHHHHHHHHSS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE------------EECC--------------
T ss_pred             H---HHHHHHHhhcc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCCcee------------eCCC--------------
Confidence            5   77877777654  578999999999999999999999998764321            0100              


Q ss_pred             HHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          332 VRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       332 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                               ...             .....+|++|+++ +||+|.++++++|+++++|+++.
T Consensus       302 ---------~~~-------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  341 (379)
T 2c5a_A          302 ---------PEG-------------VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ  341 (379)
T ss_dssp             ---------CCC-------------CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             ---------CCC-------------cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence                     000             0023479999986 69999999999999999999753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=4.7e-34  Score=273.62  Aligned_cols=295  Identities=15%  Similarity=0.088  Sum_probs=205.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      +|+|||||||||||++|+++|++     .| ++|++++|.+...   .....+++++.+|+.|++++.++++++|.|+|+
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~-----~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~  106 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLE-----LGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHL  106 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEEC
T ss_pred             CCEEEEECCccHHHHHHHHHHHH-----cCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEEC
Confidence            36899999999999999999999     79 9999999976432   111357899999999999999999999999999


Q ss_pred             EEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc--CCC---CC-C
Q 016047          101 FYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT--EDM---PR-L  172 (396)
Q Consensus       101 a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~--E~~---p~-~  172 (396)
                      |+.....  ..++...+++|+.++.+++++|++.. .+++++++||..+|+..         ...+++  |+.   |. .
T Consensus       107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~V~~SS~~vyg~~---------~~~~~~~~E~~~~~~~~~  176 (377)
T 2q1s_A          107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFK-RLKKVVYSAAGCSIAEK---------TFDDAKATEETDIVSLHN  176 (377)
T ss_dssp             CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCS-SCCEEEEEEEC-----------------------CCCCCCCSSC
T ss_pred             CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHcCCC---------CCCCcCcccccccccccC
Confidence            8753221  12567788999999999999998751 37789988876555431         134566  776   44 3


Q ss_pred             CCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCC--------Cc----chhHHHHHHHHHHhhhcCCCce
Q 016047          173 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPY--------SL----MNLVGALCVYAAVCKHEGIPLR  235 (396)
Q Consensus       173 ~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~--------~~----~~~~~~~~~~~~i~~~~~~~~~  235 (396)
                      |.  ..|+.     |+++..+. ++.+++++++||+.|||+...        ..    ..+...+..  .+.  .+.++.
T Consensus       177 ~~--~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~--~g~~~~  249 (377)
T 2q1s_A          177 ND--SPYSMSKIFGEFYSVYYH-KQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIY--KAL--KGMPLP  249 (377)
T ss_dssp             CC--SHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHH--HHH--TTCCCC
T ss_pred             CC--CchHHHHHHHHHHHHHHH-HHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHH--HHH--cCCCeE
Confidence            33  33664     55555544 445899999999999995430        11    122222211  111  245556


Q ss_pred             ecCCccccceeeecccHHHHHHH-HHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 016047          236 FPGTKAAWECYSIASDADLIAEH-QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR  314 (396)
Q Consensus       236 ~~g~~~~~~~~~~~~da~~la~~-~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~  314 (396)
                      ++|++.+.+.++++.|+   |++ ++.++..+. .| +||+++++.+|++|+++.+.+.+|.+.....          .+
T Consensus       250 ~~g~g~~~~~~i~v~Dv---a~a~i~~~~~~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~p  314 (377)
T 2q1s_A          250 LENGGVATRDFIFVEDV---ANGLIACAADGTP-GG-VYNIASGKETSIADLATKINEITGNNTELDR----------LP  314 (377)
T ss_dssp             CSGGGCCEECCEEHHHH---HHHHHHHHHHCCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCC----------CC
T ss_pred             EeCCCCeEEeeEEHHHH---HHHHHHHHHhcCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCcee----------CC
Confidence            67777776777776665   788 777776544 56 9999999999999999999999997653211          11


Q ss_pred             CCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          315 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      .                      .+...   .           ....+|++|+++ +||+|.++++++|+++++|+++.
T Consensus       315 ~----------------------~~~~~---~-----------~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          315 K----------------------RPWDN---S-----------GKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             C----------------------CGGGC---C------------CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred             C----------------------Ccccc---c-----------cccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence            0                      00000   0           024579999975 79999999999999999999864

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=6.1e-34  Score=268.56  Aligned_cols=293  Identities=14%  Similarity=0.141  Sum_probs=208.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCC---C---cEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGG---P---WKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~---g---~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      |+|||||||||||++|+++|++     +   |   ++|++++|.+...       .....+++++.+|++|++++.+++.
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~-----~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLA-----GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR   75 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT
T ss_pred             CeEEEECCccHHHHHHHHHHHh-----hhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc
Confidence            4799999999999999999998     5   7   9999999965211       1112578999999999999999999


Q ss_pred             cCCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           93 QLTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      ++|.|+|+|+.....  ..++...+++|+.++.+++++|.+.+  +++|+++||..+|       |..  ...+++|+.|
T Consensus        76 ~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~vy-------g~~--~~~~~~E~~~  144 (337)
T 1r6d_A           76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVY-------GSI--DSGSWTESSP  144 (337)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGG-------CCC--SSSCBCTTSC
T ss_pred             CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHHh-------CCC--CCCCCCCCCC
Confidence            999999998743211  12456788999999999999999864  6788888765544       421  1356788877


Q ss_pred             CCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 016047          171 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  245 (396)
Q Consensus       171 ~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  245 (396)
                      ..+..  .|+.     |+++..+. ++.+++++++||+.|||+.... .++...+..  .+.  .+.++.+++++.+.+.
T Consensus       145 ~~~~~--~Y~~sK~~~e~~~~~~~-~~~g~~~~ilrp~~v~G~~~~~-~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~  216 (337)
T 1r6d_A          145 LEPNS--PYAASKAGSDLVARAYH-RTYGLDVRITRCCNNYGPYQHP-EKLIPLFVT--NLL--DGGTLPLYGDGANVRE  216 (337)
T ss_dssp             CCCCS--HHHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEECTTCCT-TSHHHHHHH--HHH--TTCCEEEETTSCCEEE
T ss_pred             CCCCC--chHHHHHHHHHHHHHHH-HHHCCCEEEEEeeeeECCCCCC-CChHHHHHH--HHh--cCCCcEEeCCCCeeEe
Confidence            65543  3664     55555543 4568999999999999954221 122222211  111  2455566677777677


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccch
Q 016047          246 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE  325 (396)
Q Consensus       246 ~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (396)
                      ++++.|+   |++++.++..+ ..+++||++++..+|+.|+++.+++.+|.+.+.+..           .          
T Consensus       217 ~i~v~Dv---a~a~~~~~~~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------~----------  271 (337)
T 1r6d_A          217 WVHTDDH---CRGIALVLAGG-RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRK-----------V----------  271 (337)
T ss_dssp             EEEHHHH---HHHHHHHHHHC-CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEE-----------E----------
T ss_pred             eEeHHHH---HHHHHHHHhCC-CCCCEEEeCCCCCccHHHHHHHHHHHhCCCccccee-----------c----------
Confidence            7777665   77777666543 467899999999999999999999999976321100           0          


Q ss_pred             HHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          326 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       326 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                   +.....            ...+.+|++|+++ +||+|.++++++|+++++|+++.
T Consensus       272 -------------~~~~~~------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  314 (337)
T 1r6d_A          272 -------------ADRKGH------------DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN  314 (337)
T ss_dssp             -------------CCCTTC------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             -------------CCCCCC------------cceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence                         000000            0034579999986 79999999999999999999865

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.3e-33  Score=266.18  Aligned_cols=294  Identities=15%  Similarity=0.138  Sum_probs=207.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      |+|||||||||||++|+++|++     +|  ++|++++|.+...       .....+++++.+|++|++++.+++.++|.
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~-----~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   78 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILE-----KHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDG   78 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----HCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHH-----hCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCE
Confidence            6899999999999999999998     55  8999999864211       11134788999999999999999999999


Q ss_pred             eeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           97 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        97 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      |+|+|+.....  ..++...+++|+.|+.+++++|.+.+ ...+++++||..+|       |..  ...+++|+++..+.
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vy-------g~~--~~~~~~E~~~~~~~  148 (336)
T 2hun_A           79 VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRREN-PEVRFVHVSTDEVY-------GDI--LKGSFTENDRLMPS  148 (336)
T ss_dssp             EEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEEEEGGGG-------CCC--SSSCBCTTBCCCCC
T ss_pred             EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEeccHHHH-------CCC--CCCCcCCCCCCCCC
Confidence            99998753211  12456788999999999999999873 23688888765544       431  14577888776554


Q ss_pred             CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeec
Q 016047          175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIA  249 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~  249 (396)
                      ..  |+.     |+++..+. .+.+++++++||+.|||+... ...+...+..  .+.  .+.++.+.+++.+...++++
T Consensus       149 ~~--Y~~sK~~~e~~~~~~~-~~~~~~~~ilrp~~v~g~~~~-~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~i~v  220 (336)
T 2hun_A          149 SP--YSATKAASDMLVLGWT-RTYNLNASITRCTNNYGPYQF-PEKLIPKTII--RAS--LGLKIPIYGTGKNVRDWLYV  220 (336)
T ss_dssp             SH--HHHHHHHHHHHHHHHH-HHTTCEEEEEEECEEESTTCC-TTSHHHHHHH--HHH--TTCCEEEETC---CEEEEEH
T ss_pred             Cc--cHHHHHHHHHHHHHHH-HHhCCCEEEEeeeeeeCcCCC-cCchHHHHHH--HHH--cCCCceEeCCCCceeeeEEH
Confidence            33  664     55555544 456899999999999994321 1122222211  111  24556666777766777777


Q ss_pred             ccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHH
Q 016047          250 SDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWE  329 (396)
Q Consensus       250 ~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (396)
                      .|+   |++++.++.. ...+++||++++..+|+.|+++.+++.+|.+.+....           .              
T Consensus       221 ~Dv---a~~~~~~~~~-~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------~--------------  271 (336)
T 2hun_A          221 EDH---VRAIELVLLK-GESREIYNISAGEEKTNLEVVKIILRLMGKGEELIEL-----------V--------------  271 (336)
T ss_dssp             HHH---HHHHHHHHHH-CCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEE-----------E--------------
T ss_pred             HHH---HHHHHHHHhC-CCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccc-----------c--------------
Confidence            665   7777776654 3467899999999999999999999999976432100           0              


Q ss_pred             HHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          330 EIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       330 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                            .-.+..               ...+.+|++|+++ +||+|.++++++|+++++|+++.
T Consensus       272 ------~~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  314 (336)
T 2hun_A          272 ------EDRPGH---------------DLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN  314 (336)
T ss_dssp             ------CCCTTC---------------CCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred             ------CCCCCc---------------hhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence                  000000               0134579999987 79999999999999999999865

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.2e-34  Score=268.62  Aligned_cols=286  Identities=14%  Similarity=0.092  Sum_probs=203.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeEEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIFY  102 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h~a~  102 (396)
                      +|+|||||||||||++|+++|++     +|++|++++|+.             .+|+.|++++.++++  ++|.|+|+|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~~v~~~~r~~-------------~~D~~d~~~~~~~~~~~~~d~vih~a~   64 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGDVELVLRTRD-------------ELNLLDSRAVHDFFASERIDQVYLAAA   64 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTT-----CTTEEEECCCTT-------------TCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHh-----CCCeEEEEecCc-------------cCCccCHHHHHHHHHhcCCCEEEEcCe
Confidence            47899999999999999999999     899999988752             379999999999998  8999999987


Q ss_pred             eccC---CCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC--CCC-C
Q 016047          103 VTWT---NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL--DAP-N  176 (396)
Q Consensus       103 ~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~--~~~-~  176 (396)
                      ....   ...++.+.+++|+.++.+++++|++.+  +++++++||..+|       |..  ...+++|+++..  +.+ .
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~vy-------g~~--~~~~~~E~~~~~~~~~p~~  133 (321)
T 1e6u_A           65 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQND--VNKLLFLGSSCIY-------PKL--AKQPMAESELLQGTLEPTN  133 (321)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGS-------CTT--CCSSBCGGGTTSSCCCGGG
T ss_pred             ecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEccHHHc-------CCC--CCCCcCccccccCCCCCCC
Confidence            5321   112567788999999999999999864  6789988866555       421  245677876321  112 1


Q ss_pred             cchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc---chhHHHHHHHHHHhhh--cC-CCceecCCccccce
Q 016047          177 FYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKH--EG-IPLRFPGTKAAWEC  245 (396)
Q Consensus       177 ~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~--~~-~~~~~~g~~~~~~~  245 (396)
                      ..|+.     |+++.++. ++.+++++++||+.|||+.....   .++...+...  +..+  .+ .++.+++++.+.+.
T Consensus       134 ~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~  210 (321)
T 1e6u_A          134 EPYAIAKIAGIKLCESYN-RQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRR--FHEATAQKAPDVVVWGSGTPMRE  210 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHH--HHHHHHHTCSEEEEESCSCCEEC
T ss_pred             CccHHHHHHHHHHHHHHH-HHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHH--HHHhhhcCCCceEEcCCCCEEEE
Confidence            24664     55555543 44589999999999999543211   1222222111  1111  23 45566777777777


Q ss_pred             eeecccHHHHHHHHHHHhcCCCC--------CCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCH
Q 016047          246 YSIASDADLIAEHQIWAAVDPYA--------KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL  317 (396)
Q Consensus       246 ~~~~~da~~la~~~i~~~~~~~~--------~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  317 (396)
                      ++++.|+   |++++.++.++..        .+++||++++..+|++|+++.+.+.+|.+.....            .+ 
T Consensus       211 ~i~v~Dv---a~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~------------~~-  274 (321)
T 1e6u_A          211 FLHVDDM---AAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF------------DA-  274 (321)
T ss_dssp             EEEHHHH---HHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEE------------ET-
T ss_pred             eEEHHHH---HHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEe------------CC-
Confidence            7777665   7777777765443        2689999999999999999999999997643210            00 


Q ss_pred             HHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhC
Q 016047          318 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                         ..+..               .....+|++|++++||+|+++++++|+++++|+++.
T Consensus       275 -------------------~~~~~---------------~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~  315 (321)
T 1e6u_A          275 -------------------SKPDG---------------TPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN  315 (321)
T ss_dssp             -------------------TSCCC---------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             -------------------CCCCC---------------cccccCCHHHHHhcCCccCCcHHHHHHHHHHHHHHH
Confidence                               00000               013458999998899999999999999999999865

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=2.5e-33  Score=264.01  Aligned_cols=295  Identities=14%  Similarity=0.110  Sum_probs=203.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHhc--CCCeeE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTH   99 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h   99 (396)
                      +|+|||||||||||++|+++|++     +|++|++++|++...   .....+++++.+|++|++++.+++++  +|.|+|
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih   95 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLE-----RGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVH   95 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHH-----CCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence            37999999999999999999998     799999999975432   11114788999999999999999988  999999


Q ss_pred             EEEeccCCC-ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcc
Q 016047          100 IFYVTWTNR-STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  178 (396)
Q Consensus       100 ~a~~~~~~~-~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~  178 (396)
                      +|+...... .++.  +++|+.++.+++++|.+.+  +++++++||..+|+..  .. ..  .. +++|++  .|. ...
T Consensus        96 ~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~--~~~iV~~SS~~~~g~~--~~-~~--~~-~~~E~~--~p~-~~~  162 (333)
T 2q1w_A           96 TAASYKDPDDWYND--TLTNCVGGSNVVQAAKKNN--VGRFVYFQTALCYGVK--PI-QQ--PV-RLDHPR--NPA-NSS  162 (333)
T ss_dssp             CCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGCSC--CC-SS--SB-CTTSCC--CCT-TCH
T ss_pred             CceecCCCccCChH--HHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHhCCC--cc-cC--CC-CcCCCC--CCC-CCc
Confidence            987543321 2233  8999999999999999864  6788888865544310  00 21  12 677776  232 034


Q ss_pred             hhHHHHHHHHhhcC-CCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 016047          179 YTLEDILFEEVEKK-EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  257 (396)
Q Consensus       179 y~~e~~l~~~~~~~-~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  257 (396)
                      |+..|...+.+.+. .. +++++||+++||+  +....+...+..  .+..  +.+  ..+ +.+...++++.|   +|+
T Consensus       163 Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp--~~~~~~~~~~~~--~~~~--~~~--~~~-~~~~~~~i~v~D---va~  229 (333)
T 2q1w_A          163 YAISKSANEDYLEYSGL-DFVTFRLANVVGP--RNVSGPLPIFFQ--RLSE--GKK--CFV-TKARRDFVFVKD---LAR  229 (333)
T ss_dssp             HHHHHHHHHHHHHHHTC-CEEEEEESEEEST--TCCSSHHHHHHH--HHHT--TCC--CEE-EECEECEEEHHH---HHH
T ss_pred             hHHHHHHHHHHHHhhhC-CeEEEeeceEECc--CCcCcHHHHHHH--HHHc--CCe--eeC-CCceEeeEEHHH---HHH
Confidence            77666555544233 33 8999999999994  422222222211  1112  222  233 444455555555   488


Q ss_pred             HHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCC
Q 016047          258 HQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQL  337 (396)
Q Consensus       258 ~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  337 (396)
                      +++.++..+.  +++||++++..+|++|+++.+++.+|.+ ....          .+...                    
T Consensus       230 ai~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~----------~~~~~--------------------  276 (333)
T 2q1w_A          230 ATVRAVDGVG--HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPE----------PEIRE--------------------  276 (333)
T ss_dssp             HHHHHHTTCC--CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCC----------CEEEE--------------------
T ss_pred             HHHHHHhcCC--CCEEEeCCCCCccHHHHHHHHHHHhCCC-Ccee----------CCCCC--------------------
Confidence            8888776544  8999999999999999999999999987 2211          11100                    


Q ss_pred             CcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047          338 QPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  396 (396)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~  396 (396)
                        .....   +        ..+..+|++|++++||+|.++++++|+++++|+++.|++|
T Consensus       277 --~~~~~---~--------~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~~~~  322 (333)
T 2q1w_A          277 --LGPDD---A--------PSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSG  322 (333)
T ss_dssp             --CCTTS---C--------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred             --ccccc---c--------cccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHHCCCC
Confidence              00000   0        0145689999998899999999999999999999999875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=9.7e-34  Score=268.31  Aligned_cols=301  Identities=11%  Similarity=0.043  Sum_probs=210.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCCCCC----C--CCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPN----W--NADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~----~--~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      |+|||||||||||++|+++|++     .  |++|++++|.+...    .  ....+++++.+|++|++++.++++++|.|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYN-----NHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAI   79 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHH-----HCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             cEEEEeCCccHHHHHHHHHHHH-----hCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEE
Confidence            6899999999999999999998     6  89999999975321    1  01257899999999999999999999999


Q ss_pred             eEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccc---ccccCCCCCCCccCCCCCC
Q 016047           98 THIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFE---AFGKIKPYDPPFTEDMPRL  172 (396)
Q Consensus        98 ~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~---~~g~~~~~~~p~~E~~p~~  172 (396)
                      +|+|+.....  ..++...+++|+.|+.+++++|.+.+  + +++++||..+|+....   ..+...+...+++|++|..
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~--~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (348)
T 1oc2_A           80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN  156 (348)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred             EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC--C-eEEEecccceeCCCcccccccccccccCCCcCCCCCCC
Confidence            9998753211  12456788999999999999999874  4 8888887666643210   0000001125788887765


Q ss_pred             CCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceee
Q 016047          173 DAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYS  247 (396)
Q Consensus       173 ~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~  247 (396)
                      +...  |+.     |+++..+. .+.+++++++||+.|||+.... ..+...+..  .+.  .+.++.+.+++.+...++
T Consensus       157 ~~~~--Y~~sK~~~e~~~~~~~-~~~gi~~~ilrp~~v~G~~~~~-~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~i  228 (348)
T 1oc2_A          157 PSSP--YSSTKAASDLIVKAWV-RSFGVKATISNCSNNYGPYQHI-EKFIPRQIT--NIL--AGIKPKLYGEGKNVRDWI  228 (348)
T ss_dssp             CCSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEESTTCCT-TSHHHHHHH--HHH--HTCCCEEETTSCCEEECE
T ss_pred             CCCc--cHHHHHHHHHHHHHHH-HHhCCCEEEEeeceeeCCCCCc-cchHHHHHH--HHH--cCCCceEecCCCceEeeE
Confidence            5433  654     55555544 4558999999999999953221 122222211  111  244555667766666677


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHH
Q 016047          248 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  327 (396)
Q Consensus       248 ~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (396)
                      ++.|+   |++++.++.. ...|++||++++..+|++|+++.+++.+|.+...+..           .            
T Consensus       229 ~v~Dv---a~~~~~~~~~-~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~-----------~------------  281 (348)
T 1oc2_A          229 HTNDH---STGVWAILTK-GRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH-----------V------------  281 (348)
T ss_dssp             EHHHH---HHHHHHHHHH-CCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEE-----------E------------
T ss_pred             EHHHH---HHHHHHHhhC-CCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcccccc-----------C------------
Confidence            66665   7777776654 3467899999999999999999999999976432110           0            


Q ss_pred             HHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCcccc-CHHHHHHHHHHHhhC
Q 016047          328 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRN-SKNSFITWIDKVKGF  392 (396)
Q Consensus       328 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~-~~~~~~~~~~~~~~~  392 (396)
                              ...+..               ...+.+|++|+++ +||+|+++ ++++|+++++|+++.
T Consensus       282 --------~~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~  325 (348)
T 1oc2_A          282 --------TDRAGH---------------DLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN  325 (348)
T ss_dssp             --------CCCTTC---------------CCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             --------CCCCCc---------------ccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence                    000000               0134579999986 79999998 999999999999865

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=1.5e-34  Score=269.61  Aligned_cols=295  Identities=11%  Similarity=0.059  Sum_probs=205.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h   99 (396)
                      |+|+|||||||||||++|+++|++     +  |++|++++|++.... ...+++++.+|+.|++++.++++  ++|.|+|
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            1 MNPKILIIGACGQIGTELTQKLRK-----LYGTENVIASDIRKLNTD-VVNSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHH-----HHCGGGEEEEESCCCSCH-HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCceEEEECCccHHHHHHHHHHHH-----hCCCCEEEEEcCCCcccc-ccCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            567899999999999999999998     7  899999999765421 11357899999999999999998  7899999


Q ss_pred             EEEeccCC-CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcc
Q 016047          100 IFYVTWTN-RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  178 (396)
Q Consensus       100 ~a~~~~~~-~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~  178 (396)
                      +|+..... ..++...+++|+.++.+++++|++.+  +++++++||..+|       |.. ....+.+|+.|..|..  .
T Consensus        75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~-------~~~-~~~~~~~e~~~~~~~~--~  142 (312)
T 2yy7_A           75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK--IKKIFWPSSIAVF-------GPT-TPKENTPQYTIMEPST--V  142 (312)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS--CSEEECCEEGGGC-------CTT-SCSSSBCSSCBCCCCS--H
T ss_pred             CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHHh-------CCC-CCCCCccccCcCCCCc--h
Confidence            98753221 12567788999999999999999864  6788888765554       321 1134667777655543  3


Q ss_pred             hhH-----HHHHHHHhhcCCCeeEEEEcCCceeecC--CCCc-chhHHHHHHHHHHhhhcCCCceecCCccccceeeecc
Q 016047          179 YTL-----EDILFEEVEKKEELSWSVHRPDTIFGFS--PYSL-MNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIAS  250 (396)
Q Consensus       179 y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~--~~~~-~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~  250 (396)
                      |+.     |+++..+. ++.+++++++||+.+||+.  |+.. .+....+.  ....  ...++..++++.+.++++++.
T Consensus       143 Y~~sK~~~e~~~~~~~-~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~i~v~  217 (312)
T 2yy7_A          143 YGISKQAGERWCEYYH-NIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIF--YKAI--ADKKYECFLSSETKMPMMYMD  217 (312)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHCCEEECEEECEEECSSSCCCSCTTTHHHHHH--HHHH--HTSEEEESSCTTCCEEEEEHH
T ss_pred             hHHHHHHHHHHHHHHH-HhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHH--HHHH--cCCCeEEecCCCceeeeeeHH
Confidence            664     55555543 4558999999999999964  2221 12222211  1111  123345566666667777776


Q ss_pred             cHHHHHHHHHHHhcCCCC---CCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHH
Q 016047          251 DADLIAEHQIWAAVDPYA---KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  327 (396)
Q Consensus       251 da~~la~~~i~~~~~~~~---~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (396)
                      |+   |++++.++..+..   .+++||+++ ..+|++|+++.+.+.+|.....+           .+. ..         
T Consensus       218 Dv---a~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~~i~~-----------~~~-~~---------  272 (312)
T 2yy7_A          218 DA---IDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFTITY-----------EPD-FR---------  272 (312)
T ss_dssp             HH---HHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTTCEEEE-----------CCC-TH---------
T ss_pred             HH---HHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCCCceEe-----------ccC-cc---------
Confidence            65   7777777765443   248999986 88999999999999887321110           000 00         


Q ss_pred             HHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHh
Q 016047          328 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  390 (396)
Q Consensus       328 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~  390 (396)
                       ...           .  ..+          ...+|++|+++ |||+|+++++++|+++++|++
T Consensus       273 -~~~-----------~--~~~----------~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          273 -QKI-----------A--DSW----------PASIDDSQAREDWDWKHTFDLESMTKDMIEHLS  312 (312)
T ss_dssp             -HHH-----------H--TTS----------CSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred             -ccc-----------c--ccc----------cccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence             000           0  000          23579999987 699999999999999999985

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=2.2e-33  Score=265.42  Aligned_cols=311  Identities=17%  Similarity=0.215  Sum_probs=208.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCCC--CCCCCCeeEEEecCCCh-HHHHHHHhcCCCeeEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--WNADHLVEYVQCDVSDP-EETQAKLSQLTDVTHIF  101 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~-~~~~~~~~~~~~V~h~a  101 (396)
                      |+|||||||||||++|+++|++     . |++|++++|++...  .....+++++.+|+.|. +.+.++++++|.|+|+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A   75 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLR-----EDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHH-----STTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CeEEEECCCcHHHHHHHHHHHH-----hCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence            4899999999999999999998     6 89999999976432  11235789999999984 56888899999999998


Q ss_pred             EeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC---C--C
Q 016047          102 YVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL---D--A  174 (396)
Q Consensus       102 ~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~---~--~  174 (396)
                      +.....  ..++...+++|+.++.+++++|++.+   ++++++||..+|       |..  ...+++|+++..   |  .
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~SS~~v~-------g~~--~~~~~~e~~~~~~~~~~~~  143 (345)
T 2bll_A           76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVY-------GMC--SDKYFDEDHSNLIVGPVNK  143 (345)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGG-------BTC--CCSSBCTTTCCCBCCCTTC
T ss_pred             cccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC---CeEEEEecHHHc-------CCC--CCCCcCCcccccccCcccC
Confidence            753321  12556788999999999999998864   688888765544       431  134567776532   1  1


Q ss_pred             CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc-------chhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-------MNLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                      +...|+.     |+++..+. ++.+++++++||+.|||+.....       ......+..  .+.  .+.++.+++++.+
T Consensus       144 ~~~~Y~~sK~~~e~~~~~~~-~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~g~~  218 (345)
T 2bll_A          144 PRWIYSVSKQLLDRVIWAYG-EKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL--NLV--EGSPIKLIDGGKQ  218 (345)
T ss_dssp             GGGHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHH--HHH--HTCCEEEGGGSCC
T ss_pred             cccccHHHHHHHHHHHHHHH-HhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHH--HHH--cCCCcEEECCCCE
Confidence            2224664     55555544 45689999999999999543211       112222211  111  2556666777776


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC-eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHH
Q 016047          243 WECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  319 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~-~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  319 (396)
                      .+.++++.|+   |++++.++..+.  ..+++||+++++ .+|++|+++.+++.+|.+.....          .+.... 
T Consensus       219 ~~~~i~v~Dv---a~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~-  284 (345)
T 2bll_A          219 KRCFTDIRDG---IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH----------FPPFAG-  284 (345)
T ss_dssp             EEECEEHHHH---HHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGG----------SCCCCC-
T ss_pred             EEEEEEHHHH---HHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCccccc----------Cccccc-
Confidence            6677766665   777777776543  468899999986 89999999999999987643210          000000 


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCC
Q 016047          320 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK  393 (396)
Q Consensus       320 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~  393 (396)
                      .... .  ...+   ++.   ...        +    .....+|++|+++ |||+|+++++++|+++++|+++..
T Consensus       285 ~~~~-~--~~~~---~~~---~~~--------~----~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  338 (345)
T 2bll_A          285 FRVV-E--SSSY---YGK---GYQ--------D----VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (345)
T ss_dssp             EEEC---------------------------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             cccc-c--chhh---ccc---ccc--------c----hhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcC
Confidence            0000 0  0000   000   000        0    0134579999986 699999999999999999997654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=2.5e-33  Score=266.47  Aligned_cols=298  Identities=14%  Similarity=0.069  Sum_probs=205.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC------CCCCeeEEEecCCChHHHHHHHhc--CCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLSQ--LTD   96 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~~--~~~   96 (396)
                      +|+|||||||||||++|+++|++     .|++|++++|++.....      ...+++++.+|+.|++++.+++++  +|.
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   83 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQT-----MGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEI   83 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHh-----CCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence            47999999999999999999999     89999999997643210      124789999999999999999987  788


Q ss_pred             eeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           97 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        97 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      |+|+|+.....  ..++...+++|+.|+.+++++|.+.+ .+++++++||..+|       |.. ....+++|+++..+.
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~vy-------g~~-~~~~~~~E~~~~~~~  154 (357)
T 1rkx_A           84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSDKCY-------DNK-EWIWGYRENEAMGGY  154 (357)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCGGGB-------CCC-CSSSCBCTTSCBCCS
T ss_pred             EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEecCHHHh-------CCC-CcCCCCCCCCCCCCC
Confidence            99998742211  12456788999999999999998863 37789988876555       421 112467777765543


Q ss_pred             CCcchhH-----HHHHHHHhhc--------CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047          175 PNFYYTL-----EDILFEEVEK--------KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  241 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~--------~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  241 (396)
                      .  .|+.     |+++..+..+        ..+++++++||+.|||+.......+...+..  .+.  .+.++.++ ++.
T Consensus       155 ~--~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~--~~~--~g~~~~~~-~~~  227 (357)
T 1rkx_A          155 D--PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILR--AFE--QSQPVIIR-NPH  227 (357)
T ss_dssp             S--HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHH--HHH--TTCCEECS-CTT
T ss_pred             C--ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHH--HHh--cCCCEEEC-CCC
Confidence            3  3664     5555544311        1289999999999999532211222222211  111  24454443 345


Q ss_pred             ccceeeecccHHHHHHHHHHHhcC----CCCCCceeeecCC--CeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccC
Q 016047          242 AWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNG--DVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRV  315 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~----~~~~g~~~ni~~~--~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  315 (396)
                      +.+.++++.|+   |++++.++..    +...+++||++++  ..+|++|+++.+++.+|.+.....            .
T Consensus       228 ~~~~~v~v~Dv---a~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~------------~  292 (357)
T 1rkx_A          228 AIRPWQHVLEP---LSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQL------------D  292 (357)
T ss_dssp             CEECCEETHHH---HHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------------
T ss_pred             CeeccEeHHHH---HHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcccc------------C
Confidence            55667777665   6666665542    2345789999974  579999999999999997643200            0


Q ss_pred             CHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          316 KLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      +.               .    .+..               .....+|++|+++ +||+|+++++++|+++++|+++.
T Consensus       293 ~~---------------~----~~~~---------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  336 (357)
T 1rkx_A          293 GN---------------A----HPHE---------------AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW  336 (357)
T ss_dssp             -------------------------C---------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CC---------------C----CCcC---------------cccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence            00               0    0000               0134589999986 79999999999999999999753

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.6e-34  Score=268.91  Aligned_cols=284  Identities=15%  Similarity=0.124  Sum_probs=201.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC---CC------CCCCCeeEEEecCCChHHHHHHHhc
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---NW------NADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---~~------~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      .|+++|||||||||||++|+++|++     .|++|++++|.+..   ..      ....+++++.+|+.          +
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~   69 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVA-----SGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------D   69 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHH-----TTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------T
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHH-----CCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------c
Confidence            3568999999999999999999999     89999999997651   11      01134556666654          7


Q ss_pred             CCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC
Q 016047           94 LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  171 (396)
Q Consensus        94 ~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~  171 (396)
                      +|.|+|+|+.....  ..++...++ |+.++.+++++|++.+  +++++++||..+|       |..  ...+++|++|.
T Consensus        70 ~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~--v~~~v~~SS~~v~-------~~~--~~~~~~E~~~~  137 (321)
T 3vps_A           70 VRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG--VPKVVVGSTCEVY-------GQA--DTLPTPEDSPL  137 (321)
T ss_dssp             EEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT--CCEEEEEEEGGGG-------CSC--SSSSBCTTSCC
T ss_pred             CCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC--CCeEEEecCHHHh-------CCC--CCCCCCCCCCC
Confidence            78899998754321  224455667 9999999999999875  7789988866555       431  25678898887


Q ss_pred             CCCCCcchhH-----HHHHHHHhhcCCCe-eEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccce
Q 016047          172 LDAPNFYYTL-----EDILFEEVEKKEEL-SWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  245 (396)
Q Consensus       172 ~~~~~~~y~~-----e~~l~~~~~~~~~~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  245 (396)
                      .|...  |+.     |+++..+. ++.++ +++++||+.|||+.... ..+...+...  +.  .+.++..+|++.+.+.
T Consensus       138 ~p~~~--Y~~sK~~~E~~~~~~~-~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~  209 (321)
T 3vps_A          138 SPRSP--YAASKVGLEMVAGAHQ-RASVAPEVGIVRFFNVYGPGERP-DALVPRLCAN--LL--TRNELPVEGDGEQRRD  209 (321)
T ss_dssp             CCCSH--HHHHHHHHHHHHHHHH-HSSSSCEEEEEEECEEECTTCCT-TSHHHHHHHH--HH--HHSEEEEETTSCCEEC
T ss_pred             CCCCh--hHHHHHHHHHHHHHHH-HHcCCCceEEEEeccccCcCCCC-CChHHHHHHH--HH--cCCCeEEeCCCCceEc
Confidence            66443  653     66666665 56789 99999999999953322 1222222111  11  2445666777777777


Q ss_pred             eeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccch
Q 016047          246 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKE  325 (396)
Q Consensus       246 ~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (396)
                      ++++.|+   |++++.++..+.. | +||++++..+|+.|+++.++ .+|.+.....            .+         
T Consensus       210 ~v~v~Dv---a~~~~~~~~~~~~-g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~------------~~---------  262 (321)
T 3vps_A          210 FTYITDV---VDKLVALANRPLP-S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVAR------------KQ---------  262 (321)
T ss_dssp             EEEHHHH---HHHHHHGGGSCCC-S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEE------------EC---------
T ss_pred             eEEHHHH---HHHHHHHHhcCCC-C-eEEecCCCcccHHHHHHHHH-HhCCCCcccc------------CC---------
Confidence            7777665   8888887776544 6 99999999999999999999 9987643210            00         


Q ss_pred             HHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCc-cccCHHHHHHHHHHHhhCCC
Q 016047          326 GVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSG-FRNSKNSFITWIDKVKGFKI  394 (396)
Q Consensus       326 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p-~~~~~~~~~~~~~~~~~~~~  394 (396)
                                 ..+..               ..+..+|++|+++ +||+| +++++++|+++++|+++.++
T Consensus       263 -----------~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          263 -----------PRPNE---------------ITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDL  307 (321)
T ss_dssp             -----------CCTTC---------------CSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred             -----------CCCCC---------------cceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence                       00000               0145689999997 79999 99999999999999998765

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-33  Score=268.25  Aligned_cols=328  Identities=16%  Similarity=0.077  Sum_probs=207.9

Q ss_pred             cccccccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CC---------CCCCeeE
Q 016047           10 GAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN---------ADHLVEY   76 (396)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~---------~~~~v~~   76 (396)
                      |+.-|+.    ...|.|+|||||||||||++|+++|++     +|++|++++|++...    ..         ...++++
T Consensus        13 ~~~~~~~----~~~M~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~   83 (375)
T 1t2a_A           13 GRENKYF----QGHMRNVALITGITGQDGSYLAEFLLE-----KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL   83 (375)
T ss_dssp             ---------------CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCTTTGGGC---------CEEE
T ss_pred             cccchhh----HhhcCcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECCccccchhhHHHHhhhhccccCCCceE
Confidence            3334666    455667999999999999999999998     799999999976431    00         1246889


Q ss_pred             EEecCCChHHHHHHHhc--CCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEeccceeeccc
Q 016047           77 VQCDVSDPEETQAKLSQ--LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGP  151 (396)
Q Consensus        77 ~~~Dl~d~~~~~~~~~~--~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss  151 (396)
                      +.+|++|++++.+++++  +|.|+|+|+.....  ..++...+++|+.|+.+++++|.+.+. +..+|+++||..+|   
T Consensus        84 ~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~---  160 (375)
T 1t2a_A           84 HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELY---  160 (375)
T ss_dssp             EECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGT---
T ss_pred             EEccCCCHHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhh---
Confidence            99999999999999987  48899998743221  125667889999999999999998642 11688888765544   


Q ss_pred             ccccccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHH-HHHHHHH
Q 016047          152 FEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVG-ALCVYAA  225 (396)
Q Consensus       152 ~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~  225 (396)
                          |..  ...+++|+++..|..  .|+.     |.++..+. .+.+++++++||+.+||+  +...++.. .+..++.
T Consensus       161 ----~~~--~~~~~~E~~~~~~~~--~Y~~sK~~~e~~~~~~~-~~~~~~~~i~r~~~~~gp--~~~~~~~~~~~~~~~~  229 (375)
T 1t2a_A          161 ----GKV--QEIPQKETTPFYPRS--PYGAAKLYAYWIVVNFR-EAYNLFAVNGILFNHESP--RRGANFVTRKISRSVA  229 (375)
T ss_dssp             ----CSC--SSSSBCTTSCCCCCS--HHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECT--TSCTTSHHHHHHHHHH
T ss_pred             ----CCC--CCCCCCccCCCCCCC--hhHHHHHHHHHHHHHHH-HHhCCCEEEEecccccCC--CCCCCcchHHHHHHHH
Confidence                432  145788888765543  3664     55555443 456899999999999994  32222211 1111111


Q ss_pred             -HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCch
Q 016047          226 -VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEE  304 (396)
Q Consensus       226 -i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~  304 (396)
                       +..+ ..+....|++.+.+.++++.|+   |++++.++..+.  +++||++++..+|++|+++.+++.+|.+....   
T Consensus       230 ~~~~g-~~~~~~~g~~~~~~~~i~v~Dv---a~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~---  300 (375)
T 1t2a_A          230 KIYLG-QLECFSLGNLDAKRDWGHAKDY---VEAMWLMLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWE---  300 (375)
T ss_dssp             HHHHT-SCSCEEESCTTCEECCEEHHHH---HHHHHHHHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEE---
T ss_pred             HHHcC-CCceeEeCCCCceeeeEEHHHH---HHHHHHHHhcCC--CceEEEeCCCcccHHHHHHHHHHHhCCCcccc---
Confidence             1221 2233446777766677766665   778777776533  47899999999999999999999999764210   


Q ss_pred             hhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHH
Q 016047          305 EEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFI  383 (396)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~  383 (396)
                               ...++.++....  ..+.  ...+.+..+..          .......+|++|+++ +||+|.++++++|+
T Consensus       301 ---------~~~~p~~~~~~~--~~~~--~~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~  357 (375)
T 1t2a_A          301 ---------GKNENEVGRCKE--TGKV--HVTVDLKYYRP----------TEVDFLQGDCTKAKQKLNWKPRVAFDELVR  357 (375)
T ss_dssp             ---------SCGGGCEEEETT--TCCE--EEEECGGGSCS----------SCCCBCCBCCHHHHHHHCCCCCSCHHHHHH
T ss_pred             ---------cccccccccccc--cccc--eeecCcccCCc----------ccchhhcCCHHHHHHhcCCCccCCHHHHHH
Confidence                     000000000000  0000  00000000000          000135579999986 79999999999999


Q ss_pred             HHHHHHhhC
Q 016047          384 TWIDKVKGF  392 (396)
Q Consensus       384 ~~~~~~~~~  392 (396)
                      ++++|+++.
T Consensus       358 ~~~~~~~~~  366 (375)
T 1t2a_A          358 EMVHADVEL  366 (375)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999999764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.5e-33  Score=259.96  Aligned_cols=287  Identities=14%  Similarity=0.097  Sum_probs=190.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  105 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~  105 (396)
                      |||||||||||||++|+++|++     +||+|++++|++...        .+..|    +...+.+.++|.|+|+|+...
T Consensus         1 MkILVTGatGfIG~~L~~~L~~-----~G~~V~~l~R~~~~~--------~~~~~----~~~~~~l~~~d~vihla~~~i   63 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNA-----RGHEVTLVSRKPGPG--------RITWD----ELAASGLPSCDAAVNLAGENI   63 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCTT--------EEEHH----HHHHHCCCSCSEEEECCCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCCCcC--------eeecc----hhhHhhccCCCEEEEeccCcc
Confidence            5899999999999999999999     899999999986431        12233    233456788999999987432


Q ss_pred             CC----Cc--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047          106 TN----RS--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  179 (396)
Q Consensus       106 ~~----~~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y  179 (396)
                      ..    ..  ......++|+.+|++|++++++.+.+...++++||..+       ||..  ...+.+|++|..+.+.+.+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~v-------yg~~--~~~~~~E~~p~~~~~~~~~  134 (298)
T 4b4o_A           64 LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAY-------YQPS--LTAEYDEDSPGGDFDFFSN  134 (298)
T ss_dssp             SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGG-------SCCC--SSCCBCTTCCCSCSSHHHH
T ss_pred             cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeee-------ecCC--CCCcccccCCccccchhHH
Confidence            21    11  34567899999999999999988666667777765554       4432  2567788887655433212


Q ss_pred             hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 016047          180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  259 (396)
Q Consensus       180 ~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  259 (396)
                      ...+...+......+++++++||+.|||  |+..  ....+.   ...+ .+.. ...|++.++++++|+.|+   |+++
T Consensus       135 ~~~~~e~~~~~~~~~~~~~~~r~~~v~g--~~~~--~~~~~~---~~~~-~~~~-~~~g~g~~~~~~ihv~Dv---a~a~  202 (298)
T 4b4o_A          135 LVTKWEAAARLPGDSTRQVVVRSGVVLG--RGGG--AMGHML---LPFR-LGLG-GPIGSGHQFFPWIHIGDL---AGIL  202 (298)
T ss_dssp             HHHHHHHHHCCSSSSSEEEEEEECEEEC--TTSH--HHHHHH---HHHH-TTCC-CCBTTSCSBCCEEEHHHH---HHHH
T ss_pred             HHHHHHHHHHhhccCCceeeeeeeeEEc--CCCC--chhHHH---HHHh-cCCc-ceecccCceeecCcHHHH---HHHH
Confidence            2222222222356789999999999999  4431  111111   1111 2322 346888888888888776   7777


Q ss_pred             HHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCc
Q 016047          260 IWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQP  339 (396)
Q Consensus       260 i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  339 (396)
                      +.++.++.. +++||+++++++|++|+++.+++.+|.+...               +++.|+.+..  +.....      
T Consensus       203 ~~~~~~~~~-~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~---------------pvP~~~~~~~--~g~~~~------  258 (298)
T 4b4o_A          203 THALEANHV-HGVLNGVAPSSATNAEFAQTFGAALGRRAFI---------------PLPSAVVQAV--FGRQRA------  258 (298)
T ss_dssp             HHHHHCTTC-CEEEEESCSCCCBHHHHHHHHHHHHTCCCCC---------------CBCHHHHHHH--HCHHHH------
T ss_pred             HHHHhCCCC-CCeEEEECCCccCHHHHHHHHHHHhCcCCcc---------------cCCHHHHHHH--hcchhH------
Confidence            777766544 5699999999999999999999999976432               1222322100  000000      


Q ss_pred             ccccccccceeehhhhcCcccccchhhHhhcCCCccc-cCHHHHHHHHHH
Q 016047          340 TRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFR-NSKNSFITWIDK  388 (396)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~-~~~~~~~~~~~~  388 (396)
                                  +..+.  +...+++|++++||++++ +++++|++.++.
T Consensus       259 ------------~~~l~--~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~~  294 (298)
T 4b4o_A          259 ------------IMLLE--GQKVIPRRTLATGYQYSFPELGAALKEIAEN  294 (298)
T ss_dssp             ------------HHHHC--CCCBCCHHHHHTTCCCSCCSHHHHHHHHHHC
T ss_pred             ------------HHhhC--CCEEcHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence                        00111  223578999999999998 589999888763

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=2.4e-33  Score=270.49  Aligned_cols=305  Identities=12%  Similarity=0.067  Sum_probs=206.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcC-CCCCCCCCcEEEEEeCCCCCC-----------C-------CC---CCC---eeEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPKPN-----------W-------NA---DHL---VEYVQCD   80 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~-~~~~~~~g~~V~~l~R~~~~~-----------~-------~~---~~~---v~~~~~D   80 (396)
                      |+|||||||||||++|+++|+ +     .|++|++++|.....           .       ..   ..+   ++++.+|
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   77 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRD-----TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD   77 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH-----CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHh-----CCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECC
Confidence            589999999999999999999 8     799999999875431           0       00   124   8899999


Q ss_pred             CCChHHHHHHHh--c-CCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccccc
Q 016047           81 VSDPEETQAKLS--Q-LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAF  155 (396)
Q Consensus        81 l~d~~~~~~~~~--~-~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~  155 (396)
                      ++|++++.++++  + +|.|+|+|+.....  ..++...+++|+.|+.+++++|++.+  +++|+++||..+|+...  .
T Consensus        78 l~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~--~~~iv~~SS~~v~g~~~--~  153 (397)
T 1gy8_A           78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK--CDKIIFSSSAAIFGNPT--M  153 (397)
T ss_dssp             TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGTBSCC--C
T ss_pred             CCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC--CCEEEEECCHHHhCCCC--c
Confidence            999999999888  6 89999998753221  12567789999999999999998764  67888888765554321  0


Q ss_pred             ccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC--------cchhHHHHHH
Q 016047          156 GKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS--------LMNLVGALCV  222 (396)
Q Consensus       156 g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~  222 (396)
                      +...+...+++|+++..|..  .|+.     |+++..+. .+.+++++++||++|||+.+..        ..++...+..
T Consensus       154 ~~~~~~~~~~~E~~~~~p~~--~Y~~sK~~~e~~~~~~~-~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~  230 (397)
T 1gy8_A          154 GSVSTNAEPIDINAKKSPES--PYGESKLIAERMIRDCA-EAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG  230 (397)
T ss_dssp             -----CCCCBCTTSCCBCSS--HHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHH
T ss_pred             ccccccccCcCccCCCCCCC--chHHHHHHHHHHHHHHH-HHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHH
Confidence            00001146788888765533  3664     55555543 4458999999999999964311        1222222210


Q ss_pred             -HH-HHhhhcC----------CCceecC------CccccceeeecccHHHHHHHHHHHhcCCCCC-----C---ceeeec
Q 016047          223 -YA-AVCKHEG----------IPLRFPG------TKAAWECYSIASDADLIAEHQIWAAVDPYAK-----N---EAFNCN  276 (396)
Q Consensus       223 -~~-~i~~~~~----------~~~~~~g------~~~~~~~~~~~~da~~la~~~i~~~~~~~~~-----g---~~~ni~  276 (396)
                       ++ .+..+..          .++.+.|      ++.+.++++|+.|+   |++++.++..+...     +   ++||++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dv---a~a~~~~l~~~~~~~~~~~~~~~~~~ni~  307 (397)
T 1gy8_A          231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDL---ASAHILALDYVEKLGPNDKSKYFSVFNLG  307 (397)
T ss_dssp             HHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHH---HHHHHHHHHHHHTCCTTTGGGSEEEEEES
T ss_pred             HHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHH---HHHHHHHHhcccccccccccCCCcEEEeC
Confidence             00 1111111          2455555      45566677777666   77776665432222     3   899999


Q ss_pred             CCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhc
Q 016047          277 NGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLT  356 (396)
Q Consensus       277 ~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  356 (396)
                      ++..+|++|+++.+.+.+|.+.+..            ..+                    .....               
T Consensus       308 ~~~~~s~~e~~~~i~~~~g~~~~~~------------~~~--------------------~~~~~---------------  340 (397)
T 1gy8_A          308 TSRGYSVREVIEVARKTTGHPIPVR------------ECG--------------------RREGD---------------  340 (397)
T ss_dssp             CSCCEEHHHHHHHHHHHHCCCCCEE------------EEC--------------------CCTTC---------------
T ss_pred             CCCcccHHHHHHHHHHHhCCCCCee------------eCC--------------------CCCCc---------------
Confidence            9999999999999999999764320            000                    00000               


Q ss_pred             CcccccchhhHhh-cCCCccc-cCHHHHHHHHHHHhhC
Q 016047          357 GEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVKGF  392 (396)
Q Consensus       357 ~~~~~~d~~k~~~-lG~~p~~-~~~~~~~~~~~~~~~~  392 (396)
                      .....+|++|+++ |||+|.+ +++++|+++++|+++.
T Consensus       341 ~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~  378 (397)
T 1gy8_A          341 PAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (397)
T ss_dssp             CSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             ccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence            0134579999975 7999999 9999999999999876

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=7.1e-34  Score=268.22  Aligned_cols=304  Identities=15%  Similarity=0.140  Sum_probs=193.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      .|+|+|||||||||||++|+++|++     +||+|++++|++....        ....+++++.+|++|++++.++++++
T Consensus         7 ~~~~~vlVTGatGfIG~~l~~~Ll~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   81 (338)
T 2rh8_A            7 IGKKTACVVGGTGFVASLLVKLLLQ-----KGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGC   81 (338)
T ss_dssp             --CCEEEEECTTSHHHHHHHHHHHH-----TTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTC
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCC
Confidence            3578999999999999999999999     8999999999754311        01236889999999999999999999


Q ss_pred             CCeeEEEEeccCCCccH-HHHHHhHHHHHHHHHHHHcccCCCcceEEEeccce-eecccccccccCCCCCCCccCCCCCC
Q 016047           95 TDVTHIFYVTWTNRSTE-AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTK-HYLGPFEAFGKIKPYDPPFTEDMPRL  172 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~-~y~ss~~~~g~~~~~~~p~~E~~p~~  172 (396)
                      |.|+|+|+.......++ .+.+++|+.||.+++++|++.+ .+++|+++||.. +|+..  .++.    ..+++|+.+..
T Consensus        82 D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~--~~~~----~~~~~E~~~~~  154 (338)
T 2rh8_A           82 DFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQ--LDGT----GLVVDEKNWTD  154 (338)
T ss_dssp             SEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHH--HTCS----CCCCCTTTTTC
T ss_pred             CEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCC--cCCC----CcccChhhccc
Confidence            99999987532221223 3478999999999999999863 378899888754 22211  1111    13566664221


Q ss_pred             -----CC--CCcchh-----HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceec-CC
Q 016047          173 -----DA--PNFYYT-----LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP-GT  239 (396)
Q Consensus       173 -----~~--~~~~y~-----~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-g~  239 (396)
                           |.  ....|+     .|+++.++. +..|++++++||++|||+........  .+.......  .+.+..+. +.
T Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~~lrp~~v~Gp~~~~~~~~--~~~~~~~~~--~g~~~~~~~~~  229 (338)
T 2rh8_A          155 IEFLTSAKPPTWGYPASKTLAEKAAWKFA-EENNIDLITVIPTLMAGSSLTSDVPS--SIGLAMSLI--TGNEFLINGMK  229 (338)
T ss_dssp             C-------CCCCCCTTSCCHHHHHHHHHH-HHHTCCEEEEEECEEESCCSSSSCCH--HHHHHHHHH--HTCHHHHHHHH
T ss_pred             hhhccccCCccchHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCceECCCCCCCCCc--hHHHHHHHH--cCCcccccccc
Confidence                 11  011243     477777654 45689999999999999532221111  111111111  12221111 00


Q ss_pred             c----cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccC
Q 016047          240 K----AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRV  315 (396)
Q Consensus       240 ~----~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  315 (396)
                      .    .....++++.|   +|.+++.++..+. .++.||+++ ..+|++|+++.+.+.++....+              .
T Consensus       230 ~~~~~~~~~~~i~v~D---va~a~~~~~~~~~-~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~--------------~  290 (338)
T 2rh8_A          230 GMQMLSGSVSIAHVED---VCRAHIFVAEKES-ASGRYICCA-ANTSVPELAKFLSKRYPQYKVP--------------T  290 (338)
T ss_dssp             HHHHHHSSEEEEEHHH---HHHHHHHHHHCTT-CCEEEEECS-EEECHHHHHHHHHHHCTTSCCC--------------C
T ss_pred             ccccccCcccEEEHHH---HHHHHHHHHcCCC-cCCcEEEec-CCCCHHHHHHHHHHhCCCCCCC--------------C
Confidence            0    01124555555   4777777775533 355798875 5689999999999877521111              0


Q ss_pred             CHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCC
Q 016047          316 KLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~  395 (396)
                      .+.                 .. +..                ....+|++|++++||+|+++++|+|+++++|+++.|++
T Consensus       291 ~~~-----------------~~-~~~----------------~~~~~d~~k~~~lG~~p~~~l~~gl~~~~~~~~~~~~~  336 (338)
T 2rh8_A          291 DFG-----------------DF-PPK----------------SKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLL  336 (338)
T ss_dssp             CCT-----------------TS-CSS----------------CSCCCCCHHHHHHTCCCSCCHHHHHHHHHHHHHHTTCC
T ss_pred             CCC-----------------CC-CcC----------------cceeechHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence            000                 00 000                02357999998899999999999999999999999987


Q ss_pred             C
Q 016047          396 P  396 (396)
Q Consensus       396 ~  396 (396)
                      |
T Consensus       337 ~  337 (338)
T 2rh8_A          337 Q  337 (338)
T ss_dssp             -
T ss_pred             C
Confidence            6

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.6e-33  Score=267.88  Aligned_cols=294  Identities=8%  Similarity=0.050  Sum_probs=205.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHh-----cCCCe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLS-----QLTDV   97 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~~~V   97 (396)
                      +|+|||||||||||++|+++|++     .| ++|++++|.+... .....++. +.+|+.|++.+.++++     ++|.|
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~-----~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHH-----TTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEE
Confidence            37899999999999999999998     78 8999999976431 11112344 7899999999998887     48999


Q ss_pred             eEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCc
Q 016047           98 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF  177 (396)
Q Consensus        98 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~  177 (396)
                      +|+|+.......++.+.+++|+.++.+++++|++.+  + +++++||..+|       |..  ...+++|+++..|... 
T Consensus       120 ih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~-r~V~~SS~~v~-------g~~--~~~~~~E~~~~~p~~~-  186 (357)
T 2x6t_A          120 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--I-PFLYASSAATY-------GGR--TSDFIESREYEKPLNV-  186 (357)
T ss_dssp             EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT--C-CEEEEEEGGGG-------CSC--SSCCCSSGGGCCCSSH-
T ss_pred             EECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEcchHHh-------CCC--CCCCcCCcCCCCCCCh-
Confidence            999875443334678889999999999999999864  5 78877765544       432  2347788887655433 


Q ss_pred             chhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc---chhHHHHHHHHHHhhhcCCCceecCCccc-cceeee
Q 016047          178 YYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKHEGIPLRFPGTKAA-WECYSI  248 (396)
Q Consensus       178 ~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~g~~~~-~~~~~~  248 (396)
                       |+.     |+++..+. .+.+++++++||+.|||+.....   ......+..  .+.  .+.++...+++.+ ...+++
T Consensus       187 -Y~~sK~~~E~~~~~~~-~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~i~  260 (357)
T 2x6t_A          187 -FGYSKFLFDEYVRQIL-PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNT--QLN--NGESPKLFEGSENFKRDFVY  260 (357)
T ss_dssp             -HHHHHHHHHHHHHHHG-GGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHH--HHH--TTCCCEEETTGGGCEECEEE
T ss_pred             -hHHHHHHHHHHHHHHH-HHcCCCEEEEecCeEECCCCCCCcccchHHHHHHH--HHH--cCCCcEEeCCCCcceEccEE
Confidence             654     66666654 55689999999999999543211   122222211  111  2445556666666 666666


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHH
Q 016047          249 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVW  328 (396)
Q Consensus       249 ~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (396)
                      +.|+   |++++.++..+.  +++||++++..+|+.|+++.+.+.+|.+ .. ..         .+.+.  ++       
T Consensus       261 v~Dv---a~ai~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~-~~---------~~~~~--~~-------  315 (357)
T 2x6t_A          261 VGDV---ADVNLWFLENGV--SGIFNLGTGRAESFQAVADATLAYHKKG-QI-EY---------IPFPD--KL-------  315 (357)
T ss_dssp             HHHH---HHHHHHHHHHCC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-CC-EE---------ECCCG--GG-------
T ss_pred             HHHH---HHHHHHHHhcCC--CCeEEecCCCcccHHHHHHHHHHHcCCC-Cc-ee---------cCCCc--cc-------
Confidence            6665   777777776544  8899999999999999999999999976 11 00         11110  00       


Q ss_pred             HHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCC-CccccCHHHHHHHHHHHhhC
Q 016047          329 EEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGF-SGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       329 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~-~p~~~~~~~~~~~~~~~~~~  392 (396)
                                    ..  .+        .....+|++|++++|| .|.++++++|+++++|+++.
T Consensus       316 --------------~~--~~--------~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~~~~~~~  356 (357)
T 2x6t_A          316 --------------KG--RY--------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD  356 (357)
T ss_dssp             --------------TT--SC--------CSBCCCCCHHHHHTTCCCCCCCHHHHHHHHHHHHC--
T ss_pred             --------------cc--cc--------ccccccCHHHHHHcCCCCCCCCHHHHHHHHHHHHhhc
Confidence                          00  00        0134579999999999 89999999999999999753

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-34  Score=267.46  Aligned_cols=292  Identities=9%  Similarity=0.072  Sum_probs=189.8

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhc-----CCCeeE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQ-----LTDVTH   99 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~~~V~h   99 (396)
                      +|||||||||||++|+++|++     +| ++|++++|.+... .....+++ +.+|+.|.+.+.+++++     +|.|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~-----~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHT-----TTCCCEEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHH-----CCCcEEEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhccccCCCcEEEE
Confidence            589999999999999999999     78 8999999976432 10011334 78999999999998875     899999


Q ss_pred             EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047          100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  179 (396)
Q Consensus       100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y  179 (396)
                      +|+.......++...+++|+.++.+++++|++.+  + +++++||..+|       |..  ...+++|+++..|..  .|
T Consensus        75 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~-~~v~~SS~~v~-------g~~--~~~~~~E~~~~~p~~--~Y  140 (310)
T 1eq2_A           75 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--I-PFLYASSAATY-------GGR--TSDFIESREYEKPLN--VY  140 (310)
T ss_dssp             CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT--C-CEEEEEEGGGG-------TTC--CSCBCSSGGGCCCSS--HH
T ss_pred             CcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEeeHHHh-------CCC--CCCCCCCCCCCCCCC--hh
Confidence            9875443334678889999999999999999875  5 78877765444       432  134678887765543  36


Q ss_pred             hH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc---chhHHHHHHHHHHhhhcCCCceecCCccc-cceeeecc
Q 016047          180 TL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAAVCKHEGIPLRFPGTKAA-WECYSIAS  250 (396)
Q Consensus       180 ~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~g~~~~-~~~~~~~~  250 (396)
                      +.     |+++..+. ++.+++++++||+.|||+.....   ..+...+..  .+.  .+.++..++++.+ .+.++++.
T Consensus       141 ~~sK~~~e~~~~~~~-~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~g~~~~~~~i~v~  215 (310)
T 1eq2_A          141 GYSKFLFDEYVRQIL-PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNT--QLN--NGESPKLFEGSENFKRDFVYVG  215 (310)
T ss_dssp             HHHHHHHHHHHHHHG-GGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHH--HHH--C-------------CBCEEEHH
T ss_pred             HHHHHHHHHHHHHHH-HHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHH--HHH--cCCCcEEecCCCcceEccEEHH
Confidence            54     66666654 56789999999999999542211   122222211  111  2444455666666 66777776


Q ss_pred             cHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHH
Q 016047          251 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  330 (396)
Q Consensus       251 da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (396)
                      |+   |++++.++..+.  +++||++++..+|++|+++.+.+.+|.+ ..            ...+.+.+.         
T Consensus       216 Dv---a~~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~------------~~~~~~~~~---------  268 (310)
T 1eq2_A          216 DV---ADVNLWFLENGV--SGIFNLGTGRAESFQAVADATLAYHKKG-QI------------EYIPFPDKL---------  268 (310)
T ss_dssp             HH---HHHHHHHHHHCC--CEEEEESCSCCBCHHHHHHHC----------------------------------------
T ss_pred             HH---HHHHHHHHhcCC--CCeEEEeCCCccCHHHHHHHHHHHcCCC-Cc------------eeCCCChhh---------
Confidence            65   777777766544  8899999999999999999999999876 11            001111000         


Q ss_pred             HHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCC-CccccCHHHHHHHHHHHhhC
Q 016047          331 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGF-SGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~-~p~~~~~~~~~~~~~~~~~~  392 (396)
                       ..       ..              .....+|++|++++|| .|.++++++|+++++|+++.
T Consensus       269 -~~-------~~--------------~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          269 -KG-------RY--------------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD  309 (310)
T ss_dssp             -----------C--------------CCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHTC--
T ss_pred             -hc-------cc--------------ccccccchHHHHhcCCCCCCCCHHHHHHHHHHHHHhc
Confidence             00       00              0123479999999999 89999999999999999753

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=5.8e-33  Score=264.30  Aligned_cols=311  Identities=13%  Similarity=0.077  Sum_probs=209.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCC-C------CCCCCCeeEEEecCCChHHHHHHHh--cCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKP-N------WNADHLVEYVQCDVSDPEETQAKLS--QLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~-~------~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~   95 (396)
                      |+|||||||||||++|+++|++     . |++|++++|.+.. .      .....+++++.+|++|++++.++++  ++|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   75 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIK-----NTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPD   75 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHH-----HCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEECCCchHhHHHHHHHHh-----cCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCC
Confidence            4799999999999999999998     5 7999999996521 1      1113478999999999999999998  899


Q ss_pred             CeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcc-------eEEEeccceeecccccccc-cCCCCCCCc
Q 016047           96 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLR-------HVCLQTGTKHYLGPFEAFG-KIKPYDPPF  165 (396)
Q Consensus        96 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~-------~~~~~s~~~~y~ss~~~~g-~~~~~~~p~  165 (396)
                      .|+|+|+.....  ..++...+++|+.|+.+++++|.+...+++       +|+++||..+|+......+ .......++
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~  155 (361)
T 1kew_A           76 AVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLF  155 (361)
T ss_dssp             EEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCB
T ss_pred             EEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCC
Confidence            999998753311  124567889999999999999998611244       8888887665543210000 000011267


Q ss_pred             cCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCc
Q 016047          166 TEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK  240 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~  240 (396)
                      +|++|..+..  .|+.     |+++..+. .+.+++++++||+.|||+.... ..+...+..  .+.  .+.++.+.+++
T Consensus       156 ~E~~~~~~~~--~Y~~sK~~~e~~~~~~~-~~~gi~~~~vrp~~v~G~~~~~-~~~~~~~~~--~~~--~~~~~~~~~~~  227 (361)
T 1kew_A          156 TETTAYAPSS--PYSASKASSDHLVRAWR-RTYGLPTIVTNCSNNYGPYHFP-EKLIPLVIL--NAL--EGKPLPIYGKG  227 (361)
T ss_dssp             CTTSCCCCCS--HHHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEESTTCCT-TSHHHHHHH--HHH--HTCCEEEETTS
T ss_pred             CCCCCCCCCC--ccHHHHHHHHHHHHHHH-HHhCCcEEEEeeceeECCCCCc-ccHHHHHHH--HHH--cCCCceEcCCC
Confidence            8887765543  3664     55555543 4458999999999999943211 122222211  111  24555666777


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  320 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  320 (396)
                      .+...++++.|+   |++++.++.. ...|++||++++..+|+.|+++.+++.+|.+.+..           .  ++.+.
T Consensus       228 ~~~~~~i~v~Dv---a~a~~~~~~~-~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~-----------~--p~~~~  290 (361)
T 1kew_A          228 DQIRDWLYVEDH---ARALHMVVTE-GKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKA-----------T--SYREQ  290 (361)
T ss_dssp             CCEEEEEEHHHH---HHHHHHHHHH-CCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCS-----------S--CGGGG
T ss_pred             ceeEeeEEHHHH---HHHHHHHHhC-CCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccc-----------c--ccccc
Confidence            766677776665   7777776654 34678999999999999999999999998764321           1  11000


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      +.            +  .+..    ..        ....+.+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       291 ~~------------~--~~~~----~~--------~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          291 IT------------Y--VADR----PG--------HDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             EE------------E--ECCC----TT--------CCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             ee------------e--cCCC----Cc--------ccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence            00            0  0000    00        00134689999987 79999999999999999999865

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=5.2e-33  Score=268.64  Aligned_cols=295  Identities=17%  Similarity=0.124  Sum_probs=201.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------C---------------CCCCCeeEEEec
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W---------------NADHLVEYVQCD   80 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~---------------~~~~~v~~~~~D   80 (396)
                      .++|||||||||||++|+++|++     +|++|++++|.....         .               ....+++++.+|
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSK-----KNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHh-----CCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            47999999999999999999999     899999998853110         0               012468899999


Q ss_pred             CCChHHHHHHHhc--CCCeeEEEEeccCC--CccH---HHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccc
Q 016047           81 VSDPEETQAKLSQ--LTDVTHIFYVTWTN--RSTE---AENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFE  153 (396)
Q Consensus        81 l~d~~~~~~~~~~--~~~V~h~a~~~~~~--~~~~---~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~  153 (396)
                      ++|++++.+++++  +|.|+|+|+.....  ..++   ...+++|+.|+.+++++|++.+. .++++++||..+|     
T Consensus        86 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~~~~V~~SS~~vy-----  159 (404)
T 1i24_A           86 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTMGEY-----  159 (404)
T ss_dssp             TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCGGGG-----
T ss_pred             CCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCC-CcEEEEeCcHHHh-----
Confidence            9999999999988  89999998753221  1122   34779999999999999988642 2588888765544     


Q ss_pred             ccccCCCCCCCccCC--------------CCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc-
Q 016047          154 AFGKIKPYDPPFTED--------------MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-  213 (396)
Q Consensus       154 ~~g~~~~~~~p~~E~--------------~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~-  213 (396)
                        |..   ..+++|+              .+..|  ...|+.     |+++..+. +..+++++++||+.|||++.... 
T Consensus       160 --g~~---~~~~~E~~~~~~~~~~~~~~~~~~~~--~~~Y~~sK~~~e~~~~~~~-~~~gi~~~ivrp~~v~Gp~~~~~~  231 (404)
T 1i24_A          160 --GTP---NIDIEEGYITITHNGRTDTLPYPKQA--SSFYHLSKVHDSHNIAFTC-KAWGIRATDLNQGVVYGVKTDETE  231 (404)
T ss_dssp             --CCC---SSCBCSSEEEEEETTEEEEEECCCCC--CSHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECSCCTTGG
T ss_pred             --CCC---CCCCCccccccccccccccccCCCCC--CChhHHHHHHHHHHHHHHH-HhcCCeEEEEecceeeCCCCCccc
Confidence              421   2345554              23223  334765     44444443 44589999999999999543210 


Q ss_pred             ---------------chhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCC--ceeeec
Q 016047          214 ---------------MNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKN--EAFNCN  276 (396)
Q Consensus       214 ---------------~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g--~~~ni~  276 (396)
                                     ......+..  .+.  .+.++.+.|++.+.++++|+.|+   |++++.++..+...+  ++||++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~g~~~~~~g~g~~~~~~i~v~Dv---a~a~~~~l~~~~~~g~~~~yni~  304 (404)
T 1i24_A          232 MHEELRNRLDYDAVFGTALNRFCV--QAA--VGHPLTVYGKGGQTRGYLDIRDT---VQCVEIAIANPAKAGEFRVFNQF  304 (404)
T ss_dssp             GSGGGCCCCCCSTTTCCHHHHHHH--HHH--HTCCEEEETTSCCEEEEEEHHHH---HHHHHHHHHSCCCTTCEEEEEEC
T ss_pred             cccccccccccccchhhHHHHHHH--HHH--cCCeeEEeCCCCceECcEEHHHH---HHHHHHHHhCcccCCCceEEEEC
Confidence                           112222211  111  25566667777777777777665   788887776655456  799999


Q ss_pred             CCCeeeHHHHHHHHHHH---hCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehh
Q 016047          277 NGDVFKWKHLWKVLAEQ---FGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDL  353 (396)
Q Consensus       277 ~~~~~s~~el~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  353 (396)
                      + ..+|++|+++.+++.   +|.+.....            .+                       .....         
T Consensus       305 ~-~~~s~~e~~~~i~~~~~~~g~~~~~~~------------~p-----------------------~~~~~---------  339 (404)
T 1i24_A          305 T-EQFSVNELASLVTKAGSKLGLDVKKMT------------VP-----------------------NPRVE---------  339 (404)
T ss_dssp             S-EEEEHHHHHHHHHHHHHTTTCCCCEEE------------EC-----------------------CSSCS---------
T ss_pred             C-CCCcHHHHHHHHHHHHHhhCCCccccc------------cC-----------------------cccCc---------
Confidence            8 889999999999998   665532110            00                       00000         


Q ss_pred             hhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhh
Q 016047          354 VLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       354 ~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                       .....+.+|++|+++|||+|.++++++++++++|++.
T Consensus       340 -~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~  376 (404)
T 1i24_A          340 -AEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQ  376 (404)
T ss_dssp             -CSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred             -cccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHh
Confidence             0001345799999989999999999999999999864

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=9.1e-33  Score=260.64  Aligned_cols=297  Identities=15%  Similarity=0.093  Sum_probs=201.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--------CCCCeeEEEecCCChHHHHHHHhc--CC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------ADHLVEYVQCDVSDPEETQAKLSQ--LT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~~--~~   95 (396)
                      |+|||||||||||++|+++|++     +|++|++++|.......        ...+++++.+|++|++++.+++++  +|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D   75 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQ-----NGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAID   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCC
Confidence            4799999999999999999999     89999999875322100        013578999999999999988874  88


Q ss_pred             CeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           96 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        96 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      .|+|+|+.....  ..++...+++|+.|+.+++++|++.+  +++++++||..+|       |..  ...+++|+.+..|
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~-------g~~--~~~~~~e~~~~~~  144 (338)
T 1udb_A           76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVY-------GDN--PKIPYVESFPTGT  144 (338)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGG-------CSC--CSSSBCTTSCCCC
T ss_pred             EEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEEccHHHh-------CCC--CCCCcCcccCCCC
Confidence            899998743211  12456778999999999999998764  6788888765544       421  2456778776544


Q ss_pred             CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC---------cchhHHHHHHHHHHhhhcCCCceecC-
Q 016047          174 APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS---------LMNLVGALCVYAAVCKHEGIPLRFPG-  238 (396)
Q Consensus       174 ~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~g-  238 (396)
                      . ...|+.     |+++..+.....+++++++||+++||+.+..         ..++...+   .....+.+.++...| 
T Consensus       145 ~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~  220 (338)
T 1udb_A          145 P-QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI---AQVAVGRRDSLAIFGN  220 (338)
T ss_dssp             C-SSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHH---HHHHHTSSSCEEEECS
T ss_pred             C-CChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHH---HHHHHhcCCCcEEecC
Confidence            2 223664     5555554322237999999999999964321         11222222   111222233333333 


Q ss_pred             -----CccccceeeecccHHHHHHHHHHHhcCC-CCC-CceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCC
Q 016047          239 -----TKAAWECYSIASDADLIAEHQIWAAVDP-YAK-NEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGG  311 (396)
Q Consensus       239 -----~~~~~~~~~~~~da~~la~~~i~~~~~~-~~~-g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~  311 (396)
                           ++.+.++++|+.|+   |++++.++... ... +++||++++..+|++|+++.+++.+|.+.+...         
T Consensus       221 ~~~~~~g~~~~~~i~v~Dv---a~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~---------  288 (338)
T 1udb_A          221 DYPTEDGTGVRDYIHVMDL---ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF---------  288 (338)
T ss_dssp             CSSSSSSSCEECEEEHHHH---HHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEE---------
T ss_pred             cccCCCCceeeeeEEHHHH---HHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCccee---------
Confidence                 34555666766665   66666655432 122 479999999999999999999999987633210         


Q ss_pred             cccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHh
Q 016047          312 TQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  390 (396)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~  390 (396)
                         .+                    ..+...               ....+|++|+++ |||+|+++++++|+++++|++
T Consensus       289 ---~~--------------------~~~~~~---------------~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~  330 (338)
T 1udb_A          289 ---AP--------------------RREGDL---------------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQS  330 (338)
T ss_dssp             ---EC--------------------CCTTCC---------------SBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             ---CC--------------------CCCCch---------------hhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHH
Confidence               00                    000000               034579999976 699999999999999999998


Q ss_pred             hC
Q 016047          391 GF  392 (396)
Q Consensus       391 ~~  392 (396)
                      +.
T Consensus       331 ~~  332 (338)
T 1udb_A          331 RH  332 (338)
T ss_dssp             HC
T ss_pred             hc
Confidence            65

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=7.1e-34  Score=265.59  Aligned_cols=292  Identities=11%  Similarity=0.069  Sum_probs=177.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a  101 (396)
                      |+|+|||||||||||++|+++|++     +|++|++++|+...     ++  ++.+|++|++++.+++++  +|.|+|+|
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~-----~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQ-----NNWHAVGCGFRRAR-----PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEC-------------------------CHHHHHHHCCSEEEECC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHh-----CCCeEEEEccCCCC-----CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            568999999999999999999999     89999999986543     22  788999999999888886  88999998


Q ss_pred             EeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047          102 YVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  179 (396)
Q Consensus       102 ~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y  179 (396)
                      +.....  ..++...+++|+.++.+++++|.+.+  . +++++||..+|       +.   ...+++|++|..|.  ..|
T Consensus        69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~-~~v~~SS~~v~-------~~---~~~~~~E~~~~~~~--~~Y  133 (315)
T 2ydy_A           69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVG--A-FLIYISSDYVF-------DG---TNPPYREEDIPAPL--NLY  133 (315)
T ss_dssp             -------------------CHHHHHHHHHHHHHT--C-EEEEEEEGGGS-------CS---SSCSBCTTSCCCCC--SHH
T ss_pred             cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEEchHHHc-------CC---CCCCCCCCCCCCCc--CHH
Confidence            854332  23567788999999999999999865  3 77877765544       42   15678888876553  347


Q ss_pred             hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 016047          180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  259 (396)
Q Consensus       180 ~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  259 (396)
                      +..|...+...+..+++++++||+.|||+......++...+..  .+. ..+.++...+  .+...++++.|+   |+++
T Consensus       134 ~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~--~~~~~~i~v~Dv---a~a~  205 (315)
T 2ydy_A          134 GKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFD--KVQ-FSNKSANMDH--WQQRFPTHVKDV---ATVC  205 (315)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHH--HHH-CCSSCEEEEC--SSBBCCEEHHHH---HHHH
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHH--HHH-hcCCCeeecc--CceECcEEHHHH---HHHH
Confidence            7655555444344457889999999999543211122211211  011 0234443333  344555655554   7777


Q ss_pred             HHHhcCC---CCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhC
Q 016047          260 IWAAVDP---YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQ  336 (396)
Q Consensus       260 i~~~~~~---~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (396)
                      +.++.++   ...+++||++++..+|+.|+++.+++.+|.+.....           +++.  +.               
T Consensus       206 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-----------~~~~--~~---------------  257 (315)
T 2ydy_A          206 RQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLR-----------PITD--SP---------------  257 (315)
T ss_dssp             HHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEE-----------EECS--CC---------------
T ss_pred             HHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhhee-----------cccc--cc---------------
Confidence            7666432   356789999999999999999999999998643210           1110  00               


Q ss_pred             CCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhC
Q 016047          337 LQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       337 l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                        .....+            ..+..+|++|++++||+|.++++++|+++++|++++
T Consensus       258 --~~~~~~------------~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~  299 (315)
T 2ydy_A          258 --VLGAQR------------PRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID  299 (315)
T ss_dssp             --CSSSCC------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred             --ccccCC------------CcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence              000000            013457999999889999999999999999999876

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-33  Score=258.79  Aligned_cols=280  Identities=14%  Similarity=0.061  Sum_probs=195.2

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCee
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVT   98 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~   98 (396)
                      +++.+++|||||||||||++|+++|++     +|++|++++|+              .+|++|++++.++++  ++|.|+
T Consensus         8 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~--------------~~Dl~d~~~~~~~~~~~~~d~vi   68 (292)
T 1vl0_A            8 HHHHHMKILITGANGQLGREIQKQLKG-----KNVEVIPTDVQ--------------DLDITNVLAVNKFFNEKKPNVVI   68 (292)
T ss_dssp             ----CEEEEEESTTSHHHHHHHHHHTT-----SSEEEEEECTT--------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cccccceEEEECCCChHHHHHHHHHHh-----CCCeEEeccCc--------------cCCCCCHHHHHHHHHhcCCCEEE
Confidence            556678999999999999999999999     89999999985              389999999999998  689999


Q ss_pred             EEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCC
Q 016047           99 HIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  176 (396)
Q Consensus        99 h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~  176 (396)
                      |+|+.....  ..++...+++|+.|+.+++++|++.+  + +++++||..+|       |..  ...+++|+++..|.. 
T Consensus        69 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~--~-~iv~~SS~~v~-------~~~--~~~~~~E~~~~~~~~-  135 (292)
T 1vl0_A           69 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--A-EIVQISTDYVF-------DGE--AKEPITEFDEVNPQS-  135 (292)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--C-EEEEEEEGGGS-------CSC--CSSCBCTTSCCCCCS-
T ss_pred             ECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC--C-eEEEechHHeE-------CCC--CCCCCCCCCCCCCcc-
Confidence            998753221  12567789999999999999999865  4 78887765544       431  245788888765543 


Q ss_pred             cchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHH
Q 016047          177 FYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIA  256 (396)
Q Consensus       177 ~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la  256 (396)
                       .|+..|...+.+.+..+.+++++||+.|||+  +.  ++...+..  .+.  .+.++...|+  +...++++.|   +|
T Consensus       136 -~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~--~~--~~~~~~~~--~~~--~~~~~~~~~~--~~~~~i~v~D---va  201 (292)
T 1vl0_A          136 -AYGKTKLEGENFVKALNPKYYIVRTAWLYGD--GN--NFVKTMIN--LGK--THDELKVVHD--QVGTPTSTVD---LA  201 (292)
T ss_dssp             -HHHHHHHHHHHHHHHHCSSEEEEEECSEESS--SS--CHHHHHHH--HHH--HCSEEEEESS--CEECCEEHHH---HH
T ss_pred             -HHHHHHHHHHHHHHhhCCCeEEEeeeeeeCC--Cc--ChHHHHHH--HHh--cCCcEEeecC--eeeCCccHHH---HH
Confidence             4776555544433333457999999999995  21  22222211  111  2444444553  4445555555   47


Q ss_pred             HHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhC
Q 016047          257 EHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQ  336 (396)
Q Consensus       257 ~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (396)
                      ++++.++..+  .+++||++++..+|+.|+++.+.+.+|.+....            +++...               +.
T Consensus       202 ~~~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~------------~~~~~~---------------~~  252 (292)
T 1vl0_A          202 RVVLKVIDEK--NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVT------------PCTTEE---------------FP  252 (292)
T ss_dssp             HHHHHHHHHT--CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEE------------EECSTT---------------SC
T ss_pred             HHHHHHHhcC--CCcEEEecCCCCccHHHHHHHHHHHhCCCCcee------------eccccc---------------cC
Confidence            7777776654  689999999999999999999999999764321            111000               00


Q ss_pred             CCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          337 LQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       337 l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                      ...   ..            .....+|++|+++ +||+|. +++++|+++++|+++
T Consensus       253 ~~~---~~------------~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~  292 (292)
T 1vl0_A          253 RPA---KR------------PKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQM  292 (292)
T ss_dssp             CSS---CC------------CSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHTC
T ss_pred             ccc---CC------------CccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhcC
Confidence            000   00            0145689999997 699998 999999999999974

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=1.2e-32  Score=264.20  Aligned_cols=299  Identities=15%  Similarity=0.113  Sum_probs=205.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCC--------CC-CeeEEEecCCChHHHH
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNA--------DH-LVEYVQCDVSDPEETQ   88 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~--------~~-~v~~~~~Dl~d~~~~~   88 (396)
                      ..|.++|||||||||||++|+++|++     .|++|++++|++...    ...        .. +++++.+|++|++++.
T Consensus        25 ~~M~k~vlVtGatG~IG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   99 (381)
T 1n7h_A           25 VEPRKIALITGITGQDGSYLTEFLLG-----KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLR   99 (381)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHH
T ss_pred             hhhCCeEEEEcCCchHHHHHHHHHHH-----CCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHH
Confidence            34557999999999999999999998     799999999976431    100        12 7889999999999999


Q ss_pred             HHHhc--CCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcc-----eEEEeccceeecccccccccCC
Q 016047           89 AKLSQ--LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLR-----HVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        89 ~~~~~--~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~-----~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                      +++++  +|.|+|+|+.....  ..++...+++|+.|+.+++++|.+.+  ++     +|+++||..+       ||.. 
T Consensus       100 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~--~~~~~~~~~v~~SS~~v-------yg~~-  169 (381)
T 1n7h_A          100 RWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT--IDSGRTVKYYQAGSSEM-------FGST-  169 (381)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH--HHHCCCCEEEEEEEGGG-------GTTS-
T ss_pred             HHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC--CccCCccEEEEeCcHHH-------hCCC-
Confidence            99987  48899998743221  12566788999999999999999863  33     7888776554       4432 


Q ss_pred             CCCCCccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHH-HHHHHH-HhhhcCC
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGA-LCVYAA-VCKHEGI  232 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~-i~~~~~~  232 (396)
                       .. +++|+++..|..  .|+.     |+++..+. ...+++++++|+.++||+  +...++... +..++. +..  +.
T Consensus       170 -~~-~~~E~~~~~~~~--~Y~~sK~~~E~~~~~~~-~~~~~~~~~~r~~~~~gp--~~~~~~~~~~~~~~~~~~~~--g~  240 (381)
T 1n7h_A          170 -PP-PQSETTPFHPRS--PYAASKCAAHWYTVNYR-EAYGLFACNGILFNHESP--RRGENFVTRKITRALGRIKV--GL  240 (381)
T ss_dssp             -CS-SBCTTSCCCCCS--HHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECT--TSCTTSHHHHHHHHHHHHHH--TS
T ss_pred             -CC-CCCCCCCCCCCC--chHHHHHHHHHHHHHHH-HHhCCcEEEEEeCceeCC--CCCCcchhHHHHHHHHHHHc--CC
Confidence             12 788888765543  3664     55555543 455899999999999994  432222111 111111 122  32


Q ss_pred             -CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCC
Q 016047          233 -PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGG  311 (396)
Q Consensus       233 -~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~  311 (396)
                       +....|++.+.+.++++.|+   |++++.++..+.  +++||++++..+|++|+++.+.+.+|.+....          
T Consensus       241 ~~~~~~g~~~~~~~~v~v~Dv---a~a~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~----------  305 (381)
T 1n7h_A          241 QTKLFLGNLQASRDWGFAGDY---VEAMWLMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDY----------  305 (381)
T ss_dssp             CCCEEESCTTCEEECEEHHHH---HHHHHHHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGT----------
T ss_pred             CCeEEeCCCCceeeeEEHHHH---HHHHHHHHhCCC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccc----------
Confidence             23345666666666666555   888887776533  58999999999999999999999998753210          


Q ss_pred             cccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHh
Q 016047          312 TQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  390 (396)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~  390 (396)
                       ..+..                 ....+..               .....+|++|+++ |||+|+++++++|+++++|++
T Consensus       306 -~~~~~-----------------~~~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~  352 (381)
T 1n7h_A          306 -VEIDQ-----------------RYFRPAE---------------VDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDL  352 (381)
T ss_dssp             -EEECG-----------------GGSCSSC---------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             -cccCc-----------------ccCCccc---------------cccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHH
Confidence             00000                 0000000               0134579999987 699999999999999999987


Q ss_pred             hC
Q 016047          391 GF  392 (396)
Q Consensus       391 ~~  392 (396)
                      +.
T Consensus       353 ~~  354 (381)
T 1n7h_A          353 EL  354 (381)
T ss_dssp             HH
T ss_pred             hh
Confidence            53

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-33  Score=263.72  Aligned_cols=306  Identities=15%  Similarity=0.145  Sum_probs=206.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHhc--CCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQ--LTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~   96 (396)
                      |+|||||||||||++|+++|++     .|++|++++|.....       .....+++++.+|++|++++.+++++  +|.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALS-----QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHh-----CCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCE
Confidence            5899999999999999999998     899999999853111       00123588999999999999999998  999


Q ss_pred             eeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccc-cccC------CCCCCCccC
Q 016047           97 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEA-FGKI------KPYDPPFTE  167 (396)
Q Consensus        97 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~-~g~~------~~~~~p~~E  167 (396)
                      |+|+|+.....  ..++...+++|+.|+.+++++|++.+.+ .+|+++||..+|+..... +...      .....+++|
T Consensus        77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~-~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e  155 (347)
T 1orr_A           77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSN-CNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE  155 (347)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred             EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-ceEEEeccHHHhCCCCcCCcccccccccccccccCccc
Confidence            99998753221  1256778899999999999999987521 378888876656432100 0000      000123566


Q ss_pred             CCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc--chhHHHHHHHHHHhhhcC---CCceec
Q 016047          168 DMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--MNLVGALCVYAAVCKHEG---IPLRFP  237 (396)
Q Consensus       168 ~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~i~~~~~---~~~~~~  237 (396)
                      +.+..+.  ..|+.     |+++..+. .+.+++++++||+.|||+.....  ......+..  ....+..   .++..+
T Consensus       156 ~~~~~~~--~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  230 (347)
T 1orr_A          156 STQLDFH--SPYGCSKGAADQYMLDYA-RIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQ--KAVEIKNGINKPFTIS  230 (347)
T ss_dssp             TSCCCCC--HHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHH--HHHHHHTTCCCCEEEE
T ss_pred             cCCCCCC--CchHHHHHHHHHHHHHHH-HHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHH--HHHhCcccCCCCeEEe
Confidence            6654433  33664     55555544 44589999999999999543211  111221211  1112111   155667


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcC-CCCCCceeeecCCC--eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 016047          238 GTKAAWECYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGD--VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR  314 (396)
Q Consensus       238 g~~~~~~~~~~~~da~~la~~~i~~~~~-~~~~g~~~ni~~~~--~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~  314 (396)
                      |++.+.+.++++.|+   |++++.++.. +...|++||++++.  .+|++|+++.+++.+|.+....            .
T Consensus       231 g~g~~~~~~i~v~Dv---a~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~------------~  295 (347)
T 1orr_A          231 GNGKQVRDVLHAEDM---ISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFT------------N  295 (347)
T ss_dssp             SSSCCEEECEEHHHH---HHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEE------------E
T ss_pred             cCCcceEeeEEHHHH---HHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCce------------e
Confidence            777777777776665   7777776654 23467899999886  5999999999999999764321            0


Q ss_pred             CCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          315 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      .+                    ..+..               .....+|++|+++ +||+|.++++++|+++++|+++.
T Consensus       296 ~~--------------------~~~~~---------------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  339 (347)
T 1orr_A          296 LP--------------------VRESD---------------QRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI  339 (347)
T ss_dssp             EC--------------------CCSSC---------------CSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             CC--------------------CCCCC---------------cceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHH
Confidence            00                    00000               0134579999986 69999999999999999999864

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=7.4e-33  Score=256.71  Aligned_cols=291  Identities=12%  Similarity=0.049  Sum_probs=198.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEEe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV  103 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~~  103 (396)
                      |+|||||||||||++|+++|++      |++|++++|++.          ++.+|+.|++++.+++++  +|.|+|+|+.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~------g~~V~~~~r~~~----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   64 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLAP------VGNLIALDVHSK----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTT------TSEEEEECTTCS----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhhc------CCeEEEeccccc----------cccccCCCHHHHHHHHHhcCCCEEEECccc
Confidence            4899999999999999999993      789999999752          357999999999999987  8999999875


Q ss_pred             ccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          104 TWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       104 ~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      ....  ..++...+++|+.++.+++++|++.+  + +++++||..+|       |..  ...+++|+++..|..  .|+.
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~-~~v~~SS~~vy-------~~~--~~~~~~E~~~~~p~~--~Y~~  130 (299)
T 1n2s_A           65 TAVDKAESEPELAQLLNATSVEAIAKAANETG--A-WVVHYSTDYVF-------PGT--GDIPWQETDATSPLN--VYGK  130 (299)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--C-EEEEEEEGGGS-------CCC--TTCCBCTTSCCCCSS--HHHH
T ss_pred             CCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC--C-cEEEEecccEE-------eCC--CCCCCCCCCCCCCcc--HHHH
Confidence            3321  23667889999999999999999864  4 68877765544       432  245788888766543  4776


Q ss_pred             HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 016047          182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  261 (396)
Q Consensus       182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~  261 (396)
                      .|...+...+....+++++||+.+||+...   ++...+...  +.  .+.++...|+  +...++++.|+   |++++.
T Consensus       131 sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~---~~~~~~~~~--~~--~~~~~~~~~~--~~~~~i~v~Dv---a~~~~~  198 (299)
T 1n2s_A          131 TKLAGEKALQDNCPKHLIFRTSWVYAGKGN---NFAKTMLRL--AK--ERQTLSVIND--QYGAPTGAELL---ADCTAH  198 (299)
T ss_dssp             HHHHHHHHHHHHCSSEEEEEECSEECSSSC---CHHHHHHHH--HH--HCSEEEEECS--CEECCEEHHHH---HHHHHH
T ss_pred             HHHHHHHHHHHhCCCeEEEeeeeecCCCcC---cHHHHHHHH--Hh--cCCCEEeecC--cccCCeeHHHH---HHHHHH
Confidence            555444332333348999999999994322   222222111  11  2445445554  44556665554   777777


Q ss_pred             HhcCC--CC-CCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCC
Q 016047          262 AAVDP--YA-KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQ  338 (396)
Q Consensus       262 ~~~~~--~~-~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  338 (396)
                      ++.++  .. .+++||+++++.+|++|+++.+++.+|.+....+.+.      ..+.+..               .+...
T Consensus       199 ~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~~~~~~~---------------~~~~~  257 (299)
T 1n2s_A          199 AIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTE------LNAVPTS---------------AYPTP  257 (299)
T ss_dssp             HHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCE------EEEECST---------------TSCCS
T ss_pred             HHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCcccccccc------ccccccc---------------cccCc
Confidence            66543  22 4789999999999999999999999987642211000      0000000               00000


Q ss_pred             cccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCCC
Q 016047          339 PTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~~  395 (396)
                      .   .+            .....+|++|+++ |||+|. +++++|+++++|+++.+-|
T Consensus       258 ~---~~------------~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~~i  299 (299)
T 1n2s_A          258 A---SR------------PGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTTTTI  299 (299)
T ss_dssp             S---CC------------CSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSCCC-
T ss_pred             C---CC------------CCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Confidence            0   00            0145689999997 699997 8999999999999987654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-32  Score=258.54  Aligned_cols=319  Identities=16%  Similarity=0.105  Sum_probs=204.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CC--------CCCCeeEEEecCCChHHHHHHHhc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN--------ADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~--------~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      |+|||||||||||++|+++|++     +|++|++++|++...    ..        ...+++++.+|++|++++.+++++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLE-----KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILRE   76 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHH-----CCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHh
Confidence            6899999999999999999998     799999999975421    10        024688999999999999998887


Q ss_pred             --CCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           94 --LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        94 --~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                        +|.|+|+|+.....  ..++...+++|+.|+.+++++|++.+. +..+++++||..+|       |..  ...+++|+
T Consensus        77 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~-------g~~--~~~~~~E~  147 (372)
T 1db3_A           77 VQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELY-------GLV--QEIPQKET  147 (372)
T ss_dssp             HCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGG-------TTC--CSSSBCTT
T ss_pred             cCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhh-------CCC--CCCCCCcc
Confidence              58899998854332  235677889999999999999998641 11688887765544       432  13577888


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHH-HHHHHH-HhhhcCC-CceecCCc
Q 016047          169 MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGA-LCVYAA-VCKHEGI-PLRFPGTK  240 (396)
Q Consensus       169 ~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~-i~~~~~~-~~~~~g~~  240 (396)
                      .+..|..  .|+.     |.++..+. .+.+++++++|+..+||+..+  .++... +..++. +.  .+. +....|++
T Consensus       148 ~~~~~~~--~Y~~sK~~~e~~~~~~~-~~~~~~~~~~r~~~~~gp~~~--~~~~~~~~~~~~~~~~--~g~~~~~~~g~~  220 (372)
T 1db3_A          148 TPFYPRS--PYAVAKLYAYWITVNYR-ESYGMYACNGILFNHESPRRG--ETFVTRKITRAIANIA--QGLESCLYLGNM  220 (372)
T ss_dssp             SCCCCCS--HHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTSC--TTSHHHHHHHHHHHHH--TTSCCCEEESCT
T ss_pred             CCCCCCC--hHHHHHHHHHHHHHHHH-HHhCCCeEEEEECCccCCCCC--CcchhhHHHHHHHHHH--cCCCCceeecCC
Confidence            8765543  3664     55555443 456899999999999995322  222111 111111 11  233 33456777


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  320 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  320 (396)
                      .+.+.++++.|+   |++++.++..+.  +++||++++..+|+.|+++.+.+.+|.+.....            ..++.+
T Consensus       221 ~~~~~~i~v~Dv---a~a~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~------------~~~p~~  283 (372)
T 1db3_A          221 DSLRDWGHAKDY---VKMQWMMLQQEQ--PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEG------------TGVEEK  283 (372)
T ss_dssp             TCEECCEEHHHH---HHHHHHTTSSSS--CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEES------------CGGGCE
T ss_pred             CceeeeeEHHHH---HHHHHHHHhcCC--CceEEEcCCCceeHHHHHHHHHHHhCCCccccc------------cccccc
Confidence            776777776665   788777665432  588999999999999999999999987542100            000000


Q ss_pred             --hccc--hHHHH-HHHHH-hCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          321 --MKGK--EGVWE-EIVRE-NQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       321 --~~~~--~~~~~-~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                        +...  .+.+. .+... ..+.+..+..          .......+|++|+++ |||+|.++++|+|+++++|+++.
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  352 (372)
T 1db3_A          284 GIVVSVTGHDAPGVKPGDVIIAVDPRYFRP----------AEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA  352 (372)
T ss_dssp             EEEEEECSSSCTTCCTTCEEEEECGGGCCC----------CC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccceeeccccccCC----------CchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence              0000  00000 00000 0000000000          000135579999986 79999999999999999999653

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.6e-32  Score=259.34  Aligned_cols=300  Identities=14%  Similarity=0.079  Sum_probs=204.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCC-------cEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHh-cCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP-------WKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLS-QLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-------~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-~~~   95 (396)
                      +|+|||||||||||++|+++|++     +|       ++|++++|.+..... ...+++++.+|++|++++.+++. ++|
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~-----~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d   88 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVK-----DGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPD   88 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHH-----HCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHh-----cCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCC
Confidence            47899999999999999999998     78       899999997643211 23578899999999999999885 899


Q ss_pred             CeeEEEEeccCC-CccHHHHHHhHHHHHHHHHHHHcccCC---CcceEEEeccceeecccccccccCCCCCCCccCCCCC
Q 016047           96 DVTHIFYVTWTN-RSTEAENCKINGSMFRNVLRAVIPNAP---NLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  171 (396)
Q Consensus        96 ~V~h~a~~~~~~-~~~~~~~~~~nv~gt~~ll~a~~~~~~---~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~  171 (396)
                      .|+|+|+..... ..++...+++|+.|+.+++++|++.+.   .+.+++++||..+|       |..  ...+++|++|.
T Consensus        89 ~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~-------~~~--~~~~~~E~~~~  159 (342)
T 2hrz_A           89 VIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVF-------GAP--LPYPIPDEFHT  159 (342)
T ss_dssp             EEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGC-------CSS--CCSSBCTTCCC
T ss_pred             EEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhh-------CCC--CCCCcCCCCCC
Confidence            999998753211 125677889999999999999987531   25788888765544       431  13578888876


Q ss_pred             CCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceee-cCCCCc--chhHHHHHHHHHHhhhcCCCceecCCcccc
Q 016047          172 LDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFG-FSPYSL--MNLVGALCVYAAVCKHEGIPLRFPGTKAAW  243 (396)
Q Consensus       172 ~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G-~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~  243 (396)
                      .|..  .|+.     |+++.++. .+.+++.+++|++.||| ++....  ..+...+   +. ....+.+..+++.+...
T Consensus       160 ~~~~--~Y~~sK~~~e~~~~~~~-~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~  232 (342)
T 2hrz_A          160 TPLT--SYGTQKAICELLLSDYS-RRGFFDGIGIRLPTICIRPGKPNAAASGFFSNI---LR-EPLVGQEAVLPVPESIR  232 (342)
T ss_dssp             CCSS--HHHHHHHHHHHHHHHHH-HTTSCEEEEEEECEETTCCSSCCCSGGGHHHHH---HH-HHHTTCCEEECSCTTCE
T ss_pred             CCcc--hHHHHHHHHHHHHHHHH-HhcCCCceeEEeeeEEecCCCCcchhHHHHHHH---HH-HHhcCCCeeccCCCccc
Confidence            6543  3664     56555554 56689999999999998 332111  1122211   11 01124454455554444


Q ss_pred             ceeeecccHHHHHHHHHHHhcCCCC---CCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047          244 ECYSIASDADLIAEHQIWAAVDPYA---KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  320 (396)
Q Consensus       244 ~~~~~~~da~~la~~~i~~~~~~~~---~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  320 (396)
                      ..++++.|   +|++++.++..+..   .+++||++ +..+|++|+++.+.+.+|.+.....          ...+... 
T Consensus       233 ~~~~~v~D---va~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~----------~~~~~~~-  297 (342)
T 2hrz_A          233 HWHASPRS---AVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALI----------RREPNEM-  297 (342)
T ss_dssp             EEEECHHH---HHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTE----------EECCCHH-
T ss_pred             eeeEehHH---HHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccce----------eeccCcc-
Confidence            44555555   47777777655432   57899996 5789999999999999987642100          0000000 


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHh
Q 016047          321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVK  390 (396)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~  390 (396)
                             ...+   .          ..+          ...+|++|++++||+|.++++++|+++++|++
T Consensus       298 -------~~~~---~----------~~~----------~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          298 -------IMRM---C----------EGW----------APGFEAKRARELGFTAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             -------HHHH---H----------TTS----------CCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS
T ss_pred             -------hhhh---h----------ccc----------ccccChHHHHHcCCCCCCCHHHHHHHHHHHhc
Confidence                   0000   0          000          12479999999999999999999999999998

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.1e-31  Score=253.58  Aligned_cols=314  Identities=13%  Similarity=0.089  Sum_probs=207.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------CCCCCeeEEEecCCChHHHHHHHhcC--C
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLSQL--T   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~~~--~   95 (396)
                      +|+|||||||||||++|+++|++     +|++|++++|++....       ....+++++.+|++|++++.++++++  |
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   77 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLE-----KGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPD   77 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCC
Confidence            47999999999999999999999     8999999999864321       11246889999999999999999874  8


Q ss_pred             CeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           96 DVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        96 ~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      .|+|+|+.....  ..++...+++|+.|+.+++++|.+.+. ..+++++||..+|       |..  ...+++|+.+..+
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~vy-------g~~--~~~~~~e~~~~~~  147 (345)
T 2z1m_A           78 EVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKP-DTKFYQASTSEMF-------GKV--QEIPQTEKTPFYP  147 (345)
T ss_dssp             EEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TCEEEEEEEGGGG-------CSC--SSSSBCTTSCCCC
T ss_pred             EEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEEechhhc-------CCC--CCCCCCccCCCCC
Confidence            899998753321  235677899999999999999997642 2688888765544       432  2456788877655


Q ss_pred             CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhH-HHHHHHH-HHhhhcCCCceecCCcccccee
Q 016047          174 APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYA-AVCKHEGIPLRFPGTKAAWECY  246 (396)
Q Consensus       174 ~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~-~i~~~~~~~~~~~g~~~~~~~~  246 (396)
                      ..  .|+.     |+++..+. .+.+++++++|+.++||+  +...+.. ..+...+ .+..+ ..+....+++.+.+.+
T Consensus       148 ~~--~Y~~sK~~~e~~~~~~~-~~~~~~~~~~r~~~~~gp--g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  221 (345)
T 2z1m_A          148 RS--PYAVAKLFGHWITVNYR-EAYNMFACSGILFNHESP--LRGIEFVTRKITYSLARIKYG-LQDKLVLGNLNAKRDW  221 (345)
T ss_dssp             CS--HHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECT--TSCTTSHHHHHHHHHHHHHTT-SCSCEEESCTTCEECC
T ss_pred             CC--hhHHHHHHHHHHHHHHH-HHhCCceEeeeeeeecCC--CCCCcchhHHHHHHHHHHHcC-CCCeeeeCCCCceeee
Confidence            43  3664     55555543 455799999999999994  4322211 1111111 11111 1222345666655666


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchH
Q 016047          247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEG  326 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (396)
                      +++.|+   |++++.++..+.  +++||++++..+|++|+++.+++.+|.+....            ..+++.++.... 
T Consensus       222 ~~v~Dv---a~a~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~------------~~~~p~~~~~~~-  283 (345)
T 2z1m_A          222 GYAPEY---VEAMWLMMQQPE--PDDYVIATGETHTVREFVEKAAKIAGFDIEWV------------GEGINEKGIDRN-  283 (345)
T ss_dssp             EEHHHH---HHHHHHHHTSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEE------------SCGGGCEEEETT-
T ss_pred             EEHHHH---HHHHHHHHhCCC--CceEEEeCCCCccHHHHHHHHHHHhCCCcccc------------cccccccccccc-
Confidence            666555   888887776433  47899999999999999999999999764310            001111110000 


Q ss_pred             HHHHHHHH-hCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          327 VWEEIVRE-NQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       327 ~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                          +... ....+.....          .......+|++|+++ +||+|+++++++|+++++|+++
T Consensus       284 ----~~~~~~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~  336 (345)
T 2z1m_A          284 ----TGKVIVEVSEEFFRP----------AEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLK  336 (345)
T ss_dssp             ----TCCEEEEECGGGSCS----------SCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             ----ccccccccCcccCCC----------CCcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHH
Confidence                0000 0000000000          000134579999986 7999999999999999999875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=9.7e-32  Score=254.18  Aligned_cols=289  Identities=17%  Similarity=0.150  Sum_probs=199.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      ..+++|||||||||||++|+++|++     .|++|++++|.+...      +....+++++.+|+.++.     +.++|.
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~   94 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMM-----DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YIEVDQ   94 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CCCCSE
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHH-----CCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hcCCCE
Confidence            3457999999999999999999998     799999999964321      112357899999998863     567899


Q ss_pred             eeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC-----
Q 016047           97 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM-----  169 (396)
Q Consensus        97 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~-----  169 (396)
                      |+|+|+.....  ..++...+++|+.++.+++++|++.+  + +++++||..+|       |..  ...+++|+.     
T Consensus        95 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~-~~v~~SS~~v~-------g~~--~~~~~~E~~~~~~~  162 (343)
T 2b69_A           95 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--A-RLLLASTSEVY-------GDP--EVHPQSEDYWGHVN  162 (343)
T ss_dssp             EEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--C-EEEEEEEGGGG-------BSC--SSSSBCTTCCCBCC
T ss_pred             EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--C-cEEEECcHHHh-------CCC--CCCCCcccccccCC
Confidence            99998753221  23567788999999999999999875  3 67777765544       421  134566663     


Q ss_pred             CCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc-chhHHHHHHHHHHhhhcCCCceecCCcccc
Q 016047          170 PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-MNLVGALCVYAAVCKHEGIPLRFPGTKAAW  243 (396)
Q Consensus       170 p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~  243 (396)
                      |..+  ...|+.     |+++..+. ++.+++++++||+.|||+..... ......+..  .+.  .+.++.+++++.+.
T Consensus       163 ~~~~--~~~Y~~sK~~~E~~~~~~~-~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~  235 (343)
T 2b69_A          163 PIGP--RACYDEGKRVAETMCYAYM-KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFIL--QAL--QGEPLTVYGSGSQT  235 (343)
T ss_dssp             SSST--THHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTCCTTCCCHHHHHHH--HHH--HTCCEEEESSSCCE
T ss_pred             CCCC--CCchHHHHHHHHHHHHHHH-HHhCCcEEEEEEcceeCcCCCCCcccHHHHHHH--HHH--cCCCceEcCCCCeE
Confidence            3222  334664     55555543 45689999999999999542211 122222211  111  25555667777766


Q ss_pred             ceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhcc
Q 016047          244 ECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKG  323 (396)
Q Consensus       244 ~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (396)
                      +.++++.|+   |++++.++..+  .+++||++++..+|++|+++.+++.+|.+.....          .+..       
T Consensus       236 ~~~v~v~Dv---a~a~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~----------~p~~-------  293 (343)
T 2b69_A          236 RAFQYVSDL---VNGLVALMNSN--VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQF----------LSEA-------  293 (343)
T ss_dssp             EECEEHHHH---HHHHHHHHTSS--CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEE----------ECCC-------
T ss_pred             EeeEeHHHH---HHHHHHHHhcC--CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCcee----------CCCC-------
Confidence            677766665   77777766543  3789999999999999999999999997643210          0000       


Q ss_pred             chHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          324 KEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       324 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                     ...               .....+|++|+++ |||+|.++++++|+++++|++++
T Consensus       294 ---------------~~~---------------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  333 (343)
T 2b69_A          294 ---------------QDD---------------PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE  333 (343)
T ss_dssp             ---------------TTC---------------CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ---------------CCC---------------CceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence                           000               0033479999986 69999999999999999999754

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=4.5e-32  Score=254.04  Aligned_cols=299  Identities=12%  Similarity=0.060  Sum_probs=189.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC-CCCC--CC-----CC--CCCeeEEEecCCChHHHHHHHhcC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR-RPKP--NW-----NA--DHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R-~~~~--~~-----~~--~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      +|+|||||||||||++|+++|++     +|++|++++| ++..  ..     ..  ..+++++.+|++|++++.++++++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   75 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLE-----NGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGC   75 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTC
T ss_pred             CCEEEEECChhHHHHHHHHHHHH-----CCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCC
Confidence            36899999999999999999998     8999999998 5422  00     00  124678999999999999999999


Q ss_pred             CCeeEEEEeccCCCcc-HHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           95 TDVTHIFYVTWTNRST-EAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~-~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      |.|+|+|+.......+ ....+++|+.|+.+++++|.+. .++++|+++||...+      ++.. ....+++|+.+..+
T Consensus        76 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~-~~~~~iV~~SS~~~~------~~~~-~~~~~~~e~~~~~~  147 (322)
T 2p4h_X           76 VGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNS-KTVKRFIYTSSGSAV------SFNG-KDKDVLDESDWSDV  147 (322)
T ss_dssp             SEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTC-SSCCEEEEEEEGGGT------SCSS-SCCSEECTTCCCCH
T ss_pred             CEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccHHHc------ccCC-CCCeecCCccccch
Confidence            9999998532111112 2447899999999999999986 237788888765422      2211 11235666653210


Q ss_pred             ------CCC-cchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047          174 ------APN-FYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  241 (396)
Q Consensus       174 ------~~~-~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  241 (396)
                            .+. ..|+.     |+++.++. +..+++++++||++|||+........  .+.......  .+.+..++.  .
T Consensus       148 ~~~~~~~p~~~~Y~~sK~~~e~~~~~~~-~~~gi~~~~lrp~~v~g~~~~~~~~~--~~~~~~~~~--~g~~~~~~~--~  220 (322)
T 2p4h_X          148 DLLRSVKPFGWNYAVSKTLAEKAVLEFG-EQNGIDVVTLILPFIVGRFVCPKLPD--SIEKALVLV--LGKKEQIGV--T  220 (322)
T ss_dssp             HHHHHHCCTTHHHHHHHHHHHHHHHHHH-HHTTCCEEEEEECEEESCCCSSSCCH--HHHHHTHHH--HSCGGGCCE--E
T ss_pred             hhhcccCcccccHHHHHHHHHHHHHHHH-HhcCCcEEEEcCCceECCCCCCCCCc--hHHHHHHHH--hCCCccCcC--C
Confidence                  111 13765     44444443 45689999999999999532211111  111110111  132222222  1


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHh
Q 016047          242 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  321 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (396)
                      + ..++++.   ++|.+++.++..+...| .|| +++..+|++|+++.+.+.++..  ..            +...    
T Consensus       221 ~-~~~i~v~---Dva~a~~~~~~~~~~~g-~~~-~~~~~~s~~e~~~~i~~~~~~~--~~------------~~~~----  276 (322)
T 2p4h_X          221 R-FHMVHVD---DVARAHIYLLENSVPGG-RYN-CSPFIVPIEEMSQLLSAKYPEY--QI------------LTVD----  276 (322)
T ss_dssp             E-EEEEEHH---HHHHHHHHHHHSCCCCE-EEE-CCCEEEEHHHHHHHHHHHCTTS--CC------------CCTT----
T ss_pred             C-cCEEEHH---HHHHHHHHHhhCcCCCC-CEE-EcCCCCCHHHHHHHHHHhCCCC--CC------------CCCc----
Confidence            1 1445544   45888877776544344 499 5668899999999998876421  11            0000    


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCC
Q 016047          322 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~  395 (396)
                                  .+  ..  ...           . ....+|++|++++||+|+++++++|+++++|+++.|+|
T Consensus       277 ------------~~--~~--~~~-----------~-~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~~~  322 (322)
T 2p4h_X          277 ------------EL--KE--IKG-----------A-RLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL  322 (322)
T ss_dssp             ------------TT--TT--CCC-----------E-ECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHHHTCC
T ss_pred             ------------cc--cC--CCC-----------C-cceecccHHHHHhCCccCCCHHHHHHHHHHHHHhcCCC
Confidence                        00  00  000           0 13457999998899999999999999999999988875

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=8.2e-32  Score=251.76  Aligned_cols=291  Identities=13%  Similarity=0.114  Sum_probs=200.5

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCeeEEEE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVTHIFY  102 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~h~a~  102 (396)
                      +|||||||||||++|+++|++     .  |++|++++|++...    .+++++.+|++|++++.++++  ++|.|+|+|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~   71 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAE-----KYGKKNVIASDIVQRDT----GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAG   71 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHH-----HHCGGGEEEEESSCCCC----TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHH-----hcCCCEEEEecCCCccc----cCceEEEecCCCHHHHHHHHhhcCCcEEEECCc
Confidence            589999999999999999998     6  79999999875432    257899999999999999998  7899999987


Q ss_pred             eccCC-CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          103 VTWTN-RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       103 ~~~~~-~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      ..... ..++...+++|+.|+.+++++|++.+  +++++++||..+|+..       . ...+.+|+.|..|..  .|+.
T Consensus        72 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~~~-------~-~~~~~~e~~~~~p~~--~Y~~  139 (317)
T 3ajr_A           72 ILSAKGEKDPALAYKVNMNGTYNILEAAKQHR--VEKVVIPSTIGVFGPE-------T-PKNKVPSITITRPRT--MFGV  139 (317)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCCTT-------S-CSSSBCSSSCCCCCS--HHHH
T ss_pred             ccCCccccChHHHhhhhhHHHHHHHHHHHHcC--CCEEEEecCHHHhCCC-------C-CCCCccccccCCCCc--hHHH
Confidence            53221 12567788999999999999999864  6788888766555321       1 124566776655543  3664


Q ss_pred             -----HHHHHHHhhcCCCeeEEEEcCCceeecC--CCCc-chhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHH
Q 016047          182 -----EDILFEEVEKKEELSWSVHRPDTIFGFS--PYSL-MNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDAD  253 (396)
Q Consensus       182 -----e~~l~~~~~~~~~~~~~ilRp~~v~G~~--~~~~-~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~  253 (396)
                           |+++..+. +..+++++++||+.+||+.  ++.. .+....+  +....  ...++..++++.+.+.++++.|+ 
T Consensus       140 sK~~~e~~~~~~~-~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~i~v~Dv-  213 (317)
T 3ajr_A          140 TKIAAELLGQYYY-EKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEI--FYYAV--KREKYKCYLAPNRALPMMYMPDA-  213 (317)
T ss_dssp             HHHHHHHHHHHHH-HHHCCEEEEEEECEEECSSSCCCSCSSTHHHHH--HHHHH--TTCCEEECSCTTCCEEEEEHHHH-
T ss_pred             HHHHHHHHHHHHH-HhcCCeEEEEecCcEeccCCCCCCcchhHHHHH--HHHHH--hCCCceeecCccceeeeeEHHHH-
Confidence                 55555443 4568999999999999954  2211 1222211  11111  12334455656666677776665 


Q ss_pred             HHHHHHHHHhcCCCC---CCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHH
Q 016047          254 LIAEHQIWAAVDPYA---KNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  330 (396)
Q Consensus       254 ~la~~~i~~~~~~~~---~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (396)
                        |++++.++..+..   .+++||+++ ..+|+.|+++.+.+.+|.....+           .+ ....          .
T Consensus       214 --a~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~~i~~-----------~~-~~~~----------~  268 (317)
T 3ajr_A          214 --LKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPEFEIEY-----------KE-DFRD----------K  268 (317)
T ss_dssp             --HHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCSCCEEE-----------CC-CHHH----------H
T ss_pred             --HHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCcccccc-----------cc-ccch----------h
Confidence              7777776665432   358999986 67999999999999887321110           00 0000          0


Q ss_pred             HHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          331 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      + .            ..+          ...+|++|+++ +||+|.++++++|+++++|+++.
T Consensus       269 ~-~------------~~~----------~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  308 (317)
T 3ajr_A          269 I-A------------ATW----------PESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEK  308 (317)
T ss_dssp             H-H------------TTS----------CSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             h-c------------ccc----------ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence            0 0            000          23479999986 69999999999999999999764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=3.9e-32  Score=256.25  Aligned_cols=300  Identities=14%  Similarity=0.158  Sum_probs=193.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCC-CCCeeEEEecCCChHHHHHHHhcCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNA-DHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~-~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +++|||||||||||++|+++|++     +||+|++++|++...        ... ..+++++.+|++|++++.++++++|
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   79 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLE-----RGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCT   79 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCS
T ss_pred             CCEEEEECCchHHHHHHHHHHHH-----CCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCC
Confidence            47999999999999999999999     899999999976421        110 1257899999999999999999999


Q ss_pred             CeeEEEEeccCCCcc-HHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC-
Q 016047           96 DVTHIFYVTWTNRST-EAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD-  173 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~-~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~-  173 (396)
                      .|+|+|+.......+ ....+++|+.||.+++++|++.+ .+++|+++||...|      |+.. ....+++|+.+... 
T Consensus        80 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~------~~~~-~~~~~~~E~~~~~~~  151 (337)
T 2c29_D           80 GVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTV------NIQE-HQLPVYDESCWSDME  151 (337)
T ss_dssp             EEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGT------SCSS-SCCSEECTTCCCCHH
T ss_pred             EEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhc------ccCC-CCCcccCcccCCchh
Confidence            999998753221223 34578999999999999998864 36789988765422      2211 11234566543210 


Q ss_pred             ------CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          174 ------APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       174 ------~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                            .+...|+.     |+++.++. +..+++++++||++|||+.......  ..+.......  .+.+..+ +...+
T Consensus       152 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~~lrp~~v~Gp~~~~~~~--~~~~~~~~~~--~g~~~~~-~~~~~  225 (337)
T 2c29_D          152 FCRAKKMTAWMYFVSKTLAEQAAWKYA-KENNIDFITIIPTLVVGPFIMSSMP--PSLITALSPI--TGNEAHY-SIIRQ  225 (337)
T ss_dssp             HHHHHCCTTHHHHHHHHHHHHHHHHHH-HHHTCCEEEEEECEEESCCSCSSCC--HHHHHHTHHH--HTCGGGH-HHHTE
T ss_pred             hhcccCCccchHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCceECCCCCCCCC--chHHHHHHHH--cCCCccc-cccCC
Confidence                  12234765     44444433 4468999999999999953222111  1111100001  1222111 11111


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhc
Q 016047          243 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  322 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (396)
                       ..++++.|+   |.+++.++..+. .++.|++++ ..+|++|+++.+.+.++....+              ..+     
T Consensus       226 -~~~i~v~Dv---a~a~~~~~~~~~-~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~--------------~~~-----  280 (337)
T 2c29_D          226 -GQFVHLDDL---CNAHIYLFENPK-AEGRYICSS-HDCIILDLAKMLREKYPEYNIP--------------TEF-----  280 (337)
T ss_dssp             -EEEEEHHHH---HHHHHHHHHCTT-CCEEEEECC-EEEEHHHHHHHHHHHCTTSCCC--------------SCC-----
T ss_pred             -CCEEEHHHH---HHHHHHHhcCcc-cCceEEEeC-CCCCHHHHHHHHHHHCCCccCC--------------CCC-----
Confidence             235555554   777777776543 345687654 5689999999999977321110              000     


Q ss_pred             cchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhCCCCC
Q 016047          323 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGFKIVP  396 (396)
Q Consensus       323 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~~~~~  396 (396)
                                  .+.. ..               .....+|++|++++||+|+++++|+|+++++|+++.|++|
T Consensus       281 ------------~~~~-~~---------------~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  326 (337)
T 2c29_D          281 ------------KGVD-EN---------------LKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLP  326 (337)
T ss_dssp             ------------TTCC-TT---------------CCCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHHHTTSSC
T ss_pred             ------------Cccc-CC---------------CccccccHHHHHHcCCCcCCCHHHHHHHHHHHHHHcCCCC
Confidence                        0000 00               0134579999987899999999999999999999999875

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.98  E-value=3.9e-32  Score=250.26  Aligned_cols=278  Identities=16%  Similarity=0.104  Sum_probs=190.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      .|.|+|||||| ||||++|+++|++     +||+|++++|++.... ....+++++.+|+.|.+     +.++|.|+|+|
T Consensus         3 ~m~~~ilVtGa-G~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a   71 (286)
T 3ius_A            3 AMTGTLLSFGH-GYTARVLSRALAP-----QGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLIST   71 (286)
T ss_dssp             --CCEEEEETC-CHHHHHHHHHHGG-----GTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred             CCcCcEEEECC-cHHHHHHHHHHHH-----CCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECC
Confidence            46689999998 9999999999999     8999999999864320 11257899999999954     78899999997


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      +....  ..         ..+++++++|++...++++++++||..+|       |..  ...+++|+++..|..  .|+.
T Consensus        72 ~~~~~--~~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vy-------g~~--~~~~~~E~~~~~p~~--~Y~~  129 (286)
T 3ius_A           72 APDSG--GD---------PVLAALGDQIAARAAQFRWVGYLSTTAVY-------GDH--DGAWVDETTPLTPTA--ARGR  129 (286)
T ss_dssp             CCBTT--BC---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGG-------CCC--TTCEECTTSCCCCCS--HHHH
T ss_pred             Ccccc--cc---------HHHHHHHHHHHhhcCCceEEEEeecceec-------CCC--CCCCcCCCCCCCCCC--HHHH
Confidence            74322  11         13568899998743357899988865544       432  245788988876643  4776


Q ss_pred             HHHHHHHhhcC-CCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHH
Q 016047          182 EDILFEEVEKK-EELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQI  260 (396)
Q Consensus       182 e~~l~~~~~~~-~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i  260 (396)
                      .|...+..... .+++++++||+.+||+..+...    .+      .  .+.+..+.+. .+.+.++++.|+   |++++
T Consensus       130 sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~----~~------~--~~~~~~~~~~-~~~~~~i~v~Dv---a~a~~  193 (286)
T 3ius_A          130 WRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFS----KL------G--KGGIRRIIKP-GQVFSRIHVEDI---AQVLA  193 (286)
T ss_dssp             HHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSST----TS------S--SSCCCEEECT-TCCBCEEEHHHH---HHHHH
T ss_pred             HHHHHHHHHHhhcCCCEEEEeccceECCCchHHH----HH------h--cCCccccCCC-CcccceEEHHHH---HHHHH
Confidence            65555544333 4899999999999995322211    01      1  2444444444 355667766665   78888


Q ss_pred             HHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcc
Q 016047          261 WAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPT  340 (396)
Q Consensus       261 ~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  340 (396)
                      .++..+. .+++||++++..+|+.|+++.+++.+|.+.+...           +...    ....+.    ...      
T Consensus       194 ~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~-----------~~~~----~~~~~~----~~~------  247 (286)
T 3ius_A          194 ASMARPD-PGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAV-----------DFDK----ADLTPM----ARS------  247 (286)
T ss_dssp             HHHHSCC-TTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEE-----------EGGG----SCCCHH----HHH------
T ss_pred             HHHhCCC-CCCEEEEeCCCCccHHHHHHHHHHHcCCCCCccc-----------chhh----hccChh----HHH------
Confidence            8777654 6789999999999999999999999998754210           0000    000000    000      


Q ss_pred             cccccccceeehhhhcCcccccchhhHhh-cCCCccc-cCHHHHHHHHHHH
Q 016047          341 RLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKV  389 (396)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~~~~~~~~~~~  389 (396)
                                    +...+..+|++|+++ |||+|++ +++++|+++++.+
T Consensus       248 --------------~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~~  284 (286)
T 3ius_A          248 --------------FYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQADA  284 (286)
T ss_dssp             --------------TTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHTC
T ss_pred             --------------hhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHhc
Confidence                          001145689999998 6999999 7999999998743

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.98  E-value=2.1e-31  Score=274.80  Aligned_cols=304  Identities=15%  Similarity=0.118  Sum_probs=208.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHh--c
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--Q   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~--~   93 (396)
                      ++|+|||||||||||++|+++|++     +|++|++++|.+....        ....+++++.+|++|++++.++++  +
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~   84 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIE-----NGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYK   84 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCC
Confidence            357999999999999999999998     7999999999754310        012468899999999999999998  7


Q ss_pred             CCCeeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC
Q 016047           94 LTDVTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR  171 (396)
Q Consensus        94 ~~~V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~  171 (396)
                      +|.|+|+|+.....  ...+.+.+++|+.++.+++++|++.+  +++++++||..+|+... ..    +...+++|+.+.
T Consensus        85 ~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~~iV~~SS~~vyg~~~-~~----~~~~~~~E~~~~  157 (699)
T 1z45_A           85 IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN--VSKFVFSSSATVYGDAT-RF----PNMIPIPEECPL  157 (699)
T ss_dssp             CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCCGG-GS----TTCCSBCTTSCC
T ss_pred             CCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEECcHHHhCCCc-cc----cccCCccccCCC
Confidence            89999998743211  12356678999999999999998864  67888888766554321 00    113567787775


Q ss_pred             CCCCCcchhH-----HHHHHHHhhcC-CCeeEEEEcCCceeecCCCCc---------chhHHHHHHHHHHhhhcCCCcee
Q 016047          172 LDAPNFYYTL-----EDILFEEVEKK-EELSWSVHRPDTIFGFSPYSL---------MNLVGALCVYAAVCKHEGIPLRF  236 (396)
Q Consensus       172 ~~~~~~~y~~-----e~~l~~~~~~~-~~~~~~ilRp~~v~G~~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~  236 (396)
                      .|..  .|+.     |+++..+.... .+++++++||++|||+.+...         .++...+   .....+.+.++.+
T Consensus       158 ~p~~--~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~  232 (699)
T 1z45_A          158 GPTN--PYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYM---AQVAVGRREKLYI  232 (699)
T ss_dssp             CCCS--HHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH---HHHHTTSSSCCCC
T ss_pred             CCCC--hHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHH---HHHHhcCCCceEE
Confidence            5533  3664     55555543121 689999999999999654321         1222211   1112222234444


Q ss_pred             cC------CccccceeeecccHHHHHHHHHHHhcCC------CCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCch
Q 016047          237 PG------TKAAWECYSIASDADLIAEHQIWAAVDP------YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEE  304 (396)
Q Consensus       237 ~g------~~~~~~~~~~~~da~~la~~~i~~~~~~------~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~  304 (396)
                      .|      ++.+.+.++++.|+   |++++.++...      ...+++||++++..+|++|+++.+++.+|.+.+...  
T Consensus       233 ~g~~~~~~~g~~~~~~i~v~Dv---a~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~--  307 (699)
T 1z45_A          233 FGDDYDSRDGTPIRDYIHVVDL---AKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV--  307 (699)
T ss_dssp             C------CCSSCEECEEEHHHH---HHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC----
T ss_pred             eCCcccCCCCCeeEeeEEHHHH---HHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCcee--
Confidence            44      45566677776665   66666655421      233579999999999999999999999997643210  


Q ss_pred             hhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHH
Q 016047          305 EEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFI  383 (396)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~  383 (396)
                                ..                .    .....               ....+|++|+++ |||+|.++++++|+
T Consensus       308 ----------~~----------------~----~~~~~---------------~~~~~d~~ka~~~LG~~p~~~l~egl~  342 (699)
T 1z45_A          308 ----------TG----------------R----RAGDV---------------LNLTAKPDRAKRELKWQTELQVEDSCK  342 (699)
T ss_dssp             -------------------------------------C---------------CCCCBCCHHHHHHTCCCCCCCHHHHHH
T ss_pred             ----------cC----------------C----CCCcc---------------ccccCCHHHHHHhcCCCCCCCHHHHHH
Confidence                      00                0    00000               034579999986 79999999999999


Q ss_pred             HHHHHHhhCCC
Q 016047          384 TWIDKVKGFKI  394 (396)
Q Consensus       384 ~~~~~~~~~~~  394 (396)
                      ++++|+++.+.
T Consensus       343 ~~~~w~~~~~~  353 (699)
T 1z45_A          343 DLWKWTTENPF  353 (699)
T ss_dssp             HHHHHHHHCTT
T ss_pred             HHHHHHHhCCc
Confidence            99999987754

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.97  E-value=6.2e-31  Score=269.33  Aligned_cols=314  Identities=16%  Similarity=0.203  Sum_probs=211.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHH-HHHHHhcCCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEE-TQAKLSQLTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~-~~~~~~~~~~V~h   99 (396)
                      ++|+|||||||||||++|+++|++     . |++|++++|++...  .....+++++.+|++|+++ +.++++++|.|+|
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~-----~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih  388 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLR-----EDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP  388 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHH-----SSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHh-----cCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence            347899999999999999999998     5 89999999976532  1123578999999999865 7778899999999


Q ss_pred             EEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC---CC-
Q 016047          100 IFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR---LD-  173 (396)
Q Consensus       100 ~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~---~~-  173 (396)
                      +|+.....  ..++.+.+++|+.|+.+++++|++.+   ++++++||..+|       |..  ...+++|+++.   .| 
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~r~V~~SS~~vy-------g~~--~~~~~~E~~~~~~~~p~  456 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVY-------GMC--SDKYFDEDHSNLIVGPV  456 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGG-------BTC--CSSSBCTTTCCEEECCT
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC---CEEEEEecHHHc-------CCC--CCcccCCCccccccCcc
Confidence            98754321  12567788999999999999999864   688888765544       421  13467777653   11 


Q ss_pred             -CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc-------chhHHHHHHHHHHhhhcCCCceecCCc
Q 016047          174 -APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL-------MNLVGALCVYAAVCKHEGIPLRFPGTK  240 (396)
Q Consensus       174 -~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~g~~  240 (396)
                       .+...|+.     |+++..+. ++.+++++++||++|||+.....       ......+..  .+.  .+.++..++++
T Consensus       457 ~~p~~~Y~~sK~~~E~~~~~~~-~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~--~~~--~g~~~~~~g~g  531 (660)
T 1z7e_A          457 NKPRWIYSVSKQLLDRVIWAYG-EKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL--NLV--EGSPIKLIDGG  531 (660)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHH--HHH--HTCCEEEEGGG
T ss_pred             cCCCCCcHHHHHHHHHHHHHHH-HHcCCCEEEECCCcccCCCccccccccccccchHHHHHH--HHH--cCCCcEEeCCC
Confidence             12334664     55555443 44589999999999999543210       112222211  111  25566666777


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC-eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCH
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL  317 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~-~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  317 (396)
                      .+.+.++++.|+   |++++.++..+.  ..+++||+++++ .+|+.|+++.+.+.+|.+......         .+...
T Consensus       532 ~~~~~~i~v~Dv---a~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~---------p~~~~  599 (660)
T 1z7e_A          532 KQKRCFTDIRDG---IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHF---------PPFAG  599 (660)
T ss_dssp             CCEEECEEHHHH---HHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGS---------CCCCC
T ss_pred             CeEEEEEEHHHH---HHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCccccc---------Ccccc
Confidence            766777777665   777777776543  468999999986 899999999999999865322100         00000


Q ss_pred             HHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCCC
Q 016047          318 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFKI  394 (396)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~~  394 (396)
                         ..... .    ...++.   ....            .....+|++|+++ |||+|+++++++|+++++|+++...
T Consensus       600 ---~~~~~-~----~~~~~~---~~~~------------~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~  654 (660)
T 1z7e_A          600 ---FRVVE-S----SSYYGK---GYQD------------VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_dssp             ---EEEEC-T----HHHHCT---TCCC------------CSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred             ---ccchh-c----cccccc---cccc------------hhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence               00000 0    000010   0000            0134579999986 6999999999999999999988764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.96  E-value=7.1e-30  Score=254.09  Aligned_cols=287  Identities=13%  Similarity=0.068  Sum_probs=184.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      +|+|||||||||||++|+++|++     .||+|++++|++...       +.+.+|+.+.  +.+++.++|.|+|+|+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~-----~G~~V~~l~R~~~~~-------~~v~~d~~~~--~~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQT-----GGHEVIQLVRKEPKP-------GKRFWDPLNP--ASDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESSSCCT-------TCEECCTTSC--CTTTTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCCCCc-------cceeecccch--hHHhcCCCCEEEECCCCc
Confidence            47999999999999999999999     899999999986542       2367888754  356678899999998864


Q ss_pred             cCC---CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          105 WTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       105 ~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      ...   ..++...+++|+.|+.+|+++|.+. .++++++++||..+|+.      ..  ...+++|+.+. +  ...|+.
T Consensus       213 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~-~~~~r~V~~SS~~vyg~------~~--~~~~~~E~~~~-~--~~~y~~  280 (516)
T 3oh8_A          213 IFGRFNDSHKEAIRESRVLPTKFLAELVAES-TQCTTMISASAVGFYGH------DR--GDEILTEESES-G--DDFLAE  280 (516)
T ss_dssp             ----CCGGGHHHHHHHTHHHHHHHHHHHHHC-SSCCEEEEEEEGGGGCS------EE--EEEEECTTSCC-C--SSHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCcceEecC------CC--CCCccCCCCCC-C--cChHHH
Confidence            321   2356778899999999999984433 24788998887665541      10  13567787765 2  333553


Q ss_pred             -----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHH
Q 016047          182 -----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIA  256 (396)
Q Consensus       182 -----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la  256 (396)
                           |+++.. . ...|++++++||++|||  ++.  +....+   ....+ .+.. ...|++.+...++++.|+   |
T Consensus       281 ~~~~~E~~~~~-~-~~~gi~~~ilRp~~v~G--p~~--~~~~~~---~~~~~-~g~~-~~~g~g~~~~~~i~v~Dv---a  346 (516)
T 3oh8_A          281 VCRDWEHATAP-A-SDAGKRVAFIRTGVALS--GRG--GMLPLL---KTLFS-TGLG-GKFGDGTSWFSWIAIDDL---T  346 (516)
T ss_dssp             HHHHHHHTTHH-H-HHTTCEEEEEEECEEEB--TTB--SHHHHH---HHTTC----C-CCCTTSCCEECEEEHHHH---H
T ss_pred             HHHHHHHHHHH-H-HhCCCCEEEEEeeEEEC--CCC--ChHHHH---HHHHH-hCCC-cccCCCCceEceEeHHHH---H
Confidence                 333322 2 45789999999999999  442  122222   11111 1222 346777777777777665   7


Q ss_pred             HHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhC
Q 016047          257 EHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQ  336 (396)
Q Consensus       257 ~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (396)
                      ++++.++.++. .+++||++++..+|++|+++.+++.+|.+...               .++.+....         .++
T Consensus       347 ~ai~~~l~~~~-~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~---------------~~p~~~~~~---------~~g  401 (516)
T 3oh8_A          347 DIYYRAIVDAQ-ISGPINAVAPNPVSNADMTKILATSMHRPAFI---------------QIPSLGPKI---------LLG  401 (516)
T ss_dssp             HHHHHHHHCTT-CCEEEEESCSCCEEHHHHHHHTTC--------------------------------------------
T ss_pred             HHHHHHHhCcc-cCCcEEEECCCCCCHHHHHHHHHHHhCCCCCC---------------CCCHHHHHH---------HhC
Confidence            78777776644 45689999999999999999999999976421               111111110         000


Q ss_pred             CCcccccccccceeehhhhcCcccccchhhHhhcCCCcccc-CHHHHHHHHHH
Q 016047          337 LQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRN-SKNSFITWIDK  388 (396)
Q Consensus       337 l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~-~~~~~~~~~~~  388 (396)
                      -..  ..        +.  ...+...+.+|++++||+|+++ ++++|+++++.
T Consensus       402 ~~~--~~--------~~--~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~  442 (516)
T 3oh8_A          402 SQG--AE--------EL--ALASQRTAPAALENLSHTFRYTDIGAAIAHELGY  442 (516)
T ss_dssp             -CC--GG--------GG--GGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTC
T ss_pred             Cch--hH--------HH--hhcCCeechHHHHHCCCCCCCCCHHHHHHHHhCc
Confidence            000  00        00  0113446889999999999997 99999998864

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=7.6e-29  Score=241.28  Aligned_cols=312  Identities=13%  Similarity=0.033  Sum_probs=196.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------------C-------CCCCCeeEEEecCCChH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------------W-------NADHLVEYVQCDVSDPE   85 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~-------~~~~~v~~~~~Dl~d~~   85 (396)
                      .++|||||||||||++|+++|++     .|++|++++|++...            .       ....++.++.+|++|++
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQG-----YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTT-----TEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCEEEEecCCcHHHHHHHHHHHc-----CCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            47999999999999999999988     899999999987510            0       01257899999999988


Q ss_pred             HHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           86 ETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        86 ~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      ++. ++.++|.|+|+|+.... ..++...+++|+.|+.+++++|.+   +.++++++||..+ +.    +........++
T Consensus       144 ~l~-~~~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~-G~----~~~~~~~~~~~  213 (427)
T 4f6c_A          144 DVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-GT----YFDIDTEDVTF  213 (427)
T ss_dssp             CCC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGG-GS----EECSSCSCCEE
T ss_pred             cCC-CcCCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHh-CC----CccCCCCCccc
Confidence            777 67789999999875432 235677889999999999999998   3678888887654 21    11111235678


Q ss_pred             cCCCCCCCC-CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc--hhH-HHHHHHHHHhhhcCCCcee
Q 016047          166 TEDMPRLDA-PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM--NLV-GALCVYAAVCKHEGIPLRF  236 (396)
Q Consensus       166 ~E~~p~~~~-~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~-~~~~~~~~i~~~~~~~~~~  236 (396)
                      +|+++..+. +...|+.     |+++.++.  +.|++++++||++|||+.....+  +.. ..+..++.... .+.+++.
T Consensus       214 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  290 (427)
T 4f6c_A          214 SEADVYKGQLLTSPYTRSKFYSELKVLEAV--NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL-QLDCIGV  290 (427)
T ss_dssp             CTTCSCSSCCCCSHHHHHHHHHHHHHHHHH--HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHH-HSSEEEH
T ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHHH--HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHH-hcCCCCC
Confidence            888874322 3344765     55555532  36899999999999996433221  110 11111111111 1222222


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCC
Q 016047          237 PGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVK  316 (396)
Q Consensus       237 ~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~  316 (396)
                       +.+.+...++++.   ++|++++.++..+. .+++||++++..+++.|+++.+++ +|.                ..++
T Consensus       291 -~~~~~~~~~v~v~---DvA~ai~~~~~~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g~----------------~~~~  348 (427)
T 4f6c_A          291 -SMAEMPVDFSFVD---TTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKR-KEI----------------ELVS  348 (427)
T ss_dssp             -HHHTCEECCEEHH---HHHHHHHHHTTSCC-CCSEEEESCSCCEEHHHHHHHHHS-SCC----------------EEEC
T ss_pred             -ccccceEEEeeHH---HHHHHHHHHHcCCC-CCCEEEecCCCCCcHHHHHHHHHH-cCC----------------cccC
Confidence             2234444555554   45888888887655 889999999999999999999998 661                3355


Q ss_pred             HHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchh----hHhhcCCCccccCHHHHHHHHHHHhh
Q 016047          317 LAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMN----KSKEHGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       317 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~----k~~~lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                      .++|...        ....++.+  +..   +.. +.. ......+|.+    +++++||.+....++.++++++++++
T Consensus       349 ~~~~~~~--------l~~~~~~~--~~~---~~~-~~~-~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~  412 (427)
T 4f6c_A          349 DESFNEI--------LQKQDMYE--TIG---LTS-VDR-EQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT  412 (427)
T ss_dssp             HHHHHHH--------HHHTTCHH--HHH---HHH-HHH-TSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHH--------HHhcCchh--hhh---hhh-ccc-cCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            5565543        22222211  000   000 000 0002234444    44567999888888899999988865

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.96  E-value=8.5e-30  Score=240.38  Aligned_cols=298  Identities=16%  Similarity=0.125  Sum_probs=195.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--C------CCCCeeEE-EecCCChHHHHHHHhcC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N------ADHLVEYV-QCDVSDPEETQAKLSQL   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~------~~~~v~~~-~~Dl~d~~~~~~~~~~~   94 (396)
                      ++++|||||||||||++|+++|++     +|++|++++|+.....  .      ...+++++ .+|++|++++.++++++
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   84 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLE-----HGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA   84 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCC
Confidence            457999999999999999999999     8999999999753210  0      01468888 89999999998889999


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC---
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR---  171 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~---  171 (396)
                      |.|+|+|+..... .++...+++|+.|+.+++++|.+. .++++++++||..+|+...     ......+++|+++.   
T Consensus        85 d~vih~A~~~~~~-~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~~~~~~-----~~~~~~~~~E~~~~~~~  157 (342)
T 1y1p_A           85 AGVAHIASVVSFS-NKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPK-----PNVEGIYLDEKSWNLES  157 (342)
T ss_dssp             SEEEECCCCCSCC-SCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCC-----TTCCCCEECTTCCCHHH
T ss_pred             CEEEEeCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHHhcCCC-----CCCCCcccCccccCchh
Confidence            9999998754332 356778999999999999999853 2478899888655443210     00012466776521   


Q ss_pred             ----------CC-CCCcchhH-----HHHHHHHhhc-CCCeeEEEEcCCceeecCCCCcc--hhHHHHHHHHHHhhhcCC
Q 016047          172 ----------LD-APNFYYTL-----EDILFEEVEK-KEELSWSVHRPDTIFGFSPYSLM--NLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       172 ----------~~-~~~~~y~~-----e~~l~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~i~~~~~~  232 (396)
                                .+ .+...|+.     |+++..+..+ ..+++++++||+.|||+......  +....+..  .+.  .+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~--~~~--~~~  233 (342)
T 1y1p_A          158 IDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMM--SLF--NGE  233 (342)
T ss_dssp             HHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHH--HHH--TTC
T ss_pred             hhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHH--HHH--cCC
Confidence                      01 12234664     5555444311 23799999999999995422111  12222211  111  244


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCc
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGT  312 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~  312 (396)
                      ++.+.+.. +.+.++++.|+   |++++.++..+...|+.| ++++..+|+.|+++.+.+.+|.....  .         
T Consensus       234 ~~~~~~~~-~~~~~v~v~Dv---a~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~~~~--~---------  297 (342)
T 1y1p_A          234 VSPALALM-PPQYYVSAVDI---GLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSKTFP--A---------  297 (342)
T ss_dssp             CCHHHHTC-CSEEEEEHHHH---HHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTSCCC--C---------
T ss_pred             CccccccC-CcCCEeEHHHH---HHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCccCC--C---------
Confidence            43333333 34566666555   788777776544455544 45667899999999999999865111  0         


Q ss_pred             ccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCC---CccccCHHHHHHHHHH
Q 016047          313 QRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGF---SGFRNSKNSFITWIDK  388 (396)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~---~p~~~~~~~~~~~~~~  388 (396)
                       ..                      .+.. .              ....+|++|+++ +||   .+.++++++|+++++|
T Consensus       298 -~~----------------------~~~~-~--------------~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~  339 (342)
T 1y1p_A          298 -DF----------------------PDQG-Q--------------DLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS  339 (342)
T ss_dssp             -CC----------------------CCCC-C--------------CCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred             -CC----------------------Cccc-c--------------ccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHH
Confidence             00                      0000 0              023469999987 587   5788999999999998


Q ss_pred             Hhh
Q 016047          389 VKG  391 (396)
Q Consensus       389 ~~~  391 (396)
                      +++
T Consensus       340 ~~~  342 (342)
T 1y1p_A          340 ETA  342 (342)
T ss_dssp             SCC
T ss_pred             hhC
Confidence            763

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.96  E-value=7e-29  Score=246.76  Aligned_cols=311  Identities=14%  Similarity=0.043  Sum_probs=199.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------------------CCCCCCeeEEEecCCChH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------------WNADHLVEYVQCDVSDPE   85 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~~~~~~v~~~~~Dl~d~~   85 (396)
                      .++|||||||||||++|+++|++     .|++|++++|++...                   .....+++++.+|+.+++
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~-----~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  224 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQG-----YSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  224 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBT-----TEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCS
T ss_pred             CCeEEEECCccchHHHHHHHHHh-----cCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccc
Confidence            37999999999999999999988     899999999987510                   001258999999999987


Q ss_pred             HHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           86 ETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        86 ~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      .+. +..++|.|+|+|+.... ..++...+++|+.|+.+++++|.+   +.++++++||..+ +    .+........++
T Consensus       225 ~l~-~~~~~D~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~v-G----~~~~~~~~~~~~  294 (508)
T 4f6l_B          225 DVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISV-G----TYFDIDTEDVTF  294 (508)
T ss_dssp             SCC-CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCT-T----SEECTTCSCCEE
T ss_pred             cCC-CccCCCEEEECCceecC-CCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhh-c----cCCccCCcCccc
Confidence            776 67789999999875432 235667789999999999999987   3678888887654 2    121111235678


Q ss_pred             cCCCCCCCC-CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc--hh-HHHHHHHHHHhhhc-CCCce
Q 016047          166 TEDMPRLDA-PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM--NL-VGALCVYAAVCKHE-GIPLR  235 (396)
Q Consensus       166 ~E~~p~~~~-~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~-~~~~~~~~~i~~~~-~~~~~  235 (396)
                      +|+++..+. +...|+.     |+++.++.  +.|++++++||+.|||+..+..+  +. ...+..++  .... ...++
T Consensus       295 ~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~  370 (508)
T 4f6l_B          295 SEADVYKGQLLTSPYTRSKFYSELKVLEAV--NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVM--NDLLQLDCIG  370 (508)
T ss_dssp             CTTCSCSSBCCCSHHHHHHHHHHHHHHHHH--HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHH--HHHTTCSEEE
T ss_pred             ccccccccccCCCcHHHHHHHHHHHHHHHH--HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHH--HHHHHcCCCC
Confidence            888764322 3344664     55555543  36899999999999996543321  10 00111111  1111 22222


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccC
Q 016047          236 FPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRV  315 (396)
Q Consensus       236 ~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  315 (396)
                       .+.+.+...++++   +++|++++.++..+. .+++||++++..+|+.|+++.+++..      +           ..+
T Consensus       371 -~~~g~~~~~~v~v---~DvA~ai~~~~~~~~-~~~~~nl~~~~~~s~~el~~~i~~~~------~-----------~~~  428 (508)
T 4f6l_B          371 -VSMAEMPVDFSFV---DTTARQIVALAQVNT-PQIIYHVLSPNKMPVKSLLECVKRKE------I-----------ELV  428 (508)
T ss_dssp             -TTGGGSEEECEEH---HHHHHHHHHHTTBCC-SCSEEEESCSCEEEHHHHHHHHHSSC------C-----------EEE
T ss_pred             -CCccCceEEEEcH---HHHHHHHHHHHhCCC-CCCEEEeCCCCCCCHHHHHHHHHHcC------C-----------ccc
Confidence             2334444455554   555899998887655 78999999999999999999999854      1           345


Q ss_pred             CHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccch----hhHhhcCCCccccCHHHHHHHHHHHhh
Q 016047          316 KLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASM----NKSKEHGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~----~k~~~lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                      +.++|....        ...++.+  +   ..+...+ . ......+|.    ++++++||.+....++.+++.++++++
T Consensus       429 ~~~~w~~~l--------~~~~~~~--~---~~~~~~~-~-~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~  493 (508)
T 4f6l_B          429 SDESFNEIL--------QKQDMYE--T---IGLTSVD-R-EQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT  493 (508)
T ss_dssp             CHHHHHHHH--------HTTCCHH--H---HHHHHTG-G-GSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHH--------HhcCCcc--c---hhccccc-c-cCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence            566665432        2122111  0   0000000 0 000223444    445677999888889999999998875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.96  E-value=5.6e-28  Score=220.79  Aligned_cols=226  Identities=15%  Similarity=0.078  Sum_probs=162.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEEe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFYV  103 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~~  103 (396)
                      |+|||||||||||++++++|++      |++|++++|++...    .+   +.+|++|++++.+++++  +|.|+|+|+.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~------g~~V~~~~r~~~~~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~   67 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE------RHEVIKVYNSSEIQ----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAM   67 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT------TSCEEEEESSSCCT----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc------CCeEEEecCCCcCC----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcc
Confidence            3799999999999999999986      58999999986432    23   88999999999999987  8999999874


Q ss_pred             ccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          104 TWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       104 ~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      ....  ..++...+++|+.++.+++++|++.+  . +++++||..+|       +..   ..+++|+++..|.  ..|+.
T Consensus        68 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~iv~~SS~~~~-------~~~---~~~~~e~~~~~~~--~~Y~~  132 (273)
T 2ggs_A           68 TDVDKCEIEKEKAYKINAEAVRHIVRAGKVID--S-YIVHISTDYVF-------DGE---KGNYKEEDIPNPI--NYYGL  132 (273)
T ss_dssp             CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--C-EEEEEEEGGGS-------CSS---SCSBCTTSCCCCS--SHHHH
T ss_pred             cChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC--C-eEEEEecceeE-------cCC---CCCcCCCCCCCCC--CHHHH
Confidence            3221  12567788999999999999998864  3 67777765544       321   3367888775543  34888


Q ss_pred             HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 016047          182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  261 (396)
Q Consensus       182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~  261 (396)
                      .|...+.+.+.  ++++++||+.|||  +..   +...+..  .+.  .+.++...++   ...+++   ++++|++++.
T Consensus       133 sK~~~e~~~~~--~~~~~iR~~~v~G--~~~---~~~~~~~--~~~--~~~~~~~~~~---~~~~~~---~~dva~~i~~  195 (273)
T 2ggs_A          133 SKLLGETFALQ--DDSLIIRTSGIFR--NKG---FPIYVYK--TLK--EGKTVFAFKG---YYSPIS---ARKLASAILE  195 (273)
T ss_dssp             HHHHHHHHHCC--TTCEEEEECCCBS--SSS---HHHHHHH--HHH--TTCCEEEESC---EECCCB---HHHHHHHHHH
T ss_pred             HHHHHHHHHhC--CCeEEEecccccc--ccH---HHHHHHH--HHH--cCCCEEeecC---CCCceE---HHHHHHHHHH
Confidence            77777665344  8899999999998  322   2111111  111  2444444443   334444   4455778777


Q ss_pred             HhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCC
Q 016047          262 AAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  299 (396)
Q Consensus       262 ~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~  299 (396)
                      ++..+.  +++||+++ ..+|++|+++.+.+.+|.+..
T Consensus       196 ~~~~~~--~g~~~i~~-~~~s~~e~~~~~~~~~g~~~~  230 (273)
T 2ggs_A          196 LLELRK--TGIIHVAG-ERISRFELALKIKEKFNLPGE  230 (273)
T ss_dssp             HHHHTC--CEEEECCC-CCEEHHHHHHHHHHHTTCCSC
T ss_pred             HHhcCc--CCeEEECC-CcccHHHHHHHHHHHhCCChh
Confidence            775432  56999999 999999999999999997753

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.5e-27  Score=235.16  Aligned_cols=333  Identities=16%  Similarity=0.069  Sum_probs=205.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC---CcEEEEEeCCCCCC---------CC-------------CCCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG---PWKVYGVARRPKPN---------WN-------------ADHLVEYVQ   78 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~---g~~V~~l~R~~~~~---------~~-------------~~~~v~~~~   78 (396)
                      .+|+|||||||||||++|+++|++     .   |++|++++|+....         ..             ...+++++.
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~-----~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLR-----RLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA  146 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHH-----HSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-----cCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence            458999999999999999999998     5   89999999976421         00             015899999


Q ss_pred             ecCC------ChHHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccc
Q 016047           79 CDVS------DPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPF  152 (396)
Q Consensus        79 ~Dl~------d~~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~  152 (396)
                      +|++      |.+.+.++++++|.|+|+|+....  .++.+.+++|+.|+.+++++|++.+  +++|+++||..+|    
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~--~~~~V~iSS~~v~----  218 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTK--LKPFTYVSTADVG----  218 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSS--CCCEEEEEEGGGG----
T ss_pred             eECCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCC--CCeEEEEeehhhc----
Confidence            9998      667899999999999999886443  4556778999999999999999864  6788888865544    


Q ss_pred             cccccCCCCCCCccCCCCCCCCCC---------cchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCC-CCcchhH
Q 016047          153 EAFGKIKPYDPPFTEDMPRLDAPN---------FYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSP-YSLMNLV  217 (396)
Q Consensus       153 ~~~g~~~~~~~p~~E~~p~~~~~~---------~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~-~~~~~~~  217 (396)
                         +..  ...+++|+.+..|...         ..|+.     |+++.++. +..+++++++||++|||++. ....+..
T Consensus       219 ---~~~--~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~gi~~~ivRpg~v~G~~~~~g~~~~~  292 (478)
T 4dqv_A          219 ---AAI--EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREAN-DLCALPVAVFRCGMILADTSYAGQLNMS  292 (478)
T ss_dssp             ---TTS--CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEECCSSSSSCCCTT
T ss_pred             ---Ccc--CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHH-HHhCCCeEEEECceeeCCCccCCcCCHH
Confidence               321  2456677765432211         23665     55555543 34589999999999999643 1222221


Q ss_pred             HHHHHHHHHhhhcCC-CceecC---Cc---cccceeeecccHHHHHHHHHHHhcC----CCCCCceeeecCCCe--eeHH
Q 016047          218 GALCVYAAVCKHEGI-PLRFPG---TK---AAWECYSIASDADLIAEHQIWAAVD----PYAKNEAFNCNNGDV--FKWK  284 (396)
Q Consensus       218 ~~~~~~~~i~~~~~~-~~~~~g---~~---~~~~~~~~~~da~~la~~~i~~~~~----~~~~g~~~ni~~~~~--~s~~  284 (396)
                      ..+..++......+. |..+++   ++   .+...++++.|   +|++++.++..    +...+++||++++..  +|+.
T Consensus       293 ~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdD---vA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~  369 (478)
T 4dqv_A          293 DWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTF---VAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLD  369 (478)
T ss_dssp             BHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHH---HHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHH
T ss_pred             HHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHH---HHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHH
Confidence            122111211112232 212221   11   33345555544   58888777655    456789999999887  9999


Q ss_pred             HHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHH---HHHHHhCCCccccccc----ccceeehhhhc-
Q 016047          285 HLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWE---EIVRENQLQPTRLDEV----GAWWFVDLVLT-  356 (396)
Q Consensus       285 el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~----~~~~~~~~~~~-  356 (396)
                      |+++.+++. |.+..             ...++++|+........   .......+-+ -+...    ..|  ..-... 
T Consensus       370 el~~~l~~~-g~~~~-------------~i~~~~~w~~~l~~~~~~~~~~~~~~~llp-ll~~~~~~~~~~--~~~~~~~  432 (478)
T 4dqv_A          370 EYVDWLIEA-GYPIR-------------RIDDFAEWLQRFEASLGALPDRQRRHSVLP-MLLASNSQRLQP--LKPTRGC  432 (478)
T ss_dssp             HHHHHHHHT-TCSCE-------------EESSHHHHHHHHHHHHHTSCHHHHHTSSST-TCC--CCCBCC--------CC
T ss_pred             HHHHHHHHc-CCCcc-------------cCCCHHHHHHHHHHHhccCccccccCcchh-HHHHhhccCCCC--CcccccC
Confidence            999999984 65532             22367778765432211   0011111110 00000    111  000000 


Q ss_pred             -CcccccchhhHh-hcCCCc-----cccCHHHHHHHHHHHhhCCCC
Q 016047          357 -GEAKLASMNKSK-EHGFSG-----FRNSKNSFITWIDKVKGFKIV  395 (396)
Q Consensus       357 -~~~~~~d~~k~~-~lG~~p-----~~~~~~~~~~~~~~~~~~~~~  395 (396)
                       .....+.....+ +.|-..     .+...+.+.++++.++..|++
T Consensus       433 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  478 (478)
T 4dqv_A          433 SAPTDRFRAAVRAAKVGSDKDNPDIPHVSAPTIINYVTNLQLLGLL  478 (478)
T ss_dssp             SSCCHHHHHHHHHTTCSSCSSSCCCCCCCHHHHHHHHHHHHHTTCC
T ss_pred             cchHHHHHHHHHHhccCCCcCcccCCCCCHHHHHHHHHHHHhhcCC
Confidence             001112233333 247653     456889999999999988875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.96  E-value=1.5e-28  Score=226.35  Aligned_cols=282  Identities=13%  Similarity=0.085  Sum_probs=185.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      |+|||||||||||++|+++|++     +  |++|++++|++.... ....+++++.+|+.|++++.++++++|.|+|+|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLK-----KVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTT-----TSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHH-----hCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            4799999999999999999998     7  999999999764321 0124788999999999999999999999999976


Q ss_pred             eccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHH
Q 016047          103 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE  182 (396)
Q Consensus       103 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e  182 (396)
                      ..   ..     .++|+.++.+++++|++.+  +++++++||..+|       .            .|      ..|+..
T Consensus        76 ~~---~~-----~~~n~~~~~~l~~a~~~~~--~~~~v~~Ss~~~~-------~------------~~------~~y~~~  120 (287)
T 2jl1_A           76 PH---YD-----NTLLIVQHANVVKAARDAG--VKHIAYTGYAFAE-------E------------SI------IPLAHV  120 (287)
T ss_dssp             CC---SC-----HHHHHHHHHHHHHHHHHTT--CSEEEEEEETTGG-------G------------CC------STHHHH
T ss_pred             CC---cC-----chHHHHHHHHHHHHHHHcC--CCEEEEECCCCCC-------C------------CC------CchHHH
Confidence            31   11     1679999999999999864  6788887753221       1            01      127766


Q ss_pred             HHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHH
Q 016047          183 DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWA  262 (396)
Q Consensus       183 ~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~  262 (396)
                      |...+.+.++.+++++++||+.++|+..   ..+....     +..  +.. .. +.+.+...++++   +++|++++.+
T Consensus       121 K~~~E~~~~~~~~~~~ilrp~~~~~~~~---~~~~~~~-----~~~--~~~-~~-~~~~~~~~~i~~---~Dva~~~~~~  185 (287)
T 2jl1_A          121 HLATEYAIRTTNIPYTFLRNALYTDFFV---NEGLRAS-----TES--GAI-VT-NAGSGIVNSVTR---NELALAAATV  185 (287)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCBHHHHS---SGGGHHH-----HHH--TEE-EE-SCTTCCBCCBCH---HHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCeEEEECCEeccccc---hhhHHHH-----hhC--Cce-ec-cCCCCccCccCH---HHHHHHHHHH
Confidence            6555444355789999999998888321   1111111     111  222 22 223334445554   4458888887


Q ss_pred             hcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccc
Q 016047          263 AVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRL  342 (396)
Q Consensus       263 ~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  342 (396)
                      +.++...+++||++++..+|++|+++.+.+.+|.+...            .+++...+...        ....+++....
T Consensus       186 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~------------~~~~~~~~~~~--------~~~~~~~~~~~  245 (287)
T 2jl1_A          186 LTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVH------------QPVSFEEEKNF--------LVNAGVPEPFT  245 (287)
T ss_dssp             HTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEE------------EECCHHHHHHH--------HHHTTCCHHHH
T ss_pred             hcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcceE------------EeCCHHHHHHH--------HHhCCCCHHHH
Confidence            76655678899999999999999999999999987542            23343332211        11111111000


Q ss_pred             cccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHH
Q 016047          343 DEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWID  387 (396)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~  387 (396)
                      ..+..  +.. .+......+|++|+++ +|  |.++++|+|+++++
T Consensus       246 ~~~~~--~~~-~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          246 EITAA--IYD-AISKGEASKTSDDLQKLIG--SLTPLKETVKQALK  286 (287)
T ss_dssp             HHHHH--HHH-HHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred             HHHHH--HHH-HHhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence            00000  000 0011134578999987 69  89999999999875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.95  E-value=8.4e-28  Score=213.63  Aligned_cols=218  Identities=14%  Similarity=0.112  Sum_probs=154.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  105 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~  105 (396)
                      |+|||||||||||++|+++|++     +|++|++++|++........+++++.+|++|++++.++++++|.|+|+|+...
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~   79 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALN-----RGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGW   79 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHT-----TTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC--
T ss_pred             CEEEEEcCCchHHHHHHHHHHH-----CCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCC
Confidence            6999999999999999999999     89999999998754322236899999999999999999999999999976431


Q ss_pred             CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHH
Q 016047          106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL  185 (396)
Q Consensus       106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l  185 (396)
                         . ....+++|+.++.+++++|++.+  +++++++||..+|...          .....|+.+..|.  ..|+..|..
T Consensus        80 ---~-~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~----------~~~~~~~~~~~p~--~~Y~~sK~~  141 (227)
T 3dhn_A           80 ---N-NPDIYDETIKVYLTIIDGVKKAG--VNRFLMVGGAGSLFIA----------PGLRLMDSGEVPE--NILPGVKAL  141 (227)
T ss_dssp             --------CCSHHHHHHHHHHHHHHHTT--CSEEEEECCSTTSEEE----------TTEEGGGTTCSCG--GGHHHHHHH
T ss_pred             ---C-ChhHHHHHHHHHHHHHHHHHHhC--CCEEEEeCChhhccCC----------CCCccccCCcchH--HHHHHHHHH
Confidence               2 22378899999999999999874  6789988865544221          1223445554443  347754444


Q ss_pred             HH----HhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 016047          186 FE----EVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  261 (396)
Q Consensus       186 ~~----~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~  261 (396)
                      .+    .+.++.+++++++||+.+||+....  ..   +      ......+ ...+++   +.++++.|   +|++++.
T Consensus       142 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~---~------~~~~~~~-~~~~~~---~~~i~~~D---va~ai~~  203 (227)
T 3dhn_A          142 GEFYLNFLMKEKEIDWVFFSPAADMRPGVRT--GR---Y------RLGKDDM-IVDIVG---NSHISVED---YAAAMID  203 (227)
T ss_dssp             HHHHHHTGGGCCSSEEEEEECCSEEESCCCC--CC---C------EEESSBC-CCCTTS---CCEEEHHH---HHHHHHH
T ss_pred             HHHHHHHHhhccCccEEEEeCCcccCCCccc--cc---e------eecCCCc-ccCCCC---CcEEeHHH---HHHHHHH
Confidence            33    2334789999999999999954321  11   0      1111111 223333   35555555   4888898


Q ss_pred             HhcCCCCCCceeeecCCCeeeHH
Q 016047          262 AAVDPYAKNEAFNCNNGDVFKWK  284 (396)
Q Consensus       262 ~~~~~~~~g~~~ni~~~~~~s~~  284 (396)
                      ++.++...|++||++++++.+|.
T Consensus       204 ~l~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          204 ELEHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             HHHSCCCCSEEEEEECCSCCC--
T ss_pred             HHhCccccCcEEEEEeehhcccC
Confidence            88888889999999999988875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.95  E-value=1e-27  Score=220.55  Aligned_cols=282  Identities=14%  Similarity=0.090  Sum_probs=177.4

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEe
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  103 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~  103 (396)
                      +|||||||||||++|+++|++     +  |++|++++|++.... ....+++++.+|++|++++.++++++|.|+|+++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMK-----TVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTT-----TSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHh-----hCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            589999999999999999998     6  999999999865321 01246889999999999999999999999999763


Q ss_pred             ccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHH
Q 016047          104 TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED  183 (396)
Q Consensus       104 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~  183 (396)
                      .          .+.|+.++++++++|++.+  +++++++||..+|       .            .|      ..|+..|
T Consensus        76 ~----------~~~~~~~~~~l~~a~~~~~--~~~~v~~Ss~~~~-------~------------~~------~~y~~sK  118 (286)
T 2zcu_A           76 E----------VGQRAPQHRNVINAAKAAG--VKFIAYTSLLHAD-------T------------SP------LGLADEH  118 (286)
T ss_dssp             ----------------CHHHHHHHHHHHHT--CCEEEEEEETTTT-------T------------CC------STTHHHH
T ss_pred             C----------chHHHHHHHHHHHHHHHcC--CCEEEEECCCCCC-------C------------Cc------chhHHHH
Confidence            1          1258899999999999864  7788887743221       0            01      1266544


Q ss_pred             HHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 016047          184 ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA  263 (396)
Q Consensus       184 ~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~  263 (396)
                      ...+...++.+++++++||+.++|..    ..+....      .+ .+ ++.+ +.+.+...++++.|   +|++++.++
T Consensus       119 ~~~e~~~~~~~~~~~ilrp~~~~~~~----~~~~~~~------~~-~~-~~~~-~~~~~~~~~i~~~D---va~~~~~~~  182 (286)
T 2zcu_A          119 IETEKMLADSGIVYTLLRNGWYSENY----LASAPAA------LE-HG-VFIG-AAGDGKIASATRAD---YAAAAARVI  182 (286)
T ss_dssp             HHHHHHHHHHCSEEEEEEECCBHHHH----HTTHHHH------HH-HT-EEEE-SCTTCCBCCBCHHH---HHHHHHHHH
T ss_pred             HHHHHHHHHcCCCeEEEeChHHhhhh----HHHhHHh------hc-CC-ceec-cCCCCccccccHHH---HHHHHHHHh
Confidence            44443324468999999998766521    1111111      11 12 2232 33344445555544   588888777


Q ss_pred             cCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCccccc
Q 016047          264 VDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLD  343 (396)
Q Consensus       264 ~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  343 (396)
                      .++...+++||++++..+|++|+++.+.+.+|.+...            .+++...+...        ....++......
T Consensus       183 ~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~------------~~~~~~~~~~~--------~~~~~~~~~~~~  242 (286)
T 2zcu_A          183 SEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTY------------QNLSEADFAAA--------LKSVGLPDGLAD  242 (286)
T ss_dssp             HSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEE------------EECCHHHHHHH--------HTTSSCCHHHHH
T ss_pred             cCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCce------------eeCCHHHHHHH--------HHHcCCCHHHHH
Confidence            7655678999999988999999999999999987532            23443332210        000011000000


Q ss_pred             ccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHh
Q 016047          344 EVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  390 (396)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~  390 (396)
                      ....  +... +......+|.+|+++ +|| |.++++|+|+++++||.
T Consensus       243 ~~~~--~~~~-~~~~~~~~~~~~~~~~lg~-~~~~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          243 MLAD--SDVG-ASKGGLFDDSKTLSKLIGH-PTTTLAESVSHLFNVNN  286 (286)
T ss_dssp             HHHH--HHHH-HHTTTTCCCCCHHHHHHTS-CCCCHHHHHHGGGC---
T ss_pred             HHHH--HHHH-HhCCCCccCchHHHHHhCc-CCCCHHHHHHHHHhhcC
Confidence            0000  0000 011134568999987 697 68899999999998873

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.94  E-value=2.8e-27  Score=223.89  Aligned_cols=227  Identities=13%  Similarity=0.086  Sum_probs=164.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHh--cC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--QL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~--~~   94 (396)
                      +++|||||||||||++|+++|++     .|++|++++|++....        ....+++++.+|+.|++++.++++  ++
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~-----~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~   84 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLD-----AHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEI   84 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHH-----TTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHH-----CCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence            36899999999999999999998     7899999999863210        012578999999999999999999  99


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      |.|+|+++.             .|+.++.+++++|++.+ .+++|++ |          .||.      +.+|+.+..|.
T Consensus        85 d~Vi~~a~~-------------~n~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~------~~~e~~~~~p~  133 (346)
T 3i6i_A           85 DIVVSTVGG-------------ESILDQIALVKAMKAVG-TIKRFLP-S----------EFGH------DVNRADPVEPG  133 (346)
T ss_dssp             CEEEECCCG-------------GGGGGHHHHHHHHHHHC-CCSEEEC-S----------CCSS------CTTTCCCCTTH
T ss_pred             CEEEECCch-------------hhHHHHHHHHHHHHHcC-CceEEee-c----------ccCC------CCCccCcCCCc
Confidence            999999763             38889999999999874 3777773 2          4442      23444443332


Q ss_pred             CCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 016047          175 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  254 (396)
Q Consensus       175 ~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  254 (396)
                        ..|...|...+.+.++.+++++++||+.++|........   ..     ........+.++|++.+...++++.|+  
T Consensus       134 --~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~---~~-----~~~~~~~~~~~~g~g~~~~~~i~~~Dv--  201 (346)
T 3i6i_A          134 --LNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIH---PS-----EVLPPTDFFQIYGDGNVKAYFVAGTDI--  201 (346)
T ss_dssp             --HHHHHHHHHHHHHHHHTTCCBEEEECCEESSCCCSCC-------------CCCCSSCEEEETTSCCCEEEECHHHH--
T ss_pred             --chHHHHHHHHHHHHHHcCCCEEEEEecccccccCccccc---cc-----cccCCCceEEEccCCCceEEecCHHHH--
Confidence              236555544443335678999999999999943211111   00     011123345677877766677766555  


Q ss_pred             HHHHHHHHhcCCCCCCceeeecC-CCeeeHHHHHHHHHHHhCCCCCC
Q 016047          255 IAEHQIWAAVDPYAKNEAFNCNN-GDVFKWKHLWKVLAEQFGIEDYG  300 (396)
Q Consensus       255 la~~~i~~~~~~~~~g~~~ni~~-~~~~s~~el~~~l~~~~g~~~~~  300 (396)
                       |++++.++.++...+++||+++ ++.+|+.|+++.+.+.+|.+...
T Consensus       202 -a~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~  247 (346)
T 3i6i_A          202 -GKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPR  247 (346)
T ss_dssp             -HHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCE
T ss_pred             -HHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCce
Confidence             8888888877666788999985 57899999999999999987543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.94  E-value=1.3e-26  Score=211.23  Aligned_cols=162  Identities=17%  Similarity=0.117  Sum_probs=127.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  103 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~  103 (396)
                      |.|+|||||||||||++|+++|++     .|++|++++|++....  ..+++++.+|++|++++.++++++|.|+|+|+.
T Consensus         1 M~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   73 (267)
T 3ay3_A            1 MLNRLLVTGAAGGVGSAIRPHLGT-----LAHEVRLSDIVDLGAA--EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV   73 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHGGGGGG-----TEEEEEECCSSCCCCC--CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CCceEEEECCCCHHHHHHHHHHHh-----CCCEEEEEeCCCcccc--CCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence            447899999999999999999999     7999999999875432  247889999999999999999999999999874


Q ss_pred             ccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH--
Q 016047          104 TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--  181 (396)
Q Consensus       104 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~--  181 (396)
                      .  ...+....+++|+.++.+++++|++.+  +++++++||..+|+       .. +...+++|++|..|...  |+.  
T Consensus        74 ~--~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~~~-------~~-~~~~~~~E~~~~~~~~~--Y~~sK  139 (267)
T 3ay3_A           74 S--VERPWNDILQANIIGAYNLYEAARNLG--KPRIVFASSNHTIG-------YY-PRTTRIDTEVPRRPDSL--YGLSK  139 (267)
T ss_dssp             C--SCCCHHHHHHHTHHHHHHHHHHHHHTT--CCEEEEEEEGGGST-------TS-BTTSCBCTTSCCCCCSH--HHHHH
T ss_pred             C--CCCCHHHHHHHHHHHHHHHHHHHHHhC--CCEEEEeCCHHHhC-------CC-CCCCCCCCCCCCCCCCh--HHHHH
Confidence            3  233567788999999999999998764  67888888665553       21 12457888887665433  654  


Q ss_pred             ---HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          182 ---EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       182 ---e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                         |.++..+. +..+++++++||+.+|+
T Consensus       140 ~~~e~~~~~~~-~~~gi~~~~lrp~~v~~  167 (267)
T 3ay3_A          140 CFGEDLASLYY-HKFDIETLNIRIGSCFP  167 (267)
T ss_dssp             HHHHHHHHHHH-HTTCCCEEEEEECBCSS
T ss_pred             HHHHHHHHHHH-HHcCCCEEEEeceeecC
Confidence               55555443 56789999999999995

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=4.7e-26  Score=201.28  Aligned_cols=208  Identities=16%  Similarity=0.147  Sum_probs=152.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCC-hHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD-PEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |+|||||||||||++++++|++     +|++|++++|++.... ...+++++.+|++| ++++.++++++|.|+|+|+..
T Consensus         1 M~ilItGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~   74 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLST-----TDYQIYAGARKVEQVP-QYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG   74 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTT-----SSCEEEEEESSGGGSC-CCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred             CeEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCccchh-hcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence            4899999999999999999999     8999999999875432 12689999999999 999999999999999997743


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  184 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~  184 (396)
                      .      ...+++|+.++.+++++|++.+  +++++++||...       ++     ..+..| .+..  +...|+..|.
T Consensus        75 ~------~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~-------~~-----~~~~~e-~~~~--~~~~Y~~sK~  131 (219)
T 3dqp_A           75 G------KSLLKVDLYGAVKLMQAAEKAE--VKRFILLSTIFS-------LQ-----PEKWIG-AGFD--ALKDYYIAKH  131 (219)
T ss_dssp             T------SSCCCCCCHHHHHHHHHHHHTT--CCEEEEECCTTT-------TC-----GGGCCS-HHHH--HTHHHHHHHH
T ss_pred             C------CCcEeEeHHHHHHHHHHHHHhC--CCEEEEECcccc-------cC-----CCcccc-cccc--cccHHHHHHH
Confidence            2      2267899999999999998864  678888876322       22     123333 2211  2334776655


Q ss_pred             HHHHhh-cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 016047          185 LFEEVE-KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA  263 (396)
Q Consensus       185 l~~~~~-~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~  263 (396)
                      ..+... +..+++++++||+.+||+......                    .+ +  .....++++.|   +|++++.++
T Consensus       132 ~~e~~~~~~~~i~~~ilrp~~v~g~~~~~~~--------------------~~-~--~~~~~~i~~~D---va~~i~~~l  185 (219)
T 3dqp_A          132 FADLYLTKETNLDYTIIQPGALTEEEATGLI--------------------DI-N--DEVSASNTIGD---VADTIKELV  185 (219)
T ss_dssp             HHHHHHHHSCCCEEEEEEECSEECSCCCSEE--------------------EE-S--SSCCCCEEHHH---HHHHHHHHH
T ss_pred             HHHHHHHhccCCcEEEEeCceEecCCCCCcc--------------------cc-C--CCcCCcccHHH---HHHHHHHHH
Confidence            555544 578999999999999994221110                    11 1  22234555544   488888888


Q ss_pred             cCCCCCCceeeecCCCeeeHHHHHHH
Q 016047          264 VDPYAKNEAFNCNNGDVFKWKHLWKV  289 (396)
Q Consensus       264 ~~~~~~g~~~ni~~~~~~s~~el~~~  289 (396)
                      .++...+++||++++. .+++|+++.
T Consensus       186 ~~~~~~g~~~~i~~g~-~~~~e~~~~  210 (219)
T 3dqp_A          186 MTDHSIGKVISMHNGK-TAIKEALES  210 (219)
T ss_dssp             TCGGGTTEEEEEEECS-EEHHHHHHT
T ss_pred             hCccccCcEEEeCCCC-ccHHHHHHH
Confidence            7766678999998764 899987654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.92  E-value=8.4e-25  Score=201.50  Aligned_cols=230  Identities=15%  Similarity=0.084  Sum_probs=160.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  103 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~  103 (396)
                      |+|||||||||||++++++|++     . |++|++++|++.... ....+++++.+|+.|++++.++++++|.|+|+++.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~-----~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIA-----NHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHH-----TTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhh-----CCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            4799999999999999999987     5 899999999875421 12358999999999999999999999999999763


Q ss_pred             ccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHH
Q 016047          104 TWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED  183 (396)
Q Consensus       104 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~  183 (396)
                      ..   .     ...|+.++++++++|++.+  +++++++||          +|.        .+..|. +...  +  ..
T Consensus        76 ~~---~-----~~~~~~~~~~l~~aa~~~g--v~~iv~~Ss----------~~~--------~~~~~~-~~~~--~--~~  122 (289)
T 3e48_A           76 IH---P-----SFKRIPEVENLVYAAKQSG--VAHIIFIGY----------YAD--------QHNNPF-HMSP--Y--FG  122 (289)
T ss_dssp             CC---S-----HHHHHHHHHHHHHHHHHTT--CCEEEEEEE----------SCC--------STTCCS-TTHH--H--HH
T ss_pred             Cc---c-----chhhHHHHHHHHHHHHHcC--CCEEEEEcc----------cCC--------CCCCCC-ccch--h--HH
Confidence            21   1     2458999999999999875  788888874          221        011111 1001  1  11


Q ss_pred             HHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 016047          184 ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA  263 (396)
Q Consensus       184 ~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~  263 (396)
                      .+++.. +..+++++++||+.++|+    .   ...+.   .+... +.  ...+.+.+...++++.|   +|++++.++
T Consensus       123 ~~e~~~-~~~g~~~~ilrp~~~~~~----~---~~~~~---~~~~~-~~--~~~~~g~~~~~~i~~~D---va~~~~~~l  185 (289)
T 3e48_A          123 YASRLL-STSGIDYTYVRMAMYMDP----L---KPYLP---ELMNM-HK--LIYPAGDGRINYITRND---IARGVIAII  185 (289)
T ss_dssp             HHHHHH-HHHCCEEEEEEECEESTT----H---HHHHH---HHHHH-TE--ECCCCTTCEEEEECHHH---HHHHHHHHH
T ss_pred             HHHHHH-HHcCCCEEEEeccccccc----c---HHHHH---HHHHC-CC--EecCCCCceeeeEEHHH---HHHHHHHHH
Confidence            222333 345899999999999993    1   11111   11111 21  12233444455555555   588888887


Q ss_pred             cCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhcc
Q 016047          264 VDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKG  323 (396)
Q Consensus       264 ~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (396)
                      .++...+++||++ +..+|+.|+++.+++.+|.+...            .+++..+|...
T Consensus       186 ~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~------------~~~~~~~~~~~  232 (289)
T 3e48_A          186 KNPDTWGKRYLLS-GYSYDMKELAAILSEASGTEIKY------------EPVSLETFAEM  232 (289)
T ss_dssp             HCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEE------------CCCCHHHHHHH
T ss_pred             cCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCceeE------------EeCCHHHHHHH
Confidence            7766668999999 99999999999999999987543            45677776654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.92  E-value=2.6e-25  Score=198.77  Aligned_cols=217  Identities=11%  Similarity=0.057  Sum_probs=153.3

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCe-eEEEecCCChHHHHHHHhcCCCee
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLV-EYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v-~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ...++|+||||||||+||++|+++|++     +|++|++++|++.... ....++ +++.+|++  +++.+++.++|.|+
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi   89 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKN-----KGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVV   89 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEE
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHh-----CCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEE
Confidence            344578999999999999999999999     8999999999865321 012378 99999999  66778889999999


Q ss_pred             EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcc
Q 016047           99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  178 (396)
Q Consensus        99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~  178 (396)
                      |+|+..  ...++...+++|+.++.+++++|++.+  +++++++||...+       .         .+..+   .+...
T Consensus        90 ~~ag~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~~-------~---------~~~~~---~~~~~  146 (236)
T 3e8x_A           90 FAAGSG--PHTGADKTILIDLWGAIKTIQEAEKRG--IKRFIMVSSVGTV-------D---------PDQGP---MNMRH  146 (236)
T ss_dssp             ECCCCC--TTSCHHHHHHTTTHHHHHHHHHHHHHT--CCEEEEECCTTCS-------C---------GGGSC---GGGHH
T ss_pred             ECCCCC--CCCCccccchhhHHHHHHHHHHHHHcC--CCEEEEEecCCCC-------C---------CCCCh---hhhhh
Confidence            998743  234678889999999999999998864  7789988752111       1         11111   12334


Q ss_pred             hhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHH
Q 016047          179 YTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEH  258 (396)
Q Consensus       179 y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~  258 (396)
                      |...|...+.+.+..+++++++||+.++|+......                    ...........++++   +++|++
T Consensus       147 Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~~~~--------------------~~~~~~~~~~~~i~~---~Dva~~  203 (236)
T 3e8x_A          147 YLVAKRLADDELKRSSLDYTIVRPGPLSNEESTGKV--------------------TVSPHFSEITRSITR---HDVAKV  203 (236)
T ss_dssp             HHHHHHHHHHHHHHSSSEEEEEEECSEECSCCCSEE--------------------EEESSCSCCCCCEEH---HHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCCCeE--------------------EeccCCCcccCcEeH---HHHHHH
Confidence            776665555444678999999999999994321110                    111112222344554   445888


Q ss_pred             HHHHhcCCCCCCceeeecCCCeeeHHHHHHHHH
Q 016047          259 QIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLA  291 (396)
Q Consensus       259 ~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~  291 (396)
                      ++.++.++...+++||++++ ..+++|+++.++
T Consensus       204 ~~~~~~~~~~~g~~~~v~~~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          204 IAELVDQQHTIGKTFEVLNG-DTPIAKVVEQLG  235 (236)
T ss_dssp             HHHHTTCGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred             HHHHhcCccccCCeEEEeCC-CcCHHHHHHHhc
Confidence            88888776677899999887 599999998765

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.91  E-value=5.3e-25  Score=194.47  Aligned_cols=216  Identities=15%  Similarity=0.136  Sum_probs=129.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  105 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~  105 (396)
                      |+|||||||||||++|+++|++     +|++|++++|++.......++++++.+|++|+++  +++.++|.|+|+|+...
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~   73 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKN-----RGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLSDQNVVVDAYGISP   73 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHTTCSEEEECCCSST
T ss_pred             CeEEEEcCCchhHHHHHHHHHh-----CCCEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhcCCCEEEECCcCCc
Confidence            4799999999999999999999     8999999999864321001578999999999987  78899999999977521


Q ss_pred             CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHH
Q 016047          106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL  185 (396)
Q Consensus       106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l  185 (396)
                             ...+.|+.++++++++|++.+  ..+++++||...|.      +.  +...+..|+.+..|...  |+..|..
T Consensus        74 -------~~~~~~~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~------~~--~~~~~~~~~~~~~~~~~--y~~~k~~  134 (221)
T 3ew7_A           74 -------DEAEKHVTSLDHLISVLNGTV--SPRLLVVGGAASLQ------ID--EDGNTLLESKGLREAPY--YPTARAQ  134 (221)
T ss_dssp             -------TTTTSHHHHHHHHHHHHCSCC--SSEEEEECCCC---------------------------CCC--SCCHHHH
T ss_pred             -------cccchHHHHHHHHHHHHHhcC--CceEEEEecceEEE------cC--CCCccccccCCCCCHHH--HHHHHHH
Confidence                   125679999999999999864  67888777654332      21  11224556655544433  4322221


Q ss_pred             H---HHhhc-CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 016047          186 F---EEVEK-KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  261 (396)
Q Consensus       186 ~---~~~~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~  261 (396)
                      .   +...+ ..+++++++||+.+||+.+  ...   .+      .. .+.++.+.+.+.   .+++   ..++|++++.
T Consensus       135 ~e~~~~~~~~~~gi~~~ivrp~~v~g~~~--~~~---~~------~~-~~~~~~~~~~~~---~~i~---~~Dva~~~~~  196 (221)
T 3ew7_A          135 AKQLEHLKSHQAEFSWTYISPSAMFEPGE--RTG---DY------QI-GKDHLLFGSDGN---SFIS---MEDYAIAVLD  196 (221)
T ss_dssp             HHHHHHHHTTTTTSCEEEEECSSCCCCC------------------------------------CCC---HHHHHHHHHH
T ss_pred             HHHHHHHHhhccCccEEEEeCcceecCCC--ccC---ce------Ee-ccccceecCCCC---ceEe---HHHHHHHHHH
Confidence            1   12223 7899999999999999522  111   01      00 122223334333   2333   4556888888


Q ss_pred             HhcCCCCCCceeeecCCCeeeHHH
Q 016047          262 AAVDPYAKNEAFNCNNGDVFKWKH  285 (396)
Q Consensus       262 ~~~~~~~~g~~~ni~~~~~~s~~e  285 (396)
                      ++.++...+++||++++...+.+|
T Consensus       197 ~l~~~~~~g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          197 EIERPNHLNEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             HHHSCSCTTSEEECCC--------
T ss_pred             HHhCccccCCEEEECCCCcccccc
Confidence            888888889999999887766543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.91  E-value=2.1e-24  Score=196.55  Aligned_cols=217  Identities=13%  Similarity=0.067  Sum_probs=157.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEecc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVTW  105 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~~  105 (396)
                      |+||||||||+||++|+++|++     +|++|++++|++....  ..+++++.+|++|++++.++++++|.|+|+|+.. 
T Consensus         4 k~vlVTGasg~IG~~la~~L~~-----~G~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~-   75 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERLAP-----MAEILRLADLSPLDPA--GPNEECVQCDLADANAVNAMVAGCDGIVHLGGIS-   75 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHTGG-----GEEEEEEEESSCCCCC--CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCC-
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----cCCEEEEEecCCcccc--CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc-
Confidence            6899999999999999999999     8999999999875532  3688999999999999999999999999998752 


Q ss_pred             CCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH----
Q 016047          106 TNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL----  181 (396)
Q Consensus       106 ~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~----  181 (396)
                       ...+....+++|+.|+.+++++|++.+  ..+++++||..+|+.       . +...+++|+.|..+..  .|+.    
T Consensus        76 -~~~~~~~~~~~N~~g~~~l~~a~~~~~--~~~iv~~SS~~~~g~-------~-~~~~~~~e~~~~~~~~--~Y~~sK~~  142 (267)
T 3rft_A           76 -VEKPFEQILQGNIIGLYNLYEAARAHG--QPRIVFASSNHTIGY-------Y-PQTERLGPDVPARPDG--LYGVSKCF  142 (267)
T ss_dssp             -SCCCHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGTT-------S-BTTSCBCTTSCCCCCS--HHHHHHHH
T ss_pred             -CcCCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEcchHHhCC-------C-CCCCCCCCCCCCCCCC--hHHHHHHH
Confidence             334667889999999999999998764  678888887655532       1 1245778887765543  3765    


Q ss_pred             -HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHH
Q 016047          182 -EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQI  260 (396)
Q Consensus       182 -e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i  260 (396)
                       |.++..+. ++.+++++++||+.|+|..  .                          +......++++.|   +++.+.
T Consensus       143 ~e~~~~~~a-~~~g~~~~~vr~~~v~~~~--~--------------------------~~~~~~~~~~~~d---~a~~~~  190 (267)
T 3rft_A          143 GENLARMYF-DKFGQETALVRIGSCTPEP--N--------------------------NYRMLSTWFSHDD---FVSLIE  190 (267)
T ss_dssp             HHHHHHHHH-HHHCCCEEEEEECBCSSSC--C--------------------------STTHHHHBCCHHH---HHHHHH
T ss_pred             HHHHHHHHH-HHhCCeEEEEEeecccCCC--C--------------------------CCCceeeEEcHHH---HHHHHH
Confidence             44444443 4678999999999999931  1                          0111123334444   356666


Q ss_pred             HHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCC
Q 016047          261 WAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE  297 (396)
Q Consensus       261 ~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~  297 (396)
                      .++..+...+.++++++++..++.++...  +.+|..
T Consensus       191 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~g~~  225 (267)
T 3rft_A          191 AVFRAPVLGCPVVWGASANDAGWWDNSHL--GFLGWK  225 (267)
T ss_dssp             HHHHCSCCCSCEEEECCCCTTCCBCCGGG--GGGCCC
T ss_pred             HHHhCCCCCceEEEEeCCCCCCcccChhH--HHCCCC
Confidence            66666555567788888777776665333  455654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.91  E-value=1.4e-24  Score=204.93  Aligned_cols=227  Identities=17%  Similarity=0.110  Sum_probs=160.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCC-Cc-EEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGG-PW-KVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~-~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      +|+|||||||||||++|+++|++     . |+ +|++++|++...     .....+++++.+|++|.+++.++++++|.|
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~-----~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~V   95 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLD-----TTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDIC   95 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----HCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHh-----hCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence            48999999999999999999998     7 87 999999975321     001257899999999999999999999999


Q ss_pred             eEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCC
Q 016047           98 THIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  175 (396)
Q Consensus        98 ~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~  175 (396)
                      +|+|+.....  ..++.+.+++|+.|+.+++++|.+.+  +++++++||...|       .                |  
T Consensus        96 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~--v~~~V~~SS~~~~-------~----------------p--  148 (344)
T 2gn4_A           96 IHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA--ISQVIALSTDKAA-------N----------------P--  148 (344)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGS-------S----------------C--
T ss_pred             EECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEecCCccC-------C----------------C--
Confidence            9998754321  12467789999999999999999874  7888888742211       0                1  


Q ss_pred             CcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC-CceecCCccccceee
Q 016047          176 NFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWECYS  247 (396)
Q Consensus       176 ~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~~  247 (396)
                      ...|+.     |+++..+..  ...+++++++||++|||  ++.  +....+..  .+.  .+. ++.+. ++...+.++
T Consensus       149 ~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g--~~~--~~i~~~~~--~~~--~g~~~~~i~-~~~~~r~~i  219 (344)
T 2gn4_A          149 INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVG--SRG--SVVPFFKK--LVQ--NKASEIPIT-DIRMTRFWI  219 (344)
T ss_dssp             CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETT--CTT--SHHHHHHH--HHH--HTCCCEEES-CTTCEEEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEEC--CCC--CHHHHHHH--HHH--cCCCceEEe-CCCeEEeeE
Confidence            122664     555544431  12579999999999999  432  11121211  111  244 55544 445556666


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCC
Q 016047          248 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIE  297 (396)
Q Consensus       248 ~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~  297 (396)
                      ++.|+   |++++.++..+ ..|++||+.++ .+|+.|+++.+++.++..
T Consensus       220 ~v~D~---a~~v~~~l~~~-~~g~~~~~~~~-~~s~~el~~~i~~~~~~~  264 (344)
T 2gn4_A          220 TLDEG---VSFVLKSLKRM-HGGEIFVPKIP-SMKMTDLAKALAPNTPTK  264 (344)
T ss_dssp             CHHHH---HHHHHHHHHHC-CSSCEEEECCC-EEEHHHHHHHHCTTCCEE
T ss_pred             EHHHH---HHHHHHHHhhc-cCCCEEecCCC-cEEHHHHHHHHHHhCCee
Confidence            66665   77777766543 45789998765 699999999998766543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.91  E-value=5.4e-25  Score=198.38  Aligned_cols=230  Identities=13%  Similarity=0.062  Sum_probs=157.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ++|+|||||||||||++++++|++     .  |++|++++|++........+++++.+|++|++++.++++++|.|+|+|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~-----~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   77 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKE-----GSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILT   77 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHH-----TTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHh-----cCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEec
Confidence            457999999999999999999998     6  899999999753210012467899999999999999999999999998


Q ss_pred             EeccCC-----------Cc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047          102 YVTWTN-----------RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus       102 ~~~~~~-----------~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      +.....           ..    .....+++|+.++.+++++|++.+  +++++++||...+       .          
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~-------~----------  138 (253)
T 1xq6_A           78 SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG--VKHIVVVGSMGGT-------N----------  138 (253)
T ss_dssp             CCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT--CSEEEEEEETTTT-------C----------
T ss_pred             cccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC--CCEEEEEcCccCC-------C----------
Confidence            753210           00    112457999999999999998864  6788887753221       1          


Q ss_pred             CCCCCCCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcccccee
Q 016047          167 EDMPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECY  246 (396)
Q Consensus       167 E~~p~~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  246 (396)
                      +..|..+.....|...|...+.+.+..+++++++||+.+||+.... ...          ......+  +.+..   ..+
T Consensus       139 ~~~~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~-~~~----------~~~~~~~--~~~~~---~~~  202 (253)
T 1xq6_A          139 PDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV-REL----------LVGKDDE--LLQTD---TKT  202 (253)
T ss_dssp             TTCGGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSS-SCE----------EEESTTG--GGGSS---CCE
T ss_pred             CCCccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcch-hhh----------hccCCcC--CcCCC---CcE
Confidence            1111111111236655555554446689999999999999953211 110          0001111  12211   234


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCceeeecCCC---eeeHHHHHHHHHHHhCC
Q 016047          247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD---VFKWKHLWKVLAEQFGI  296 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~---~~s~~el~~~l~~~~g~  296 (396)
                      +++   .++|++++.++.++...+++||+++++   .+|++|+++.+++.+|.
T Consensus       203 ~~~---~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          203 VPR---ADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             EEH---HHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             EcH---HHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            444   445888888877655568899999864   59999999999998875

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.91  E-value=1e-24  Score=208.10  Aligned_cols=211  Identities=16%  Similarity=0.118  Sum_probs=154.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |+|||||||||||++|+++|++     +|+ +|++++|.                  .|++++.++++++|.|+|+|+..
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~-----~g~~~v~~~d~~------------------~d~~~l~~~~~~~d~Vih~a~~~   57 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTS-----TTDHHIFEVHRQ------------------TKEEELESALLKADFIVHLAGVN   57 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----HCCCEEEECCTT------------------CCHHHHHHHHHHCSEEEECCCSB
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCCCEEEEECCC------------------CCHHHHHHHhccCCEEEECCcCC
Confidence            5899999999999999999998     788 77776663                  67889999999999999998754


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc-eEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh---
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR-HVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT---  180 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~-~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~---  180 (396)
                      .  ..++...+++|+.++.+++++|++.+  ++ +++++||..+|       +                   ...|+   
T Consensus        58 ~--~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~v~~Ss~~~~-------~-------------------~~~Y~~sK  107 (369)
T 3st7_A           58 R--PEHDKEFSLGNVSYLDHVLDILTRNT--KKPAILLSSSIQAT-------Q-------------------DNPYGESK  107 (369)
T ss_dssp             C--TTCSTTCSSSCCBHHHHHHHHHTTCS--SCCEEEEEEEGGGG-------S-------------------CSHHHHHH
T ss_pred             C--CCCHHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEeCchhhc-------C-------------------CCCchHHH
Confidence            3  23456678899999999999999875  44 78877754433       2                   11144   


Q ss_pred             --HHHHHHHHhhcCCCeeEEEEcCCceeecCCCC-cchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHH
Q 016047          181 --LEDILFEEVEKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAE  257 (396)
Q Consensus       181 --~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~  257 (396)
                        .|+++.++. ++.+++++++||+++||+.... ..++...+...  +.  .+.++.+ +++.+.+.++++.|+   |+
T Consensus       108 ~~~E~~~~~~~-~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~--~~--~~~~~~~-~~~~~~~~~i~v~Dv---a~  178 (369)
T 3st7_A          108 LQGEQLLREYA-EEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYK--IA--RNEEIQV-NDRNVELTLNYVDDI---VA  178 (369)
T ss_dssp             HHHHHHHHHHH-HHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHH--HH--TTCCCCC-SCTTCEEEEEEHHHH---HH
T ss_pred             HHHHHHHHHHH-HHhCCCEEEEECCceeCCCCCCCcchHHHHHHHH--HH--cCCCeEe-cCCCeEEEEEEHHHH---HH
Confidence              466666654 5578999999999999954322 22333333111  12  2444333 345555666666655   88


Q ss_pred             HHHHHhcCCCCC-CceeeecCCCeeeHHHHHHHHHHHhCCCC
Q 016047          258 HQIWAAVDPYAK-NEAFNCNNGDVFKWKHLWKVLAEQFGIED  298 (396)
Q Consensus       258 ~~i~~~~~~~~~-g~~~ni~~~~~~s~~el~~~l~~~~g~~~  298 (396)
                      +++.++..+... +++||++++..+|+.|+++.+++.+|.+.
T Consensus       179 ~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~  220 (369)
T 3st7_A          179 EIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRL  220 (369)
T ss_dssp             HHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCCCc
Confidence            888877765554 89999999999999999999999998764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.90  E-value=4.6e-24  Score=188.98  Aligned_cols=217  Identities=13%  Similarity=0.104  Sum_probs=142.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |+|||||||||||++|+++|++     +|++|++++|++.... ....+++++.+|++|+++  +++.++|.|+|+|+..
T Consensus         1 MkilVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARR-----RGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVP   73 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHH-----CCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccC
Confidence            4799999999999999999999     8999999999864310 112578999999999987  7889999999998764


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  184 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~  184 (396)
                      +..     ...++|+.++++++++|++.+   ++++++||...+      ++.......+.+|..  .+.+...|+..|.
T Consensus        74 ~~~-----~~~~~n~~~~~~l~~a~~~~~---~~~v~~SS~~~~------~~~~~~~~~~~~~~~--~~~~~~~y~~sK~  137 (224)
T 3h2s_A           74 WGS-----GRGYLHLDFATHLVSLLRNSD---TLAVFILGSASL------AMPGADHPMILDFPE--SAASQPWYDGALY  137 (224)
T ss_dssp             TTS-----SCTHHHHHHHHHHHHTCTTCC---CEEEEECCGGGS------BCTTCSSCGGGGCCG--GGGGSTTHHHHHH
T ss_pred             CCc-----chhhHHHHHHHHHHHHHHHcC---CcEEEEecceee------ccCCCCccccccCCC--CCccchhhHHHHH
Confidence            221     125789999999999999864   677777754322      211100011233332  2322344775444


Q ss_pred             HHHH---hhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 016047          185 LFEE---VEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  261 (396)
Q Consensus       185 l~~~---~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~  261 (396)
                      ..+.   ..+..+++++++||+.+||+.+..  .+.          . ....+...+..   ..++   ++.++|++++.
T Consensus       138 ~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~--~~~----------~-~~~~~~~~~~~---~~~i---~~~DvA~~~~~  198 (224)
T 3h2s_A          138 QYYEYQFLQMNANVNWIGISPSEAFPSGPAT--SYV----------A-GKDTLLVGEDG---QSHI---TTGNMALAILD  198 (224)
T ss_dssp             HHHHHHHHTTCTTSCEEEEEECSBCCCCCCC--CEE----------E-ESSBCCCCTTS---CCBC---CHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCcEEEEcCccccCCCccc--Cce----------e-cccccccCCCC---CceE---eHHHHHHHHHH
Confidence            4332   225778999999999999953221  110          0 11222222222   2344   44555889999


Q ss_pred             HhcCCCCCCceeeecCCCeeeHH
Q 016047          262 AAVDPYAKNEAFNCNNGDVFKWK  284 (396)
Q Consensus       262 ~~~~~~~~g~~~ni~~~~~~s~~  284 (396)
                      ++.++...+++|++++.+..++.
T Consensus       199 ~l~~~~~~g~~~~~~~~~~~~~~  221 (224)
T 3h2s_A          199 QLEHPTAIRDRIVVRDADLEHHH  221 (224)
T ss_dssp             HHHSCCCTTSEEEEEECC-----
T ss_pred             HhcCccccCCEEEEecCcchhcc
Confidence            88888888999999987766554

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.90  E-value=7.7e-24  Score=196.05  Aligned_cols=228  Identities=14%  Similarity=-0.033  Sum_probs=154.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCCC---CCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNW---NADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ++|+||||||||+||++++++|++     .| ++|++++|++....   ....+++++.+|+.|++++.++++++|.|+|
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~-----~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   78 (299)
T 2wm3_A            4 DKKLVVVFGGTGAQGGSVARTLLE-----DGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFI   78 (299)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHH-----HCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHh-----cCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEE
Confidence            347999999999999999999998     67 99999999865410   0124789999999999999999999999999


Q ss_pred             EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047          100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  179 (396)
Q Consensus       100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y  179 (396)
                      +++...      ....+.|+.++++++++|++.+  +++++++|+..+|       +.        .+..+    .. .|
T Consensus        79 ~a~~~~------~~~~~~~~~~~~~~~~aa~~~g--v~~iv~~S~~~~~-------~~--------~~~~~----~~-~y  130 (299)
T 2wm3_A           79 VTNYWE------SCSQEQEVKQGKLLADLARRLG--LHYVVYSGLENIK-------KL--------TAGRL----AA-AH  130 (299)
T ss_dssp             CCCHHH------HTCHHHHHHHHHHHHHHHHHHT--CSEEEECCCCCHH-------HH--------TTTSC----CC-HH
T ss_pred             eCCCCc------cccchHHHHHHHHHHHHHHHcC--CCEEEEEcCcccc-------cc--------CCCcc----cC-ch
Confidence            965311      1124578999999999999864  7888876543322       21        11111    11 24


Q ss_pred             hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC--ceecCCccccceeeecccHHHHHH
Q 016047          180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP--LRFPGTKAAWECYSIASDADLIAE  257 (396)
Q Consensus       180 ~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~g~~~~~~~~~~~~da~~la~  257 (396)
                      ...|...+.+.+..+++++++||+.+||+.......   .       ....+..  +.++ .+.....++++.|+   |+
T Consensus       131 ~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~~~~~---~-------~~~~g~~~~~~~~-~~~~~~~~i~~~Dv---a~  196 (299)
T 2wm3_A          131 FDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLP---Q-------KAPDGKSYLLSLP-TGDVPMDGMSVSDL---GP  196 (299)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEECCEEGGGGGTTTCC---E-------ECTTSSSEEECCC-CTTSCEEEECGGGH---HH
T ss_pred             hhHHHHHHHHHHHCCCCEEEEeecHHhhhchhhcCC---c-------ccCCCCEEEEEec-CCCCccceecHHHH---HH
Confidence            443333332224468999999999999942110000   0       0011221  1223 23445567777776   66


Q ss_pred             HHHHHhcCC-CCCCceeeecCCCeeeHHHHHHHHHHHhCCCCC
Q 016047          258 HQIWAAVDP-YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  299 (396)
Q Consensus       258 ~~i~~~~~~-~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~  299 (396)
                      +++.++.++ ...|++||+++ +.+|+.|+++.+.+.+|.+..
T Consensus       197 ~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~  238 (299)
T 2wm3_A          197 VVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVH  238 (299)
T ss_dssp             HHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEE
T ss_pred             HHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCce
Confidence            666666543 23578999986 689999999999999998754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.90  E-value=1.1e-23  Score=196.25  Aligned_cols=232  Identities=13%  Similarity=0.093  Sum_probs=156.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---------CCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      ++|||||||||||++++++|++     .|++|++++|++....         ....+++++.+|+.|++++.++++++|.
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~   79 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASIS-----LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDV   79 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHH-----TTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHh-----CCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCE
Confidence            6899999999999999999999     7999999999854210         0135789999999999999999999999


Q ss_pred             eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCC
Q 016047           97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  176 (396)
Q Consensus        97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~  176 (396)
                      |+|+++....         ..|+.++.+++++|++.+ ++++|++ |          .||...  ..+   +.+..|. .
T Consensus        80 vi~~a~~~~~---------~~~~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~~--~~~---~~~~~p~-~  132 (313)
T 1qyd_A           80 VISALAGGVL---------SHHILEQLKLVEAIKEAG-NIKRFLP-S----------EFGMDP--DIM---EHALQPG-S  132 (313)
T ss_dssp             EEECCCCSSS---------STTTTTHHHHHHHHHHSC-CCSEEEC-S----------CCSSCT--TSC---CCCCSST-T
T ss_pred             EEECCccccc---------hhhHHHHHHHHHHHHhcC-CCceEEe-c----------CCcCCc--ccc---ccCCCCC-c
Confidence            9999764221         237888999999999864 3778773 2          444210  111   1222222 2


Q ss_pred             cchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHH
Q 016047          177 FYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIA  256 (396)
Q Consensus       177 ~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la  256 (396)
                      ..| ..|...+.+.++.+++++++||+.++|........... .      .......+.+++++.....++++.|   +|
T Consensus       133 ~~y-~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~g~~~~~~i~~~D---va  201 (313)
T 1qyd_A          133 ITF-IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDG-H------MMPPRDKVLIYGDGNVKGIWVDEDD---VG  201 (313)
T ss_dssp             HHH-HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTC-C------SSCCSSEECCBTTSCSEEEEECHHH---HH
T ss_pred             chH-HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccc-c------ccCCCCeEEEeCCCCceEEEEEHHH---HH
Confidence            236 44443333335678999999999988842111100000 0      0001223345566665556666555   48


Q ss_pred             HHHHHHhcCCCCCCceeeecCC-CeeeHHHHHHHHHHHhCCCCCC
Q 016047          257 EHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYG  300 (396)
Q Consensus       257 ~~~i~~~~~~~~~g~~~ni~~~-~~~s~~el~~~l~~~~g~~~~~  300 (396)
                      ++++.++.++...+++|++.++ +.+|+.|+++.+.+.+|.+...
T Consensus       202 ~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~  246 (313)
T 1qyd_A          202 TYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDK  246 (313)
T ss_dssp             HHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred             HHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCce
Confidence            8888777665556788888764 7899999999999999987543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.89  E-value=2.5e-23  Score=194.27  Aligned_cols=225  Identities=14%  Similarity=0.086  Sum_probs=154.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-----CCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-----NADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-----~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      .|.++||||||||+||++|+++|++     .|++|++++|++....     ....+++++.+|+.|++++.++++++|.|
T Consensus         9 ~m~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~v   83 (318)
T 2r6j_A            9 GMKSKILIFGGTGYIGNHMVKGSLK-----LGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVV   83 (318)
T ss_dssp             CCCCCEEEETTTSTTHHHHHHHHHH-----TTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHH-----CCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEE
Confidence            3556899999999999999999999     7999999999874210     01247899999999999999999999999


Q ss_pred             eEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCc
Q 016047           98 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF  177 (396)
Q Consensus        98 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~  177 (396)
                      +|+++..             ++.++++++++|++.+ ++++|++ |          .||..      .+|..+..|. ..
T Consensus        84 i~~a~~~-------------~~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~------~~~~~~~~p~-~~  131 (318)
T 2r6j_A           84 ISALAFP-------------QILDQFKILEAIKVAG-NIKRFLP-S----------DFGVE------EDRINALPPF-EA  131 (318)
T ss_dssp             EECCCGG-------------GSTTHHHHHHHHHHHC-CCCEEEC-S----------CCSSC------TTTCCCCHHH-HH
T ss_pred             EECCchh-------------hhHHHHHHHHHHHhcC-CCCEEEe-e----------ccccC------cccccCCCCc-ch
Confidence            9997632             1456789999998864 2677763 2          34421      1222222221 12


Q ss_pred             chhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhh-cCCCceecCCccccceeeecccHHHHH
Q 016047          178 YYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH-EGIPLRFPGTKAAWECYSIASDADLIA  256 (396)
Q Consensus       178 ~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~g~~~~~~~~~~~~da~~la  256 (396)
                      .| ..|...+.+.++.+++++++||+.+++.       +...+     +... ...++.+++++.....++++.|   +|
T Consensus       132 ~y-~sK~~~e~~~~~~~~~~~~lr~~~~~~~-------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~D---va  195 (318)
T 2r6j_A          132 LI-ERKRMIRRAIEEANIPYTYVSANCFASY-------FINYL-----LRPYDPKDEITVYGTGEAKFAMNYEQD---IG  195 (318)
T ss_dssp             HH-HHHHHHHHHHHHTTCCBEEEECCEEHHH-------HHHHH-----HCTTCCCSEEEEETTSCCEEEEECHHH---HH
T ss_pred             hH-HHHHHHHHHHHhcCCCeEEEEcceehhh-------hhhhh-----ccccCCCCceEEecCCCceeeEeeHHH---HH
Confidence            35 4343333222567899999999887772       11111     0111 1233455666665556665555   47


Q ss_pred             HHHHHHhcCCCCCCceeeecC-CCeeeHHHHHHHHHHHhCCCCCC
Q 016047          257 EHQIWAAVDPYAKNEAFNCNN-GDVFKWKHLWKVLAEQFGIEDYG  300 (396)
Q Consensus       257 ~~~i~~~~~~~~~g~~~ni~~-~~~~s~~el~~~l~~~~g~~~~~  300 (396)
                      ++++.++.++...+++|++.+ ++.+|+.|+++.+.+.+|.+...
T Consensus       196 ~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~  240 (318)
T 2r6j_A          196 LYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKK  240 (318)
T ss_dssp             HHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred             HHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCce
Confidence            887777766555678888875 47899999999999999987543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.89  E-value=4.6e-24  Score=187.66  Aligned_cols=206  Identities=15%  Similarity=0.102  Sum_probs=144.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      |+|+||||||||+||++++++|++     +|+  +|++++|++..   ..++++++.+|+.|++++.+++  +|.|+|++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~-----~g~~~~V~~~~r~~~~---~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a   73 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILS-----EPTLAKVIAPARKALA---EHPRLDNPVGPLAELLPQLDGS--IDTAFCCL   73 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHH-----CTTCCEEECCBSSCCC---CCTTEECCBSCHHHHGGGCCSC--CSEEEECC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHh-----CCCCCeEEEEeCCCcc---cCCCceEEeccccCHHHHHHhh--hcEEEECe
Confidence            668999999999999999999998     787  99999998765   2357889999999988877766  88899997


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      +.......+....+++|+.++.+++++|++.+  +++++++||...|       +.                 +...|+.
T Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~-------~~-----------------~~~~y~~  127 (215)
T 2a35_A           74 GTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG--ARHYLVVSALGAD-------AK-----------------SSIFYNR  127 (215)
T ss_dssp             CCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCC-------TT-----------------CSSHHHH
T ss_pred             eeccccCCCHHHHHHhhHHHHHHHHHHHHHcC--CCEEEEECCcccC-------CC-----------------CccHHHH
Confidence            74332223567788999999999999998864  6788887753322       21                 1223887


Q ss_pred             HHHHHHHhhcCCCee-EEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHH
Q 016047          182 EDILFEEVEKKEELS-WSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQI  260 (396)
Q Consensus       182 e~~l~~~~~~~~~~~-~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i  260 (396)
                      .|...+...+..+++ ++++||+.+||+  +....+...+      .   ....++ +.+  ...++   +++++|++++
T Consensus       128 sK~~~e~~~~~~~~~~~~~vrp~~v~g~--~~~~~~~~~~------~---~~~~~~-~~~--~~~~i---~~~Dva~~~~  190 (215)
T 2a35_A          128 VKGELEQALQEQGWPQLTIARPSLLFGP--REEFRLAEIL------A---APIARI-LPG--KYHGI---EACDLARALW  190 (215)
T ss_dssp             HHHHHHHHHTTSCCSEEEEEECCSEEST--TSCEEGGGGT------T---CCCC-----C--HHHHH---HHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCeEEEEeCceeeCC--CCcchHHHHH------H---Hhhhhc-cCC--CcCcE---eHHHHHHHHH
Confidence            777666555677899 999999999994  3222211111      1   111111 111  22333   4455588888


Q ss_pred             HHhcCCCCCCceeeecCCCeeeHH
Q 016047          261 WAAVDPYAKNEAFNCNNGDVFKWK  284 (396)
Q Consensus       261 ~~~~~~~~~g~~~ni~~~~~~s~~  284 (396)
                      .++.++.  +++||+++++..++.
T Consensus       191 ~~~~~~~--~~~~~i~~~~~~~~~  212 (215)
T 2a35_A          191 RLALEEG--KGVRFVESDELRKLG  212 (215)
T ss_dssp             HHHTCCC--SEEEEEEHHHHHHHH
T ss_pred             HHHhcCC--CCceEEcHHHHHHhh
Confidence            8776543  789999987665543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.88  E-value=1.8e-23  Score=194.18  Aligned_cols=226  Identities=14%  Similarity=0.103  Sum_probs=153.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      ++|||||||||||++|+++|++     .|++|++++|++...          .....+++++.+|+.|++++.++++++|
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d   79 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLD-----LGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVD   79 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHH-----TTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHh-----CCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCC
Confidence            6899999999999999999999     799999999985421          0013578999999999999999999999


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCC
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  175 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~  175 (396)
                      .|+|+++..             ++.++.+++++|++++ ++++|++ |          .||..      .+|..+..|. 
T Consensus        80 ~vi~~a~~~-------------~~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~------~~~~~~~~p~-  127 (308)
T 1qyc_A           80 VVISTVGSL-------------QIESQVNIIKAIKEVG-TVKRFFP-S----------EFGND------VDNVHAVEPA-  127 (308)
T ss_dssp             EEEECCCGG-------------GSGGGHHHHHHHHHHC-CCSEEEC-S----------CCSSC------TTSCCCCTTH-
T ss_pred             EEEECCcch-------------hhhhHHHHHHHHHhcC-CCceEee-c----------ccccC------ccccccCCcc-
Confidence            999997632             1456788999999864 3677763 2          34421      1222332221 


Q ss_pred             CcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHH
Q 016047          176 NFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLI  255 (396)
Q Consensus       176 ~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~l  255 (396)
                      ...| ..|...+.+.++.+++++++||+.++|..........  .      .......+.+++++.+...++++.|   +
T Consensus       128 ~~~y-~sK~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~i~~~D---v  195 (308)
T 1qyc_A          128 KSVF-EVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAG--L------TAPPRDKVVILGDGNARVVFVKEED---I  195 (308)
T ss_dssp             HHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTT--C------SSCCSSEEEEETTSCCEEEEECHHH---H
T ss_pred             hhHH-HHHHHHHHHHHhcCCCeEEEEeceecccccccccccc--c------cCCCCCceEEecCCCceEEEecHHH---H
Confidence            2236 4443333332556899999999999884221111000  0      0001223455666665566665555   4


Q ss_pred             HHHHHHHhcCCCCCCceeeecCC-CeeeHHHHHHHHHHHhCCCCCC
Q 016047          256 AEHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYG  300 (396)
Q Consensus       256 a~~~i~~~~~~~~~g~~~ni~~~-~~~s~~el~~~l~~~~g~~~~~  300 (396)
                      |++++.++.++...+++|++.++ +.+|++|+++.+.+.+|.+...
T Consensus       196 a~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~  241 (308)
T 1qyc_A          196 GTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEK  241 (308)
T ss_dssp             HHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEE
T ss_pred             HHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCce
Confidence            78777766665556788888764 6899999999999999987543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.88  E-value=8.5e-23  Score=190.91  Aligned_cols=236  Identities=14%  Similarity=0.098  Sum_probs=158.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-CCCC---------CCCCCeeEEEecCCChHHHHHHHhc
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPNW---------NADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      |.++|||||||||||++|+++|++     .|++|++++|++ ....         ....+++++.+|+.|++++.+++++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~   77 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLS-----FSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQ   77 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHH-----TTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred             cccEEEEEcCCchhHHHHHHHHHh-----CCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcC
Confidence            346899999999999999999999     799999999986 2110         0124789999999999999999999


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      +|.|+|+++..             ++.++++++++|++.+ ++++|++ |          .||..      .+|+.+..|
T Consensus        78 ~d~vi~~a~~~-------------~~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~------~~~~~~~~p  126 (321)
T 3c1o_A           78 VDIVISALPFP-------------MISSQIHIINAIKAAG-NIKRFLP-S----------DFGCE------EDRIKPLPP  126 (321)
T ss_dssp             CSEEEECCCGG-------------GSGGGHHHHHHHHHHC-CCCEEEC-S----------CCSSC------GGGCCCCHH
T ss_pred             CCEEEECCCcc-------------chhhHHHHHHHHHHhC-CccEEec-c----------ccccC------ccccccCCC
Confidence            99999997632             1566789999998864 2677762 2          34421      123222222


Q ss_pred             CCCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHh-h-hcCCCceecCCccccceeeeccc
Q 016047          174 APNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC-K-HEGIPLRFPGTKAAWECYSIASD  251 (396)
Q Consensus       174 ~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~-~-~~~~~~~~~g~~~~~~~~~~~~d  251 (396)
                      . ...| ..|...+.+.+..+++++++||+.++|.       +...+   .... . ..+..+...+++.....++++.|
T Consensus       127 ~-~~~y-~sK~~~e~~~~~~~~~~~~lrp~~~~~~-------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (321)
T 3c1o_A          127 F-ESVL-EKKRIIRRAIEAAALPYTYVSANCFGAY-------FVNYL---LHPSPHPNRNDDIVIYGTGETKFVLNYEED  194 (321)
T ss_dssp             H-HHHH-HHHHHHHHHHHHHTCCBEEEECCEEHHH-------HHHHH---HCCCSSCCTTSCEEEETTSCCEEEEECHHH
T ss_pred             c-chHH-HHHHHHHHHHHHcCCCeEEEEeceeccc-------ccccc---ccccccccccCceEEecCCCcceeEeeHHH
Confidence            1 2235 4443333332556899999999988882       11111   0000 0 01223455566665556665555


Q ss_pred             HHHHHHHHHHHhcCCCCCCceeeecC-CCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhc
Q 016047          252 ADLIAEHQIWAAVDPYAKNEAFNCNN-GDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  322 (396)
Q Consensus       252 a~~la~~~i~~~~~~~~~g~~~ni~~-~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (396)
                         +|++++.++.++...+++|++++ ++.+|++|+++.+.+.+|.+...            ..++..+|..
T Consensus       195 ---va~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~------------~~~~~~~~~~  251 (321)
T 3c1o_A          195 ---IAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKK------------VHMPDEQLVR  251 (321)
T ss_dssp             ---HHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCE------------EEECHHHHHH
T ss_pred             ---HHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCccee------------eeCCHHHHHH
Confidence               57887777776656688888876 47899999999999999987543            4466666554

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.87  E-value=9e-23  Score=189.42  Aligned_cols=226  Identities=15%  Similarity=0.127  Sum_probs=151.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-CCCCC----------CCCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPNWN----------ADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~~~----------~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      ++|||||||||||++|+++|++     .|++|++++|++ ....+          ...+++++.+|+.|++++.++++++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~   77 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIK-----AGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQV   77 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHH-----HTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             cEEEEECCCchHHHHHHHHHHh-----CCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCC
Confidence            6899999999999999999998     799999999986 11000          1247899999999999999999999


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      |.|+|+++...             +.++.+++++|++.+ .+++|++ |          .||..      .+|..+..|.
T Consensus        78 d~vi~~a~~~~-------------~~~~~~l~~aa~~~g-~v~~~v~-S----------~~g~~------~~~~~~~~p~  126 (307)
T 2gas_A           78 DIVICAAGRLL-------------IEDQVKIIKAIKEAG-NVKKFFP-S----------EFGLD------VDRHDAVEPV  126 (307)
T ss_dssp             SEEEECSSSSC-------------GGGHHHHHHHHHHHC-CCSEEEC-S----------CCSSC------TTSCCCCTTH
T ss_pred             CEEEECCcccc-------------cccHHHHHHHHHhcC-CceEEee-c----------ccccC------cccccCCCcc
Confidence            99999965321             456788999998864 2677762 2          34421      1222222221


Q ss_pred             CCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 016047          175 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  254 (396)
Q Consensus       175 ~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  254 (396)
                       ...| ..|...+.+.+..+++++++||+.++|..........  .      .......+.+++++.....++++.|   
T Consensus       127 -~~~y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~i~~~D---  193 (307)
T 2gas_A          127 -RQVF-EEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLD--A------TDPPRDKVVILGDGNVKGAYVTEAD---  193 (307)
T ss_dssp             -HHHH-HHHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTT--C------SSCCSSEEEEETTSCSEEEEECHHH---
T ss_pred             -hhHH-HHHHHHHHHHHHcCCCeEEEEcceeeccccccccccc--c------ccCCCCeEEEecCCCcceEEeeHHH---
Confidence             2235 4443333332556899999999998883211000000  0      0001223445566655556665555   


Q ss_pred             HHHHHHHHhcCCCCCCceeeecCC-CeeeHHHHHHHHHHHhCCCCCC
Q 016047          255 IAEHQIWAAVDPYAKNEAFNCNNG-DVFKWKHLWKVLAEQFGIEDYG  300 (396)
Q Consensus       255 la~~~i~~~~~~~~~g~~~ni~~~-~~~s~~el~~~l~~~~g~~~~~  300 (396)
                      +|++++.++.++...+++|++.++ +.+|++|+++.+.+.+|.+...
T Consensus       194 va~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~  240 (307)
T 2gas_A          194 VGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEK  240 (307)
T ss_dssp             HHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEE
T ss_pred             HHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCce
Confidence            478877777665556788888754 6899999999999999987543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.87  E-value=1.6e-21  Score=170.03  Aligned_cols=201  Identities=12%  Similarity=0.037  Sum_probs=138.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |+||||||||+||++++++|++     +|++|++++|++..... ...+++++.+|+.|++++.++++++|.|+|+++..
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQ-----AGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHH-----CCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence            6899999999999999999999     79999999998654211 13578999999999999999999999999998743


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI  184 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~  184 (396)
                      ..  .+   ..++|+.++.+++++|++.+  +++++++||..       +|+...  ..+         .+...|...|.
T Consensus        79 ~~--~~---~~~~n~~~~~~~~~~~~~~~--~~~~v~~Ss~~-------~~~~~~--~~~---------~~~~~y~~~K~  133 (206)
T 1hdo_A           79 ND--LS---PTTVMSEGARNIVAAMKAHG--VDKVVACTSAF-------LLWDPT--KVP---------PRLQAVTDDHI  133 (206)
T ss_dssp             TC--CS---CCCHHHHHHHHHHHHHHHHT--CCEEEEECCGG-------GTSCTT--CSC---------GGGHHHHHHHH
T ss_pred             CC--CC---ccchHHHHHHHHHHHHHHhC--CCeEEEEeeee-------eccCcc--ccc---------ccchhHHHHHH
Confidence            22  11   13589999999999999864  67888887654       333210  111         02233766655


Q ss_pred             HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhc
Q 016047          185 LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAV  264 (396)
Q Consensus       185 l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~  264 (396)
                      ..+...++.+++++++||+.+ |+.+... .+          .....   ..++     ..++++.   ++|++++.++.
T Consensus       134 ~~e~~~~~~~i~~~~lrp~~~-~~~~~~~-~~----------~~~~~---~~~~-----~~~i~~~---Dva~~~~~~~~  190 (206)
T 1hdo_A          134 RMHKVLRESGLKYVAVMPPHI-GDQPLTG-AY----------TVTLD---GRGP-----SRVISKH---DLGHFMLRCLT  190 (206)
T ss_dssp             HHHHHHHHTCSEEEEECCSEE-ECCCCCS-CC----------EEESS---SCSS-----CSEEEHH---HHHHHHHHTTS
T ss_pred             HHHHHHHhCCCCEEEEeCCcc-cCCCCCc-ce----------Eeccc---CCCC-----CCccCHH---HHHHHHHHHhc
Confidence            544433567899999999997 4222211 00          00000   0111     1444444   45888888887


Q ss_pred             CCCCCCceeeecCCC
Q 016047          265 DPYAKNEAFNCNNGD  279 (396)
Q Consensus       265 ~~~~~g~~~ni~~~~  279 (396)
                      ++...|++||++++.
T Consensus       191 ~~~~~g~~~~i~~g~  205 (206)
T 1hdo_A          191 TDEYDGHSTYPSHQY  205 (206)
T ss_dssp             CSTTTTCEEEEECCC
T ss_pred             Cccccccceeeeccc
Confidence            766678999998864

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.87  E-value=7.9e-22  Score=186.65  Aligned_cols=228  Identities=12%  Similarity=-0.008  Sum_probs=152.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEec-CCChHHHHHHHhcCCCeeE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCD-VSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~D-l~d~~~~~~~~~~~~~V~h   99 (396)
                      +|+|||||||||||++|+++|++     +|++|++++|++...    .....+++++.+| ++|++++.++++++|.|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~   79 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAA-----VGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI   79 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHH-----TTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence            57899999999999999999998     799999999986532    1112478999999 9999999999999999999


Q ss_pred             EEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcch
Q 016047          100 IFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYY  179 (396)
Q Consensus       100 ~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y  179 (396)
                      +++. +  .      .+.|..+ ++++++|++.+ ++++++++||...     ..|+.              .+...  |
T Consensus        80 ~a~~-~--~------~~~~~~~-~~l~~aa~~~g-~v~~~V~~SS~~~-----~~~~~--------------~~~~~--y  127 (352)
T 1xgk_A           80 NTTS-Q--A------GDEIAIG-KDLADAAKRAG-TIQHYIYSSMPDH-----SLYGP--------------WPAVP--M  127 (352)
T ss_dssp             CCCS-T--T------SCHHHHH-HHHHHHHHHHS-CCSEEEEEECCCG-----GGTSS--------------CCCCT--T
T ss_pred             cCCC-C--C------cHHHHHH-HHHHHHHHHcC-CccEEEEeCCccc-----cccCC--------------CCCcc--H
Confidence            8642 1  1      1347777 99999998864 1678888774320     12221              01112  5


Q ss_pred             hHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC-ceecCCccccceeeec-ccHHHHHH
Q 016047          180 TLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP-LRFPGTKAAWECYSIA-SDADLIAE  257 (396)
Q Consensus       180 ~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~g~~~~~~~~~~~-~da~~la~  257 (396)
                      ...|...+.+.+..+++++++||+ +||+.....  ....+ .  ......+.. +..++++.+...++++ .|   +|+
T Consensus       128 ~~sK~~~E~~~~~~gi~~~ivrpg-~~g~~~~~~--~~~~~-~--~~~~~~g~~~~~~~~~~~~~~~~i~v~~D---va~  198 (352)
T 1xgk_A          128 WAPKFTVENYVRQLGLPSTFVYAG-IYNNNFTSL--PYPLF-Q--MELMPDGTFEWHAPFDPDIPLPWLDAEHD---VGP  198 (352)
T ss_dssp             THHHHHHHHHHHTSSSCEEEEEEC-EEGGGCBSS--SCSSC-B--EEECTTSCEEEEESSCTTSCEEEECHHHH---HHH
T ss_pred             HHHHHHHHHHHHHcCCCEEEEecc-eecCCchhc--ccccc-c--ccccCCCceEEeeccCCCCceeeEecHHH---HHH
Confidence            555555444435668999999976 788432211  00000 0  000012322 2336655555556555 45   477


Q ss_pred             HHHHHhcCCC--CCCceeeecCCCeeeHHHHHHHHHHHhCCCCC
Q 016047          258 HQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  299 (396)
Q Consensus       258 ~~i~~~~~~~--~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~  299 (396)
                      +++.++.++.  ..+++||+++ +.+|+.|+++.+.+.+|.+..
T Consensus       199 ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~  241 (352)
T 1xgk_A          199 ALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVT  241 (352)
T ss_dssp             HHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred             HHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCc
Confidence            7777765432  2589999995 679999999999999998753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.83  E-value=3e-19  Score=159.36  Aligned_cols=202  Identities=12%  Similarity=0.023  Sum_probs=128.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      |.|+||||||||+||++|+++|++     .| ++|++++|++.... ....+++++.+|++|++++.++++++|.|+|++
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~-----~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a   96 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLAD-----KQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL   96 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTT-----CTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHh-----CCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence            347899999999999999999999     78 89999999865421 123588999999999999999999999999986


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      +..     .       ....++++++++++.+  +.+|+++||..+|...       .....+..+..+..+  ...|..
T Consensus        97 ~~~-----~-------~~~~~~~~~~~~~~~~--~~~iV~iSS~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~  153 (236)
T 3qvo_A           97 TGE-----D-------LDIQANSVIAAMKACD--VKRLIFVLSLGIYDEV-------PGKFVEWNNAVIGEP--LKPFRR  153 (236)
T ss_dssp             CST-----T-------HHHHHHHHHHHHHHTT--CCEEEEECCCCC-----------------------CGG--GHHHHH
T ss_pred             CCC-----c-------hhHHHHHHHHHHHHcC--CCEEEEEecceecCCC-------Ccccccchhhcccch--HHHHHH
Confidence            521     1       1135778999998864  6789988876655431       000112222221111  111222


Q ss_pred             HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 016047          182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  261 (396)
Q Consensus       182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~  261 (396)
                         .++.+ +..+++++++||+.+++........            ...+.  +..+      .+.+   ..++|+++++
T Consensus       154 ---~~~~l-~~~gi~~~~vrPg~i~~~~~~~~~~------------~~~~~--~~~~------~~i~---~~DvA~~i~~  206 (236)
T 3qvo_A          154 ---AADAI-EASGLEYTILRPAWLTDEDIIDYEL------------TSRNE--PFKG------TIVS---RKSVAALITD  206 (236)
T ss_dssp             ---HHHHH-HTSCSEEEEEEECEEECCSCCCCEE------------ECTTS--CCSC------SEEE---HHHHHHHHHH
T ss_pred             ---HHHHH-HHCCCCEEEEeCCcccCCCCcceEE------------eccCC--CCCC------cEEC---HHHHHHHHHH
Confidence               22233 4678999999999999942211100            00011  1111      2333   4455888888


Q ss_pred             HhcCCC-CCCceeeecCCCe
Q 016047          262 AAVDPY-AKNEAFNCNNGDV  280 (396)
Q Consensus       262 ~~~~~~-~~g~~~ni~~~~~  280 (396)
                      ++.++. ..+++|+++++..
T Consensus       207 ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          207 IIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             HHHSTTTTTTEEEEEECSSC
T ss_pred             HHcCcccccCeeEEecCCCC
Confidence            887655 5689999998654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.82  E-value=2.7e-20  Score=166.65  Aligned_cols=152  Identities=15%  Similarity=0.113  Sum_probs=116.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      +|+||||||||+||++++++|++     +|+  +|++++|++..... ...++.++.+|++|++++.++++++|.|+|+|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~-----~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   92 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILE-----QGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCL   92 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHH-----HTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHc-----CCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECC
Confidence            47999999999999999999999     899  99999998654211 12467899999999999999999999999998


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      +.... ..+....+++|+.++.+++++|++.+  +.+++++||...|       +.               +  ...|+.
T Consensus        93 g~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~iv~~SS~~~~-------~~---------------~--~~~Y~~  145 (242)
T 2bka_A           93 GTTRG-KAGAEGFVRVDRDYVLKSAELAKAGG--CKHFNLLSSKGAD-------KS---------------S--NFLYLQ  145 (242)
T ss_dssp             CCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCC-------TT---------------C--SSHHHH
T ss_pred             Ccccc-cCCcccceeeeHHHHHHHHHHHHHCC--CCEEEEEccCcCC-------CC---------------C--cchHHH
Confidence            74321 12356778999999999999998764  6788887754322       21               0  123777


Q ss_pred             HHHHHHHhhcCCCe-eEEEEcCCceeec
Q 016047          182 EDILFEEVEKKEEL-SWSVHRPDTIFGF  208 (396)
Q Consensus       182 e~~l~~~~~~~~~~-~~~ilRp~~v~G~  208 (396)
                      .|...+...+..++ +++++||+.++|+
T Consensus       146 sK~~~e~~~~~~~~~~~~~vrpg~v~~~  173 (242)
T 2bka_A          146 VKGEVEAKVEELKFDRYSVFRPGVLLCD  173 (242)
T ss_dssp             HHHHHHHHHHTTCCSEEEEEECCEEECT
T ss_pred             HHHHHHHHHHhcCCCCeEEEcCceecCC
Confidence            66555554466788 6999999999994

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.78  E-value=1.6e-18  Score=152.97  Aligned_cols=153  Identities=12%  Similarity=0.083  Sum_probs=108.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcC-CCCCCCCCcEEEEEeCCCC-CCCC---CCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPK-PNWN---ADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~-~~~~~~~g~~V~~l~R~~~-~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      .|.|+||||||||+||++++++|+ +     .|++|++++|++. ....   ...+++++.+|++|++++.++++++|.|
T Consensus         3 ~mmk~vlVtGasg~iG~~~~~~l~~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   77 (221)
T 3r6d_A            3 AMYXYITILGAAGQIAQXLTATLLTY-----TDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVV   77 (221)
T ss_dssp             CSCSEEEEESTTSHHHHHHHHHHHHH-----CCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             ceEEEEEEEeCCcHHHHHHHHHHHhc-----CCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEE
Confidence            355679999999999999999999 7     7999999999865 3210   2367899999999999999999999999


Q ss_pred             eEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCc
Q 016047           98 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNF  177 (396)
Q Consensus        98 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~  177 (396)
                      +|+++..             |+. ++++++++++.+  +.+++++||...|...          ..+..+...  +....
T Consensus        78 v~~ag~~-------------n~~-~~~~~~~~~~~~--~~~iv~iSs~~~~~~~----------~~~~~~~~~--~~~~~  129 (221)
T 3r6d_A           78 FVGAMES-------------GSD-MASIVKALSRXN--IRRVIGVSMAGLSGEF----------PVALEKWTF--DNLPI  129 (221)
T ss_dssp             EESCCCC-------------HHH-HHHHHHHHHHTT--CCEEEEEEETTTTSCS----------CHHHHHHHH--HTSCH
T ss_pred             EEcCCCC-------------Chh-HHHHHHHHHhcC--CCeEEEEeeceecCCC----------Ccccccccc--ccccc
Confidence            9997631             445 899999998764  6788888765444221          000000000  00010


Q ss_pred             chhHHHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047          178 YYTLEDILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       178 ~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      .|...|...+...+..+++++++||+.+++.
T Consensus       130 ~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          130 SYVQGERQARNVLRESNLNYTILRLTWLYND  160 (221)
T ss_dssp             HHHHHHHHHHHHHHHSCSEEEEEEECEEECC
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEechhhcCC
Confidence            2665444433333567899999999999994

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.77  E-value=1.6e-18  Score=158.47  Aligned_cols=230  Identities=13%  Similarity=0.083  Sum_probs=147.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      .....++.++.+|++|+++++++++     
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVR-----YGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999874321      1111268899999999998888776     


Q ss_pred             --cCCCeeEEEEeccCC------C--ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCC
Q 016047           93 --QLTDVTHIFYVTWTN------R--STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~------~--~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                        .+|.|+|+|+.....      .  ++....+++|+.|+.++++++.+.-  .+..+++++||...|       ..   
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-------~~---  159 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF-------TA---  159 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT-------CC---
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeecccc-------CC---
Confidence              678899998753211      1  1346678999999999999887641  135678877653322       21   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                        .         +.....|+..|     +...+..  ...|++++++||+.|+|+..............  .+......+
T Consensus       160 --~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~  226 (278)
T 2bgk_A          160 --G---------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVE--ELAHQAANL  226 (278)
T ss_dssp             --C---------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHH--HHHHHTCSS
T ss_pred             --C---------CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHH--Hhhhccccc
Confidence              0         00112265433     2322221  24689999999999999532221110011100  011111111


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeHHHHHHHHHHH
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKHLWKVLAEQ  293 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~~el~~~l~~~  293 (396)
                         .      ..+   .+..++|+++++++..+  ...|++|++.++..++++|+++.+.+.
T Consensus       227 ---~------~~~---~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          227 ---K------GTL---LRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG  276 (278)
T ss_dssp             ---C------SCC---CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred             ---c------ccc---CCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence               0      112   34455578888777543  345899999999999999999888654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.76  E-value=7.7e-19  Score=158.23  Aligned_cols=224  Identities=14%  Similarity=0.036  Sum_probs=138.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh----cCCCeeEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS----QLTDVTHIF  101 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~~~V~h~a  101 (396)
                      |+||||||+|+||++++++|++     +|++|++++|++....   .   .+.+|++|+++++++++    ++|.|+|+|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~-----~g~~V~~~~r~~~~~~---~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~~A   70 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLAR-----AGHTVIGIDRGQADIE---A---DLSTPGGRETAVAAVLDRCGGVLDGLVCCA   70 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSSSSEE---C---CTTSHHHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHh-----CCCEEEEEeCChhHcc---c---cccCCcccHHHHHHHHHHcCCCccEEEECC
Confidence            5899999999999999999999     8999999999764321   1   26799999998888886    788899998


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCcc-------CCCCC-
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT-------EDMPR-  171 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~-------E~~p~-  171 (396)
                      +.... ..+....+++|+.|+.++++++.+.  ..+..+++++||...|....        ...+..       |+.+. 
T Consensus        71 g~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  141 (255)
T 2dkn_A           71 GVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGA--------AELPMVEAMLAGDEARAIE  141 (255)
T ss_dssp             CCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTG--------GGCHHHHHHHHTCHHHHHH
T ss_pred             CCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccc--------cccchhhhhcccchhhhhh
Confidence            75321 3457788999999999999988765  22357888887655543210        001111       11000 


Q ss_pred             ----CCCCCcchhHHHH-----HHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCc
Q 016047          172 ----LDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK  240 (396)
Q Consensus       172 ----~~~~~~~y~~e~~-----l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~  240 (396)
                          .+.+...|+..|.     +..+..  ...+++++++||+.|+|+..       ..+.. .........  .+.+  
T Consensus       142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~-------~~~~~-~~~~~~~~~--~~~~--  209 (255)
T 2dkn_A          142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL-------QASKA-DPRYGESTR--RFVA--  209 (255)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH-------HHHHH-CTTTHHHHH--SCCC--
T ss_pred             hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh-------hhccc-chhhHHHHH--HHHH--
Confidence                0011223665443     333220  12689999999999999311       00000 000000000  0000  


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeHHH
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKH  285 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~~e  285 (396)
                       ....+.+   .+++|+++++++..+  ...|++||+.++..++++|
T Consensus       210 -~~~~~~~---~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          210 -PLGRGSE---PREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             -TTSSCBC---HHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             -HhcCCCC---HHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence             1123334   444588888877654  3458899999887766653

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.73  E-value=3.7e-17  Score=149.68  Aligned_cols=228  Identities=12%  Similarity=-0.054  Sum_probs=142.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      ++|+||||||+|+||++++++|++     +|++|++++|+.....    ....+++++.+|++|+++++++++       
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVA-----AGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            358999999999999999999999     8999999999864320    012478899999999998887776       


Q ss_pred             cCCCeeEEEEeccCC----C--ccHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 QLTDVTHIFYVTWTN----R--STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                      .+|.|+|+|+.....    .  ++....+++|+.|    +++++..+++.+  ..+++++||...+       .      
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~-------~------  143 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG--SGSVVNISSFGGQ-------L------  143 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEECCGGGT-------C------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEEcCcccc-------C------
Confidence            678899998854321    1  1456678999999    555555555443  5677777643211       1      


Q ss_pred             CCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeecCCCCc--------chhHHHHHHHHHHh
Q 016047          163 PPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSL--------MNLVGALCVYAAVC  227 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~i~  227 (396)
                       +      . + +...|+..|     +...+.  ....|+++.++||+.|.++.-+..        ..+.....   ...
T Consensus       144 -~------~-~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~  211 (281)
T 3m1a_A          144 -S------F-A-GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVG---PTR  211 (281)
T ss_dssp             -C------C-T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHH---HHH
T ss_pred             -C------C-C-CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhH---HHH
Confidence             0      0 1 122366433     332222  123689999999999987432110        01111110   000


Q ss_pred             hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhC
Q 016047          228 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFG  295 (396)
Q Consensus       228 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g  295 (396)
                      . .    ......      ....+++++|+++++++..+ ..+..||++++....+.+....+.+.++
T Consensus       212 ~-~----~~~~~~------~~~~~~~dva~a~~~~~~~~-~~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          212 Q-L----VQGSDG------SQPGDPAKAAAAIRLALDTE-KTPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             H-H----HHC-----------CBCHHHHHHHHHHHHHSS-SCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             H-H----HhhccC------CCCCCHHHHHHHHHHHHhCC-CCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            0 0    001111      12234555688888887664 4567899998777777777777776554

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.72  E-value=5.5e-17  Score=144.99  Aligned_cols=208  Identities=15%  Similarity=0.100  Sum_probs=134.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh------cCCCe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS------QLTDV   97 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~~~V   97 (396)
                      |+|+||||||+|+||++++++|++     +|++|++++|++..     .++.++.+|++|+++++++++      .+|.|
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKA-----RGYRVVVLDLRREG-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----HTCEEEEEESSCCS-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEccCccc-----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            468999999999999999999999     89999999998651     467899999999999888887      56778


Q ss_pred             eEEEEeccCCC------c----cHHHHHHhHHHHHHHHHHHHcccCCC--------cceEEEeccceeecccccccccCC
Q 016047           98 THIFYVTWTNR------S----TEAENCKINGSMFRNVLRAVIPNAPN--------LRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        98 ~h~a~~~~~~~------~----~~~~~~~~nv~gt~~ll~a~~~~~~~--------~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                      +|+|+......      .    +....+++|+.++.++++++.+...+        ..+++++||...|..         
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------  141 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG---------  141 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC---------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC---------
Confidence            88877532211      1    45677899999999999988765111        237887765433211         


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                         .         + ....|+..|     +.....  ....|++++++||+.|+++......   ..+.  ..+..  ..
T Consensus       142 ---~---------~-~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~--~~~~~--~~  201 (242)
T 1uay_A          142 ---Q---------I-GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---EKAK--ASLAA--QV  201 (242)
T ss_dssp             ---C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---HHHH--HHHHT--TC
T ss_pred             ---C---------C-CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc---hhHH--HHHHh--hC
Confidence               0         0 112265433     222221  1345899999999999994211111   1110  00111  12


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCee
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVF  281 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~  281 (396)
                      |  +++      .   ..+.+++|+++++++..+...|+.|++.++..+
T Consensus       202 ~--~~~------~---~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          202 P--FPP------R---LGRPEEYAALVLHILENPMLNGEVVRLDGALRM  239 (242)
T ss_dssp             C--SSC------S---CCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             C--Ccc------c---CCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeec
Confidence            2  111      1   233455688888877665567899999887544

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.72  E-value=3.3e-17  Score=147.67  Aligned_cols=215  Identities=12%  Similarity=0.075  Sum_probs=136.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|+++++++++    
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFAT-----AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHT-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 012467889999999998888776    


Q ss_pred             ---cCCCeeEEEEeccCC---C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 ---QLTDVTHIFYVTWTN---R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~---~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                         ++|.|+|+|+.....   .  .+....+++|+.|+.++++++.+.  ..+..+++++||...|       ..     
T Consensus        85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-----  152 (255)
T 1fmc_A           85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE-------NK-----  152 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------CC-----
T ss_pred             hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc-------CC-----
Confidence               788899998754321   1  145677899999999999988632  1125677777643222       11     


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCce
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLR  235 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~  235 (396)
                      .         + +...|+.     +.+...+.  ....++++.++||+.++++......  ...+..  ...  .+.|+.
T Consensus       153 ~---------~-~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~--~~~--~~~~~~  216 (255)
T 1fmc_A          153 N---------I-NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--TPEIEQ--KML--QHTPIR  216 (255)
T ss_dssp             C---------T-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--CHHHHH--HHH--HTCSSC
T ss_pred             C---------C-CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc--ChHHHH--HHH--hcCCcc
Confidence            0         0 1123654     33332222  1346899999999999984211110  111100  011  122211


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeeeH
Q 016047          236 FPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKW  283 (396)
Q Consensus       236 ~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s~  283 (396)
                               .+.   +..++|+++++++..+.  ..|++||+.++..+|+
T Consensus       217 ---------~~~---~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          217 ---------RLG---QPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             ---------SCB---CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             ---------cCC---CHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence                     122   34455777777775432  3588999999887765

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.71  E-value=1.6e-17  Score=153.71  Aligned_cols=228  Identities=16%  Similarity=0.067  Sum_probs=142.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------C--CCCCeeEEEecCCChHHHHHHHhcC-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------N--ADHLVEYVQCDVSDPEETQAKLSQL-   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~Dl~d~~~~~~~~~~~-   94 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|++....      .  ...++.++.+|++|+++++++++.+ 
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSS-----LGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     8999999999753210      0  0246889999999999888777654 


Q ss_pred             ------CCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCC
Q 016047           95 ------TDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        95 ------~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                            |.|+|+|+.....      ..+....+++|+.|+.++++++.+.   ..+..+++++||...+..         
T Consensus       100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~---------  170 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG---------  170 (302)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC---------
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC---------
Confidence                  8899998753221      1145678899999999998887653   123467777765322210         


Q ss_pred             CCCCCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCC-CcchhHHHHHHHHHHhhhcC
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPY-SLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~i~~~~~  231 (396)
                         .         + ....|+.     +.+...+..  ...|++++++||+.|+++... .........   ..+..  .
T Consensus       171 ---~---------~-~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~--~  232 (302)
T 1w6u_A          171 ---S---------G-FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFE---KEMIG--R  232 (302)
T ss_dssp             ---C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHH---HHHHT--T
T ss_pred             ---C---------C-CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhH---HHHHh--c
Confidence               0         1 1122554     333332221  236899999999999984211 111000000   00011  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeeeHHHHHHHHHHHhC
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFKWKHLWKVLAEQFG  295 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s~~el~~~l~~~~g  295 (396)
                      .|+   +      .+   .+..++|.++++++..+.  ..|++|++.++..++++++++.+.+..|
T Consensus       233 ~p~---~------~~---~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          233 IPC---G------RL---GTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             CTT---S------SC---BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             CCc---C------CC---CCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            121   1      12   234555778777775432  3588999999888888877776665443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.71  E-value=4.8e-16  Score=140.57  Aligned_cols=209  Identities=15%  Similarity=0.158  Sum_probs=134.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~   96 (396)
                      ++|+||||||+|+||.+++++|++     +|++|++++|+....  ...++.++.+|++|+++++++++       .+|.
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRD-----RNYRVVATSRSIKPS--ADPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSCCCC--SSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChhhc--ccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            358999999999999999999999     899999999986543  22478899999999998887776       6888


Q ss_pred             eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      ++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||..       .+...          
T Consensus       100 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-------~~~~~----------  162 (260)
T 3un1_A          100 LVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSL-------VDQPM----------  162 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTT-------TTSCB----------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechh-------hccCC----------
Confidence            999987543221      145677899999999999987432  11246777666422       11100          


Q ss_pred             CCCCCCCCcchhHH-----HHHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCcc
Q 016047          169 MPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKA  241 (396)
Q Consensus       169 ~p~~~~~~~~y~~e-----~~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~  241 (396)
                       +  ..+...|+..     .+...+.  ....|+++.+++|+.|.++  .........+      .  ...|+.      
T Consensus       163 -~--~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~--~~~~~~~~~~------~--~~~p~~------  223 (260)
T 3un1_A          163 -V--GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTP--MHPAETHSTL------A--GLHPVG------  223 (260)
T ss_dssp             -T--TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCT--TSCGGGHHHH------H--TTSTTS------
T ss_pred             -C--CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCC--CCCHHHHHHH------h--ccCCCC------
Confidence             0  0112236532     2222221  1345899999999999994  2211111111      1  111211      


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCee
Q 016047          242 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVF  281 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~  281 (396)
                         .   ..+..++|.+++++.......|++|++.+|...
T Consensus       224 ---r---~~~~~dva~av~~L~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          224 ---R---MGEIRDVVDAVLYLEHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             ---S---CBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred             ---C---CcCHHHHHHHHHHhcccCCCCCcEEEECCCeec
Confidence               1   223445577777775455567899999887543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.70  E-value=2.5e-17  Score=150.63  Aligned_cols=230  Identities=13%  Similarity=0.074  Sum_probs=132.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      ++|+||||||+|+||.+++++|++     +|++|++++|++...          .....++.++.+|++|+++++++++ 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAR-----EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST   79 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHH
Confidence            457999999999999999999999     899999999975311          0112367889999999998888776 


Q ss_pred             ------cCCCeeEEEEeccC----------CCccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccc
Q 016047           93 ------QLTDVTHIFYVTWT----------NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEA  154 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~----------~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~  154 (396)
                            ++|.++|+|+....          ..++....+++|+.|+.++++++.+.  ..+ .+++++||...+      
T Consensus        80 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~------  152 (278)
T 1spx_A           80 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASG------  152 (278)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSS------
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccc------
Confidence                  78889999875322          11134567899999999999988764  112 577777643210      


Q ss_pred             cccCCCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHH---HH-H
Q 016047          155 FGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGAL---CV-Y  223 (396)
Q Consensus       155 ~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~---~~-~  223 (396)
                      +..     .         + ....|+..|.     .....  ....|++++++||+.|.++............   .. .
T Consensus       153 ~~~-----~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  217 (278)
T 1spx_A          153 LHA-----T---------P-DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTM  217 (278)
T ss_dssp             SSC-----C---------T-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHH
T ss_pred             ccC-----C---------C-CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHH
Confidence            110     0         1 1122654322     22211  0346899999999999984211100000000   00 0


Q ss_pred             HHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC---CCCceeeecCCCeeeHHHHHHHHHHHh
Q 016047          224 AAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY---AKNEAFNCNNGDVFKWKHLWKVLAEQF  294 (396)
Q Consensus       224 ~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~---~~g~~~ni~~~~~~s~~el~~~l~~~~  294 (396)
                      ..+..  ..|+   +      .   ..+..++|..+++++..+.   ..|++|++.++...++.|+++.+.+.+
T Consensus       218 ~~~~~--~~p~---~------~---~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          218 ATMKE--CVPA---G------V---MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHHHH--HCTT---S------S---CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             HHHHh--cCCC---c------C---CCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            00111  1111   1      1   2344555777777765432   458999999988999999999987754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.68  E-value=2.2e-16  Score=141.85  Aligned_cols=211  Identities=15%  Similarity=0.062  Sum_probs=131.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      |+|+||||||+|+||++++++|++     +|++|++++|++...        .....++.++.+|++|+++++++++   
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLA-----RGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATM   75 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321        0012468899999999998887776   


Q ss_pred             ----cCCCeeEEEEeccCCC---------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047           93 ----QLTDVTHIFYVTWTNR---------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~---------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                          ++|.|+|+|+......         ++....+++|+.|+.++++++.+.  ..+..+++++||...+       ..
T Consensus        76 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~~  148 (250)
T 2cfc_A           76 EQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASL-------VA  148 (250)
T ss_dssp             HHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------SC
T ss_pred             HHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhc-------cC
Confidence                6888999987533211         135667899999998777766543  1125678877643221       10


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhH-HHHHHHHHHhhh
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAAVCKH  229 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~i~~~  229 (396)
                           .         + ....|+..|     +...+..  ...+++++++||+.|+++  ....... ..+.  ..+.. 
T Consensus       149 -----~---------~-~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~--~~~~~~~~~~~~--~~~~~-  208 (250)
T 2cfc_A          149 -----F---------P-GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETP--MTQWRLDQPELR--DQVLA-  208 (250)
T ss_dssp             -----C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCST--TTHHHHTSHHHH--HHHHT-
T ss_pred             -----C---------C-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccC--ccccccCCHHHH--HHHHh-
Confidence                 0         1 112265432     2322220  245899999999999993  2211010 1110  00111 


Q ss_pred             cCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          230 EGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       230 ~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                       ..|+   +      .   ..+..++|.++++++..+.  ..|+++++.++.
T Consensus       209 -~~~~---~------~---~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          209 -RIPQ---K------E---IGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             -TCTT---C------S---CBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             -cCCC---C------C---CcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence             1121   0      1   2344556888888776543  348889987653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.67  E-value=5.6e-17  Score=141.42  Aligned_cols=150  Identities=18%  Similarity=0.089  Sum_probs=106.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC-CCCCeeEEEecCCChHHHHHHHh---cCCCeeE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQAKLS---QLTDVTH   99 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~~~~~~~---~~~~V~h   99 (396)
                      |+||||||+|+||++++++|++     +  +|++++|++...  .. .... +++.+|++|++++.++++   ++|.|+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~-----~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKG-----H--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTT-----S--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHh-----C--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEE
Confidence            5899999999999999999998     6  899999975321  00 0011 788999999999999888   7888999


Q ss_pred             EEEeccC------CCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047          100 IFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus       100 ~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      +|+....      ...+....+++|+.|+.++++++++.  +..+++++||...|...                     +
T Consensus        73 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~sS~~~~~~~---------------------~  129 (207)
T 2yut_A           73 AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ--KGARAVFFGAYPRYVQV---------------------P  129 (207)
T ss_dssp             CCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE--EEEEEEEECCCHHHHSS---------------------T
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc--CCcEEEEEcChhhccCC---------------------C
Confidence            9875322      11245678899999999999999654  36788877754333110                     0


Q ss_pred             CCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceee
Q 016047          174 APNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       174 ~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                       +...|+.     +.+...+..  ...|++++++||+.+++
T Consensus       130 -~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t  169 (207)
T 2yut_A          130 -GFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVAT  169 (207)
T ss_dssp             -TBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCS
T ss_pred             -CcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccC
Confidence             1122654     333333221  24689999999999998

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.67  E-value=1.4e-16  Score=144.39  Aligned_cols=216  Identities=13%  Similarity=0.061  Sum_probs=130.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCC--------CCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNA--------DHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~--------~~~v~~~~~Dl~d~~~~~~   89 (396)
                      ++|+||||||+|+||.+++++|++     +|++|++++|+....      ...        ..++.++.+|++|++++.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAG-----EGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            357999999999999999999999     899999999975321      100        1467899999999998887


Q ss_pred             HHhcC--------CCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccCC--C-cceEEEeccceeecccc
Q 016047           90 KLSQL--------TDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAP--N-LRHVCLQTGTKHYLGPF  152 (396)
Q Consensus        90 ~~~~~--------~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~--~-~~~~~~~s~~~~y~ss~  152 (396)
                      +++.+        |.|+|+|+.....      .++....+++|+.|+.++++++.+...  + ..+++++||...+    
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----  156 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGK----  156 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH----
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhc----
Confidence            77664        8899998754321      114567789999999999998876511  1 3577777653221    


Q ss_pred             cccccCCCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHH
Q 016047          153 EAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA  225 (396)
Q Consensus       153 ~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  225 (396)
                        ++      .         + ....|+..|.     ...+.  ....|++++++||+.++++....   ....+  ...
T Consensus       157 --~~------~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~--~~~  213 (264)
T 2pd6_A          157 --VG------N---------V-GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK---VPQKV--VDK  213 (264)
T ss_dssp             --HC------C---------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---------------C
T ss_pred             --cC------C---------C-CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh---cCHHH--HHH
Confidence              11      0         0 1123664333     22221  12468999999999999942111   00000  000


Q ss_pred             HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeHHH
Q 016047          226 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKH  285 (396)
Q Consensus       226 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~~e  285 (396)
                      +.  ...|+            ....+.+++|+.+++++..+  ...|+.+++.++..++...
T Consensus       214 ~~--~~~~~------------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          214 IT--EMIPM------------GHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             TG--GGCTT------------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             HH--HhCCC------------CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence            00  01110            11234455677777776542  3458899998877665543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.66  E-value=5.4e-16  Score=134.65  Aligned_cols=143  Identities=13%  Similarity=0.111  Sum_probs=101.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc---CCCeeEEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ---LTDVTHIFY  102 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~h~a~  102 (396)
                      |+||||||+|+||++++++|+ .     |++|++++|++.          .+.+|++|+++++++++.   +|.|+|+|+
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~-----g~~V~~~~r~~~----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-K-----KAEVITAGRHSG----------DVTVDITNIDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-T-----TSEEEEEESSSS----------SEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-C-----CCeEEEEecCcc----------ceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence            479999999999999999998 3     789999999743          478999999999888876   688999987


Q ss_pred             eccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCC
Q 016047          103 VTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  176 (396)
Q Consensus       103 ~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~  176 (396)
                      ......      .+....+++|+.++.++++++.+...+-.+++++||..       .+.       +.       + ..
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~-------~~~-------~~-------~-~~  125 (202)
T 3d7l_A           68 SATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIM-------MED-------PI-------V-QG  125 (202)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGG-------GTS-------CC-------T-TC
T ss_pred             CCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchh-------hcC-------CC-------C-cc
Confidence            432211      13356679999999999999987521125666665321       111       00       1 11


Q ss_pred             cchhH-----HHHHHHHhhcC--CCeeEEEEcCCceee
Q 016047          177 FYYTL-----EDILFEEVEKK--EELSWSVHRPDTIFG  207 (396)
Q Consensus       177 ~~y~~-----e~~l~~~~~~~--~~~~~~ilRp~~v~G  207 (396)
                      ..|+.     |.+...+. .+  .+++++++||+.+++
T Consensus       126 ~~Y~~sK~~~~~~~~~~~-~e~~~gi~v~~v~pg~v~~  162 (202)
T 3d7l_A          126 ASAAMANGAVTAFAKSAA-IEMPRGIRINTVSPNVLEE  162 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHT-TSCSTTCEEEEEEECCBGG
T ss_pred             HHHHHHHHHHHHHHHHHH-HHccCCeEEEEEecCccCC
Confidence            22554     44444433 33  489999999999999

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.66  E-value=1e-16  Score=145.00  Aligned_cols=222  Identities=16%  Similarity=0.085  Sum_probs=133.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|+||||||+|+||++++++|++     +|++|++++|+.....    ....++.++.+|++|+++++++++       .
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVR-----EGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999     8999999999753210    012467899999999998888776       6


Q ss_pred             CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCCCCCCC
Q 016047           94 LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      +|.++|+|+......      ++....+++|+.|+.++++++.+..   .+-.+++++||...+      ++      . 
T Consensus        83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~------~-  149 (259)
T 4e6p_A           83 LDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR------RG------E-  149 (259)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------SC------C-
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc------cC------C-
Confidence            788999988533211      1456678999999999999887541   113467766643221      11      0 


Q ss_pred             ccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhc-CCCcee
Q 016047          165 FTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE-GIPLRF  236 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~  236 (396)
                              + ....|+..|     +...+.  ....|+++.+++|+.|++  +....  ...+  +....... ......
T Consensus       150 --------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t--~~~~~--~~~~--~~~~~~~~~~~~~~~  214 (259)
T 4e6p_A          150 --------A-LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDG--EHWDG--VDAL--FARYENRPRGEKKRL  214 (259)
T ss_dssp             --------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCS--TTHHH--HHHH--HHHHHTCCTTHHHHH
T ss_pred             --------C-CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCcc--chhhh--hhhh--hhhhccCChHHHHHH
Confidence                    1 112265422     222221  134589999999999999  32110  0000  00000000 000000


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeee
Q 016047          237 PGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK  282 (396)
Q Consensus       237 ~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s  282 (396)
                      .+.......+.+   ..++|.++++++...  ...|++|++.+|..+|
T Consensus       215 ~~~~~p~~r~~~---~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          215 VGEAVPFGRMGT---AEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHSTTSSCBC---THHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HhccCCCCCCcC---HHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            111111122333   344578877776532  2348999998876543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.66  E-value=3.8e-16  Score=142.91  Aligned_cols=230  Identities=14%  Similarity=0.097  Sum_probs=146.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      +|+||||||+|+||++++++|++     +|++|++++|+....         . ....++.++.+|++|+++++++++  
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVA-----AGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            58999999999999999999999     899999999975321         0 011267899999999998877765  


Q ss_pred             -----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccC
Q 016047           93 -----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                           .+|.++|+|+......       ++....+++|+.|+.++++++.+..  .+-.+++++||...+..        
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  157 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT--------  157 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC--------
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC--------
Confidence                 4688999987522111       1346688999999999999887651  12346777765332211        


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcC
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  231 (396)
                          .         + ....|+..|     +...+.  ....++++.+++|+.|.++........ ...  ......  .
T Consensus       158 ----~---------~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~--~~~~~~--~  218 (281)
T 3svt_A          158 ----H---------R-WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES-AEL--SSDYAM--C  218 (281)
T ss_dssp             ----C---------T-TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-HHH--HHHHHH--H
T ss_pred             ----C---------C-CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC-HHH--HHHHHh--c
Confidence                0         0 012265422     222221  134579999999999988321100000 000  000011  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeee-HHHHHHHHHHHhCCCC
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFK-WKHLWKVLAEQFGIED  298 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s-~~el~~~l~~~~g~~~  298 (396)
                      .|+.            ...+..++|.++++++....  ..|++|++.+|...+ ..++.+.+.+.+|.+.
T Consensus       219 ~p~~------------r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          219 TPLP------------RQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             CSSS------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             CCCC------------CCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            1211            12234555788777775432  358999998888776 7889999999888654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.66  E-value=6e-17  Score=145.01  Aligned_cols=211  Identities=11%  Similarity=0.036  Sum_probs=131.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-CCCCCeeEEEecCCChHHHHHHHhc---CCCee
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQ---LTDVT   98 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~   98 (396)
                      +|+||||||+|+||++++++|++     +|++|++++|++...  . ....+++++.+|++|+++++++++.   +|.|+
T Consensus         7 ~~~vlVTGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            7 GLRALVTGAGKGIGRDTVKALHA-----SGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence            57999999999999999999999     899999999975321  0 0013577889999999999998874   57789


Q ss_pred             EEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CC-cceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           99 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PN-LRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        99 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~-~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                      |+|+......      ++....+++|+.|+.++++++.+..  .+ ..+++++||...|       ..     .      
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-----~------  143 (244)
T 1cyd_A           82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH-------VT-----F------  143 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------SC-----C------
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhc-------CC-----C------
Confidence            9887432211      1346678999999999999887641  12 4678877653322       21     0      


Q ss_pred             CCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          170 PRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       170 p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                         + ....|+.     +.+...+..  ...++++.++||+.++++....... ...+.  ..+.+  +.|+        
T Consensus       144 ---~-~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~--~~~~~--~~~~--------  206 (244)
T 1cyd_A          144 ---P-NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA-DPEFA--RKLKE--RHPL--------  206 (244)
T ss_dssp             ---T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC-CHHHH--HHHHH--HSTT--------
T ss_pred             ---C-CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc-CHHHH--HHHHh--cCCc--------
Confidence               0 1122654     333333221  2358999999999999942110000 01110  00111  1111        


Q ss_pred             cceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          243 WECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                       ..+.+   .+++|+++++++..+  ...|+.+++.++.
T Consensus       207 -~~~~~---~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          207 -RKFAE---VEDVVNSILFLLSDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             -SSCBC---HHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred             -cCCCC---HHHHHHHHHHHhCchhhcccCCEEEECCCc
Confidence             12333   444578888777543  2347888887764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.65  E-value=9.3e-16  Score=141.09  Aligned_cols=229  Identities=14%  Similarity=0.045  Sum_probs=139.4

Q ss_pred             cccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHH
Q 016047           14 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        14 ~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      .|...+.+...+|+||||||+|+||.+++++|++     +|++|++++|+....    .....++.++.+|++|++++++
T Consensus         5 ~~~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~   79 (291)
T 3rd5_A            5 GWTAADLPSFAQRTVVITGANSGLGAVTARELAR-----RGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRR   79 (291)
T ss_dssp             CCCGGGCCCCTTCEEEEECCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHH
T ss_pred             CCChhhccCCCCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHH
Confidence            3554455555678999999999999999999999     899999999985321    0012478899999999999999


Q ss_pred             HHhc---CCCeeEEEEeccCC----CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047           90 KLSQ---LTDVTHIFYVTWTN----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        90 ~~~~---~~~V~h~a~~~~~~----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                      +++.   +|.++|+|+.....    .++....+++|+.|+.++++++....  .++++++||...|.+.      . ...
T Consensus        80 ~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~--~~riv~isS~~~~~~~------~-~~~  150 (291)
T 3rd5_A           80 FADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL--TDRVVTVSSMAHWPGR------I-NLE  150 (291)
T ss_dssp             HHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE--EEEEEEECCGGGTTCC------C-CSS
T ss_pred             HHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HhheeEeechhhccCC------C-Ccc
Confidence            8885   46688887754322    22456789999999999999998763  3478888765444221      0 001


Q ss_pred             CCccCCCCCCCCCCcchhHHHHH-----HHHhh--cCCC--eeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhc-CC
Q 016047          163 PPFTEDMPRLDAPNFYYTLEDIL-----FEEVE--KKEE--LSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE-GI  232 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~~l-----~~~~~--~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~-~~  232 (396)
                      ....+..+..+  ...|+..|..     ..+..  ...+  +++..++|+.|..+.....   ...+      .... ..
T Consensus       151 ~~~~~~~~~~~--~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~---~~~~------~~~~~~~  219 (291)
T 3rd5_A          151 DLNWRSRRYSP--WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS---GRKL------GDALMSA  219 (291)
T ss_dssp             CTTCSSSCCCH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------
T ss_pred             cccccccCCCC--cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc---chHH------HHHHHHH
Confidence            11111122111  2236643332     11110  2234  9999999999977321110   0000      0000 00


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCC
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNG  278 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~  278 (396)
                      +..           .-..+...+|..+++++..+...|+.|++.++
T Consensus       220 ~~~-----------~~~~~~~~~A~~~~~l~~~~~~~G~~~~vdgG  254 (291)
T 3rd5_A          220 ATR-----------VVATDADFGARQTLYAASQDLPGDSFVGPRFG  254 (291)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHSCCCTTCEEEETTS
T ss_pred             HHH-----------HHhCCHHHHHHHHHHHHcCCCCCCceeCCccc
Confidence            100           01123455688888888776666787777653

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.65  E-value=4.8e-16  Score=143.81  Aligned_cols=156  Identities=13%  Similarity=0.008  Sum_probs=107.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C------CCCCCeeEEEecCCChHHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W------NADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~------~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      .      ....++.++.+|++|++++.+++
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLE-----LGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            358999999999999999999999     899999999975311      0      01247889999999999888777


Q ss_pred             hc-------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccc
Q 016047           92 SQ-------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        92 ~~-------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                      +.       +|.|+|+|+......      .+....+++|+.|+.++++++....  ....+++++||.. +      ++
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~------~~  164 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-K------AG  164 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-T------TC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-c------cC
Confidence            64       788999987432211      1346678999999999999876521  1135677665322 1      11


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                            .         +. ...|+.        .+.+.+.+ ...|++++++||+.|+|+
T Consensus       165 ------~---------~~-~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~  207 (303)
T 1yxm_A          165 ------F---------PL-AVHSGAARAGVYNLTKSLALEW-ACSGIRINCVAPGVIYSQ  207 (303)
T ss_dssp             ------C---------TT-CHHHHHHHHHHHHHHHHHHHHT-GGGTEEEEEEEECSBCCT
T ss_pred             ------C---------Cc-chhhHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCCcccc
Confidence                  0         11 112443        23333332 345899999999999994

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.65  E-value=6.2e-16  Score=139.10  Aligned_cols=204  Identities=9%  Similarity=-0.002  Sum_probs=128.9

Q ss_pred             CcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC----
Q 016047           19 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL----   94 (396)
Q Consensus        19 ~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~----   94 (396)
                      +..+.|+|+||||||+|+||.+++++|++     +|++|++++|+....     .-..+.+|++|.++++++++.+    
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~-----~G~~V~~~~r~~~~~-----~~~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKS-----KSWNTISIDFRENPN-----ADHSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCTT-----SSEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCcccc-----cccceEEEeCCHHHHHHHHHHHHHHc
Confidence            34567889999999999999999999999     899999999986542     2246789999999888777653    


Q ss_pred             ---CCeeEEEEeccCC---Cc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           95 ---TDVTHIFYVTWTN---RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        95 ---~~V~h~a~~~~~~---~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                         |.|+|+|+.....   ..    +....+++|+.|+.++++++.....+-.+++++||...+.      +      . 
T Consensus        86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~------~-  152 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN------R------T-  152 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------C------C-
T ss_pred             CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc------C------C-
Confidence               6688887743211   11    4566789999999999998876522223677666432211      1      0 


Q ss_pred             ccCCCCCCCCCCcchhHH-----HHHHHHhhc----CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCce
Q 016047          165 FTEDMPRLDAPNFYYTLE-----DILFEEVEK----KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLR  235 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e-----~~l~~~~~~----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~  235 (396)
                              + ....|+..     .+...+..+    ..++++.+++|+.|..+       +...+      .  ...+  
T Consensus       153 --------~-~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~-------~~~~~------~--~~~~--  206 (251)
T 3orf_A          153 --------S-GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP-------TNRKY------M--SDAN--  206 (251)
T ss_dssp             --------T-TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH-------HHHHH------C--TTSC--
T ss_pred             --------C-CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc-------chhhh------c--cccc--
Confidence                    1 12236643     333333212    36799999999988772       11101      0  0111  


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHHhcC---CCCCCceeeecCCCee
Q 016047          236 FPGTKAAWECYSIASDADLIAEHQIWAAVD---PYAKNEAFNCNNGDVF  281 (396)
Q Consensus       236 ~~g~~~~~~~~~~~~da~~la~~~i~~~~~---~~~~g~~~ni~~~~~~  281 (396)
                             ...   ..+..++|+.+++++..   ....|+++++.+++..
T Consensus       207 -------~~~---~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          207 -------FDD---WTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             -------GGG---SBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             -------ccc---cCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence                   112   23345568888887766   3456889998876543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.65  E-value=1.5e-15  Score=137.17  Aligned_cols=212  Identities=16%  Similarity=0.084  Sum_probs=131.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|+||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++     
T Consensus        13 ~k~vlItGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAE-----AGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999975321      0 012468899999999998887775     


Q ss_pred             --cCCCeeEEEEecc-CC----Cc--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 --QLTDVTHIFYVTW-TN----RS--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 --~~~~V~h~a~~~~-~~----~~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                        .+|.|+|+|+... ..    .+  +....+++|+.|+.++++++.+.  ..+..+++++||..         +..   
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~---------~~~---  155 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMS---------GLI---  155 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG---------GTS---
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecch---------hcc---
Confidence              5788999987543 11    11  34667899999999999988653  11246777766422         210   


Q ss_pred             CCCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhH-HHHHHHHHHhhhcCCC
Q 016047          162 DPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAAVCKHEGIP  233 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~i~~~~~~~  233 (396)
                      ..      +..+  ...|+..|     +...+..  ...+++++++||+.|+++  ....... ..+.  ..+..  ..|
T Consensus       156 ~~------~~~~--~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~--~~~~~~~~~~~~--~~~~~--~~~  221 (260)
T 3awd_A          156 VN------RPQQ--QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETT--LTRFGMEKPELY--DAWIA--GTP  221 (260)
T ss_dssp             CC------SSSC--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCT--TTHHHHTCHHHH--HHHHH--TCT
T ss_pred             cC------CCCC--ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccc--hhhcccCChHHH--HHHHh--cCC
Confidence            00      1111  12366433     3332221  236899999999999993  2210110 1110  00111  222


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                      +   +      .+.   +..++|+++++++..+  ...|++|++.++.
T Consensus       222 ~---~------~~~---~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          222 M---G------RVG---QPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             T---S------SCB---CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             c---C------CCC---CHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            1   0      122   3344577777776532  3458899998764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.65  E-value=3.3e-16  Score=141.30  Aligned_cols=211  Identities=15%  Similarity=0.113  Sum_probs=130.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC-CCCCC-------CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR-PKPNW-------NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~-~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|+ +....       ....++.++.+|++|+++++++++   
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFAR-----AGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFV   80 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            357999999999999999999999     89999999998 43210       012468899999999998888777   


Q ss_pred             ----cCCCeeEEEEe-ccCC----C--ccHHHHHHhHHHHHHHHHHHHcccC-------CCcceEEEeccceeecccccc
Q 016047           93 ----QLTDVTHIFYV-TWTN----R--STEAENCKINGSMFRNVLRAVIPNA-------PNLRHVCLQTGTKHYLGPFEA  154 (396)
Q Consensus        93 ----~~~~V~h~a~~-~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~-------~~~~~~~~~s~~~~y~ss~~~  154 (396)
                          ++|.|+|+|+. ....    .  +.....+++|+.|+.++++++.+.-       ....+++++||...+..    
T Consensus        81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----  156 (258)
T 3afn_B           81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG----  156 (258)
T ss_dssp             HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----
T ss_pred             HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----
Confidence                78889999874 2111    1  1345678999999999988775431       01156776664322110    


Q ss_pred             cccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHh
Q 016047          155 FGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC  227 (396)
Q Consensus       155 ~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~  227 (396)
                       +              . + +...|+.     +.+...+.  ....+++++++||+.++++......   ..+..  .+.
T Consensus       157 -~--------------~-~-~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~--~~~  214 (258)
T 3afn_B          157 -G--------------G-P-GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT---QDVRD--RIS  214 (258)
T ss_dssp             -C--------------C-T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC---HHHHH--HHH
T ss_pred             -C--------------C-C-CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC---HHHHH--HHh
Confidence             0              0 1 1122654     33333222  1245899999999999994322111   11100  011


Q ss_pred             hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC---CCCCceeeecCCC
Q 016047          228 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP---YAKNEAFNCNNGD  279 (396)
Q Consensus       228 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~---~~~g~~~ni~~~~  279 (396)
                      .  +.|+         ..+.++.|+   |+++++++..+   ...|++|++.++.
T Consensus       215 ~--~~~~---------~~~~~~~dv---a~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          215 N--GIPM---------GRFGTAEEM---APAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             T--TCTT---------CSCBCGGGT---HHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             c--cCCC---------CcCCCHHHH---HHHHHHHhCcchhccccCCEEeECCCc
Confidence            1  2221         123444554   66666666432   2358899998764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.64  E-value=1.3e-15  Score=137.90  Aligned_cols=157  Identities=15%  Similarity=0.045  Sum_probs=108.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-C-CCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-A-DHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~-~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|++...      .. . ..++.++.+|++|+++++++++    
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAK-----EGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999975321      00 0 2468899999999998887776    


Q ss_pred             ---cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         ++|.|+|+|+.....      .++....+++|+.|+.++++++...  ..+..+++++||...|       ..    
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~----  150 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAV-------QP----  150 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------SC----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhc-------CC----
Confidence               688899998754321      1145667899999999998887543  1125678877653322       11    


Q ss_pred             CCCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                       .         + ....|+..|     +...+..  ...|+++.++||+.|+++
T Consensus       151 -~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  193 (263)
T 3ai3_A          151 -L---------W-YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTP  193 (263)
T ss_dssp             -C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred             -C---------C-CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence             0         1 112255422     2222210  346899999999999993

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.64  E-value=2.1e-15  Score=135.45  Aligned_cols=211  Identities=15%  Similarity=0.055  Sum_probs=129.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...      .....+++++.+|++|++++.++++.    
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVE-----EGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            357999999999999999999999     899999999975321      11114788999999999988877764    


Q ss_pred             ---CCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEeccceeecccccccccCCCC
Q 016047           94 ---LTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         +|.|+|+|+.....    .  ++....+++|+.|+.++.+++...  ..+. .+++++||...|       ..    
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~~----  148 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF-------VG----  148 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT-------SC----
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhc-------cC----
Confidence               78899998753221    1  134667899999887766655432  1124 678877643222       10    


Q ss_pred             CCCccCCCCCCCCCCcchhHHH-----HHHHHhh--c--CCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          162 DPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--K--KEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~--~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                       .         + ....|+..|     +...+..  .  ..+++++++||+.++++.....   .... .    ......
T Consensus       149 -~---------~-~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~---~~~~-~----~~~~~~  209 (251)
T 1zk4_A          149 -D---------P-SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL---PGAE-E----AMSQRT  209 (251)
T ss_dssp             -C---------T-TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS---TTHH-H----HHTSTT
T ss_pred             -C---------C-CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc---Cchh-h----hHHHhh
Confidence             0         1 112365433     2222211  1  6789999999999998421111   0000 0    000111


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                      ..  +     ...   ..+..++|..+++++..+.  ..|++|++.++.
T Consensus       210 ~~--~-----~~~---~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          210 KT--P-----MGH---IGEPNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             TC--T-----TSS---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cC--C-----CCC---CcCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            00  1     011   2344555787777775432  358899998764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.63  E-value=2.6e-15  Score=136.18  Aligned_cols=157  Identities=13%  Similarity=0.078  Sum_probs=103.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHH------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL------   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~------   91 (396)
                      +|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|++++++++      
T Consensus        14 ~k~vlITGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           14 AKTVLVTGGTKGIGHAIVEEFAG-----FGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999975321      0 01236789999999998887766      


Q ss_pred             --hcCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           92 --SQLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        92 --~~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                        ..+|.|+|+|+.....      .++....+++|+.|+.++++++...  ..+..+++++||...+..           
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  157 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-----------  157 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC-----------
Confidence              4578899998753221      1144667899999999999988432  112567787765332210           


Q ss_pred             CCCccCCCCCCCCCCcchhHH-----HHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTLE-----DILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e-----~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                       .         + ....|+..     .+...+..  ...|++++++||+.++++
T Consensus       158 -~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  200 (266)
T 1xq1_A          158 -A---------S-VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATP  200 (266)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--
T ss_pred             -C---------C-CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccc
Confidence             0         0 11226543     22222210  235899999999999994

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.63  E-value=6.4e-16  Score=140.01  Aligned_cols=217  Identities=12%  Similarity=0.106  Sum_probs=131.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--------CCCCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------ADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      ++|+||||||+|+||++++++|++     +|++|++++|+......        ...++.++.+|++|+++++++++.  
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAA-----AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHH-----TTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            357899999999999999999999     89999999996543100        024688999999999988777664  


Q ss_pred             -----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCC
Q 016047           94 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                           +|.|+|+|+......      ++....+++|+.|+.++++++.+..   ....+++++||...+.      +.  
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~--  159 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQI------IN--  159 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------CC--
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhc------cc--
Confidence                 566888876432211      1345678999999999999886541   1236788777543221      10  


Q ss_pred             CCCCCccCCCCCCCCCCcchhHH-----HHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLE-----DILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e-----~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                          + ....+..+  ...|+..     .+...+..  ...|++++++||+.|+++......   .....  ....  ..
T Consensus       160 ----~-~~~~~~~~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~--~~~~--~~  225 (265)
T 1h5q_A          160 ----Q-SSLNGSLT--QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---KKIRD--HQAS--NI  225 (265)
T ss_dssp             ----E-EETTEECS--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HHHHH--HHHH--TC
T ss_pred             ----c-cccccccc--ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc---hhHHH--HHHh--cC
Confidence                0 00011111  2236543     23322221  345899999999999984221111   11100  0011  11


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                      |+   +      .+.+..|+   |.++++++..+  ...|++|++.+|.
T Consensus       226 ~~---~------~~~~~~dv---a~~~~~l~~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          226 PL---N------RFAQPEEM---TGQAILLLSDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             TT---S------SCBCGGGG---HHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             cc---c------CCCCHHHH---HHHHHhhccCchhcCcCcEEEecCCE
Confidence            21   1      12344444   66666666542  2458899998764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.63  E-value=2.7e-15  Score=134.47  Aligned_cols=210  Identities=17%  Similarity=0.109  Sum_probs=132.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      |+|++|||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|+++++++++   
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   77 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAE-----EGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVV   77 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            568999999999999999999999     899999998864211       0 012467899999999998877776   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+      ++.   
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~~---  148 (246)
T 3osu_A           78 SQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGA------VGN---  148 (246)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH------HCC---
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc------CCC---
Confidence                6788999988543211      144668899999999999988432  1124567777653222      110   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                                  + ....|+..|.     ...+.  ....|+++.+++|+.|.++.......   .+..  .+.  ...|
T Consensus       149 ------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~--~~~--~~~p  208 (246)
T 3osu_A          149 ------------P-GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD---ELKE--QML--TQIP  208 (246)
T ss_dssp             ------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCH---HHHH--HHH--TTCT
T ss_pred             ------------C-CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCH---HHHH--HHH--hcCC
Confidence                        0 1122664332     22211  03568999999999999853222111   1100  011  1222


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                      +.         .   ..+..++|.++++++..+.  ..|++|++.+|.
T Consensus       209 ~~---------r---~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          209 LA---------R---FGQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             TC---------S---CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             CC---------C---CcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            11         1   1233445777777775433  348999998764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.63  E-value=1.1e-15  Score=137.64  Aligned_cols=215  Identities=16%  Similarity=0.127  Sum_probs=114.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++    
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAR-----EGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 012467899999999998877766    


Q ss_pred             ---cCCCeeEEEEecc---C------CCccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047           93 ---QLTDVTHIFYVTW---T------NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 ---~~~~V~h~a~~~~---~------~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                         .+|.|+|+|+...   .      ..++....+++|+.|+.++++++...  ..+..+++++||...|...       
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  155 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS-------  155 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC-------
Confidence               6788999987521   0      11145677899999976666655432  1124567777654332100       


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCcee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  236 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  236 (396)
                                   ........+.+.+...+..  ...++++..++|+.|.++......  ...+.  ..+.+  +.|+  
T Consensus       156 -------------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~--~~~~~--~~~~--  214 (253)
T 3qiv_A          156 -------------NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--PKEMV--DDIVK--GLPL--  214 (253)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------
T ss_pred             -------------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--cHHHH--HHHhc--cCCC--
Confidence                         0111112233333333221  346899999999999984211110  00000  00000  1111  


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCee
Q 016047          237 PGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  281 (396)
Q Consensus       237 ~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~  281 (396)
                             ..+.+..|   +|.++++++..+  ...|++|++.+|..+
T Consensus       215 -------~~~~~~~d---va~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          215 -------SRMGTPDD---LVGMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             ------------CCH---HHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred             -------CCCCCHHH---HHHHHHHHcCccccCCCCCEEEECCCeec
Confidence                   11223334   477777766532  235899999887654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.63  E-value=6.1e-15  Score=133.05  Aligned_cols=213  Identities=12%  Similarity=0.076  Sum_probs=131.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC----CCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----ADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+......    ...++.++.+|++|+++++++++       
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQ-----EGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            358999999999999999999999     89999999998653211    12367899999999998887776       


Q ss_pred             cCCCeeEEEEeccCC----------CccHHHHHHhHHHHHHHHHHHHccc-C-------CCcceEEEeccceeecccccc
Q 016047           93 QLTDVTHIFYVTWTN----------RSTEAENCKINGSMFRNVLRAVIPN-A-------PNLRHVCLQTGTKHYLGPFEA  154 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~----------~~~~~~~~~~nv~gt~~ll~a~~~~-~-------~~~~~~~~~s~~~~y~ss~~~  154 (396)
                      .+|.++|+|+.....          .++....+++|+.|+.++++++.+. .       .+..+++++||...+..    
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~----  156 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG----  156 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC----
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC----
Confidence            678899998754221          1245667899999999999988764 1       12456777765332211    


Q ss_pred             cccCCCCCCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHH
Q 016047          155 FGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAV  226 (396)
Q Consensus       155 ~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i  226 (396)
                              .         + ....|+..|.     .   ...+ ...|+++..++|+.|.++.....   ....      
T Consensus       157 --------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~t~~~~~~---~~~~------  208 (257)
T 3tpc_A          157 --------Q---------I-GQAAYAASKGGVAALTLPAAREL-ARFGIRVVTIAPGIFDTPMMAGM---PQDV------  208 (257)
T ss_dssp             --------C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBSCC------------------
T ss_pred             --------C---------C-CCcchHHHHHHHHHHHHHHHHHH-HHcCeEEEEEEeCCCCChhhccC---CHHH------
Confidence                    0         0 1122664332     2   2222 34689999999999988321110   0000      


Q ss_pred             hhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeee
Q 016047          227 CKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFK  282 (396)
Q Consensus       227 ~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s  282 (396)
                      ........+.++         ......++|.++++++......|+++++.+|..++
T Consensus       209 ~~~~~~~~p~~~---------r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          209 QDALAASVPFPP---------RLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             -----CCSSSSC---------SCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             HHHHHhcCCCCC---------CCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            011111111111         12334556788888776655678999998776543

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.63  E-value=7.8e-16  Score=138.23  Aligned_cols=215  Identities=14%  Similarity=0.071  Sum_probs=130.0

Q ss_pred             cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +.+..+|+||||||+|+||++++++|++     +|++|++++|+....  .  ....++.++.+|+++.+++.++++   
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   83 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHK-----LGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTS   83 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCS
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcC
Confidence            3445678999999999999999999999     899999999975321  0  011468899999999999988887   


Q ss_pred             cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|+|+.....      .++....+++|+.|+.++++++...  ..+..+++++||...|..            . 
T Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------~-  150 (249)
T 3f9i_A           84 NLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG------------N-  150 (249)
T ss_dssp             CCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C------------C-
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC------------C-
Confidence            467788888754321      1256778999999999998887543  112457777765332211            0 


Q ss_pred             ccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceec
Q 016047          165 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  237 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  237 (396)
                              + ....|+..|.     ...+.  ....|+++.+++|+.|.++.......  .....   ...  ..++   
T Consensus       151 --------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~---~~~--~~~~---  211 (249)
T 3f9i_A          151 --------P-GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE--KQREA---IVQ--KIPL---  211 (249)
T ss_dssp             --------S-CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH--HHHHH---HHH--HCTT---
T ss_pred             --------C-CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH--HHHHH---HHh--cCCC---
Confidence                    1 1123664333     22211  13468999999999998842211111  00100   011  1111   


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCe
Q 016047          238 GTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDV  280 (396)
Q Consensus       238 g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~  280 (396)
                            ..+.   ...++|.++++++..+.  ..|++|++.+|..
T Consensus       212 ------~~~~---~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          212 ------GTYG---IPEDVAYAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             ------CSCB---CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             ------CCCc---CHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence                  1122   23445777777765432  3589999987643

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.62  E-value=4.4e-16  Score=140.85  Aligned_cols=215  Identities=14%  Similarity=0.043  Sum_probs=131.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++    
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQ-----DGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0 012367889999999998877665    


Q ss_pred             ---cCCCeeEEEEeccC--C---C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVTWT--N---R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~--~---~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.++|+|+....  .   .  ++....+++|+.|+.++++++...  ..+..+++++||...|       ..   
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~---  157 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAY-------HP---  157 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT-------SC---
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhc-------CC---
Confidence               68889999875321  1   1  134667899999999998887542  1135678877653322       11   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                        .         + ....|+..|     +.....  ....|+++.+++|+.+.++....... ......  .....  .|
T Consensus       158 --~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~--~~~~~--~~  220 (260)
T 2zat_A          158 --F---------P-NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM-DKARKE--YMKES--LR  220 (260)
T ss_dssp             --C---------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS-SHHHHH--HHHHH--HT
T ss_pred             --C---------C-CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc-ChHHHH--HHHhc--CC
Confidence              0         1 112255422     222221  13458999999999998832110000 000000  00110  01


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeee
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFK  282 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s  282 (396)
                               ...+.+..|+   |.++++++..+.  ..|++|++.+|...|
T Consensus       221 ---------~~~~~~~~dv---a~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          221 ---------IRRLGNPEDC---AGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             ---------CSSCBCGGGG---HHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             ---------CCCCCCHHHH---HHHHHHHcCcccCCccCCEEEECCCcccc
Confidence                     0123344454   666777665432  358899999887655

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.62  E-value=1.5e-15  Score=136.17  Aligned_cols=158  Identities=13%  Similarity=0.019  Sum_probs=108.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      ++|+||||||+|+||++++++|++     +|++|++++|++...      ..  ...++.++.+|++|+++++++++   
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLAS-----AGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIY   80 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            357999999999999999999999     899999999975321      00  02468899999999999888776   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          ++|.|+|+|+......      .+....+++|+.|+.++++++.+.  ..+..+++++||...+      ++.   
T Consensus        81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------~~~---  151 (248)
T 2pnf_A           81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGF------TGN---  151 (248)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHH------HCC---
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhc------CCC---
Confidence                6888999987543211      145667899999998877766543  1135678877653211      110   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                                  + ....|+..|     +...+.  ....+++++++||+.++++
T Consensus       152 ------------~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~  193 (248)
T 2pnf_A          152 ------------V-GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETD  193 (248)
T ss_dssp             ------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred             ------------C-CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCc
Confidence                        0 011255422     222221  0345899999999999984

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.62  E-value=3.6e-16  Score=142.39  Aligned_cols=159  Identities=14%  Similarity=-0.020  Sum_probs=107.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....       . ....++.++.+|++|++++.++++   
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~-----~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGR-----RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999943211       0 012467899999999998888776   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                          ++|.|+|+|+......      .+....+++|+.|+.++++++.+.-.+-.+++++||...|.      +.     
T Consensus        95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~------~~-----  163 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM------TG-----  163 (274)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC------CS-----
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhcc------CC-----
Confidence                6778889877532211      13466789999999999998876411115677766432220      11     


Q ss_pred             CCccCCCCCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                      .         + ....|+.     +.+...+..  ...+++++++||+.++++
T Consensus       164 ~---------~-~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~  206 (274)
T 1ja9_A          164 I---------P-NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD  206 (274)
T ss_dssp             C---------C-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             C---------C-CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence            0         1 1122654     333332221  235899999999999883

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.62  E-value=9.2e-16  Score=137.49  Aligned_cols=156  Identities=13%  Similarity=0.034  Sum_probs=101.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+|+||++++++|++     +|++|++++ |++...      . ....++.++.+|++|+++++++++    
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~-----~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGN-----MGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMD   79 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999     899999995 443211      0 012468899999999998887776    


Q ss_pred             ---cCCCeeEEEEeccC------CCccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.|+|+|+....      ...+....+++|+.|+.++++++.+.  ..+..+++++||...      .++.    
T Consensus        80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------~~~~----  149 (247)
T 2hq1_A           80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAG------IIGN----  149 (247)
T ss_dssp             HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh------ccCC----
Confidence               67889999875432      11245678899999999888877653  112567887764321      2221    


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                                 + ....|+..|.     ...+.  ....++++.+++|+.+.+
T Consensus       150 -----------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  190 (247)
T 2hq1_A          150 -----------A-GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKT  190 (247)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             -----------C-CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEec
Confidence                       0 1122654332     22221  134579999999999877

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.61  E-value=4.6e-16  Score=139.22  Aligned_cols=212  Identities=12%  Similarity=0.058  Sum_probs=131.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-CCCCCeeEEEecCCChHHHHHHHhc---CCCee
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQ---LTDVT   98 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~   98 (396)
                      +++||||||+|+||++++++|++     +|++|++++|++...  . ....+++++.+|++|+++++++++.   +|.|+
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHA-----TGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence            57999999999999999999999     899999999975321  0 0013567889999999999998864   67789


Q ss_pred             EEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CC-cceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           99 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PN-LRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        99 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~-~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                      |+|+......      +.....+++|+.++.++++++.+.-  .+ ..+++++||...+       ..     .      
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------~~-----~------  143 (244)
T 3d3w_A           82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ-------RA-----V------  143 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------SC-----C------
T ss_pred             ECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhc-------cC-----C------
Confidence            9887533211      1346688999999999998887641  11 4677777643211       10     0      


Q ss_pred             CCCCCCCcchhH-----HHHHHHHhh--cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          170 PRLDAPNFYYTL-----EDILFEEVE--KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       170 p~~~~~~~~y~~-----e~~l~~~~~--~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                         + ....|+.     +.+...+..  ...++++.++||+.|+++..............   +..  ..|.        
T Consensus       144 ---~-~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~---~~~--~~~~--------  206 (244)
T 3d3w_A          144 ---T-NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKT---MLN--RIPL--------  206 (244)
T ss_dssp             ---T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHH---HHH--TCTT--------
T ss_pred             ---C-CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHH---HHh--hCCC--------
Confidence               1 1223664     333333221  23579999999999998321100000000000   011  1111        


Q ss_pred             cceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCe
Q 016047          243 WECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  280 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~  280 (396)
                       ..+   .+..++|+++++++..+  ...|+.|++.++..
T Consensus       207 -~~~---~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          207 -GKF---AEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             -CSC---BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -CCC---cCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence             122   23455578888777543  23588999987643

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.61  E-value=1.3e-14  Score=130.66  Aligned_cols=155  Identities=13%  Similarity=0.044  Sum_probs=106.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----C-CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....    . ....++.++.+|++|++++.++++       
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLAR-----AGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999     899999999976411    0 012467889999999999888777       


Q ss_pred             cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      ++|.++|+|+.....      .++....+++|+.|+.++++++...  ..+..+++++||...+       ..     . 
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~-  145 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGL-------VG-----S-  145 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT-------SC-----C-
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhc-------cC-----C-
Confidence            788899998753221      1145667899999877776655322  1125678877653222       10     0 


Q ss_pred             ccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                              + ....|+..|.     .   ...+ ...|+++.+++|+.|.+
T Consensus       146 --------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t  186 (255)
T 2q2v_A          146 --------T-GKAAYVAAKHGVVGLTKVVGLET-ATSNVTCNAICPGWVLT  186 (255)
T ss_dssp             --------T-TBHHHHHHHHHHHHHHHHHHHHT-TTSSEEEEEEEESSBCC
T ss_pred             --------C-CchhHHHHHHHHHHHHHHHHHHh-cccCcEEEEEeeCCCcC
Confidence                    1 1122554222     2   2222 34689999999999998

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.61  E-value=1.1e-14  Score=133.50  Aligned_cols=168  Identities=14%  Similarity=0.055  Sum_probs=113.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCeeEEEecCCCh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSDP   84 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d~   84 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+.....                   ....++.++.+|++|+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAE-----EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            458999999999999999999999     8999999998732110                   0124678999999999


Q ss_pred             HHHHHHHh-------cCCCeeEEEEeccCC----CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccc
Q 016047           85 EETQAKLS-------QLTDVTHIFYVTWTN----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFE  153 (396)
Q Consensus        85 ~~~~~~~~-------~~~~V~h~a~~~~~~----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~  153 (396)
                      ++++++++       .+|.++|+|+.....    .++....+++|+.|+.++++++.....+-.+++++||...+...  
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--  161 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAA--  161 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHH--
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccc--
Confidence            98877665       678899998864322    22567789999999999999998764334567777764433221  


Q ss_pred             ccccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeec
Q 016047          154 AFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       154 ~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                          .   ..+..|..+. + ....|+..|.        +...+ ...|+++..++|+.|..+
T Consensus       162 ----~---~~~~~~~~~~-~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~  214 (287)
T 3pxx_A          162 ----A---QPPGAGGPQG-P-GGAGYSYAKQLVDSYTLQLAAQL-APQSIRANVIHPTNVNTD  214 (287)
T ss_dssp             ----H---CCC-----CH-H-HHHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEESSBSST
T ss_pred             ----c---ccccccccCC-C-ccchHHHHHHHHHHHHHHHHHHH-hhcCcEEEEEecCccccc
Confidence                0   1222222211 1 1123554322        22222 345899999999999883

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.61  E-value=1.5e-14  Score=131.63  Aligned_cols=210  Identities=12%  Similarity=0.037  Sum_probs=131.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|+++++++++       .
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (271)
T 3tzq_B           11 NKVAIITGACGGIGLETSRVLAR-----AGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGR   85 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999     8999999999864310    002467899999999998887776       6


Q ss_pred             CCCeeEEEEeccC-CC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCC
Q 016047           94 LTDVTHIFYVTWT-NR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        94 ~~~V~h~a~~~~~-~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                      +|.++|+|+.... ..       +.....+++|+.|+.++++++...  ..+..+++++||...+..            .
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~  153 (271)
T 3tzq_B           86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA------------Y  153 (271)
T ss_dssp             CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB------------C
T ss_pred             CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC------------C
Confidence            7889999875422 11       134668899999999999988432  112467777764332210            0


Q ss_pred             CccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCcee
Q 016047          164 PFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  236 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  236 (396)
                               + ....|+..|.     .....  ....|+++.+++|+.|.++......  ......  ....  ..++  
T Consensus       154 ---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~--~~~~--~~~~--  215 (271)
T 3tzq_B          154 ---------D-MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL--PQPIVD--IFAT--HHLA--  215 (271)
T ss_dssp             ---------S-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHH--HHHT--TSTT--
T ss_pred             ---------C-CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC--CHHHHH--HHHh--cCCC--
Confidence                     1 1122654322     22211  1346899999999999994322111  111100  0011  1111  


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          237 PGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       237 ~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                       +      .   ..+..++|..+++++..+  ...|+++++.+|.
T Consensus       216 -~------r---~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          216 -G------R---IGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             -S------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             -C------C---CcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence             1      1   223445578888877543  2358999998773

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.61  E-value=1e-15  Score=138.92  Aligned_cols=220  Identities=16%  Similarity=0.087  Sum_probs=133.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....      .   ....++.++.+|++|+++++++++.  
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLL-----KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV   81 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999975321      0   0123578999999999988877764  


Q ss_pred             -----CCCeeEEEEeccCCCccHHHHHHhHHHHHHH----HHHHHcccC-CCcceEEEeccceeecccccccccCCCCCC
Q 016047           94 -----LTDVTHIFYVTWTNRSTEAENCKINGSMFRN----VLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~----ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                           +|.|+|+|+..  ...+....+++|+.++.+    ++..+++.+ .+..+++++||...|       ..     .
T Consensus        82 ~~~g~id~lv~~Ag~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~  147 (267)
T 2gdz_A           82 DHFGRLDILVNNAGVN--NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL-------MP-----V  147 (267)
T ss_dssp             HHHSCCCEEEECCCCC--CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-------SC-----C
T ss_pred             HHcCCCCEEEECCCCC--ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcccc-------CC-----C
Confidence                 58888887642  234667888999886544    455554432 124678877653222       10     0


Q ss_pred             CccCCCCCCCCCCcchhHHH-----HHHH-----HhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          164 PFTEDMPRLDAPNFYYTLED-----ILFE-----EVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~-----~l~~-----~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                               + ....|+..|     +...     .. ...|+++.+++|+.|.++....... ......+.........+
T Consensus       148 ---------~-~~~~Y~~sK~a~~~~~~~~ala~e~-~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~  215 (267)
T 2gdz_A          148 ---------A-QQPVYCASKHGIVGFTRSAALAANL-MNSGVRLNAICPGFVNTAILESIEK-EENMGQYIEYKDHIKDM  215 (267)
T ss_dssp             ---------T-TCHHHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEEESCBSSHHHHGGGC-HHHHGGGGGGHHHHHHH
T ss_pred             ---------C-CCchHHHHHHHHHHHHHHHHHHHHh-ccCCcEEEEEecCcCcchhhhcccc-ccccchhhhHHHHHHHH
Confidence                     1 111255422     2221     12 4578999999999998731000000 00000000000000000


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHH
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKH  285 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~e  285 (396)
                      +          ......+..++|..+++++.++...|+++++.++...++.|
T Consensus       216 ~----------~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          216 I----------KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             H----------HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             h----------ccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            0          00112344556888888877666678999999988888764

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.61  E-value=5.6e-15  Score=133.81  Aligned_cols=211  Identities=14%  Similarity=0.056  Sum_probs=133.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC----CCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----ADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+......    ...++.++.+|++|+++++++++       .
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVG-----QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            58999999999999999999999     89999999998643100    02468899999999998888776       7


Q ss_pred             CCCeeEEEEeccCC------------CccHHHHHHhHHHHHHHHHHHHccc-C-C------CcceEEEeccceeeccccc
Q 016047           94 LTDVTHIFYVTWTN------------RSTEAENCKINGSMFRNVLRAVIPN-A-P------NLRHVCLQTGTKHYLGPFE  153 (396)
Q Consensus        94 ~~~V~h~a~~~~~~------------~~~~~~~~~~nv~gt~~ll~a~~~~-~-~------~~~~~~~~s~~~~y~ss~~  153 (396)
                      +|.|+|+|+.....            .++....+++|+.++.++++++.+. . .      +..+++++||...+..   
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---  163 (265)
T 2o23_A           87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG---  163 (265)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC---
T ss_pred             CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC---
Confidence            88899998754221            1135667899999999999988764 1 1      3567887765432211   


Q ss_pred             ccccCCCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHH
Q 016047          154 AFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAV  226 (396)
Q Consensus       154 ~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i  226 (396)
                               .         + ....|+..|.     .....  ....++++.+++|+.|.++....   ......  ...
T Consensus       164 ---------~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~--~~~  219 (265)
T 2o23_A          164 ---------Q---------V-GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LPEKVC--NFL  219 (265)
T ss_dssp             ---------C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------------CHH
T ss_pred             ---------C---------C-CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc---cCHHHH--HHH
Confidence                     0         0 1123654332     22211  13458999999999998832111   000000  000


Q ss_pred             hhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCe
Q 016047          227 CKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDV  280 (396)
Q Consensus       227 ~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~  280 (396)
                      ..  ..|  .++      .   ..+..++|+.+++++.++...|+++++.++..
T Consensus       220 ~~--~~~--~~~------~---~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~  260 (265)
T 2o23_A          220 AS--QVP--FPS------R---LGDPAEYAHLVQAIIENPFLNGEVIRLDGAIR  260 (265)
T ss_dssp             HH--TCS--SSC------S---CBCHHHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             HH--cCC--CcC------C---CCCHHHHHHHHHHHhhcCccCceEEEECCCEe
Confidence            01  111  111      1   22445557777777766556788999887654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.60  E-value=4.4e-15  Score=135.83  Aligned_cols=158  Identities=14%  Similarity=-0.009  Sum_probs=108.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCeeEEEecCCCh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSDP   84 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d~   84 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+.....                   ....++.++.+|++|+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAE-----AGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            458999999999999999999999     8999999999742210                   0124678999999999


Q ss_pred             HHHHHHHh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeec
Q 016047           85 EETQAKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYL  149 (396)
Q Consensus        85 ~~~~~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~  149 (396)
                      ++++++++       .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            98877765       6788999988543211      145677899999999999987542  11245677776532221


Q ss_pred             ccccccccCCCCCCCccCCCCCCCCCCcchhHHHH-----HHHHhh--cCCCeeEEEEcCCceeec
Q 016047          150 GPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       150 ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                      .            .         + ....|+..|.     .+.+..  ...|+++..++|+.|+++
T Consensus       164 ~------------~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  207 (281)
T 3s55_A          164 A------------N---------F-AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETP  207 (281)
T ss_dssp             C------------C---------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCST
T ss_pred             C------------C---------C-CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCc
Confidence            0            0         0 1122664332     222211  346899999999999994

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.60  E-value=1.6e-14  Score=129.80  Aligned_cols=155  Identities=10%  Similarity=-0.013  Sum_probs=105.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~   96 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+.....   .++.++.+|++|++++.++++       .+|.
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVE-----AGAKVTGFDQAFTQEQ---YPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCCCSSC---CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCchhhhc---CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            357999999999999999999999     8999999999865321   247889999999998888776       5788


Q ss_pred             eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      ++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+       .       +    
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-------~-------~----  139 (250)
T 2fwm_X           78 LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAH-------T-------P----  139 (250)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-------S-------C----
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhC-------C-------C----
Confidence            999987533211      145678899999999999988432  1124677777643211       1       0    


Q ss_pred             CCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          169 MPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       169 ~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                         .+ ....|+..|     +.....  ....|+++.++||+.+.++
T Consensus       140 ---~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  182 (250)
T 2fwm_X          140 ---RI-GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTD  182 (250)
T ss_dssp             ---CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred             ---CC-CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCc
Confidence               01 112265432     222221  1345899999999999984

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.60  E-value=3.5e-14  Score=128.57  Aligned_cols=113  Identities=13%  Similarity=0.161  Sum_probs=88.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~   96 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|++..    ..++.++.+|++|+++++++++       .+|.
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVD-----EGSKVIDLSIHDPG----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESSCCC----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEecCccc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            358999999999999999999999     89999999998654    2468899999999998887776       5788


Q ss_pred             eeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccc
Q 016047           97 VTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGT  145 (396)
Q Consensus        97 V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~  145 (396)
                      |+|+|+.....      .++....+++|+.|+.++++++.+.  ..+..+++++||.
T Consensus        78 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  134 (264)
T 2dtx_A           78 LVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSV  134 (264)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCG
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCc
Confidence            99998753321      1145678899999999988887654  1235678877653

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.60  E-value=9.5e-15  Score=134.29  Aligned_cols=156  Identities=11%  Similarity=0.091  Sum_probs=110.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....        .....++.++.+|++|+++++++++   
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  120 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAK-----EGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV  120 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321        0112478899999999998877665   


Q ss_pred             ----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          .+|.++|+|+......       ++....+++|+.|+.++++++...-.+-.+++++||...|...          
T Consensus       121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------  190 (291)
T 3ijr_A          121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN----------  190 (291)
T ss_dssp             HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC----------
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC----------
Confidence                5788999887543221       1456788999999999999998763334577777654333110          


Q ss_pred             CCCccCCCCCCCCCCcchhHHH-----HH---HHHhhcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTLED-----IL---FEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~-----~l---~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                 + ....|+..|     +.   ...+ ...|+++..++|+.|.+
T Consensus       191 -----------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~T  231 (291)
T 3ijr_A          191 -----------E-TLIDYSATKGAIVAFTRSLSQSL-VQKGIRVNGVAPGPIWT  231 (291)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS
T ss_pred             -----------C-CChhHHHHHHHHHHHHHHHHHHH-hhcCEEEEEEeeCCCcC
Confidence                       0 112265422     22   2222 34589999999999998

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.59  E-value=1.5e-14  Score=129.52  Aligned_cols=163  Identities=13%  Similarity=0.068  Sum_probs=108.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      +|+||||||+|+||.+++++|++     +|  ++|++++|++....    ....++.++.+|++|++++.++++      
T Consensus         3 ~k~vlItGasggiG~~la~~l~~-----~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVK-----DKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHT-----CTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHh-----cCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999     78  99999999754320    013478899999999998887776      


Q ss_pred             ---cCCCeeEEEEecc-CC----C--ccHHHHHHhHHHHHHHHHHHHcccC--C------C-----cceEEEeccceeec
Q 016047           93 ---QLTDVTHIFYVTW-TN----R--STEAENCKINGSMFRNVLRAVIPNA--P------N-----LRHVCLQTGTKHYL  149 (396)
Q Consensus        93 ---~~~~V~h~a~~~~-~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~--~------~-----~~~~~~~s~~~~y~  149 (396)
                         .+|.|+|+|+... ..    .  .+....+++|+.++.++++++...-  .      +     ..+++++||...+.
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  157 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence               7888999987543 11    1  1356678999999999998876541  0      1     46777776543221


Q ss_pred             ccccccccCCCCCCCccCCCCCCCCCCcchhHH-----HHHHHHhh--cCCCeeEEEEcCCceee
Q 016047          150 GPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLE-----DILFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       150 ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e-----~~l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                            +.      + .++.+  +.+...|+..     .+...+..  ...++++.++||+.|.+
T Consensus       158 ------~~------~-~~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  207 (250)
T 1yo6_A          158 ------TD------N-TSGSA--QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT  207 (250)
T ss_dssp             ------TT------C-CSTTS--SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--
T ss_pred             ------CC------c-ccccc--cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceec
Confidence                  10      0 01111  1122236643     33322221  23479999999998877

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.59  E-value=2.2e-14  Score=129.88  Aligned_cols=156  Identities=10%  Similarity=-0.053  Sum_probs=107.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|++...    .....++.++.+|++|+++++++++       .
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDK-----AGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999     899999999975321    0001267889999999998888776       6


Q ss_pred             CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           94 LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      +|.|+|+|+......      ++....+++|+.|+.++++++.+.   .....+++++||...+       .     .. 
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~-----~~-  153 (263)
T 3ak4_A           87 FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAK-------V-----GA-  153 (263)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT-------S-----CC-
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc-------c-----CC-
Confidence            888999987533211      145667899999999999988754   1113567766642211       1     00 


Q ss_pred             ccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                              + ....|+..|.     ...+.  ....|+++.++||+.|++
T Consensus       154 --------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  194 (263)
T 3ak4_A          154 --------P-LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKT  194 (263)
T ss_dssp             --------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTT
T ss_pred             --------C-CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccC
Confidence                    1 1122654332     22221  134589999999999988

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.59  E-value=1.8e-15  Score=135.37  Aligned_cols=156  Identities=17%  Similarity=0.073  Sum_probs=107.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+|+||++++++|++     +|++|+++ .|++...      .. ...++.++.+|++|+++++++++    
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~-----~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGK-----AGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAID   75 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999     89999985 6654211      00 02367889999999998888776    


Q ss_pred             ---cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.|+|+|+.....      .++....+++|+.|+.++++++.+.  ..+..+++++||...+      ++.    
T Consensus        76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------~~~----  145 (244)
T 1edo_A           76 AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL------IGN----  145 (244)
T ss_dssp             HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH------HCC----
T ss_pred             HcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhc------CCC----
Confidence               578899998754321      1145667899999999999988764  1125678877753222      110    


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                                 + ....|+..|.     .   .... ...+++++++||+.++++
T Consensus       146 -----------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~  187 (244)
T 1edo_A          146 -----------I-GQANYAAAKAGVIGFSKTAAREG-ASRNINVNVVCPGFIASD  187 (244)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHH-HTTTEEEEEEEECSBCSH
T ss_pred             -----------C-CCccchhhHHHHHHHHHHHHHHh-hhcCCEEEEEeeCccccc
Confidence                       0 1122554322     2   2222 346899999999999983

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.59  E-value=5.9e-15  Score=133.08  Aligned_cols=219  Identities=11%  Similarity=0.018  Sum_probs=131.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--CCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLS-------QL   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|++.....  .... .++.+|++|+++++++++       .+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAR-----EGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            357999999999999999999999     89999999997643100  0013 789999999988877665       57


Q ss_pred             CCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           95 TDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        95 ~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      |.++|+|+.....    .  ++....+++|+.|+.++++++...  ..+..+++++||...+      ++      .   
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~------~~------~---  143 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL------FA------E---  143 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT------SB------C---
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcccccc------CC------C---
Confidence            8899998753321    1  134678899999999999987653  2235678877643211      11      0   


Q ss_pred             CCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCC
Q 016047          167 EDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT  239 (396)
Q Consensus       167 E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~  239 (396)
                            + ....|+..|     +...+.  ....++++.+++|+.+.++.       ...+.. .....  .........
T Consensus       144 ------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-------~~~~~~-~~~~~--~~~~~~~~~  206 (256)
T 2d1y_A          144 ------Q-ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-------VLEAIA-LSPDP--ERTRRDWED  206 (256)
T ss_dssp             ------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HHHHHC-----------CHHHHT
T ss_pred             ------C-CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-------hhhccc-cccCC--HHHHHHHHh
Confidence                  1 112265432     222221  03458999999999988721       000000 00000  000000000


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeH
Q 016047          240 KAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  283 (396)
Q Consensus       240 ~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~  283 (396)
                      ....   ....+..++|.++++++..+  ...|++|++.++...++
T Consensus       207 ~~~~---~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          207 LHAL---RRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             TSTT---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             cCCC---CCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence            0011   12334455688888777543  24588999988765544

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.59  E-value=6.2e-15  Score=133.51  Aligned_cols=214  Identities=13%  Similarity=0.065  Sum_probs=130.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +.|+||||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|+++++++++   
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   80 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLA-----KGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM   80 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHH-----CCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899999998875321       0 012468899999999998887776   


Q ss_pred             ----cCCCeeEEEEeccCC------C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047           93 ----QLTDVTHIFYVTWTN------R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~------~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                          .+|.|+|+|+.....      .  ++....+++|+.|+.++++++...  ..+..+++++|+..       .++. 
T Consensus        81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~-------~~~~-  152 (264)
T 3i4f_A           81 SHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQG-------ADSA-  152 (264)
T ss_dssp             HHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTT-------GGGC-
T ss_pred             HHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeech-------hccc-
Confidence                678899998731111      1  134667899999999999988432  11245677665321       1110 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcC
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  231 (396)
                          .+       .+ ....|+..|.     .....  ....|+++.+++|+.|+++......   ...      .....
T Consensus       153 ----~~-------~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~------~~~~~  211 (264)
T 3i4f_A          153 ----PG-------WI-YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI---QEA------RQLKE  211 (264)
T ss_dssp             ----CC-------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH---HHH------HHC--
T ss_pred             ----CC-------CC-CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc---HHH------HHHHh
Confidence                00       01 1123654322     22111  1346899999999999994322111   111      01000


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCee
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  281 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~  281 (396)
                      ...+          .....+..++|+++++++..+.  ..|+++++.+|-..
T Consensus       212 ~~~p----------~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          212 HNTP----------IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             hcCC----------CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence            0001          1112344556888888775432  35899999887553

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.59  E-value=1.1e-14  Score=131.43  Aligned_cols=215  Identities=13%  Similarity=0.089  Sum_probs=134.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      ..+|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++   
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAK-----AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHH-----HTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321      0 012478899999999998877665   


Q ss_pred             ----cCCCeeEEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          .+|.++|+|+......     ++....+++|+.|+.++++++...  ..+..+++++||...+.      +     
T Consensus        85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~-----  153 (256)
T 3gaf_A           85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN------T-----  153 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC------C-----
T ss_pred             HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC------C-----
Confidence                6788999988543211     145667899999999999987543  11245777776432211      0     


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                       .         + ....|+..|.        +...+ ...|+++..++|+.|..+......  .....  ..+.  ...|
T Consensus       154 -~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~--~~~~--~~~p  215 (256)
T 3gaf_A          154 -N---------V-RMASYGSSKAAVNHLTRNIAFDV-GPMGIRVNAIAPGAIKTDALATVL--TPEIE--RAML--KHTP  215 (256)
T ss_dssp             -C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCCHHHHHHC--CHHHH--HHHH--TTCT
T ss_pred             -C---------C-CchHHHHHHHHHHHHHHHHHHHH-hhhCcEEEEEEEccccCchhhhcc--CHHHH--HHHH--hcCC
Confidence             0         1 1122664322        22222 345899999999999883110000  00000  0001  1112


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeH
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  283 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~  283 (396)
                      +            ....+..++|.++++++...  ...|+++++.+|...++
T Consensus       216 ~------------~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          216 L------------GRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             T------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred             C------------CCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence            1            11233455588888877542  33589999998876654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.59  E-value=1.6e-14  Score=132.10  Aligned_cols=159  Identities=13%  Similarity=0.069  Sum_probs=108.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ..++|++|||||+|+||.+++++|++     +|++|++++|+....         .....++.++.+|++|+++++++++
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   96 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAK-----AGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMA   96 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHH
Confidence            34568999999999999999999999     899999999853211         0113578899999999998887776


Q ss_pred             -------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047           93 -------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                             .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      + 
T Consensus        97 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~-  169 (281)
T 3v2h_A           97 MVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV------A-  169 (281)
T ss_dssp             HHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C-
T ss_pred             HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc------C-
Confidence                   5788999988543221      135667899999999999987433  11245677776432111      1 


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeec
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                           .         + ....|+..|.        +...+ ...|+++..++|+.|.++
T Consensus       170 -----~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t~  212 (281)
T 3v2h_A          170 -----S---------P-FKSAYVAAKHGIMGLTKTVALEV-AESGVTVNSICPGYVLTP  212 (281)
T ss_dssp             -----C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC-
T ss_pred             -----C---------C-CchHHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEECCCCcCc
Confidence                 0         1 1123664322        22222 345899999999999984

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.59  E-value=5.2e-14  Score=127.81  Aligned_cols=157  Identities=14%  Similarity=0.089  Sum_probs=107.8

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      .+..+|+||||||+|+||.+++++|++     +|++|++++|+.....   ..+..+++|++|++++.++++       .
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVR-----YGAKVVSVSLDEKSDV---NVSDHFKIDVTNEEEVKEAVEKTTKKYGR   81 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCC--CT---TSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCchhcc---CceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            344568999999999999999999999     8999999999865432   367889999999998877765       5


Q ss_pred             CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.++|+|+......      +.....+++|+.|+.++++++...  ..+..+++++||...|       ...       
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-------~~~-------  147 (269)
T 3vtz_A           82 IDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSY-------AAT-------  147 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------SBC-------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhc-------cCC-------
Confidence            788999987543221      134567899999999999887653  1124567777653322       110       


Q ss_pred             cCCCCCCCCCCcchhHHHH-----HHHHhh-cCCCeeEEEEcCCceee
Q 016047          166 TEDMPRLDAPNFYYTLEDI-----LFEEVE-KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~e~~-----l~~~~~-~~~~~~~~ilRp~~v~G  207 (396)
                             + ....|+..|.     ...+.. ...++++..++|+.|.+
T Consensus       148 -------~-~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T  187 (269)
T 3vtz_A          148 -------K-NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMT  187 (269)
T ss_dssp             -------T-TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCC
T ss_pred             -------C-CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcC
Confidence                   1 1122654322     222110 01279999999999988

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.59  E-value=3.2e-14  Score=129.90  Aligned_cols=223  Identities=13%  Similarity=0.060  Sum_probs=135.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCeeEEEecCCCh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSDP   84 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d~   84 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+.....                   ....++.++.+|++|+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   86 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAA-----DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR   86 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            458999999999999999999999     8999999998732100                   0124688999999999


Q ss_pred             HHHHHHHh-------cCCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccc
Q 016047           85 EETQAKLS-------QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPF  152 (396)
Q Consensus        85 ~~~~~~~~-------~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~  152 (396)
                      ++++++++       .+|.++|+|+......  ++....+++|+.|+.++++++....   .+-.+++++||...+    
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----  162 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL----  162 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT----
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc----
Confidence            98887776       6788999988543322  2456788999999999999876541   123467776643222    


Q ss_pred             cccccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHH
Q 016047          153 EAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYA  224 (396)
Q Consensus       153 ~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~  224 (396)
                        ++.    ..+       .+ ....|+..|.        +...+ ...|+++..++|+.|.++  ............  
T Consensus       163 --~~~----~~~-------~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~--~~~~~~~~~~~~--  223 (278)
T 3sx2_A          163 --AGV----GSA-------DP-GSVGYVAAKHGVVGLMRVYANLL-AGQMIRVNSIHPSGVETP--MINNEFTREWLA--  223 (278)
T ss_dssp             --SCC----CCS-------SH-HHHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCBSST--TTSSHHHHHHHH--
T ss_pred             --CCC----ccC-------CC-CchHhHHHHHHHHHHHHHHHHHH-hccCcEEEEEecCCccCc--cchhhhHHHHHh--
Confidence              110    000       01 1123654332        22222 356799999999999983  221111111100  


Q ss_pred             HHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          225 AVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       225 ~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                      .... ........+....    ....+..++|.++++++..+  ...|+++++.+|.
T Consensus       224 ~~~~-~~~~~~~~~~~~p----~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          224 KMAA-ATDTPGAMGNAMP----VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             HHHH-HCC--CTTSCSSS----CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hccc-hhhhhhhhhhhcC----cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            0011 1111111111111    22334556688888887543  3458999997764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.59  E-value=7.3e-14  Score=124.96  Aligned_cols=153  Identities=11%  Similarity=0.105  Sum_probs=106.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-----cCCCeeE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-----QLTDVTH   99 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~~~V~h   99 (396)
                      +|++|||||+|+||.+++++|++.    .|+.|++++|+....   ...+.++.+|++|+++++++++     .+|.++|
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~----~g~~v~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~   76 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQN----KNHTVINIDIQQSFS---AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFL   76 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTS----TTEEEEEEESSCCCC---CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhc----CCcEEEEeccccccc---cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence            478999999999999999999973    588999999876522   2578899999999999988876     4677888


Q ss_pred             EEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047          100 IFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus       100 ~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      +|+.....    .  ++....+++|+.|+.++++++.....+-.+++++||...+       ..     .         +
T Consensus        77 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~-----~---------~  135 (244)
T 4e4y_A           77 NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCF-------IA-----K---------P  135 (244)
T ss_dssp             CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGT-------CC-----C---------T
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHc-------cC-----C---------C
Confidence            87753211    1  1456678999999999999887652111356666543211       10     0         1


Q ss_pred             CCCcchhHHHHH--------HHHhhcCCCeeEEEEcCCceee
Q 016047          174 APNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       174 ~~~~~y~~e~~l--------~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                       ....|+..|..        .... ...|+++.+++|+.|..
T Consensus       136 -~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T  175 (244)
T 4e4y_A          136 -NSFAYTLSKGAIAQMTKSLALDL-AKYQIRVNTVCPGTVDT  175 (244)
T ss_dssp             -TBHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEESCBCC
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHH-HHcCeEEEEEecCccCc
Confidence             11236643222        2222 35689999999999987

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.59  E-value=9.9e-15  Score=131.89  Aligned_cols=210  Identities=14%  Similarity=0.009  Sum_probs=129.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--CCCCCeeEEEecCCChHHHHHHHh-------cCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--NADHLVEYVQCDVSDPEETQAKLS-------QLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~   95 (396)
                      +|+||||||+|+||.+++++|++     .|++|++++|+.....  ....++.++.+|++|+++++++++       .+|
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD  101 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLE-----HGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLR  101 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999     8999999999864310  011247899999999998877765       468


Q ss_pred             CeeEEEEeccCCCc-----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           96 DVTHIFYVTWTNRS-----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        96 ~V~h~a~~~~~~~~-----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      .++|+|+.......     +....+++|+.|+.++++++...  ..+..+++++||...+.      +      .     
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------~------~-----  164 (260)
T 3gem_A          102 AVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK------G------S-----  164 (260)
T ss_dssp             EEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT------C------C-----
T ss_pred             EEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC------C------C-----
Confidence            89998875432211     33567899999999999988654  22345777776432221      1      0     


Q ss_pred             CCCCCCCCcchhHHHH-----HHHHhh-cCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccc
Q 016047          169 MPRLDAPNFYYTLEDI-----LFEEVE-KKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAA  242 (396)
Q Consensus       169 ~p~~~~~~~~y~~e~~-----l~~~~~-~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~  242 (396)
                          + ....|+..|.     ...... -..++++..++|+.|..+  ....   ....  ....  ...|+.       
T Consensus       165 ----~-~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~--~~~~---~~~~--~~~~--~~~p~~-------  223 (260)
T 3gem_A          165 ----S-KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQ--PKDD---AAYR--ANAL--AKSALG-------  223 (260)
T ss_dssp             ----S-SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------------CCSC-------
T ss_pred             ----C-CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccC--CCCC---HHHH--HHHH--hcCCCC-------
Confidence                1 1123664322     222110 112599999999999873  1110   0000  0000  011111       


Q ss_pred             cceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeee
Q 016047          243 WECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFK  282 (396)
Q Consensus       243 ~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s  282 (396)
                        .   ..+..++|.++++++......|+++++.+|..++
T Consensus       224 --r---~~~~edva~~v~~L~~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          224 --I---EPGAEVIYQSLRYLLDSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             --C---CCCTHHHHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred             --C---CCCHHHHHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence              1   1223455777777775555678999998876543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.59  E-value=2.2e-14  Score=133.69  Aligned_cols=158  Identities=18%  Similarity=0.109  Sum_probs=106.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------------CCCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------------NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++.+|+.....            ....++.++.+|++|++++.++++
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~-----~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~   79 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAG-----AGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAID   79 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence            47899999999999999999999     8999999999742210            012468899999999998888776


Q ss_pred             -------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047           93 -------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                             .+|.|+|+|+......      ++....+++|+.|+.++++++...  ..+..+++.+||...+      .+.
T Consensus        80 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~------~~~  153 (324)
T 3u9l_A           80 QIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSA------GGT  153 (324)
T ss_dssp             HHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT------SCC
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhc------cCC
Confidence                   6888999988533211      144667899999999999988432  1124667776643211      110


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                           .         + ....|+..|     +...+.  ....|+++++++|+.|.++
T Consensus       154 -----~---------~-~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~  196 (324)
T 3u9l_A          154 -----P---------P-YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG  196 (324)
T ss_dssp             -----C---------S-SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred             -----C---------C-cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence                 0         1 112265432     222221  1346899999999999863

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.58  E-value=1.3e-14  Score=130.68  Aligned_cols=155  Identities=12%  Similarity=0.037  Sum_probs=107.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCCC-------CCCCCCeeEEEecCCCh-HHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN-------WNADHLVEYVQCDVSDP-EETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~-~~~~~~~~---   92 (396)
                      +|+||||||+|+||.+++++|++     +|++ |++++|+....       .....++.++.+|++|+ ++++++++   
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~-----~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVK-----RNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHH-----CCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            57999999999999999999999     8996 99999975311       00123678999999998 77766665   


Q ss_pred             ----cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCC-C----cceEEEeccceeecccccccccCCCCCC
Q 016047           93 ----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP-N----LRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~----~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                          .+|.|+|+|+..  ..++....+++|+.|+.++++++..... +    -.+++++||...|       ..     .
T Consensus        80 ~~~g~id~lv~~Ag~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~  145 (254)
T 1sby_A           80 DQLKTVDILINGAGIL--DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF-------NA-----I  145 (254)
T ss_dssp             HHHSCCCEEEECCCCC--CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-------SC-----C
T ss_pred             HhcCCCCEEEECCccC--CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhc-------cC-----C
Confidence                678899987742  3346788899999999999998875411 1    3467777643222       10     0


Q ss_pred             CccCCCCCCCCCCcchhHHHH-----HHHHhh--cCCCeeEEEEcCCceeec
Q 016047          164 PFTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                               + ....|+..|.     ...+..  ...|+++.+++|+.|.++
T Consensus       146 ---------~-~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~  187 (254)
T 1sby_A          146 ---------H-QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             ---------T-TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             ---------C-CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCc
Confidence                     1 1123664332     222211  225899999999999883

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.58  E-value=6.2e-15  Score=132.17  Aligned_cols=212  Identities=15%  Similarity=0.107  Sum_probs=132.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++.   
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-----~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALAS-----KGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 0124688999999999988877654   


Q ss_pred             ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          +|.|+|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +     
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~-----  147 (247)
T 3lyl_A           79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA------G-----  147 (247)
T ss_dssp             TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------C-----
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc------C-----
Confidence                577999887543211      145667899999999999887653  11235777776433221      1     


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  234 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  234 (396)
                       .         + ....|+..|.     .+...  ....|+++.+++|+.|..+............     ..  ...|.
T Consensus       148 -~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-----~~--~~~~~  209 (247)
T 3lyl_A          148 -N---------P-GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSF-----IA--TKIPS  209 (247)
T ss_dssp             -C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHH-----HH--TTSTT
T ss_pred             -C---------C-CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHH-----Hh--hcCCC
Confidence             0         1 1123664332     22211  1356899999999999884322211110000     01  11111


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCee
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  281 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~  281 (396)
                               ..   ..+..++|.++++++..+  ...|++|++.+|..+
T Consensus       210 ---------~~---~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          210 ---------GQ---IGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             ---------CC---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             ---------CC---CcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence                     11   223445577777777543  235899999876543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.58  E-value=6.2e-15  Score=133.98  Aligned_cols=223  Identities=11%  Similarity=0.036  Sum_probs=135.7

Q ss_pred             cCCCCCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHH
Q 016047           20 PARSYQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        20 ~~~~~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      +.+..+|+||||||+  |+||.+++++|++     +|++|++++|+....     . ....++.++.+|++|++++++++
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHH
Confidence            345567899999999  9999999999999     899999999874211     0 01135789999999999888777


Q ss_pred             h-------cCCCeeEEEEeccC--------C-C--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccc
Q 016047           92 S-------QLTDVTHIFYVTWT--------N-R--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFE  153 (396)
Q Consensus        92 ~-------~~~~V~h~a~~~~~--------~-~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~  153 (396)
                      +       .+|.++|+|+....        . .  .+....+++|+.++.++++++...-.+-.+++++||...+     
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-----  158 (271)
T 3ek2_A           84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE-----  158 (271)
T ss_dssp             HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGT-----
T ss_pred             HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccc-----
Confidence            6       35778888875432        0 1  1456678999999999999987652223356666532211     


Q ss_pred             ccccCCCCCCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHH
Q 016047          154 AFGKIKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA  225 (396)
Q Consensus       154 ~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  225 (396)
                        ..              .+ ....|+..|        .+...+ ...|+++.+++|+.|..+........ ..+..  .
T Consensus       159 --~~--------------~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~--~  217 (271)
T 3ek2_A          159 --RA--------------IP-NYNTMGLAKAALEASVRYLAVSL-GAKGVRVNAISAGPIKTLAASGIKSF-GKILD--F  217 (271)
T ss_dssp             --SB--------------CT-TTTHHHHHHHHHHHHHHHHHHHH-HTTTCEEEEEEECCC-----CCCHHH-HHHHH--H
T ss_pred             --cC--------------CC-CccchhHHHHHHHHHHHHHHHHH-HhcCcEEEEEecCcccchhhhcccch-HHHHH--H
Confidence              10              01 112265422        222222 45689999999999988322111111 11100  0


Q ss_pred             HhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCeeeHHHHH
Q 016047          226 VCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVFKWKHLW  287 (396)
Q Consensus       226 i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~s~~el~  287 (396)
                      ...  ..|+.         .   ..+..++|..+++++..  ....|+++++.+|..+++.++.
T Consensus       218 ~~~--~~~~~---------~---~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          218 VES--NSPLK---------R---NVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             HHH--HSTTS---------S---CCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             HHh--cCCcC---------C---CCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            111  11111         1   12344557888887754  3346899999988877776543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.58  E-value=9.5e-15  Score=132.20  Aligned_cols=213  Identities=16%  Similarity=0.103  Sum_probs=132.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....        .....++.++.+|++|+++++++++   
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFAR-----AGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321        0111478899999999998877765   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.++|+|+......      ++....+++|+.|+.++++++.+.  ..+..+++++||...+     ..+    
T Consensus        84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-----~~~----  154 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGP-----ITG----  154 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTT-----TBC----
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc-----cCC----
Confidence                6788999987533211      134667899999999999988765  1124567766642110     001    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                                 .+ ....|+..|     +.....  ....|+++..++|+.|.++......   ....  ....+  ..|
T Consensus       155 -----------~~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~--~~~~~--~~p  215 (262)
T 3pk0_A          155 -----------YP-GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG---EEYI--ASMAR--SIP  215 (262)
T ss_dssp             -----------CT-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC---HHHH--HHHHT--TST
T ss_pred             -----------CC-CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC---HHHH--HHHHh--cCC
Confidence                       01 112365422     222221  1346899999999999984211110   1110  00111  112


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCee
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  281 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~  281 (396)
                      +   +      .   ..+..++|..+++++..+  ...|+++++.+|..+
T Consensus       216 ~---~------r---~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          216 A---G------A---LGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             T---S------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             C---C------C---CcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            1   1      1   223445577777777543  245899999876543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.58  E-value=4.2e-15  Score=134.33  Aligned_cols=158  Identities=14%  Similarity=-0.033  Sum_probs=107.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC-CCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR-RPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R-~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++| +....      . ....++.++.+|++|++++.++++   
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFAT-----EKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            357999999999999999999999     8999999999 43211      0 012467889999999998877776   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CC-cceEEEeccceeecccccccccCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PN-LRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~-~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                          .+|.|+|+|+......      ++....+++|+.++.++++++.+..  .+ ..+++++||...+       .   
T Consensus        81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~-------~---  150 (261)
T 1gee_A           81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK-------I---  150 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT-------S---
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc-------C---
Confidence                6788999987543211      1456678999999999988776541  11 4577777642211       0   


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                          +      . + ....|+..|     +...+.  ....+++++++||+.|+++
T Consensus       151 ----~------~-~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  194 (261)
T 1gee_A          151 ----P------W-P-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP  194 (261)
T ss_dssp             ----C------C-T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSG
T ss_pred             ----C------C-C-CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCc
Confidence                0      0 1 122366433     222221  0345899999999999993

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.58  E-value=6.9e-15  Score=133.89  Aligned_cols=158  Identities=13%  Similarity=0.086  Sum_probs=105.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|+++.++....       . ....++.++.+|++|+++++++++   
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   99 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAAR-----QGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVD   99 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999     899998875433211       0 012468899999999998877665   


Q ss_pred             ----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC-----CCcceEEEeccceeecccccccc
Q 016047           93 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA-----PNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~-----~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                          .+|.|+|+|+......       ++....+++|+.|+.++++++.+.-     .+..+++++||...+.      +
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~  173 (272)
T 4e3z_A          100 RQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL------G  173 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHH------C
T ss_pred             HhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhcc------C
Confidence                5688999987543211       1456788999999999988876541     1245677776533221      1


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhHHHHH--------HHHhhcCCCeeEEEEcCCceeec
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~e~~l--------~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      .               +.....|+..|..        ...+ ...|+++.+++|+.|.++
T Consensus       174 ~---------------~~~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~  217 (272)
T 4e3z_A          174 S---------------ATQYVDYAASKAAIDTFTIGLAREV-AAEGIRVNAVRPGIIETD  217 (272)
T ss_dssp             C---------------TTTCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBC--
T ss_pred             C---------------CCCcchhHHHHHHHHHHHHHHHHHH-HHcCcEEEEEecCCCcCC
Confidence            0               0011126543322        2222 345899999999999983

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.58  E-value=9.9e-15  Score=132.01  Aligned_cols=218  Identities=13%  Similarity=0.026  Sum_probs=131.9

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+  |+||.+++++|++     +|++|++++|+....     .. ....+.++.+|++|+++++++++   
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKE-----AGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHH-----HTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHH
Confidence            35799999999  9999999999999     899999999975310     00 01247889999999998877776   


Q ss_pred             ----cCCCeeEEEEeccC--------C--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccC
Q 016047           93 ----QLTDVTHIFYVTWT--------N--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~--------~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                          .+|.|+|+|+....        .  .++....+++|+.|+.++++++.+.-.+-.+++++||...+       .. 
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-------~~-  153 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE-------KV-  153 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT-------SB-
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEeccccc-------CC-
Confidence                56789998875321        1  11456788999999999999998652112366766642211       10 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcC
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  231 (396)
                          .         + ....|+..|.     ...+.  ....|+++.+++|+.|+++........ ..+..  .+.+  .
T Consensus       154 ----~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~--~~~~--~  214 (261)
T 2wyu_A          154 ----V---------P-KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF-TKMYD--RVAQ--T  214 (261)
T ss_dssp             ----C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTH-HHHHH--HHHH--H
T ss_pred             ----C---------C-CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcccc-HHHHH--HHHh--c
Confidence                0         1 1112554322     22221  134589999999999998421111111 11100  0111  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeHHH
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKWKH  285 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~~e  285 (396)
                      .|+.         .   ..+..++|..+++++..+  ...|++|++.++...+..|
T Consensus       215 ~p~~---------~---~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          215 APLR---------R---NITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             STTS---------S---CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             CCCC---------C---CCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence            1211         1   123445577777776532  2348899998876555433

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.58  E-value=6.5e-15  Score=133.51  Aligned_cols=214  Identities=10%  Similarity=0.020  Sum_probs=130.2

Q ss_pred             CCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+  |+||.+++++|++     +|++|++++|++...     .. ......++.+|++|+++++++++    
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHR-----EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHH-----TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHH-----CCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999  9999999999999     899999999976210     00 01234789999999998887776    


Q ss_pred             ---cCCCeeEEEEeccC-----------CCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccC
Q 016047           93 ---QLTDVTHIFYVTWT-----------NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~-----------~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                         .+|.++|+|+....           ..++....+++|+.|+.++++++.+...+-.+++++||...+       .. 
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-------~~-  155 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-------RA-  155 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-------SB-
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhc-------cC-
Confidence               45778888875321           112456688999999999999998752112467766642211       10 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHH-----HHHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcC
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLE-----DILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e-----~~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  231 (396)
                          .         + ....|+..     .+...+.  ....|+++.+++|+.|.++........ ..+..  .+..  .
T Consensus       156 ----~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~--~~~~--~  216 (265)
T 1qsg_A          156 ----I---------P-NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF-RKMLA--HCEA--V  216 (265)
T ss_dssp             ----C---------T-TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH-HHHHH--HHHH--H
T ss_pred             ----C---------C-CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccccc-HHHHH--HHHh--c
Confidence                0         1 01126542     2222211  135689999999999998421111111 11100  0111  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeee
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFK  282 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s  282 (396)
                      .|+.         .   ..+..++|..+++++..+  ...|++|++.++...+
T Consensus       217 ~p~~---------~---~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          217 TPIR---------R---TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             STTS---------S---CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             CCCC---------C---CCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            1211         1   223445578888777542  2348899998875443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.57  E-value=1.2e-14  Score=132.01  Aligned_cols=207  Identities=18%  Similarity=0.121  Sum_probs=131.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|+++++++++    
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAA-----AGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999854211       0 012467899999999998877766    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +.    
T Consensus       103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~~----  172 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM------GN----  172 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH------CC----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC------CC----
Confidence               5788999987543221      145667899999999999987543  11235677776432221      10    


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                                 + ....|+..|.        +...+ ...|+++.+++|+.|..+  ... ....     .....  ..|
T Consensus       173 -----------~-~~~~Y~asK~a~~~l~~~la~e~-~~~gi~vn~v~PG~v~T~--~~~-~~~~-----~~~~~--~~p  229 (269)
T 4dmm_A          173 -----------P-GQANYSAAKAGVIGLTKTVAKEL-ASRGITVNAVAPGFIATD--MTS-ELAA-----EKLLE--VIP  229 (269)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBTTS--CSC-HHHH-----HHHGG--GCT
T ss_pred             -----------C-CchhHHHHHHHHHHHHHHHHHHH-hhhCcEEEEEEECCCcCc--ccc-cccH-----HHHHh--cCC
Confidence                       1 1122664333        22222 346899999999999883  211 1100     00011  112


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCCC---CCCceeeecCCCee
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY---AKNEAFNCNNGDVF  281 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~---~~g~~~ni~~~~~~  281 (396)
                      +.            ...+..++|.++++++.++.   ..|+++++.+|..+
T Consensus       230 ~~------------r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          230 LG------------RYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             TS------------SCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             CC------------CCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            11            12234455788888776532   34899999877544

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.57  E-value=2.8e-14  Score=131.32  Aligned_cols=156  Identities=13%  Similarity=0.069  Sum_probs=108.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....         .....++.++.+|++|+++++++++   
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYAR-----EGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            58999999999999999999999     899999998863210         0012468899999999988776664   


Q ss_pred             ----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          .+|.++|+|+......       ++....+++|+.|+.++++++.....+-.+++++||...|       ...   
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~-------~~~---  193 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAY-------QPS---  193 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGT-------SCC---
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhc-------cCC---
Confidence                5788999987533211       1456788999999999999998764333477777653322       110   


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                                 + ....|+..|.        +...+ ...|+++..++|+.|.++
T Consensus       194 -----------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t~  235 (294)
T 3r3s_A          194 -----------P-HLLDYAATKAAILNYSRGLAKQV-AEKGIRVNIVAPGPIWTA  235 (294)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCSH
T ss_pred             -----------C-CchHHHHHHHHHHHHHHHHHHHH-hhcCeEEEEEecCcCccc
Confidence                       1 1122654322        22222 345899999999999983

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.57  E-value=2.5e-14  Score=131.07  Aligned_cols=209  Identities=14%  Similarity=0.106  Sum_probs=128.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|+++++++++     
T Consensus        44 ~k~vlITGasggIG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAK-----SVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTT-----TSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----cCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            47999999999999999999999     899999988864321      0 012467899999999998887764     


Q ss_pred             --cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.|+|+|+.....    .  ++....+++|+.|+.++++++.+.  ..+..+++++||...+      ++.     
T Consensus       119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~------~~~-----  187 (285)
T 2c07_A          119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL------TGN-----  187 (285)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHH------HCC-----
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhc------cCC-----
Confidence              578899998754321    1  145667899999988888777543  1125678877754322      110     


Q ss_pred             CCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCce
Q 016047          163 PPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLR  235 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~  235 (396)
                                + ....|+..|.     ...+.  ....|++++++||+.+.++......   ..+.  .....  ..|+ 
T Consensus       188 ----------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~--~~~~~--~~~~-  248 (285)
T 2c07_A          188 ----------V-GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---EQIK--KNIIS--NIPA-  248 (285)
T ss_dssp             ----------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---HHHH--HHHHT--TCTT-
T ss_pred             ----------C-CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---HHHH--HHHHh--hCCC-
Confidence                      0 1122654332     22211  1345899999999999884211111   1110  00011  1111 


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          236 FPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       236 ~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                        +      .+   .+..++|+++++++..+.  ..|++|++.++.
T Consensus       249 --~------~~---~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          249 --G------RM---GTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             --S------SC---BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             --C------CC---CCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence              1      12   334455777777775432  358889987764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.57  E-value=2.8e-14  Score=127.94  Aligned_cols=153  Identities=13%  Similarity=0.052  Sum_probs=105.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~   96 (396)
                      ++|+||||||+|+||.+++++|++     +|++|++++|++...    ..+..+.+|++|+++++++++       .+|.
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAA-----DGHKVAVTHRGSGAP----KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSSCCC----TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChHHH----HHhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            458999999999999999999999     899999999976432    233358999999998877665       4688


Q ss_pred             eeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           97 VTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        97 V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      ++|+|+.....    .  ++....+++|+.|+.++++++.+.  ..+..+++++||...+      ++.           
T Consensus        85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~------~~~-----------  147 (247)
T 1uzm_A           85 LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL------WGI-----------  147 (247)
T ss_dssp             EEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhc------cCC-----------
Confidence            99998753221    1  145678899999999999987653  1235678877653221      110           


Q ss_pred             CCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceee
Q 016047          169 MPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       169 ~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                          + ....|+..|.     .....  ....|+++.+++|+.|.+
T Consensus       148 ----~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  188 (247)
T 1uzm_A          148 ----G-NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDT  188 (247)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             ----C-CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcc
Confidence                0 1122654332     22211  134689999999999977

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.57  E-value=1.8e-16  Score=148.18  Aligned_cols=164  Identities=12%  Similarity=0.070  Sum_probs=108.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-------EEEEEeCCCC--C-C----CCCCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARRPK--P-N----WNADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~--~-~----~~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      +++||+||||+||||++++..|++     +|+       +|+++++.+.  . .    ...+..+.++ +|+.+.+++.+
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~   76 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKV   76 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHH
Confidence            346899999999999999999998     665       8999998631  0 0    0001122333 67777667788


Q ss_pred             HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCCCCcc-C
Q 016047           90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT-E  167 (396)
Q Consensus        90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~-E  167 (396)
                      +++++|.|+|+|+.......++.+.++.|+.+|++++++|++.+ ++. ++++.|      ++....       .++. |
T Consensus        77 a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~-~vvv~s------np~~~~-------~~~~~~  142 (327)
T 1y7t_A           77 AFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDV-KVLVVG------NPANTN-------ALIAYK  142 (327)
T ss_dssp             HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTC-EEEECS------SSHHHH-------HHHHHH
T ss_pred             HhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEeC------Cchhhh-------HHHHHH
Confidence            89999999999986554445678889999999999999999875 443 333332      111000       1111 2


Q ss_pred             CC-CCCCCCC---cchhHHHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047          168 DM-PRLDAPN---FYYTLEDILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       168 ~~-p~~~~~~---~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      .. +..|...   .....|++...+. +..|++.+++||.+|||+
T Consensus       143 ~~~~~~p~~~yg~tkl~~er~~~~~a-~~~g~~~~~vr~~~V~G~  186 (327)
T 1y7t_A          143 NAPGLNPRNFTAMTRLDHNRAKAQLA-KKTGTGVDRIRRMTVWGN  186 (327)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHH-HHHTCCGGGEECCEEEBC
T ss_pred             HcCCCChhheeccchHHHHHHHHHHH-HHhCcChhheeeeEEEcC
Confidence            11 1112212   1122466666554 667899999999999994

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.57  E-value=1.5e-14  Score=131.97  Aligned_cols=216  Identities=15%  Similarity=0.058  Sum_probs=131.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|+++++++++       .
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAK-----NGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGR  101 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999     8999999999753210    012467899999999998877766       5


Q ss_pred             CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+       ..     .  
T Consensus       102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~--  167 (277)
T 4dqx_A          102 VDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT-------SA-----I--  167 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGT-------SC-----C--
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhC-------cC-----C--
Confidence            788999988533211      134667899999999998887543  1224577777643222       10     0  


Q ss_pred             cCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcch-hHHHHHHHHHHhhhcCCCcee
Q 016047          166 TEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMN-LVGALCVYAAVCKHEGIPLRF  236 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~  236 (396)
                             + ....|+..|.        +...+ ...|+++..++|+.|..+....... ............  ...|   
T Consensus       168 -------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~---  233 (277)
T 4dqx_A          168 -------A-DRTAYVASKGAISSLTRAMAMDH-AKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFN--ARAV---  233 (277)
T ss_dssp             -------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHH--TTST---
T ss_pred             -------C-CChhHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHH--hcCc---
Confidence                   1 1123664322        22222 3458999999999998731000000 000000000000  0111   


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCeee
Q 016047          237 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVFK  282 (396)
Q Consensus       237 ~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~s  282 (396)
                               .....+..++|.++++++....  ..|+++++.+|..++
T Consensus       234 ---------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          234 ---------MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             ---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             ---------ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence                     1112345556888888775432  358999998876543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.57  E-value=2.9e-14  Score=128.85  Aligned_cols=158  Identities=18%  Similarity=0.097  Sum_probs=108.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHH-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL-----   91 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~-----   91 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|++...      . ....++.++.+|++|++++++++     
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELAS-----LGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN   82 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 01236788999999999887776     


Q ss_pred             ---hcCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           92 ---SQLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        92 ---~~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         ..+|.++|+|+.....      .++....+++|+.|+.++++++...  ..+..+++++||...+       ..   
T Consensus        83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~---  152 (260)
T 2ae2_A           83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA-------LA---  152 (260)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT-------SC---
T ss_pred             HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc-------cC---
Confidence               3578899998753221      1145667899999999999988542  1235678877643211       10   


Q ss_pred             CCCCccCCCCCCCCCCcchhHH-----HHHHHHhh--cCCCeeEEEEcCCceeec
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLE-----DILFEEVE--KKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e-----~~l~~~~~--~~~~~~~~ilRp~~v~G~  208 (396)
                        .         + ....|+..     .+......  ...|+++.+++|+.+.++
T Consensus       153 --~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  195 (260)
T 2ae2_A          153 --V---------P-YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS  195 (260)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred             --C---------C-CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence              0         1 11226543     23222221  235899999999999873

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.57  E-value=1.9e-14  Score=129.88  Aligned_cols=215  Identities=11%  Similarity=0.020  Sum_probs=130.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....       .....++.++.+|++|+++++++++    
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAK-----EGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDE   79 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321       0112478899999999998877765    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.++|+|+......      ++....+++|+.|+.++++++.+.   .....+++++||...+.      +    
T Consensus        80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~----  149 (257)
T 3imf_A           80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD------A----  149 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS------C----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc------C----
Confidence               5688999987433211      145667899999999999988432   11245677666432111      0    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                        .         + ....|+..|.     .   ...+....|+++..++|+.|.++...........+..  ...  ...
T Consensus       150 --~---------~-~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~--~~~--~~~  213 (257)
T 3imf_A          150 --G---------P-GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAK--RTI--QSV  213 (257)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSH--HHH--TTS
T ss_pred             --C---------C-CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHH--HHH--hcC
Confidence              0         1 1122554222     2   2111124489999999999988421111000000000  000  011


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCee
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  281 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~  281 (396)
                      |            .....+..++|.++++++..+.  ..|+++++.+|..+
T Consensus       214 p------------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  252 (257)
T 3imf_A          214 P------------LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHL  252 (257)
T ss_dssp             T------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTS
T ss_pred             C------------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCccc
Confidence            1            1112344556888888775432  35899999887654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.57  E-value=1.1e-14  Score=131.20  Aligned_cols=219  Identities=13%  Similarity=0.064  Sum_probs=133.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--C--CCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N--ADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+.....  .  ...++.++.+|++|+++++++++       
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVE-----GGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLG   81 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            458999999999999999999999     8999999999753210  0  01467899999999988776554       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      .+|.++|+|+......      ++....+++|+.|+.++++++...-.+-.+++++||...+       ..     .   
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~---  146 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADE-------GG-----H---  146 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGS-------SB-----C---
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhc-------CC-----C---
Confidence            4677888877533211      1456678999999999999987652222466666543211       11     0   


Q ss_pred             CCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCC-cchhHHHHHHHHHHhhhcCCCceec
Q 016047          167 EDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYS-LMNLVGALCVYAAVCKHEGIPLRFP  237 (396)
Q Consensus       167 E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~  237 (396)
                            + ....|+..|.        +...+ ...|+++..++|+.|..+.... .... .....+..... ...|+.  
T Consensus       147 ------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~-~~~p~~--  214 (255)
T 4eso_A          147 ------P-GMSVYSASKAALVSFASVLAAEL-LPRGIRVNSVSPGFIDTPTKGVAGITE-AERAEFKTLGD-NITPMK--  214 (255)
T ss_dssp             ------T-TBHHHHHHHHHHHHHHHHHHHHT-GGGTCEEEEEEECSBCCSSTTCTTSCH-HHHHHHHHHHH-HHSTTS--
T ss_pred             ------C-CchHHHHHHHHHHHHHHHHHHHH-hhhCcEEEEEecCcccCcccccccCCh-hhHHHHHHHHh-ccCCCC--
Confidence                  1 1123654322        22222 3458999999999999843211 1111 00101111001 011211  


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcC-CCCCCceeeecCCCeeeHH
Q 016047          238 GTKAAWECYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGDVFKWK  284 (396)
Q Consensus       238 g~~~~~~~~~~~~da~~la~~~i~~~~~-~~~~g~~~ni~~~~~~s~~  284 (396)
                             .   ..+..++|.++++++.. ....|+++++.+|...++.
T Consensus       215 -------r---~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          215 -------R---NGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             -------S---CBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred             -------C---CcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence                   1   22345557777777654 2345899999887765544

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.56  E-value=7.4e-14  Score=123.13  Aligned_cols=201  Identities=12%  Similarity=0.050  Sum_probs=124.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh---cCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---QLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~~~V~h~  100 (396)
                      .+|++|||||+|+||.+++++|.+     +|++|++++|+..             +|++|+++++++++   .+|.++|+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~-------------~D~~~~~~v~~~~~~~g~id~lv~n   66 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLES-----EHTIVHVASRQTG-------------LDISDEKSVYHYFETIGAFDHLIVT   66 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCS-----TTEEEEEESGGGT-------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEecCCcc-------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence            357899999999999999999999     8999999998742             89999998888776   46678888


Q ss_pred             EEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047          101 FYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus       101 a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      |+......       ++....+++|+.|+.++++++.+...+-.+++++||...+       ..              .+
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~-------~~--------------~~  125 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR-------KV--------------VA  125 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT-------SC--------------CT
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc-------cC--------------CC
Confidence            77532111       1456678999999999999988752222356666542211       10              01


Q ss_pred             CCCcchhHHH-----HHHHHhhcCC-CeeEEEEcCCceeecCCCCcchh-HHHHHHHHHHhhhcCCCceecCCcccccee
Q 016047          174 APNFYYTLED-----ILFEEVEKKE-ELSWSVHRPDTIFGFSPYSLMNL-VGALCVYAAVCKHEGIPLRFPGTKAAWECY  246 (396)
Q Consensus       174 ~~~~~y~~e~-----~l~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~  246 (396)
                       ....|+..|     +.+... .+. .+++..++|+.|..+........ ...+  ......  ..|+.         . 
T Consensus       126 -~~~~Y~asK~a~~~~~~~la-~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~--~~~~~---------~-  189 (223)
T 3uce_A          126 -NTYVKAAINAAIEATTKVLA-KELAPIRVNAISPGLTKTEAYKGMNADDRDAM--YQRTQS--HLPVG---------K-  189 (223)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHH-HHHTTSEEEEEEECSBCSGGGTTSCHHHHHHH--HHHHHH--HSTTC---------S-
T ss_pred             -CchHHHHHHHHHHHHHHHHH-HhhcCcEEEEEEeCCCcchhhhhcchhhHHHH--HHHHhh--cCCCC---------C-
Confidence             112365432     222222 221 29999999999988422211111 1111  000111  11211         1 


Q ss_pred             eecccHHHHHHHHHHHhcCCCCCCceeeecCCCee
Q 016047          247 SIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVF  281 (396)
Q Consensus       247 ~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~  281 (396)
                        ..+..++|.++++++......|+++++.+|..+
T Consensus       190 --~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          190 --VGEASDIAMAYLFAIQNSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             --CBCHHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred             --ccCHHHHHHHHHHHccCCCCCCcEEEecCCeec
Confidence              223445577888777665667899999877543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.56  E-value=1.8e-14  Score=130.69  Aligned_cols=214  Identities=14%  Similarity=0.024  Sum_probs=128.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~   96 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....    .....+.+|++|.+++.++++       .+|.
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~-----~G~~V~~~~r~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRA-----AGARVAVADRAVAGI----AADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEECSSCCTTS----CCSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHH----HhhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            458999999999999999999999     899999999976542    122456899999987766554       5788


Q ss_pred             eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      ++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +      .     
T Consensus        98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------~------~-----  160 (266)
T 3uxy_A           98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR------P------G-----  160 (266)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB------C------C-----
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC------C------C-----
Confidence            999988543211      145667899999999999988432  11245777776432211      0      0     


Q ss_pred             CCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchh-HHHHHHHHHHhhhcCCCceecCCc
Q 016047          169 MPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNL-VGALCVYAAVCKHEGIPLRFPGTK  240 (396)
Q Consensus       169 ~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~g~~  240 (396)
                          + ....|+..|.     ...+.  ....|+++.+++|+.|.++........ ......... ......|       
T Consensus       161 ----~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~p-------  227 (266)
T 3uxy_A          161 ----P-GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVA-ELGRTVP-------  227 (266)
T ss_dssp             ----T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHH-HHHTTST-------
T ss_pred             ----C-CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHH-HHHhcCC-------
Confidence                1 1223664322     22211  134589999999999988310000000 000000000 0000111       


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCee
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  281 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~  281 (396)
                           .....+..++|.++++++..+.  ..|+++++.+|..+
T Consensus       228 -----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          228 -----LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             -----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             -----CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence                 1122344556888888776433  34899999887654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.56  E-value=5.1e-15  Score=132.39  Aligned_cols=208  Identities=13%  Similarity=0.077  Sum_probs=123.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCeeE-EEecCCChHHHHHHHh----
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEY-VQCDVSDPEETQAKLS----   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~-~~~Dl~d~~~~~~~~~----   92 (396)
                      |+||||||+|+||++++++|++     +|++|+++ +|++...      . ....++.. +.+|++|+++++++++    
T Consensus         2 k~vlITGasggiG~~~a~~l~~-----~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAE-----DGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAE   76 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHT-----TTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999     89999998 6764221      0 01134566 8999999998877654    


Q ss_pred             ---cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         ++|.|+|+|+.....      .++....+++|+.|+.++++++.+.  ..+..+++++||...+      ++.    
T Consensus        77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------~~~----  146 (245)
T 2ph3_A           77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGI------LGN----  146 (245)
T ss_dssp             HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH------HCC----
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhc------cCC----
Confidence               688899998753221      1144667899999955555544332  0125778877753222      110    


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  234 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  234 (396)
                                 + ....|+..|.     ...+.  ....+++++++||+.++++.....   ...+.  ..+..  ..|.
T Consensus       147 -----------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~--~~~~~--~~~~  207 (245)
T 2ph3_A          147 -----------P-GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---PQEVK--EAYLK--QIPA  207 (245)
T ss_dssp             -----------S-SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHH--HHHHH--TCTT
T ss_pred             -----------C-CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---CHHHH--HHHHh--cCCC
Confidence                       0 1122554332     22221  034589999999999998421111   01110  00111  1111


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                               ..+   .+..++|+++++++..+.  ..|++|++.++.
T Consensus       208 ---------~~~---~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          208 ---------GRF---GRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             ---------CSC---BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             ---------CCC---cCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence                     112   244455788777765432  348899998753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.56  E-value=4.9e-15  Score=132.50  Aligned_cols=157  Identities=11%  Similarity=0.069  Sum_probs=108.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-------EEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      ++|+||||||+|+||.+++++|++     +|+       +|++++|++...      . ....++.++.+|++|++++.+
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~-----~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   75 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFAR-----AARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRR   75 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHH-----HTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----hcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHH
Confidence            357899999999999999999998     788       999999975321      0 012467899999999998887


Q ss_pred             HHh-------cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccc
Q 016047           90 KLS-------QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEA  154 (396)
Q Consensus        90 ~~~-------~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~  154 (396)
                      +++       .+|.|+|+|+.....      ..+....+++|+.|+.++++++...  ..+..+++++||...|      
T Consensus        76 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------  149 (244)
T 2bd0_A           76 LTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT------  149 (244)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT------
T ss_pred             HHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhc------
Confidence            776       578899998754321      1145667899999999999987543  1125677877643222      


Q ss_pred             cccCCCCCCCccCCCCCCCCCCcchhHHH-----HHH---HHhhcCCCeeEEEEcCCceeec
Q 016047          155 FGKIKPYDPPFTEDMPRLDAPNFYYTLED-----ILF---EEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       155 ~g~~~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~---~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                       ..     .         + ....|+..|     +..   ... ...|++++++||+.|+++
T Consensus       150 -~~-----~---------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~  194 (244)
T 2bd0_A          150 -KA-----F---------R-HSSIYCMSKFGQRGLVETMRLYA-RKCNVRITDVQPGAVYTP  194 (244)
T ss_dssp             -SC-----C---------T-TCHHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCBCST
T ss_pred             -CC-----C---------C-CCchhHHHHHHHHHHHHHHHHHh-hccCcEEEEEECCCccch
Confidence             10     0         1 112265433     222   222 467899999999999993

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.56  E-value=1.9e-14  Score=130.03  Aligned_cols=157  Identities=13%  Similarity=0.032  Sum_probs=107.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC-CC------CC--CCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP-NW------NA--DHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-~~------~~--~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|++.. ..      ..  ..++.++.+|++|+++++++++   
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   78 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAA-----QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV   78 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----cCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            57999999999999999999999     89999999997643 10      00  2467889999999998877765   


Q ss_pred             ----cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.++|+|+.....      .++....+++|+.|+.++++++...  ..+..+++++||...+.      +    
T Consensus        79 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~----  148 (260)
T 1x1t_A           79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV------A----  148 (260)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C----
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc------C----
Confidence                578899998753321      1145678899999999998887643  11246788776432221      1    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeec
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                        .         + ....|+..|.     .....  ....|+++.+++|+.|.++
T Consensus       149 --~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  191 (260)
T 1x1t_A          149 --S---------A-NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP  191 (260)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred             --C---------C-CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCc
Confidence              0         1 1122654322     22211  1356899999999999884

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.56  E-value=4.2e-14  Score=127.75  Aligned_cols=156  Identities=10%  Similarity=-0.014  Sum_probs=106.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC---CCCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN---ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~---~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|++...      ..   ...++.++.+|++|+++++++++   
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELAR-----NGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKAR   81 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999975321      00   01268899999999999888776   


Q ss_pred             ---cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         ++|.|+|+|+.....      .++....+++|+.|+.++++++.+.  ..+..+++++||...|       ..    
T Consensus        82 ~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~----  150 (260)
T 2z1n_A           82 DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLL-------RP----  150 (260)
T ss_dssp             HTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------SC----
T ss_pred             HhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhc-------CC----
Confidence               578899998743221      1145677899999997777766532  1125678877653322       10    


Q ss_pred             CCCccCCCCCCCCCCcchhH-----HH---HHHHHhhcCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTL-----ED---ILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~-----e~---~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                       .         + ....|+.     +.   .+...+ ...|+++.+++|+.|+++
T Consensus       151 -~---------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~  193 (260)
T 2z1n_A          151 -W---------Q-DLALSNIMRLPVIGVVRTLALEL-APHGVTVNAVLPSLILTD  193 (260)
T ss_dssp             -C---------T-TBHHHHHHTHHHHHHHHHHHHHH-GGGTEEEEEEEECHHHHC
T ss_pred             -C---------C-CCchhHHHHHHHHHHHHHHHHHH-hhhCeEEEEEEECCcccc
Confidence             0         1 1122553     22   222222 345899999999999984

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.56  E-value=2.8e-14  Score=128.78  Aligned_cols=212  Identities=12%  Similarity=0.035  Sum_probs=129.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      +|+||||||+|+||.+++++|++     +|++|+++ .|+....      . ....++.++.+|++|+++++++++.   
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~-----~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAE-----NGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDE   78 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999     89999887 5653211      0 0124788999999999988777654   


Q ss_pred             ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                          +|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+       ..    
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-------~~----  147 (258)
T 3oid_A           79 TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSI-------RY----  147 (258)
T ss_dssp             HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGT-------SB----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhC-------CC----
Confidence                488999887432211      134567899999999999988543  1224567777643211       10    


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  234 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  234 (396)
                                .+ ....|+..|.     .....  ....|+++..++|+.|..+........ ..+.  .....  ..|+
T Consensus       148 ----------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~--~~~~~--~~p~  211 (258)
T 3oid_A          148 ----------LE-NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR-EDLL--EDARQ--NTPA  211 (258)
T ss_dssp             ----------CT-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTH-HHHH--HHHHH--HCTT
T ss_pred             ----------CC-CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccC-HHHH--HHHHh--cCCC
Confidence                      01 1123664322     22221  134579999999999988421111111 1110  00111  1121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCe
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDV  280 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~  280 (396)
                         +      .   ..+..++|.++++++..+.  ..|+++++.+|..
T Consensus       212 ---~------r---~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~  247 (258)
T 3oid_A          212 ---G------R---MVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRS  247 (258)
T ss_dssp             ---S------S---CBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred             ---C------C---CcCHHHHHHHHHHHhCcccCCccCCEEEECCCcc
Confidence               1      1   2234556888888776533  3589999987654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.56  E-value=3.7e-14  Score=130.37  Aligned_cols=211  Identities=18%  Similarity=0.150  Sum_probs=130.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....      ..  ...++.++.+|++|+++++++++    
T Consensus        41 ~k~vlVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           41 ARSVLVTGGTKGIGRGIATVFAR-----AGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999986432      10  11468899999999988776655    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+     .++.    
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~-----~~~~----  186 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGP-----VTGY----  186 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTT-----TBBC----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhc-----cCCC----
Confidence               4688999887543211      145678899999999999988422  1124567776642211     0110    


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                                 + ....|+..|.     .   ...+ ...|+++.+++|+.|+++.....   ...+.  ..+.  ...|
T Consensus       187 -----------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t~~~~~~---~~~~~--~~~~--~~~p  246 (293)
T 3rih_A          187 -----------P-GWSHYGASKAAQLGFMRTAAIEL-APRGVTVNAILPGNILTEGLVDM---GEEYI--SGMA--RSIP  246 (293)
T ss_dssp             -----------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCCHHHHHT---CHHHH--HHHH--TTST
T ss_pred             -----------C-CCHHHHHHHHHHHHHHHHHHHHH-hhhCeEEEEEecCCCcCcchhhc---cHHHH--HHHH--hcCC
Confidence                       1 1123654322     2   2222 34689999999999999321100   01110  0011  1222


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCee
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  281 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~  281 (396)
                      +.         .   ..+..++|..+++++...  ...|+++++.+|..+
T Consensus       247 ~~---------r---~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          247 MG---------M---LGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             TS---------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CC---------C---CCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            11         1   123344577777777532  345899999876543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.56  E-value=8.2e-14  Score=126.97  Aligned_cols=159  Identities=13%  Similarity=0.018  Sum_probs=108.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++++|++|+++++++++    
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAE-----AGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975432      0 012467899999999998887776    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.++|+|+......      ++....+++|+.|+.++++++.+..   ..-.+++++||...+      .+.   
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~------~~~---  176 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGH------IIN---  176 (276)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------SCC---
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhc------ccC---
Confidence               6788999987543221      1345677999999999999876541   112456666542211      110   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeec
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                                 .+.....|+..|.     .   ...+ ...|+++..++|+.|..+
T Consensus       177 -----------~~~~~~~Y~asKaa~~~l~~~la~e~-~~~gIrvn~v~PG~v~T~  220 (276)
T 3r1i_A          177 -----------IPQQVSHYCTSKAAVVHLTKAMAVEL-APHQIRVNSVSPGYIRTE  220 (276)
T ss_dssp             -----------CSSCCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCST
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHH-hhcCcEEEEEeeCCCcCC
Confidence                       0111223664322     2   2222 346899999999999883

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.56  E-value=4.5e-14  Score=128.22  Aligned_cols=211  Identities=13%  Similarity=0.077  Sum_probs=131.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....        .....++.++.+|++|+++++++++    
T Consensus        25 ~k~vlITGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           25 KRVAFVTGGMGGLGAAISRRLHD-----AGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHT-----TTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999     899999998554211        0112578899999999998877665    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +     
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~-----  168 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR------G-----  168 (269)
T ss_dssp             HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------C-----
T ss_pred             HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc------C-----
Confidence               6788999987543211      145667899999999999887543  11245777776533221      1     


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                       .         + ....|+..|.        +...+ ...|+++.+++|+.|..+.....   ....      ..  . .
T Consensus       169 -~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~---~~~~------~~--~-~  224 (269)
T 3gk3_A          169 -A---------F-GQANYASAKAGIHGFTKTLALET-AKRGITVNTVSPGYLATAMVEAV---PQDV------LE--A-K  224 (269)
T ss_dssp             -C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCTTTTC------------------C-C
T ss_pred             -C---------C-CcchHHHHHHHHHHHHHHHHHHh-hhcCCEEEEEecCcccchhhhhh---chhH------HH--H-H
Confidence             0         0 1123664332        22222 34589999999999987321111   0000      00  0 0


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCee
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF  281 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~  281 (396)
                       ...  ..   ......+..++|..+++++..+.  ..|+++++.+|..+
T Consensus       225 -~~~--~~---~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          225 -ILP--QI---PVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             -SGG--GC---TTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred             -hhh--cC---CcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence             000  00   11122345556888888776543  45899999887654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.56  E-value=3e-14  Score=130.21  Aligned_cols=211  Identities=12%  Similarity=0.047  Sum_probs=126.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      ++|++|||||+|+||.+++++|++     +|++|++++|+....       . ....++.++++|++|+++++++++   
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  102 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAA-----SGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV  102 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            357899999999999999999999     899999999754211       0 012478899999999988777665   


Q ss_pred             ----cCCCeeEEEEeccCC--------CccHHHHHHhHHHHHHHHHHHHcccC-----CCcceEEEeccceeeccccccc
Q 016047           93 ----QLTDVTHIFYVTWTN--------RSTEAENCKINGSMFRNVLRAVIPNA-----PNLRHVCLQTGTKHYLGPFEAF  155 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~--------~~~~~~~~~~nv~gt~~ll~a~~~~~-----~~~~~~~~~s~~~~y~ss~~~~  155 (396)
                          .+|.++|+|+.....        .++....+++|+.|+.++++++....     ....+++++||...+.      
T Consensus       103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------  176 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM------  176 (280)
T ss_dssp             HHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------
T ss_pred             HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc------
Confidence                678899998752111        11456678999999999988876541     1134677776433221      


Q ss_pred             ccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHh
Q 016047          156 GKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVC  227 (396)
Q Consensus       156 g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~  227 (396)
                      +.               + ....|+..|.        +...+ ...|+++..++|+.|..+......   ...      .
T Consensus       177 ~~---------------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~~---~~~------~  230 (280)
T 4da9_A          177 TS---------------P-ERLDYCMSKAGLAAFSQGLALRL-AETGIAVFEVRPGIIRSDMTAAVS---GKY------D  230 (280)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCBCC--------------------
T ss_pred             CC---------------C-CccHHHHHHHHHHHHHHHHHHHH-HHhCcEEEEEeecCCcCCchhhcc---hhH------H
Confidence            10               1 1122654222        22222 457899999999999883211100   000      0


Q ss_pred             hhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCe
Q 016047          228 KHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDV  280 (396)
Q Consensus       228 ~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~  280 (396)
                      .....      ..   .......+..++|.++++++..+.  ..|+++++.+|..
T Consensus       231 ~~~~~------~~---~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          231 GLIES------GL---VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             --------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             HHHhh------cC---CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            00000      00   011122344556888888776543  3589999987654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.56  E-value=7.6e-15  Score=130.45  Aligned_cols=157  Identities=12%  Similarity=0.012  Sum_probs=102.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      |+|+||||||+|+||++++++|++     +|++|++++|++...  . ....++.++.+|++|+++++++++       .
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHA-----KGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            668999999999999999999999     899999999975321  0 001267899999999988877665       5


Q ss_pred             CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.|+|+|+......      ++....+++|+.|+.++++++.+.  ..+..+++++||...|       ..        
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~~--------  143 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGK-------NP--------  143 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTT-------SC--------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhc-------CC--------
Confidence            688999987532211      145667899999997666654332  1235788877643211       10        


Q ss_pred             cCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceee
Q 016047          166 TEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                           . + ....|+..|.     .....  ....|++++++||+.+..
T Consensus       144 -----~-~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  185 (234)
T 2ehd_A          144 -----F-K-GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDT  185 (234)
T ss_dssp             -----C-T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----
T ss_pred             -----C-C-CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcC
Confidence                 0 1 1123664332     22211  134689999999998876

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.55  E-value=2.4e-14  Score=130.74  Aligned_cols=217  Identities=14%  Similarity=0.050  Sum_probs=134.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....       .....++.++.+|++|+++++++++    
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAR-----EGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321       1112468899999999998877665    


Q ss_pred             ---cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.++|+|+......       ++....+++|+.|+.++++++...  ..+-.+++++||...+.     .+    
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----~~----  152 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT-----AG----  152 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT-----BC----
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc-----CC----
Confidence               5788999987532211       145678899999999999987654  11234677766432210     00    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEG  231 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~  231 (396)
                                 .+ ....|+..|.        +...+ ...|+++..++|+.|.++...... .........  +.  ..
T Consensus       153 -----------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~--~~  215 (280)
T 3tox_A          153 -----------FA-GVAPYAASKAGLIGLVQALAVEL-GARGIRVNALLPGGTDTPANFANLPGAAPETRGF--VE--GL  215 (280)
T ss_dssp             -----------CT-TCHHHHHHHHHHHHHHHHHHHHH-HTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHH--HH--TT
T ss_pred             -----------CC-CchhHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEECCCCCchhhhhccccCHHHHHH--Hh--cc
Confidence                       01 1122654322        22222 356899999999999984211101 000111000  01  11


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeH
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  283 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~  283 (396)
                      .|+            ....+..++|.++++++...  ...|+++++.+|..++.
T Consensus       216 ~p~------------~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          216 HAL------------KRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             STT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             Ccc------------CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            111            11234455688888877543  24589999988765543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.55  E-value=6.2e-14  Score=127.79  Aligned_cols=208  Identities=14%  Similarity=0.045  Sum_probs=129.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC-CCCCC------CC--CCCCeeEEEecCCCh----HHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR-RPKPN------WN--ADHLVEYVQCDVSDP----EETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R-~~~~~------~~--~~~~v~~~~~Dl~d~----~~~~~~~   91 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++| +....      ..  ...++.++.+|++|+    +++++++
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQ-----QGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDII   85 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHH
Confidence            57999999999999999999999     8999999999 53211      00  024688999999999    8887766


Q ss_pred             h-------cCCCeeEEEEeccCCC-----------------ccHHHHHHhHHHHHHHHHHHHcccC-CCc------ceEE
Q 016047           92 S-------QLTDVTHIFYVTWTNR-----------------STEAENCKINGSMFRNVLRAVIPNA-PNL------RHVC  140 (396)
Q Consensus        92 ~-------~~~~V~h~a~~~~~~~-----------------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~------~~~~  140 (396)
                      +       .+|.++|+|+......                 ++....+++|+.|+.++++++.+.. .+.      .+++
T Consensus        86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv  165 (276)
T 1mxh_A           86 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence            5       6788999988532211                 2334678999999999999888752 122      5777


Q ss_pred             EeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCc
Q 016047          141 LQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSL  213 (396)
Q Consensus       141 ~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~  213 (396)
                      ++||...|       ..     .         + ....|+..|.     ...+.  ....|+++.+++|+.|.++  . .
T Consensus       166 ~isS~~~~-------~~-----~---------~-~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~-~  220 (276)
T 1mxh_A          166 NLCDAMTD-------LP-----L---------P-GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--P-A  220 (276)
T ss_dssp             EECCGGGG-------SC-----C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--S-S
T ss_pred             EECchhhc-------CC-----C---------C-CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--c-c
Confidence            77643322       10     0         1 1122654322     22211  1345899999999999994  2 1


Q ss_pred             chhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          214 MNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       214 ~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                      ..  .....  ....  ..|+   +     +.   ..+..++|..+++++..+.  ..|+++++.++.
T Consensus       221 ~~--~~~~~--~~~~--~~p~---~-----r~---~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          221 MP--QETQE--EYRR--KVPL---G-----QS---EASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             SC--HHHHH--HHHT--TCTT---T-----SC---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CC--HHHHH--HHHh--cCCC---C-----CC---CCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence            11  11100  0111  1121   1     01   2234555788887775422  348889987763

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.55  E-value=3.2e-14  Score=129.04  Aligned_cols=209  Identities=16%  Similarity=0.142  Sum_probs=130.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh-
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      ..|+|+||||||+|+||.+++++|++     +|++|+++.++....       . ....++.++.+|++|+++++++++ 
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~-----~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAA-----DGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            34668999999999999999999999     899998877553211       0 012578899999999998877776 


Q ss_pred             ------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeeccccccccc
Q 016047           93 ------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                            .+|.|+|+|+......      ++....+++|+.|+.++++++...   ..+..+++++||...+.      +.
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------~~  171 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM------GN  171 (267)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH------CC
T ss_pred             HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc------CC
Confidence                  5788999987543221      145677899999999999987421   11245777776533221      10


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhh
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH  229 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~  229 (396)
                                     + ....|+..|.        +...+ ...|+++.+++|+.|..+.....   ......   ... 
T Consensus       172 ---------------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~---~~~-  227 (267)
T 4iiu_A          172 ---------------R-GQVNYSAAKAGIIGATKALAIEL-AKRKITVNCIAPGLIDTGMIEME---ESALKE---AMS-  227 (267)
T ss_dssp             ---------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCSTTCCCC---HHHHHH---HHH-
T ss_pred             ---------------C-CCchhHHHHHHHHHHHHHHHHHH-hhcCeEEEEEEEeeecCCccccc---HHHHHH---HHh-
Confidence                           0 1122664333        22222 34589999999999988422211   111100   111 


Q ss_pred             cCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCC
Q 016047          230 EGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNG  278 (396)
Q Consensus       230 ~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~  278 (396)
                       ..|+.         .   ..+..++|.++++++..+  ...|+++++.+|
T Consensus       228 -~~p~~---------~---~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          228 -MIPMK---------R---MGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             -TCTTC---------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cCCCC---------C---CcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence             22211         1   223455678887777542  345889998765

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.55  E-value=2e-14  Score=130.78  Aligned_cols=156  Identities=12%  Similarity=0.033  Sum_probs=106.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|.....      .....++.++.+|++|+++++++.+      
T Consensus        31 gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYAR-----AGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            58999999999999999999999     899999999764210      0112467899999999988766543      


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +      . 
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~------~------~-  172 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ------G------G-  172 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C------C-
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC------C------C-
Confidence            5788999987543221      145678899999999999987543  11245677776432221      0      0 


Q ss_pred             ccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeec
Q 016047          165 FTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                              + ....|+..|.     .   ...+ ...|+++..++|+.|.++
T Consensus       173 --------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~  214 (273)
T 3uf0_A          173 --------R-NVAAYAASKHAVVGLTRALASEW-AGRGVGVNALAPGYVVTA  214 (273)
T ss_dssp             --------S-SCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCSG
T ss_pred             --------C-CChhHHHHHHHHHHHHHHHHHHH-hhcCcEEEEEEeCCCcCC
Confidence                    1 1123664322     2   2222 346899999999999983

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.55  E-value=2.9e-13  Score=123.42  Aligned_cols=156  Identities=15%  Similarity=0.053  Sum_probs=107.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|++|+++++++++     
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGK-----EGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999975321      0 012467889999999998877776     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--C--CCcceEEEeccceeecccccccccCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--A--PNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~--~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                        .+|.|+|+|+......      ++....+++|+.|+.++++++.+.  -  .+..+++++||...+      ++    
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~------~~----  166 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK------QG----  166 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGT------SC----
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccc------cC----
Confidence              5788999987532211      134667899999999999987654  0  124677777643211      11    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                        .         + ....|+..|.     ...+.  ....|+++.+++|+.|.+
T Consensus       167 --~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  208 (277)
T 2rhc_B          167 --V---------V-HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVET  208 (277)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCS
T ss_pred             --C---------C-CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcC
Confidence              0         1 1122554322     22211  135689999999999988

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.55  E-value=2.4e-14  Score=128.96  Aligned_cols=210  Identities=11%  Similarity=0.023  Sum_probs=127.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|+++++++++       
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVA-----AGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999     8999999999753210    001357889999999998887776       


Q ss_pred             cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|+|+.....      .++....+++|+.|+.++++++.+.  ..+..+++++||...+.      +      . 
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------~-  145 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM------G------L-  145 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C------C-
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc------C------C-
Confidence            688899998754321      1145667899999998655544332  01256788776432221      0      0 


Q ss_pred             ccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceec
Q 016047          165 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  237 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  237 (396)
                              + ....|+..|.     .....  ....|+++.++||+.|+++.       ...+      .......  +.
T Consensus       146 --------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-------~~~~------~~~~~~~--~~  201 (254)
T 1hdc_A          146 --------A-LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-------TAET------GIRQGEG--NY  201 (254)
T ss_dssp             --------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HHHH------TCCCSTT--SC
T ss_pred             --------C-CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc-------cccc------chhHHHH--HH
Confidence                    1 1122654222     22211  13468999999999998831       0000      0000000  00


Q ss_pred             CCccccceeeecc-cHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          238 GTKAAWECYSIAS-DADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       238 g~~~~~~~~~~~~-da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                      . ..   ...... +..++|+.+++++..+  ...|+.+++.++.
T Consensus       202 ~-~~---p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  242 (254)
T 1hdc_A          202 P-NT---PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             T-TS---TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             h-cC---CCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence            0 00   011123 4556688888877543  2458889887764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.55  E-value=8.4e-14  Score=126.18  Aligned_cols=212  Identities=13%  Similarity=0.093  Sum_probs=132.4

Q ss_pred             CCCEEEEEcCCCh--hHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGI--VGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGf--iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      .+|+||||||+|+  ||.+++++|++     +|++|++++|+....        .....++.++.+|++|+++++++++ 
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHE-----AGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHH-----CCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            3589999999999  99999999999     899999999874311        1112368899999999988877665 


Q ss_pred             ------cCCCeeEEEEeccC----C------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccc
Q 016047           93 ------QLTDVTHIFYVTWT----N------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~----~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                            .+|.++|+|+....    .      .+.....+++|+.++.++++++.....+-.+++++||...+.      +
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------~  154 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL------V  154 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS------C
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc------c
Confidence                  46778998875431    1      113456789999999999999987633335677766432110      0


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhh
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK  228 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~  228 (396)
                                     .+ ....|+..|.        +...+ ...|+++..++|+.|..+..............   ...
T Consensus       155 ---------------~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~---~~~  214 (266)
T 3oig_A          155 ---------------MP-NYNVMGVAKASLDASVKYLAADL-GKENIRVNSISAGPIRTLSAKGISDFNSILKD---IEE  214 (266)
T ss_dssp             ---------------CT-TTHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCCCSGGGTTCTTHHHHHHH---HHH
T ss_pred             ---------------CC-CcchhHHHHHHHHHHHHHHHHHH-hhcCcEEEEEecCcccccccccccchHHHHHH---HHh
Confidence                           01 1122654322        22222 35689999999999988432221111111100   111


Q ss_pred             hcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCe
Q 016047          229 HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  280 (396)
Q Consensus       229 ~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~  280 (396)
                        ..|+   +      .   ..+..++|+.+++++..+  ...|+++++.+|-.
T Consensus       215 --~~~~---~------~---~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          215 --RAPL---R------R---TTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             --HSTT---S------S---CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --cCCC---C------C---CCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence              1111   0      1   123445577887777542  34589999987644

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.55  E-value=2.6e-14  Score=128.97  Aligned_cols=212  Identities=14%  Similarity=0.069  Sum_probs=131.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHh------cCCCe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLS------QLTDV   97 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~------~~~~V   97 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+..... ....++.++.+|++|+++++++++      .+|.+
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLD-----AGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHH-----HTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            57999999999999999999999     8999999999643210 012478899999999998887776      67778


Q ss_pred             eEEEEecc----------CCCccHHHHHHhHHHHHHHHHHHHcccC----------CCcceEEEeccceeeccccccccc
Q 016047           98 THIFYVTW----------TNRSTEAENCKINGSMFRNVLRAVIPNA----------PNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        98 ~h~a~~~~----------~~~~~~~~~~~~nv~gt~~ll~a~~~~~----------~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                      +|+|+...          ...++....+++|+.|+.++++++...-          .+-.+++++||...+...      
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  157 (257)
T 3tl3_A           84 VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ------  157 (257)
T ss_dssp             EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH------
T ss_pred             EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC------
Confidence            88876422          1112456788999999999999887541          123467777643322110      


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhh
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKH  229 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~  229 (396)
                                     + ....|+..|.        +...+ ...|+++..++|+.|..+......   .....  ...  
T Consensus       158 ---------------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~--~~~--  213 (257)
T 3tl3_A          158 ---------------I-GQAAYSASKGGVVGMTLPIARDL-ASHRIRVMTIAPGLFDTPLLASLP---EEARA--SLG--  213 (257)
T ss_dssp             ---------------H-HHHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCTTC---C---HHHHH--HHH--
T ss_pred             ---------------C-CCccHHHHHHHHHHHHHHHHHHh-cccCcEEEEEEecCccChhhhhcc---HHHHH--HHH--
Confidence                           0 1112554322        22222 346899999999999883211111   11100  001  


Q ss_pred             cCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeee
Q 016047          230 EGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFK  282 (396)
Q Consensus       230 ~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s  282 (396)
                      ...|  .++      .   ..+..++|..+++++.++...|+++++.+|..++
T Consensus       214 ~~~~--~~~------r---~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          214 KQVP--HPS------R---LGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HTSS--SSC------S---CBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             hcCC--CCC------C---ccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            1112  111      1   2234455788888877666679999998776543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.55  E-value=4.1e-15  Score=134.08  Aligned_cols=111  Identities=10%  Similarity=0.095  Sum_probs=86.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC----CCeeEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL----TDVTHIF  101 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~----~~V~h~a  101 (396)
                      |+||||||+|+||.+++++|++     +|++|++++|+.....   .  . +.+|++|+++++++++.+    |.++|+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~---~--~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~A   70 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEA-----AGHQIVGIDIRDAEVI---A--D-LSTAEGRKQAIADVLAKCSKGMDGLVLCA   70 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSSSSEE---C--C-TTSHHHHHHHHHHHHTTCTTCCSEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCchhhc---c--c-cccCCCCHHHHHHHHHHhCCCCCEEEECC
Confidence            6899999999999999999999     8999999999764321   1  1 679999999999988765    7788887


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceee
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHY  148 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y  148 (396)
                      +... ........+++|+.|+.++++++.+.  ..+..+++++||...|
T Consensus        71 g~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  118 (257)
T 1fjh_A           71 GLGP-QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA  118 (257)
T ss_dssp             CCCT-TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             CCCC-CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence            6432 12357888999999999999988643  2235678888765544

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.55  E-value=2.7e-14  Score=128.71  Aligned_cols=212  Identities=16%  Similarity=0.139  Sum_probs=128.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHh-
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      +..+|+||||||+|+||.+++++|++     +|++|++++++.....        ....++.++.+|++|.++++++++ 
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHK-----DGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHH-----TTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHH
Confidence            34568999999999999999999999     8999999885433210        012468899999999998877776 


Q ss_pred             ------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047           93 ------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                            .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+      .+. 
T Consensus        85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~------~~~-  157 (256)
T 3ezl_A           85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ------KGQ-  157 (256)
T ss_dssp             HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGG------GSC-
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc------cCC-
Confidence                  4577888877543211      145668899999988887776442  1124577777643222      110 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhc
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  230 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  230 (396)
                                    + ....|+..|.     .   ...+ ...|+++.+++|+.|..+......   .....  .+..  
T Consensus       158 --------------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~--~~~~--  214 (256)
T 3ezl_A          158 --------------F-GQTNYSTAKAGIHGFTMSLAQEV-ATKGVTVNTVSPGYIGTDMVKAIR---PDVLE--KIVA--  214 (256)
T ss_dssp             --------------S-CCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCHHHHTSC---HHHHH--HHHH--
T ss_pred             --------------C-CCcccHHHHHHHHHHHHHHHHHH-HHhCCEEEEEEECcccCccccccC---HHHHH--HHHh--
Confidence                          1 1123664333     2   2222 346899999999999873211111   11100  0111  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCe
Q 016047          231 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDV  280 (396)
Q Consensus       231 ~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~  280 (396)
                      ..|+.         .   ..+..++|.++++++..  ....|+++++.+|..
T Consensus       215 ~~~~~---------~---~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          215 TIPVR---------R---LGSPDEIGSIVAWLASEESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             HSTTS---------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             cCCCC---------C---CcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEe
Confidence            11110         1   12344557777777643  234589999987654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.54  E-value=3e-14  Score=127.67  Aligned_cols=208  Identities=17%  Similarity=0.080  Sum_probs=127.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC-CCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR-RPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R-~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++| ++...      . ....++.++.+|++|+++++++++    
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAK-----QGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999     8999999999 43210      0 012467889999999998877776    


Q ss_pred             ---cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.++|+|+.....      .++....+++|+.|+.++++++.+.  ..+..+++++||...+      ++     
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~-----  147 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGV------TG-----  147 (246)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH------HC-----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhc------CC-----
Confidence               678899998753221      1145667899999977777665532  1124678877653322      11     


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                       .         + ....|+..|.        +...+ ...|+++.+++|+.|..+.........  ...   ...  ..|
T Consensus       148 -~---------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~---~~~--~~p  208 (246)
T 2uvd_A          148 -N---------P-GQANYVAAKAGVIGLTKTSAKEL-ASRNITVNAIAPGFIATDMTDVLDENI--KAE---MLK--LIP  208 (246)
T ss_dssp             -C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBGGGCSSCCCTTH--HHH---HHH--TCT
T ss_pred             -C---------C-CCchHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEeccccCcchhhcCHHH--HHH---HHh--cCC
Confidence             0         0 1122554322        22222 356899999999999874221111100  000   011  112


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                      +   +      .   ..+..++|..+++++..+  ...|+++++.+|.
T Consensus       209 ~---~------~---~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          209 A---A------Q---FGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             T---C------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             C---C------C---CcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            1   1      1   234455577777777542  2358888887663

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.54  E-value=2.9e-13  Score=123.59  Aligned_cols=219  Identities=16%  Similarity=0.025  Sum_probs=131.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------------------CCCCCCeeEEEecCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------------------WNADHLVEYVQCDVS   82 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------------~~~~~~v~~~~~Dl~   82 (396)
                      ..+|++|||||+|+||.+++++|++     +|++|++++|+....                    .....++.++.+|++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAA-----EGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            3458999999999999999999999     899999999842110                    001246788999999


Q ss_pred             ChHHHHHHHh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccce
Q 016047           83 DPEETQAKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTK  146 (396)
Q Consensus        83 d~~~~~~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~  146 (396)
                      |+++++++++       .+|.++|+|+......      ++....+++|+.|+.++++++...   ..+-.+++++||..
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA  167 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh
Confidence            9998877765       5788999987543211      144667899999999999987553   11134677666432


Q ss_pred             eecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHH
Q 016047          147 HYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVG  218 (396)
Q Consensus       147 ~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~  218 (396)
                      .+.      +      .         + ....|+..|.        +...+ ...|+++..++|+.|.++  ........
T Consensus       168 ~~~------~------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~t~--~~~~~~~~  222 (280)
T 3pgx_A          168 GLK------A------T---------P-GNGHYSASKHGLTALTNTLAIEL-GEYGIRVNSIHPYSVETP--MIEPEAMM  222 (280)
T ss_dssp             GTS------C------C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCST--TCCHHHHH
T ss_pred             hcc------C------C---------C-CchhHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCcccCc--ccchhhhh
Confidence            211      0      0         1 1123664322        22222 346899999999999983  22111111


Q ss_pred             HHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          219 ALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       219 ~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                      ..  +.. .......+.... ....    ...+..++|.++++++..+.  ..|+++++.+|.
T Consensus       223 ~~--~~~-~~~~~~~~~~~~-~~~~----r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          223 EI--FAR-HPSFVHSFPPMP-VQPN----GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HH--HHH-CGGGGGGSCCBT-TBCS----SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hh--hhc-Cchhhhhhhhcc-cCCC----CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            11  000 000000000111 1111    13345556888888775433  358899987653

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.54  E-value=6.9e-15  Score=132.95  Aligned_cols=206  Identities=14%  Similarity=0.045  Sum_probs=128.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      ++|+||||||+|+||++++++|++     +|++|++++|++....    .....+.++.+|++|+++++++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVA-----EGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999     8999999999753210    001247889999999998888776       


Q ss_pred             cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.|+|+|+.....      .++....+++|+.|+.++++++.+.  ..+..+++++||...|.      +      . 
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------~-  147 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA------G------T-  147 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------C------C-
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC------C------C-
Confidence            788899998754321      1145668899999997666655432  01246777776533221      0      0 


Q ss_pred             ccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceec
Q 016047          165 FTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  237 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  237 (396)
                              + ....|+..|     +.....  ....|++++++||+.|+++...  ..           .....   ..|
T Consensus       148 --------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~-----------~~~~~---~~~  202 (260)
T 1nff_A          148 --------V-ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WV-----------PEDIF---QTA  202 (260)
T ss_dssp             --------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TS-----------CTTCS---CCS
T ss_pred             --------C-CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cc-----------hhhHH---hCc
Confidence                    1 112265422     222221  0346899999999999994211  00           00000   001


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCe
Q 016047          238 GTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDV  280 (396)
Q Consensus       238 g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~  280 (396)
                              .....+..++|..+++++..+.  ..|++|++.++..
T Consensus       203 --------~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          203 --------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             --------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --------cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence                    1112344556788777765422  3488999987643

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.54  E-value=1.1e-13  Score=125.43  Aligned_cols=211  Identities=13%  Similarity=0.038  Sum_probs=128.2

Q ss_pred             CCCEEEEEcCCCh-hHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .+|+||||||+|+ ||.+++++|++     +|++|++++|+....        .....++.++.+|++|+++++++++  
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALL-----EGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHH-----CCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence            3589999999985 99999999999     899999999975321        1112478999999999998877765  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccC
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                           .+|.|+|+|+......      ++....+++|+.|+.++++++...   ..+..+++++||...+.      +  
T Consensus        96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------~--  167 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR------A--  167 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC------C--
T ss_pred             HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC------C--
Confidence                 4688999987543221      134667899999999999988764   11345677666422110      0  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcC
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  231 (396)
                          .         + ....|+..|.     .....  ....|+++..++|+.|..........  ...      .....
T Consensus       168 ----~---------~-~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~------~~~~~  225 (266)
T 3o38_A          168 ----Q---------H-SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--SEL------LDRLA  225 (266)
T ss_dssp             ----C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------------
T ss_pred             ----C---------C-CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--HHH------HHHHH
Confidence                0         1 1223664322     22111  13468999999999998732111000  000      00000


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                      .       ......   ..+..++|..+++++..+  ...|+++++.+|.
T Consensus       226 ~-------~~~~~r---~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          226 S-------DEAFGR---AAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             --------CCTTSS---CCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             h-------cCCcCC---CCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            0       000111   233455588888877542  3458999987763

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.53  E-value=2.9e-14  Score=132.98  Aligned_cols=224  Identities=10%  Similarity=0.019  Sum_probs=139.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC----------CCC------C-CCCCCeeEEEecCCChHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP----------KPN------W-NADHLVEYVQCDVSDPEET   87 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~----------~~~------~-~~~~~v~~~~~Dl~d~~~~   87 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+.          ...      . ....++.++.+|++|++++
T Consensus        27 gk~vlVTGas~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAA-----EGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            57999999999999999999999     899999999862          100      0 0124577899999999988


Q ss_pred             HHHHh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCC--------cceEEEeccce
Q 016047           88 QAKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPN--------LRHVCLQTGTK  146 (396)
Q Consensus        88 ~~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~--------~~~~~~~s~~~  146 (396)
                      .++++       .+|.++|+|+......      ++....+++|+.|+.++++++......        -.+|+++||..
T Consensus       102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~  181 (322)
T 3qlj_A          102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA  181 (322)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHH
Confidence            77766       6788999987543211      145678899999999999987654110        13777776533


Q ss_pred             eecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeecCCCCcchhHH
Q 016047          147 HYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVG  218 (396)
Q Consensus       147 ~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~  218 (396)
                      .+.      +.               + ....|+..|.     .   ...+ ...|+++..++|+ +..........  .
T Consensus       182 ~~~------~~---------------~-~~~~Y~asKaal~~l~~~la~e~-~~~gI~vn~v~PG-~~t~~~~~~~~--~  235 (322)
T 3qlj_A          182 GLQ------GS---------------V-GQGNYSAAKAGIATLTLVGAAEM-GRYGVTVNAIAPS-ARTRMTETVFA--E  235 (322)
T ss_dssp             HHH------CB---------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEEC-TTSCCSCCSCC--C
T ss_pred             Hcc------CC---------------C-CCccHHHHHHHHHHHHHHHHHHh-cccCcEEEEecCC-CCCccchhhhh--h
Confidence            221      10               0 1112654322     2   2222 3468999999998 54421111100  0


Q ss_pred             HHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCCee---------------
Q 016047          219 ALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGDVF---------------  281 (396)
Q Consensus       219 ~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~~~---------------  281 (396)
                      ..          ..+..       .....+..|   +|.++++++....  ..|++|++.+|...               
T Consensus       236 ~~----------~~~~~-------~~~~~~ped---va~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~  295 (322)
T 3qlj_A          236 MM----------ATQDQ-------DFDAMAPEN---VSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGA  295 (322)
T ss_dssp             -------------------------CCTTCGGG---THHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSS
T ss_pred             hh----------hcccc-------ccCCCCHHH---HHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccC
Confidence            00          00000       001122333   4677777764322  35899999887655               


Q ss_pred             --eHHHHHHHHHHHhCCCCC
Q 016047          282 --KWKHLWKVLAEQFGIEDY  299 (396)
Q Consensus       282 --s~~el~~~l~~~~g~~~~  299 (396)
                        ++.|+++.+.+.+|.+.+
T Consensus       296 ~~~~~el~~~~~~~~~~~~~  315 (322)
T 3qlj_A          296 RWDPAELGPVVADLLGKARP  315 (322)
T ss_dssp             CCCGGGHHHHHHHHHHHSCC
T ss_pred             CCCHHHHHHHHHHHhhccCC
Confidence              669999999999886543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.53  E-value=2.9e-14  Score=131.40  Aligned_cols=230  Identities=10%  Similarity=0.016  Sum_probs=138.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCC---CeeEEEecCCChHHHHHHHh--
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADH---LVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~---~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....      .. ...   ++.++.+|++|+++++++++  
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAK-----EGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            58999999999999999999999     899999999975321      00 012   68899999999998877765  


Q ss_pred             -----cCCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeeccccccccc
Q 016047           93 -----QLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                           .+|.|+|+|+......        ++....+++|+.|+.++++++....  .+ .+++++||...+       ..
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~-------~~  172 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAG-------PQ  172 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGS-------SS
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhc-------cC
Confidence                 5788999987533211        1356688999999999999887641  12 577777643222       10


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHHHH-----HHHh--hcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhh
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLEDIL-----FEEV--EKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKH  229 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~~l-----~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~  229 (396)
                           .        .+ ....|+..|..     ....  ....|+++.+++|+.|.++...... ....... .......
T Consensus       173 -----~--------~~-~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~  237 (297)
T 1xhl_A          173 -----A--------HS-GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDK-LYSFIGS  237 (297)
T ss_dssp             -----C--------CT-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHH-HHHHHHH
T ss_pred             -----C--------CC-CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccc-hHHHHHH
Confidence                 0        01 11236643322     2111  1356899999999999883111000 0000000 0000111


Q ss_pred             cCCCceecCCccccceeeecccHHHHHHHHHHHhcCC---CCCCceeeecCCCeeeHHHHHHHHHH
Q 016047          230 EGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP---YAKNEAFNCNNGDVFKWKHLWKVLAE  292 (396)
Q Consensus       230 ~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~---~~~g~~~ni~~~~~~s~~el~~~l~~  292 (396)
                      .....  |-        ....+..++|..+++++..+   ...|+++++.++....+.+....+.+
T Consensus       238 ~~~~~--p~--------~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~  293 (297)
T 1xhl_A          238 RKECI--PV--------GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS  293 (297)
T ss_dssp             CTTTC--TT--------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred             HHhcC--CC--------CCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence            11110  10        11234455678888777543   34588999988766665554444433

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.53  E-value=1.8e-14  Score=131.47  Aligned_cols=216  Identities=16%  Similarity=0.084  Sum_probs=132.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....      .  ....++.++.+|++|+++++++++   
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMR-----HGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0  012468899999999988877665   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.++|+|+......      ++....+++|+.|+.++++++...-  .+..+++++||...+.      +.   
T Consensus       101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~~---  171 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR------GQ---  171 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH------TC---
T ss_pred             HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC------CC---
Confidence                5788999987432211      1456788999999999999875431  1235677766433221      10   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                                  + ....|+..|        .+...+ ...|+++..++|+.|.++............  .....  ...
T Consensus       172 ------------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~--~~~~~--~~~  233 (277)
T 4fc7_A          172 ------------A-LQVHAGSAKAAVDAMTRHLAVEW-GPQNIRVNSLAPGPISGTEGLRRLGGPQAS--LSTKV--TAS  233 (277)
T ss_dssp             ------------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBSSSHHHHHHSCCHHH--HHHHH--HTS
T ss_pred             ------------C-CcHHHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEECCEecchhhhhccCCHHH--HHHHh--ccC
Confidence                        0 112255422        222222 345899999999999883100000000000  00001  112


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeH
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  283 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~  283 (396)
                      |+.            .+.+..++|.++++++...  ...|+++++.+|..+++
T Consensus       234 p~~------------r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          234 PLQ------------RLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             TTS------------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred             CCC------------CCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence            211            1223455578888877542  34589999988765544

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.53  E-value=5.8e-14  Score=126.88  Aligned_cols=215  Identities=15%  Similarity=0.050  Sum_probs=125.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|.++++++++       .
T Consensus         9 ~k~vlITGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   83 (261)
T 3n74_A            9 GKVALITGAGSGFGEGMAKRFAK-----GGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGK   83 (261)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            58999999999999999999999     8999999999753210    012468899999999998877776       5


Q ss_pred             CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC------CCcceEEEeccceeecccccccccCCC
Q 016047           94 LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA------PNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~------~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                      +|.++|+|+......       ++....+++|+.|+.++++++....      .+..+++++||...+       .    
T Consensus        84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~-------~----  152 (261)
T 3n74_A           84 VDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAG-------R----  152 (261)
T ss_dssp             CCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTT-------S----
T ss_pred             CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhc-------C----
Confidence            688999987543211       1345678999999999888776541      113356766532211       1    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchh-HHHHHHHHHHhhhcC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNL-VGALCVYAAVCKHEG  231 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~i~~~~~  231 (396)
                         +       .+ ....|+..|.        +...+ ...++++..++|+.+..+........ ...+      .....
T Consensus       153 ---~-------~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~------~~~~~  214 (261)
T 3n74_A          153 ---P-------RP-NLAWYNATKGWVVSVTKALAIEL-APAKIRVVALNPVAGETPLLTTFMGEDSEEI------RKKFR  214 (261)
T ss_dssp             ---C-------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEEC-----------------------------
T ss_pred             ---C-------CC-CccHHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEecCcccChhhhhhcccCcHHH------HHHHh
Confidence               0       01 1122654222        22222 34689999999999888321111100 0000      00000


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCeeeH
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVFKW  283 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~s~  283 (396)
                             ...   ......+..++|.++++++..+  ...|+++++.+|..++.
T Consensus       215 -------~~~---~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          215 -------DSI---PMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             ---------C---TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             -------hcC---CcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence                   000   1112234455688888777532  34589999988876654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.53  E-value=3.3e-14  Score=128.76  Aligned_cols=156  Identities=13%  Similarity=0.091  Sum_probs=106.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++    
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAE-----QGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 012478899999999998877765    


Q ss_pred             ---cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.++|+|+......       ++....+++|+.|+.++++++.... .+-.+++++||...+.      +     
T Consensus        85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~-----  153 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH------S-----  153 (264)
T ss_dssp             HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC------C-----
T ss_pred             HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc------C-----
Confidence               5678889876432111       1456678999999999999876541 0114677766432221      0     


Q ss_pred             CCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                       .         + ....|+..|        .+...+ ...|+++..++|+.|.+
T Consensus       154 -~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~t  195 (264)
T 3ucx_A          154 -Q---------A-KYGAYKMAKSALLAMSQTLATEL-GEKGIRVNSVLPGYIWG  195 (264)
T ss_dssp             -C---------T-TCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEEEEESSCBS
T ss_pred             -C---------C-ccHHHHHHHHHHHHHHHHHHHHh-CccCeEEEEEecCcccc
Confidence             0         1 111265432        222222 35789999999999988

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.53  E-value=5.4e-14  Score=126.48  Aligned_cols=153  Identities=16%  Similarity=0.139  Sum_probs=107.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc-------CC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ-------LT   95 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~   95 (396)
                      .++|+||||||+|+||.+++++|++     +|++|++++|++...    ..+.++.+|++|+++++++++.       +|
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~----~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD   89 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFAD-----AGDKVAITYRSGEPP----EGFLAVKCDITDTEQVEQAYKEIEETHGPVE   89 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSSCCC----TTSEEEECCTTSHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChHhh----ccceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            3468999999999999999999999     899999999976432    3478999999999988777764       57


Q ss_pred             CeeEEEEeccC------CCccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           96 DVTHIFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        96 ~V~h~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                      .++|+|+....      ..++....+++|+.|+.++++++.+.  ..+..+++++||...+.      +      .    
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~------~------~----  153 (253)
T 2nm0_A           90 VLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL------G------S----  153 (253)
T ss_dssp             EEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC------C------H----
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC------C------C----
Confidence            89998875322      12256778899999999999877653  11246777776432211      0      0    


Q ss_pred             CCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceee
Q 016047          168 DMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       168 ~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                           + ....|+..|.     .   ...+ ...++++.+++|+.|..
T Consensus       154 -----~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~T  194 (253)
T 2nm0_A          154 -----A-GQANYAASKAGLVGFARSLAREL-GSRNITFNVVAPGFVDT  194 (253)
T ss_dssp             -----H-HHHHHHHHHHHHHHHHHHHHHHH-CSSSEEEEEEEECSBCC
T ss_pred             -----C-CcHHHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEeCcCcC
Confidence                 0 0112554322     2   2222 45689999999998876

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.53  E-value=1.9e-13  Score=124.13  Aligned_cols=209  Identities=13%  Similarity=0.071  Sum_probs=131.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|+++++++++   
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLAL-----EGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999997764211       0 012467899999999998877776   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                          .+|.++|+|+......      ++....+++|+.|+.++++++.+.-.+-.+++++||..      ..++      
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~------~~~~------  172 (271)
T 3v2g_A          105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL------AELV------  172 (271)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG------GTCC------
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh------hccC------
Confidence                6788999987543211      14567789999999999998887633345677665321      0111      


Q ss_pred             CCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047          163 PPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  234 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  234 (396)
                       +       .+ ....|+..|.        +...+ ...|+++..++|+.|..+...........+      ..  ..|+
T Consensus       173 -~-------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~------~~--~~~~  234 (271)
T 3v2g_A          173 -P-------WP-GISLYSASKAALAGLTKGLARDL-GPRGITVNIVHPGSTDTDMNPADGDHAEAQ------RE--RIAT  234 (271)
T ss_dssp             -C-------ST-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCSSSSCSSCSSHHHH------HH--TCTT
T ss_pred             -C-------CC-CchHHHHHHHHHHHHHHHHHHHh-hhhCeEEEEEecCCCcCCcccccchhHHHH------Hh--cCCC
Confidence             0       01 1223664332        22222 345899999999999884322111111111      11  1121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                         +      .   ..+..++|..+++++...  ...|+++++.+|.
T Consensus       235 ---~------r---~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          235 ---G------S---YGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             ---S------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             ---C------C---CCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence               1      1   123445577777777532  3458889887653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.53  E-value=4.8e-14  Score=128.19  Aligned_cols=210  Identities=14%  Similarity=0.016  Sum_probs=129.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|++++.++++   
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  102 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLAS-----MGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV  102 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999964321       0 012478899999999998877765   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +    
T Consensus       103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~----  172 (271)
T 4iin_A          103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER------G----  172 (271)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------C----
T ss_pred             HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC------C----
Confidence                5788999987543221      145677899999999988877653  11245777776432221      1    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                        .         + ....|+..|.     ...+.  ....++++..++|+.|..+.....   ....      ...... 
T Consensus       173 --~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~------~~~~~~-  230 (271)
T 4iin_A          173 --N---------M-GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL---KDEL------KADYVK-  230 (271)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------------CGG-
T ss_pred             --C---------C-CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh---cHHH------HHHHHh-
Confidence              0         0 1122664332     22211  135689999999999887311110   0000      000000 


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                            ..   ......+..++|+++++++..+  ...|+++++.+|-
T Consensus       231 ------~~---~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          231 ------NI---PLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             ------GC---TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             ------cC---CcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence                  00   1112334555688888877543  3458999987764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.53  E-value=2.2e-14  Score=130.37  Aligned_cols=121  Identities=17%  Similarity=0.036  Sum_probs=90.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|+||||||+|+||++++++|++.    .|++|++++|+....      .. ...++.++.+|++|.++++++++    
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~----~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRL----FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHH----SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHh----cCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            3479999999999999999999862    388999999975321      00 12467899999999998887776    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceee
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHY  148 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y  148 (396)
                         .+|.|+|+|+......      .+....+++|+.|+.++++++.+...+..+++++||...|
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~  143 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV  143 (276)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred             hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhh
Confidence               6788999987543211      2345678999999999999998762223478887765444

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.53  E-value=3.8e-14  Score=129.22  Aligned_cols=155  Identities=12%  Similarity=0.019  Sum_probs=107.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|+++++++++       .
T Consensus        29 gk~vlVTGas~gIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLAD-----EGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999     8999999999753210    002467899999999988877665       5


Q ss_pred             CCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.++|+|+.....    .  ++....+++|+.|+.++++++...  ..+-.+++++||...+.      +         
T Consensus       104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~------~---------  168 (277)
T 3gvc_A          104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV------A---------  168 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS------C---------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc------C---------
Confidence            78899998754321    1  145678899999999999987653  12245677666422110      0         


Q ss_pred             cCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceee
Q 016047          166 TEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                            .+ ....|+..|.     .   .... ...|+++.+++|+.|.+
T Consensus       169 ------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t  210 (277)
T 3gvc_A          169 ------VG-GTGAYGMSKAGIIQLSRITAAEL-RSSGIRSNTLLPAFVDT  210 (277)
T ss_dssp             ------CT-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ------CC-CchhHHHHHHHHHHHHHHHHHHh-cccCeEEEEEeeCCccC
Confidence                  01 1123664332     2   2222 34689999999999988

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.53  E-value=3.7e-14  Score=128.62  Aligned_cols=212  Identities=14%  Similarity=0.095  Sum_probs=130.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....      ..  ...++.++.+|++|+++++++++   
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   93 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAA-----AGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA   93 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      00  12468899999999988776665   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                          .+|.++|+|+......      ++....+++|+.|+.++++++.+..   ..-.+++++||...+       ..  
T Consensus        94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-------~~--  164 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL-------AP--  164 (266)
T ss_dssp             HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-------SC--
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc-------cC--
Confidence                6788999988543221      1356678999999999999886541   113467766643222       10  


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcC
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  231 (396)
                                  .+ ....|+..|.        +...+ ...|+++..++|+.|..+............   ..+..  .
T Consensus       165 ------------~~-~~~~Y~asK~a~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~---~~~~~--~  225 (266)
T 4egf_A          165 ------------LP-DHYAYCTSKAGLVMATKVLAREL-GPHGIRANSVCPTVVLTEMGQRVWGDEAKS---APMIA--R  225 (266)
T ss_dssp             ------------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCBCSHHHHHHTCSHHHH---HHHHT--T
T ss_pred             ------------CC-CChHHHHHHHHHHHHHHHHHHHH-hhhCeEEEEEEeCCCcCchhhhhccChHHH---HHHHh--c
Confidence                        01 1122664322        22222 346899999999999873110000000000   00011  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCe
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  280 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~  280 (396)
                      .|+            ....+..++|.++++++...  ...|+++++.+|..
T Consensus       226 ~p~------------~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          226 IPL------------GRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             CTT------------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCC------------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCcc
Confidence            121            11223455688888877542  34589999987643

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.53  E-value=3.4e-13  Score=123.49  Aligned_cols=211  Identities=14%  Similarity=0.052  Sum_probs=129.9

Q ss_pred             CCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+  |+||.+++++|++     +|++|++++|+....     .. ...++.++.+|++|+++++++++    
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHR-----EGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            4799999999  9999999999999     899999999976310     00 01246789999999998877765    


Q ss_pred             ---cCCCeeEEEEeccC--------CC--ccHHHHHHhHHHHHHHHHHHHcccCC-CcceEEEeccceeecccccccccC
Q 016047           93 ---QLTDVTHIFYVTWT--------NR--STEAENCKINGSMFRNVLRAVIPNAP-NLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~--------~~--~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                         .+|.++|+|+....        ..  ++....+++|+.|+.++++++..... +-.+++++||...+       .. 
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~-------~~-  167 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAE-------KV-  167 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGT-------SB-
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhc-------cC-
Confidence               56889999875421        11  14566889999999999999887521 23577777643211       10 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcC
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  231 (396)
                          .         + ....|+..|.     ...+.  ....|+++.+++|+.|.++........ ..+..  .+..  .
T Consensus       168 ----~---------~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~--~~~~--~  228 (285)
T 2p91_A          168 ----V---------P-HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGF-HLLME--HTTK--V  228 (285)
T ss_dssp             ----C---------T-TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTH-HHHHH--HHHH--H
T ss_pred             ----C---------C-CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccch-HHHHH--HHHh--c
Confidence                0         1 0112554222     22211  135689999999999999432111111 11100  0111  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                      .|+.         .   ..+..++|..+++++...  ...|++|++.++.
T Consensus       229 ~p~~---------~---~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          229 NPFG---------K---PITIEDVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             STTS---------S---CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             CCCC---------C---CcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            1211         1   123455678888877532  2347889887763

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.53  E-value=3.2e-14  Score=127.67  Aligned_cols=209  Identities=18%  Similarity=0.151  Sum_probs=130.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+.....    ........+.+|++|+++++++++       
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAE-----RGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            358999999999999999999999     8999999999753210    001356789999999998877776       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +.       
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------~~-------  149 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM------GN-------  149 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------CC-------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC------CC-------
Confidence            6788999987543211      145668899999999999987653  11245677776432221      10       


Q ss_pred             ccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCcee
Q 016047          165 FTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRF  236 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  236 (396)
                              + ....|+..|.        +...+ ...|+++..++|+.|..+.......  .....   ..  ...|.  
T Consensus       150 --------~-~~~~Y~asK~a~~~l~~~la~e~-~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~---~~--~~~p~--  210 (248)
T 3op4_A          150 --------A-GQANYAAAKAGVIGFTKSMAREV-ASRGVTVNTVAPGFIETDMTKALND--EQRTA---TL--AQVPA--  210 (248)
T ss_dssp             --------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBSSTTTTTSCH--HHHHH---HH--HTCTT--
T ss_pred             --------C-CChHHHHHHHHHHHHHHHHHHHH-HHhCeEEEEEeeCCCCCchhhhcCH--HHHHH---HH--hcCCC--
Confidence                    1 1122664332        22222 3568999999999998732211111  11100   01  12221  


Q ss_pred             cCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          237 PGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       237 ~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                       +      .   ..+..++|.++++++....  ..|+++++.+|.
T Consensus       211 -~------r---~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          211 -G------R---LGDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             -C------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             -C------C---CcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence             1      1   2234455777777775432  348999997764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.53  E-value=2.1e-14  Score=130.23  Aligned_cols=208  Identities=16%  Similarity=0.113  Sum_probs=126.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|+||||||+|+||++++++|++     +|++|++++|+.....    ....++.++.+|++|+++++++++       .
T Consensus        27 gk~vlVTGas~gIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (266)
T 3grp_A           27 GRKALVTGATGGIGEAIARCFHA-----QGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEG  101 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999     8999999999753210    012468899999999998877665       6


Q ss_pred             CCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.++|+|+.....    .  ++....+++|+.|+.++.+++...  ..+..+++++||...+.      +.        
T Consensus       102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~------~~--------  167 (266)
T 3grp_A          102 IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV------GN--------  167 (266)
T ss_dssp             CCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC--------------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC------CC--------
Confidence            78899998754321    1  145667899999977776665432  11245777776432221      10        


Q ss_pred             cCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceec
Q 016047          166 TEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFP  237 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  237 (396)
                             + ....|+..|.        +...+ ...|+++.+++|+.|.++......   ....  ..+.  ...|+.  
T Consensus       168 -------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gI~vn~v~PG~v~t~~~~~~~---~~~~--~~~~--~~~p~~--  229 (266)
T 3grp_A          168 -------P-GQTNYCAAKAGLIGFSKALAQEI-ASRNITVNCIAPGFIKSAMTDKLN---EKQK--EAIM--AMIPMK--  229 (266)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCSHHHHTCC---HHHH--HHHH--TTCTTC--
T ss_pred             -------C-CchhHHHHHHHHHHHHHHHHHHh-hhhCcEEEEEeeCcCCCchhhccC---HHHH--HHHH--hcCCCC--
Confidence                   0 1122654332        22222 345899999999999883111110   0010  0001  122211  


Q ss_pred             CCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          238 GTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       238 g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                             .   .....++|.++++++..+.  ..|+++++.+|.
T Consensus       230 -------r---~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          230 -------R---MGIGEEIAFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             -------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -------C---CcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence                   1   2234555788887775432  358999997764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.53  E-value=2.1e-14  Score=130.49  Aligned_cols=210  Identities=18%  Similarity=0.122  Sum_probs=130.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++     
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELAR-----RGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999     899999999975321      0 012367889999999998877766     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+-.+++++||...+.      +      
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------~------  170 (270)
T 3ftp_A          103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA------G------  170 (270)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------C------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC------C------
Confidence              5788999987533211      145667899999999999987643  11235677776432221      1      


Q ss_pred             CCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCc
Q 016047          163 PPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPL  234 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~  234 (396)
                      .         + ....|+..|.        +...+ ...|+++.+++|+.|..+.....   ....  .....  ...|+
T Consensus       171 ~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~---~~~~--~~~~~--~~~p~  232 (270)
T 3ftp_A          171 N---------P-GQVNYAAAKAGVAGMTRALAREI-GSRGITVNCVAPGFIDTDMTKGL---PQEQ--QTALK--TQIPL  232 (270)
T ss_dssp             C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCSHHHHHS---CHHH--HHHHH--TTCTT
T ss_pred             C---------C-CchhHHHHHHHHHHHHHHHHHHH-hhhCeEEEEEEeCCCcCcchhhc---CHHH--HHHHH--hcCCC
Confidence            0         0 1122664333        22222 34689999999999887310000   0000  00001  11121


Q ss_pred             eecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCee
Q 016047          235 RFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDVF  281 (396)
Q Consensus       235 ~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~~  281 (396)
                                  ....+..++|.++++++..+  ...|+++++.+|..+
T Consensus       233 ------------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          233 ------------GRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             ------------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             ------------CCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence                        11233455578877777432  345899999877543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.52  E-value=9.5e-14  Score=126.86  Aligned_cols=211  Identities=11%  Similarity=0.035  Sum_probs=130.9

Q ss_pred             CCEEEEEcCCCh--hHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGI--VGNSLAEILPLPDTPGGPWKVYGVARRPKPN----W-NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGf--iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~-~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      +|+||||||+|+  ||.+++++|++     +|++|++++|+....    . ....++.++.+|++|+++++++++.    
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHR-----EGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHH-----TTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHH-----cCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999988  99999999999     899999999986110    0 0123578999999999988777654    


Q ss_pred             ---CCCeeEEEEeccC-----------CCccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccC
Q 016047           94 ---LTDVTHIFYVTWT-----------NRSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        94 ---~~~V~h~a~~~~~-----------~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                         +|.++|+|+....           ..++....+++|+.++.++++++... ..+..+++++||...+       .  
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~-------~--  171 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAE-------K--  171 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGT-------S--
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccc-------c--
Confidence               5778898875432           11144567899999999999988765 2224567766642211       1  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhc
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE  230 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~  230 (396)
                           +       .+ ....|+..|.        +...+ ...|+++.+++|+.|..+..............   ...  
T Consensus       172 -----~-------~~-~~~~Y~asKaal~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~---~~~--  232 (280)
T 3nrc_A          172 -----A-------MP-SYNTMGVAKASLEATVRYTALAL-GEDGIKVNAVSAGPIKTLAASGISNFKKMLDY---NAM--  232 (280)
T ss_dssp             -----C-------CT-TTHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCCCCSGGGGCTTHHHHHHH---HHH--
T ss_pred             -----C-------CC-CchhhHHHHHHHHHHHHHHHHHH-HHcCcEEEEEeeccccchhhhcCcchHHHHHH---HHh--
Confidence                 0       01 1122654322        22222 34689999999999988421111111111100   011  


Q ss_pred             CCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCe
Q 016047          231 GIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  280 (396)
Q Consensus       231 ~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~  280 (396)
                      ..|+.            ...+..++|+++++++...  ...|+++++.+|..
T Consensus       233 ~~p~~------------~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          233 VSPLK------------KNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             HSTTC------------SCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCC------------CCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence            11111            1223455688888877542  34589999987654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.52  E-value=8.4e-14  Score=126.00  Aligned_cols=209  Identities=17%  Similarity=0.133  Sum_probs=130.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhc------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ------   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~------   93 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....    .....++.++.+|++|+++++++++.      
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAR-----EGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999     899999999975321    00014678999999999988777664      


Q ss_pred             -CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           94 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        94 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                       +|.++|+|+......      ++....+++|+.|+.++++++.....+..+++++||...|       +.         
T Consensus        80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-------~~---------  143 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-------GA---------  143 (263)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-------CH---------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-------CC---------
Confidence             578888877532211      1345678999999999999887653223577777653322       10         


Q ss_pred             CCCCCCCCCCcchhH-----H---HHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecC
Q 016047          167 EDMPRLDAPNFYYTL-----E---DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPG  238 (396)
Q Consensus       167 E~~p~~~~~~~~y~~-----e---~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g  238 (396)
                            + ....|+.     +   +.+.... ...|+++.+++|+.|.++......   ....  ..+..  ..|+   +
T Consensus       144 ------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~~---~~~~--~~~~~--~~p~---~  205 (263)
T 2a4k_A          144 ------F-GLAHYAAGKLGVVGLARTLALEL-ARKGVRVNVLLPGLIQTPMTAGLP---PWAW--EQEVG--ASPL---G  205 (263)
T ss_dssp             ------H-HHHHHHHCSSHHHHHHHHHHHHH-TTTTCEEEEEEECSBCCGGGTTSC---HHHH--HHHHH--TSTT---C
T ss_pred             ------C-CcHHHHHHHHHHHHHHHHHHHHh-hhhCcEEEEEEeCcCcCchhhhcC---HHHH--HHHHh--cCCC---C
Confidence                  0 0111332     2   2222222 456899999999999984321111   1110  00111  1121   1


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCe
Q 016047          239 TKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  280 (396)
Q Consensus       239 ~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~  280 (396)
                            .   ..+..++|..+++++..+  ...|+.+++.++..
T Consensus       206 ------~---~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          206 ------R---AGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  240 (263)
T ss_dssp             ------S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             ------C---CcCHHHHHHHHHHHhCccccCCcCCEEEECCCcc
Confidence                  1   223455577877777543  24588888877643

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.52  E-value=1.6e-14  Score=131.30  Aligned_cols=158  Identities=11%  Similarity=0.048  Sum_probs=107.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|++...  . ....++.++.+|++|+++++++++       .
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVN-----SGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGR   82 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            358999999999999999999999     899999999975321  0 011357899999999998877765       5


Q ss_pred             CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.++|+|+......       ++....+++|+.|+.++++++... ..+..+++++||...+      ++.        
T Consensus        83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~------~~~--------  148 (270)
T 1yde_A           83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA------IGQ--------  148 (270)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHH------HCC--------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCcccc------CCC--------
Confidence            788999987532211       134667899999999999988653 0113567776643211      110        


Q ss_pred             cCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeec
Q 016047          166 TEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                             + ....|+..|.     .....  ....|+++.++||+.|+++
T Consensus       149 -------~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~  190 (270)
T 1yde_A          149 -------A-QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP  190 (270)
T ss_dssp             -------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred             -------C-CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccc
Confidence                   0 0112554222     22211  1346899999999999983

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.52  E-value=1.4e-13  Score=123.29  Aligned_cols=207  Identities=17%  Similarity=0.147  Sum_probs=129.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhc-------CC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQ-------LT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~~   95 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....  .....++.++.+|++|+++++++++.       +|
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   79 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAK-----EGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLD   79 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            57999999999999999999999     899999999975321  00001378899999999988777654       78


Q ss_pred             CeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           96 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        96 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                      .++|+|+......      ++....+++|+.|+.++++++.+.  ..+..+++++||.. +      ++.          
T Consensus        80 ~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~------~~~----------  142 (245)
T 1uls_A           80 GVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-Y------LGN----------  142 (245)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-G------GCC----------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-h------cCC----------
Confidence            8999987532211      134667899999999998887654  22356788776433 1      110          


Q ss_pred             CCCCCCCCCcchhHH--------HHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCC
Q 016047          168 DMPRLDAPNFYYTLE--------DILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGT  239 (396)
Q Consensus       168 ~~p~~~~~~~~y~~e--------~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~  239 (396)
                           + ....|+..        +.+...+ ...|+++.+++|+.|..+..... .  ....  .....  ..|+   + 
T Consensus       143 -----~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~-~--~~~~--~~~~~--~~p~---~-  204 (245)
T 1uls_A          143 -----L-GQANYAASMAGVVGLTRTLALEL-GRWGIRVNTLAPGFIETRMTAKV-P--EKVR--EKAIA--ATPL---G-  204 (245)
T ss_dssp             -----T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCTTTSSS-C--HHHH--HHHHH--TCTT---C-
T ss_pred             -----C-CchhHHHHHHHHHHHHHHHHHHH-hHhCeEEEEEEeCcCcCcchhhc-C--HHHH--HHHHh--hCCC---C-
Confidence                 0 11225532        2222222 35689999999999987321111 1  1110  00111  1121   1 


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          240 KAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       240 ~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                           .   ..+..++|..+++++..+  ...|+.+++.++.
T Consensus       205 -----~---~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  238 (245)
T 1uls_A          205 -----R---AGKPLEVAYAALFLLSDESSFITGQVLFVDGGR  238 (245)
T ss_dssp             -----S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             -----C---CcCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence                 1   223445577777777543  2358888887654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.52  E-value=9.9e-15  Score=132.71  Aligned_cols=156  Identities=13%  Similarity=0.098  Sum_probs=107.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++     
T Consensus        26 gk~~lVTGas~gIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           26 GRTALVTGSSRGLGRAMAEGLAV-----AGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHH-----TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999     899999999875321      0 012468899999999998887776     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.++|+|+......      ++....+++|+.|+.++++++.+.-  .+..+++++||...+      .+.     
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~------~~~-----  169 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSE------LAR-----  169 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT------SBC-----
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC------CCC-----
Confidence              5788999987543221      1456678999999999988776541  123567776642211      110     


Q ss_pred             CCccCCCCCCCCCCcchhHHH-----HH---HHHhhcCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTLED-----IL---FEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~-----~l---~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                                + ....|+..|     +.   ...+ ...|+++..++|+.|..+
T Consensus       170 ----------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~  211 (271)
T 4ibo_A          170 ----------A-TVAPYTVAKGGIKMLTRAMAAEW-AQYGIQANAIGPGYMLTD  211 (271)
T ss_dssp             ----------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCSG
T ss_pred             ----------C-CchhHHHHHHHHHHHHHHHHHHH-hhhCeEEEEEEeccEeCc
Confidence                      0 112266432     22   2222 346899999999999883

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.52  E-value=1.6e-13  Score=125.18  Aligned_cols=113  Identities=18%  Similarity=0.169  Sum_probs=85.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-------CCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-------ADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+......       ...++.++.+|++|++++.++++.    
T Consensus        34 ~k~vlITGasggIG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQ-----AGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHH-----HTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999     89999999997643100       023678999999999988877765    


Q ss_pred             ---CCCeeEEEEeccC---CC-c----cHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEecc
Q 016047           94 ---LTDVTHIFYVTWT---NR-S----TEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        94 ---~~~V~h~a~~~~~---~~-~----~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                         +|.|+|+|+....   .. .    +....+++|+.|    ++++++.+++.+  ..+++++||
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--~~~iv~isS  172 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG--KGSLIITSS  172 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CCEEEEECC
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CCeEEEECc
Confidence               7889998875322   01 1    345678999999    566777666543  567777764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.52  E-value=2.7e-13  Score=124.04  Aligned_cols=220  Identities=15%  Similarity=0.046  Sum_probs=131.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....       .....++.++.+|++|+++++++++    
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAA-----DGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999     899999999975321       1112468899999999988877665    


Q ss_pred             ---cCCCeeEEEEeccC--C--C---ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVTWT--N--R---STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~--~--~---~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.++|+|+....  .  .   ++....+++|+.|+.++++++...  ..+..+++++||...+       ..   
T Consensus       102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~-------~~---  171 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGT-------RT---  171 (283)
T ss_dssp             HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT-------TB---
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhc-------cC---
Confidence               57889999885322  1  1   145677899999999999988432  1124567777643211       00   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP  233 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~  233 (396)
                        .+       .+ ....|+..|.     .....  ....|+++..++|+.|..+............         ...+
T Consensus       172 --~~-------~~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~---------~~~~  232 (283)
T 3v8b_A          172 --FT-------TP-GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEE---------TAIP  232 (283)
T ss_dssp             --CC-------ST-TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHH---------HSCC
T ss_pred             --CC-------CC-CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchh---------hhhh
Confidence              00       01 1223664322     22221  1356899999999999874221111000000         0111


Q ss_pred             ceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCC
Q 016047          234 LRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNG  278 (396)
Q Consensus       234 ~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~  278 (396)
                      .......... ......+..++|.++++++....  ..|+++++.+|
T Consensus       233 ~~~~~~~~p~-~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          233 VEWPKGQVPI-TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             CBCTTCSCGG-GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhhhhcCcc-ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence            1111110000 00122344566888888775432  34888888765

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.52  E-value=4.6e-14  Score=126.90  Aligned_cols=159  Identities=11%  Similarity=-0.029  Sum_probs=105.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--C--CCCCe-eEEEecCCChHHHHHHHh------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N--ADHLV-EYVQCDVSDPEETQAKLS------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~~~~v-~~~~~Dl~d~~~~~~~~~------~   93 (396)
                      +|+||||||+|+||++++++|++     +|++|++++|++....  .  ...++ .++.+|++|+++++++++      .
T Consensus        11 ~k~vlITGasggiG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAA-----SGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAP   85 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCC
Confidence            57999999999999999999999     8999999999753210  0  01245 789999999998877763      5


Q ss_pred             CCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.|+|+|+.....  .    ......+++|+.|+.++++++.+.  ..+..+++++||...+       ..     .  
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-------~~-----~--  151 (254)
T 2wsb_A           86 VSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGT-------IV-----N--  151 (254)
T ss_dssp             CCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------SC-----C--
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhc-------cC-----C--
Confidence            78899998753321  1    134567899999987777766432  1125678877653222       10     0  


Q ss_pred             cCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          166 TEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                          |..+  ...|+..|     +...+.  ....+++++++||+.++++
T Consensus       152 ----~~~~--~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~  195 (254)
T 2wsb_A          152 ----RPQF--ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATE  195 (254)
T ss_dssp             ----SSSC--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSH
T ss_pred             ----CCCc--chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCch
Confidence                1011  12365433     222221  0235899999999999993

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.52  E-value=3.6e-14  Score=128.62  Aligned_cols=160  Identities=9%  Similarity=0.024  Sum_probs=108.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC---cEEEEEeCCCCCCCC------CCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .+|+||||||+|+||++++++|++     .|   ++|++++|+......      ...++.++.+|++|+++++++++  
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~-----~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLN-----LPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHT-----SSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHh-----cCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence            457999999999999999999999     78   999999998653200      02478899999999988877776  


Q ss_pred             -------cCCCeeEEEEecc-CC------CccHHHHHHhHHHHHHHHHHHHcccCC--------C-----cceEEEeccc
Q 016047           93 -------QLTDVTHIFYVTW-TN------RSTEAENCKINGSMFRNVLRAVIPNAP--------N-----LRHVCLQTGT  145 (396)
Q Consensus        93 -------~~~~V~h~a~~~~-~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~--------~-----~~~~~~~s~~  145 (396)
                             .+|.|+|+|+... ..      ..+....+++|+.++.++++++.....        +     ..+++++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence                   6888999987543 11      114456789999999999998865410        1     3567777653


Q ss_pred             eeecccccccccCCCCCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceee
Q 016047          146 KHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       146 ~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                      ..+..            .+     + .+ +...|+..|     +...+.  ....+++++++||+.|..
T Consensus       175 ~~~~~------------~~-----~-~~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  224 (267)
T 1sny_A          175 LGSIQ------------GN-----T-DG-GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKT  224 (267)
T ss_dssp             GGCST------------TC-----C-SC-CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCS
T ss_pred             ccccc------------CC-----C-CC-CchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceec
Confidence            32211            00     0 00 122366432     222221  123689999999998876

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.51  E-value=4.6e-14  Score=125.60  Aligned_cols=153  Identities=10%  Similarity=-0.005  Sum_probs=105.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh---------cCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---------QLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---------~~~   95 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|++....   ....++.+|++|++++.++++         .+|
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id   74 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKK-----NGYTVLNIDLSANDQA---DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   74 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHH-----TTEEEEEEESSCCTTS---SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEecCccccc---cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            47899999999999999999999     8999999999865421   345678899999988877665         567


Q ss_pred             CeeEEEEeccC----CC---ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           96 DVTHIFYVTWT----NR---STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        96 ~V~h~a~~~~~----~~---~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      .|+|+|+....    ..   ++....+++|+.|+.++++++.+.-.+-.+++++||...+.      +            
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------~------------  136 (236)
T 1ooe_A           75 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG------P------------  136 (236)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS------C------------
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc------C------------
Confidence            78888874321    11   13466789999999999998876421124667666432210      0            


Q ss_pred             CCCCCCCCcchhHH-----HHHHHHhh--c--CCCeeEEEEcCCceee
Q 016047          169 MPRLDAPNFYYTLE-----DILFEEVE--K--KEELSWSVHRPDTIFG  207 (396)
Q Consensus       169 ~p~~~~~~~~y~~e-----~~l~~~~~--~--~~~~~~~ilRp~~v~G  207 (396)
                         .+ ....|+..     .+...+..  .  ..|+++.+++|+.|.+
T Consensus       137 ---~~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t  180 (236)
T 1ooe_A          137 ---TP-SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT  180 (236)
T ss_dssp             ---CT-TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC
T ss_pred             ---CC-CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccC
Confidence               01 12236643     33333321  2  4569999999999887

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.51  E-value=3.2e-14  Score=127.47  Aligned_cols=159  Identities=10%  Similarity=0.019  Sum_probs=107.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHh---cCCCee
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS---QLTDVT   98 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~---~~~~V~   98 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|++...  .....++.++.+|++|+++++++++   .+|.|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAR-----EGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            358999999999999999999999     899999999975321  1111367899999999998876654   567788


Q ss_pred             EEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           99 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        99 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      |+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+       ..     .       
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~-------  140 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS-------VK-----G-------  140 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT-------TB-----C-------
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhC-------cC-----C-------
Confidence            9887533211      134567899999999999987643  1124677777643211       10     0       


Q ss_pred             CCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          171 RLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       171 ~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                        +.....|+..|     +.....  ....|+++.++||+.|+++
T Consensus       141 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  183 (246)
T 2ag5_A          141 --VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP  183 (246)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCc
Confidence              10122365432     222221  0345899999999999993

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.51  E-value=6.8e-14  Score=124.93  Aligned_cols=154  Identities=9%  Similarity=-0.062  Sum_probs=105.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh---------cC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS---------QL   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---------~~   94 (396)
                      ++|+||||||+|+||.+++++|++     +|++|++++|++....   ....++.+|++|+++++++++         .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRA-----RNWWVASIDVVENEEA---SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESSCCTTS---SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-----CCCEEEEEeCChhhcc---CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            457999999999999999999999     8999999999865421   245678999999988877665         56


Q ss_pred             CCeeEEEEeccC----CC---ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           95 TDVTHIFYVTWT----NR---STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        95 ~~V~h~a~~~~~----~~---~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                      |.++|+|+....    ..   ++....+++|+.++.++++++.+.-.+-.+++++||...+       ..     .    
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~----  141 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL-------DG-----T----  141 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG-------SC-----C----
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHc-------cC-----C----
Confidence            778888874321    11   1345678999999999999887642112467766643222       10     0    


Q ss_pred             CCCCCCCCCcchhHHHH-----HHHHhh--c--CCCeeEEEEcCCceee
Q 016047          168 DMPRLDAPNFYYTLEDI-----LFEEVE--K--KEELSWSVHRPDTIFG  207 (396)
Q Consensus       168 ~~p~~~~~~~~y~~e~~-----l~~~~~--~--~~~~~~~ilRp~~v~G  207 (396)
                           + ....|+..|.     ......  .  ..|+++.+++|+.|-.
T Consensus       142 -----~-~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T  184 (241)
T 1dhr_A          142 -----P-GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT  184 (241)
T ss_dssp             -----T-TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred             -----C-CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccC
Confidence                 1 1123664333     333221  2  4579999999998766

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.51  E-value=8.5e-13  Score=120.88  Aligned_cols=156  Identities=14%  Similarity=0.045  Sum_probs=107.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------------------CCCCCCeeEEEecC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------------------WNADHLVEYVQCDV   81 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------------------~~~~~~v~~~~~Dl   81 (396)
                      +|++|||||+|.||.+++++|++     +|++|++++|+....                       .....++.++.+|+
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   85 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQ-----EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV   85 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH-----CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence            58999999999999999999999     899999999873210                       00124678999999


Q ss_pred             CChHHHHHHHh-------cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEecc
Q 016047           82 SDPEETQAKLS-------QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTG  144 (396)
Q Consensus        82 ~d~~~~~~~~~-------~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~  144 (396)
                      +|+++++++++       .+|.++|+|+......       ++....+++|+.|+.++++++....   .+-.+++++||
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            99998877765       5788999988543221       1456688999999999999886541   11346777664


Q ss_pred             ceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeec
Q 016047          145 TKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       145 ~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      ...+.      +      .         + ....|+..|.        +...+ ...|+++..++|+.|..+
T Consensus       166 ~~~~~------~------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gI~vn~v~PG~v~T~  214 (286)
T 3uve_A          166 VGGLK------A------Y---------P-HTGHYVAAKHGVVGLMRAFGVEL-GQHMIRVNSVHPTHVKTP  214 (286)
T ss_dssp             GGGTS------C------C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBSST
T ss_pred             hhhcc------C------C---------C-CccHHHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCcccCC
Confidence            32221      0      0         1 1122654322        22222 346899999999999883

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.51  E-value=6.9e-14  Score=127.24  Aligned_cols=159  Identities=12%  Similarity=0.022  Sum_probs=107.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      ..++|+||||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|++|++++.++++  
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~  102 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAK-----LKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKV  102 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHH
Confidence            33468999999999999999999999     899999999975321      0 012468899999999998877765  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                           .+|.|+|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...|...        
T Consensus       103 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  174 (272)
T 1yb1_A          103 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV--------  174 (272)
T ss_dssp             HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH--------
T ss_pred             HHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC--------
Confidence                 5788999987543221      134567899999988877776543  1235678877754322110        


Q ss_pred             CCCCCccCCCCCCCCCCcchhHH-----HHHHHHhh--c---CCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLE-----DILFEEVE--K---KEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e-----~~l~~~~~--~---~~~~~~~ilRp~~v~G  207 (396)
                                   + ....|+..     .+...+..  .   ..|++++++||+.|.+
T Consensus       175 -------------~-~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t  218 (272)
T 1yb1_A          175 -------------P-FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNT  218 (272)
T ss_dssp             -------------H-HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHH
T ss_pred             -------------C-CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccC
Confidence                         0 01125542     22222221  1   4589999999999887

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.51  E-value=4.4e-14  Score=128.03  Aligned_cols=158  Identities=15%  Similarity=0.053  Sum_probs=108.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLS-------QL   94 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (396)
                      .|+|+||||||+|+||.+++++|++     +|++|++++|+.... .....++.++.+|++|.++++++++       .+
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSE-----EGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHH-----TTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4568999999999999999999999     899999999975321 1122478899999999998877776       57


Q ss_pred             CCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           95 TDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        95 ~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      |.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +      .   
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------~------~---  153 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK------T------F---  153 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------C------C---
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC------C------C---
Confidence            78999887543211      134567899999999988876532  11245677776432221      0      0   


Q ss_pred             CCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceeec
Q 016047          167 EDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       167 E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                            + ....|+..|        .+...+ ...|+++..++|+.|..+
T Consensus       154 ------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~  195 (266)
T 3p19_A          154 ------P-DHAAYCGTKFAVHAISENVREEV-AASNVRVMTIAPSAVKTE  195 (266)
T ss_dssp             ------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBSSS
T ss_pred             ------C-CCchHHHHHHHHHHHHHHHHHHh-cccCcEEEEEeeCccccc
Confidence                  1 112265422        222222 346899999999999884

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.51  E-value=2.3e-13  Score=124.24  Aligned_cols=156  Identities=20%  Similarity=0.144  Sum_probs=106.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++     
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAA-----RGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999975321      0 112478899999999998877665     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceeecccccccccCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                        .+|.++|+|+......      ++....+++|+.|+.++++++.+.    ..+..+++++||...+.      +    
T Consensus        99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~------~----  168 (279)
T 3sju_A           99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ------G----  168 (279)
T ss_dssp             HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS------C----
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc------C----
Confidence              5688999887543211      134567899999999999987651    11245777776432211      0    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                        .         + ....|+..|.     .....  ....|+++..++|+.|.+
T Consensus       169 --~---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T  210 (279)
T 3sju_A          169 --V---------M-YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVET  210 (279)
T ss_dssp             --C---------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCS
T ss_pred             --C---------C-CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccc
Confidence              0         1 1122664332     22211  134689999999999987

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.50  E-value=2.9e-13  Score=124.67  Aligned_cols=212  Identities=13%  Similarity=0.057  Sum_probs=132.4

Q ss_pred             CCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|++|||||+|  +||.+++++|++     +|++|++++|+....      ......+.++.+|++|+++++++++    
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCA-----QGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            58999999998  999999999999     899999999985321      0011346789999999998877765    


Q ss_pred             ---cCCCeeEEEEeccC--------CC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC
Q 016047           93 ---QLTDVTHIFYVTWT--------NR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~--------~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                         .+|.++|+|+....        ..  ++....+++|+.|+.++++++...-.+-.+++++||...+.      +   
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~------~---  175 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK------V---  175 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS------C---
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc------C---
Confidence               46789998875421        11  14567889999999999999887633344677666422110      0   


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcC
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  231 (396)
                         .         + ....|+..|        .+...+ ...|+++..++|+.|..+........ ....  .....  .
T Consensus       176 ---~---------~-~~~~Y~asKaal~~l~~~la~e~-~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~--~~~~~--~  236 (296)
T 3k31_A          176 ---V---------P-HYNVMGVCKAALEASVKYLAVDL-GKQQIRVNAISAGPVRTLASSGISDF-HYIL--TWNKY--N  236 (296)
T ss_dssp             ---C---------T-TTTHHHHHHHHHHHHHHHHHHHH-HTTTEEEEEEEECCCCCSSCCSCHHH-HHHH--HHHHH--H
T ss_pred             ---C---------C-CchhhHHHHHHHHHHHHHHHHHH-hhcCcEEEEEEECCCcCchhhcccch-HHHH--HHHHh--c
Confidence               0         1 112265422        222222 45689999999999998432221111 1110  00111  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCCee
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGDVF  281 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~~~  281 (396)
                      .|+.            ...+..++|.++++++..  ....|+++++.+|..+
T Consensus       237 ~p~~------------r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          237 SPLR------------RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             STTS------------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCC------------CCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence            1211            112344557888887754  2345899999876543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.50  E-value=5.7e-14  Score=126.09  Aligned_cols=210  Identities=13%  Similarity=0.054  Sum_probs=121.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCC-ChHHHHHHHhcCCCeeEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVS-DPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~-d~~~~~~~~~~~~~V~h~  100 (396)
                      +..+|+||||||+|+||.+++++|++     +|++|++++|++.... ....+.++ +|+. +.+.+.+.+.++|.|+|+
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~-~~~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQ-----EGAEVTICARNEELLK-RSGHRYVV-CDLRKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHH-HTCSEEEE-CCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCHHHHH-hhCCeEEE-eeHHHHHHHHHHHhcCCCEEEEC
Confidence            34568999999999999999999999     8999999999752110 00246667 9993 223344444477889999


Q ss_pred             EEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCCCCC
Q 016047          101 FYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRL  172 (396)
Q Consensus       101 a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~  172 (396)
                      |+......      ++....+++|+.|+.++.+++...  ..+..+++++||...|       ..     .         
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~---------  147 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI-------SP-----I---------  147 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------SC-----C---------
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhc-------CC-----C---------
Confidence            87532211      134667899999977665554322  1125678877653322       11     0         


Q ss_pred             CCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047          173 DAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  244 (396)
Q Consensus       173 ~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  244 (396)
                      + ....|+..|.        +.... ...|+++.+++|+.|.+  +... ........ ..+..  ..|+   +      
T Consensus       148 ~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~Pg~v~t--~~~~-~~~~~~~~-~~~~~--~~p~---~------  210 (249)
T 1o5i_A          148 E-NLYTSNSARMALTGFLKTLSFEV-APYGITVNCVAPGWTET--ERVK-ELLSEEKK-KQVES--QIPM---R------  210 (249)
T ss_dssp             T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC--TTHH-HHSCHHHH-HHHHT--TSTT---S------
T ss_pred             C-CCchHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCCCcc--Cccc-ccchhhHH-HHHHh--cCCC---C------
Confidence            1 1122553222        22222 34689999999999998  3210 00000100 00011  1111   0      


Q ss_pred             eeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          245 CYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       245 ~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                      .   ..+..++|+++++++..+  ...|++|++.++.
T Consensus       211 ~---~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          211 R---MAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             S---CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             C---CcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            1   224455578877777543  2348899988764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.50  E-value=9.3e-14  Score=125.20  Aligned_cols=157  Identities=14%  Similarity=0.035  Sum_probs=106.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      |+|+||||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|++|+++++++++    
T Consensus         1 m~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   75 (256)
T 1geg_A            1 MKKVALVTGAGQGIGKAIALRLVK-----DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARK   75 (256)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            568999999999999999999999     899999999975321      0 012467889999999998888776    


Q ss_pred             ---cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccC--CC-cceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNA--PN-LRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~-~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.++|+|+.....      .++....+++|+.|+.++++++.+..  .+ ..+++++||...+      ++    
T Consensus        76 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------~~----  145 (256)
T 1geg_A           76 TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH------VG----  145 (256)
T ss_dssp             HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------SC----
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc------CC----
Confidence               678899998753211      11345678999999998888776541  11 3577776643211      11    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                        .         + ....|+..|.     .....  ....|+++.+++|+.|.+
T Consensus       146 --~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  187 (256)
T 1geg_A          146 --N---------P-ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKT  187 (256)
T ss_dssp             --C---------T-TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred             --C---------C-CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCcc
Confidence              0         1 1122654322     22211  134689999999999988

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.50  E-value=1.3e-13  Score=125.79  Aligned_cols=158  Identities=15%  Similarity=0.137  Sum_probs=106.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|++...         ......+.++.+|++|+++++++++   
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQ-----QGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            57999999999999999999999     899999999975321         0011357889999999998877776   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHH----HHHHHHHHcccCCCcceEEEeccceeecccccccccC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSM----FRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~g----t~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                          .+|.|+|+|+......      .+....+++|+.+    ++++++.+++.+..-.+++++||...+       +  
T Consensus       107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~-------~--  177 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH-------R--  177 (279)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT-------S--
T ss_pred             HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhc-------c--
Confidence                6788999987533211      1456678999999    777777776653112577777643221       1  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHHH-----HHHhh--c--CCCeeEEEEcCCceee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDIL-----FEEVE--K--KEELSWSVHRPDTIFG  207 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~l-----~~~~~--~--~~~~~~~ilRp~~v~G  207 (396)
                         ..+      . + ....|+..|..     ..+..  .  ..++++.+++|+.|.+
T Consensus       178 ---~~~------~-~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t  224 (279)
T 1xg5_A          178 ---VLP------L-S-VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVET  224 (279)
T ss_dssp             ---CCS------C-G-GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCS
T ss_pred             ---cCC------C-C-CCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccc
Confidence               001      0 1 11225543222     21110  2  5689999999999887

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.50  E-value=9.3e-13  Score=122.43  Aligned_cols=155  Identities=17%  Similarity=0.105  Sum_probs=106.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCeeEEEecCCChH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSDPE   85 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d~~   85 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|......                   ....++.++.+|++|++
T Consensus        46 gk~~lVTGas~GIG~aia~~la~-----~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQ-----DGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            58999999999999999999999     8999999987632100                   01246789999999999


Q ss_pred             HHHHHHh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeec
Q 016047           86 ETQAKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYL  149 (396)
Q Consensus        86 ~~~~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~  149 (396)
                      +++++++       .+|.++|+|+......      ++....+++|+.|+.++++++...   ...-.+|+++||...+.
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence            8877765       5788999987543211      145677899999999999988653   11234577666432221


Q ss_pred             ccccccccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          150 GPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       150 ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                            +      .         + ....|+..|.        +...+ ...|+++..++|+.|.+
T Consensus       201 ------~------~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T  243 (317)
T 3oec_A          201 ------G------A---------P-GQSHYAASKHGVQGLMLSLANEV-GRHNIRVNSVNPGAVNT  243 (317)
T ss_dssp             ------C------C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBSS
T ss_pred             ------C------C---------C-CCcchHHHHHHHHHHHHHHHHHH-hhcCeEEEEEecCcccC
Confidence                  1      0         1 1123654322        22222 34689999999999988

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.49  E-value=1.1e-13  Score=127.19  Aligned_cols=211  Identities=12%  Similarity=0.042  Sum_probs=130.0

Q ss_pred             CCEEEEEcCCCh--hHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGI--VGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGf--iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+|+  ||.+++++|++     .|++|++++|+....     . ....++.++.+|++|+++++++++    
T Consensus        31 gk~~lVTGasg~~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAARE-----AGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHH-----TTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence            579999999999  99999999999     899999999874210     0 011357899999999998877765    


Q ss_pred             ---cCCCeeEEEEeccC--------C--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC
Q 016047           93 ---QLTDVTHIFYVTWT--------N--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~--------~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                         .+|.++|+|+....        .  .++....+++|+.++.++++++...-.+-.+++++||...+       ..  
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~-------~~--  176 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAE-------KV--  176 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGT-------SB--
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhc-------cC--
Confidence               56889999875421        0  11456688999999999999887753334567766643221       10  


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcC
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG  231 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~  231 (396)
                                  .+ ....|+..|        .+...+ ...|+++..++|+.|..+..............   ...  .
T Consensus       177 ------------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~---~~~--~  237 (293)
T 3grk_A          177 ------------MP-NYNVMGVAKAALEASVKYLAVDL-GPQNIRVNAISAGPIKTLAASGIGDFRYILKW---NEY--N  237 (293)
T ss_dssp             ------------CT-TTTHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCCCC------CCHHHHHHH---HHH--H
T ss_pred             ------------CC-chHHHHHHHHHHHHHHHHHHHHH-hHhCCEEEEEecCCCcchhhhcccchHHHHHH---HHh--c
Confidence                        01 112265422        222222 34689999999999988422111111111100   111  1


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCe
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  280 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~  280 (396)
                      .|+.         .   ..+..++|.++++++...  ...|+++++.+|..
T Consensus       238 ~p~~---------r---~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (293)
T 3grk_A          238 APLR---------R---TVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYH  276 (293)
T ss_dssp             STTS---------S---CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCC---------C---CCCHHHHHHHHHHHcCccccCCcceEEEECCCcc
Confidence            1211         1   223445577777777542  34589999987654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.49  E-value=3.2e-13  Score=121.85  Aligned_cols=116  Identities=9%  Similarity=0.074  Sum_probs=85.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|+++.++....       . ....++.++.+|++|+++++++++   
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQ-----EGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899999986553221       0 112467899999999998877776   


Q ss_pred             ----cCCCeeEEEEeccCCC---c----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047           93 ----QLTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                          .+|.++|+|+......   +    .....+++|+.|+.++++++.....+-.+++++||
T Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  144 (259)
T 3edm_A           82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS  144 (259)
T ss_dssp             HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence                5677888876431111   1    34667899999999999999875322235666654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.49  E-value=1.2e-13  Score=126.35  Aligned_cols=211  Identities=16%  Similarity=0.139  Sum_probs=130.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh------cC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS------QL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~------~~   94 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|.++++++++      .+
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~-----~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i  104 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHA-----DGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRL  104 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999     8999999999753210    012468899999999998888776      35


Q ss_pred             CCeeEEEEeccCCC--------c----cHHHHHHhHHHHHHHHHHHHcccC--------CCcceEEEeccceeecccccc
Q 016047           95 TDVTHIFYVTWTNR--------S----TEAENCKINGSMFRNVLRAVIPNA--------PNLRHVCLQTGTKHYLGPFEA  154 (396)
Q Consensus        95 ~~V~h~a~~~~~~~--------~----~~~~~~~~nv~gt~~ll~a~~~~~--------~~~~~~~~~s~~~~y~ss~~~  154 (396)
                      |.++|+++......        .    .....+++|+.++.++++++....        .+-.+++++||...+..    
T Consensus       105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  180 (281)
T 3ppi_A          105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG----  180 (281)
T ss_dssp             EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC----
T ss_pred             CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC----
Confidence            56777733221110        1    246788999999999998876431        12346777764322210    


Q ss_pred             cccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHH
Q 016047          155 FGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAV  226 (396)
Q Consensus       155 ~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i  226 (396)
                              .         + ....|+..|.        +...+ ...|+++..++|+.|..+.......  ....   ..
T Consensus       181 --------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~---~~  236 (281)
T 3ppi_A          181 --------Q---------I-GQTAYAAAKAGVIGLTIAAARDL-SSAGIRVNTIAPGTMKTPIMESVGE--EALA---KF  236 (281)
T ss_dssp             --------C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCHHHHTTCH--HHHH---HH
T ss_pred             --------C---------C-CCcccHHHHHHHHHHHHHHHHHH-hhcCeEEEEEecCcCCchhhhcccH--HHHH---HH
Confidence                    0         1 1123664333        22222 3458999999999987731111100  0000   00


Q ss_pred             hhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCee
Q 016047          227 CKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVF  281 (396)
Q Consensus       227 ~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~  281 (396)
                      ..  ..+  .++      .   ..+..++|+++++++.+....|+++++.+|..+
T Consensus       237 ~~--~~~--~~~------~---~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~  278 (281)
T 3ppi_A          237 AA--NIP--FPK------R---LGTPDEFADAAAFLLTNGYINGEVMRLDGAQRF  278 (281)
T ss_dssp             HH--TCC--SSS------S---CBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCC
T ss_pred             Hh--cCC--CCC------C---CCCHHHHHHHHHHHHcCCCcCCcEEEECCCccc
Confidence            11  111  111      1   234455688888888766667899999887654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.49  E-value=8.5e-14  Score=127.38  Aligned_cols=158  Identities=15%  Similarity=-0.020  Sum_probs=108.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|.+++.++++    
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGR-----RGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999     899999999975321       0 012467889999999988776654    


Q ss_pred             ---cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 ---QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                         .+|.++|+|+.....      .++....+++|+.|+.++++++.+.-.+..+++++||...+      .+      .
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------~~------~  171 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ------AK------A  171 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT------CS------S
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhc------cC------C
Confidence               578899998754321      11456778999999999999988752234577777643211      00      0


Q ss_pred             CccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeec
Q 016047          164 PFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                               +.....|+..|.     .....  ....|+++.+++|+.|.++
T Consensus       172 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  214 (283)
T 1g0o_A          172 ---------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  214 (283)
T ss_dssp             ---------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             ---------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence                     001223664332     22111  0346899999999999883

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.49  E-value=1.1e-12  Score=119.64  Aligned_cols=218  Identities=15%  Similarity=0.056  Sum_probs=130.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC---------C-----------CCCCCCeeEEEecCCCh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---------N-----------WNADHLVEYVQCDVSDP   84 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---------~-----------~~~~~~v~~~~~Dl~d~   84 (396)
                      +|++|||||+|.||.+++++|++     +|++|++++|....         .           .....++.++.+|++|+
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAA-----EGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF   85 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             CCEEEEECCccHHHHHHHHHHHH-----cCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            58999999999999999999999     89999999984210         0           00124678999999999


Q ss_pred             HHHHHHHh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceee
Q 016047           85 EETQAKLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHY  148 (396)
Q Consensus        85 ~~~~~~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y  148 (396)
                      ++++++++       .+|.++|+|+......      ++....+++|+.|+.++++++...   ..+-.+++++||...+
T Consensus        86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  165 (277)
T 3tsc_A           86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM  165 (277)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence            98877665       4788999887543221      145667899999999999886653   1113467777643222


Q ss_pred             cccccccccCCCCCCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHH
Q 016047          149 LGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGAL  220 (396)
Q Consensus       149 ~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~  220 (396)
                      .      +      .         + ....|+..|        .+...+ ...|+++..++|+.|..+.  .........
T Consensus       166 ~------~------~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~T~~--~~~~~~~~~  220 (277)
T 3tsc_A          166 K------M------Q---------P-FMIHYTASKHAVTGLARAFAAEL-GKHSIRVNSVHPGPVNTPM--GSGDMVTAV  220 (277)
T ss_dssp             S------C------C---------S-SCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBSSGG--GSHHHHHHH
T ss_pred             C------C------C---------C-CchhhHHHHHHHHHHHHHHHHHh-CccCeEEEEEEeCCCcCCc--ccchhhhhh
Confidence            1      0      0         1 112265432        222222 3468999999999998832  111111111


Q ss_pred             HHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCC--CCCceeeecCCC
Q 016047          221 CVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPY--AKNEAFNCNNGD  279 (396)
Q Consensus       221 ~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~--~~g~~~ni~~~~  279 (396)
                      ............   ......   .. .+.+..++|.++++++..+.  ..|+++++.+|.
T Consensus       221 ~~~~~~~~~~~~---~~~~~~---p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          221 GQAMETNPQLSH---VLTPFL---PD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             HHHHHTCGGGTT---TTCCSS---SC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhcccccHHHHH---Hhhhcc---CC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            000000000000   000000   11 23455666888888876433  358899987764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.48  E-value=6.9e-14  Score=125.84  Aligned_cols=157  Identities=15%  Similarity=0.047  Sum_probs=104.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--C--CCCCeeEEEecCCChHHHHHHHhc------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--N--ADHLVEYVQCDVSDPEETQAKLSQ------   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--~--~~~~v~~~~~Dl~d~~~~~~~~~~------   93 (396)
                      .+|+||||||+|+||++++++|++     +|++|++++|+.....  .  ...++.++.+|++|+++++++++.      
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLG-----EGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            458999999999999999999999     8999999999753210  0  014678999999999988776654      


Q ss_pred             -CCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           94 -LTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        94 -~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                       +|.++|+|+.....    .  ++....+++|+.|+.++.+++...  ..+ .+++++||...|       ..     . 
T Consensus        80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~-------~~-----~-  145 (253)
T 1hxh_A           80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSW-------LP-----I-  145 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGT-------SC-----C-
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhc-------CC-----C-
Confidence             58899998753221    1  145667899999877766655432  112 678877643222       10     0 


Q ss_pred             ccCCCCCCCCCCcchhHHHH-----HHHHhh--cCC--CeeEEEEcCCceeec
Q 016047          165 FTEDMPRLDAPNFYYTLEDI-----LFEEVE--KKE--ELSWSVHRPDTIFGF  208 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~~~--~~~~~ilRp~~v~G~  208 (396)
                              + ....|+..|.     ......  ...  |+++.++||+.|+++
T Consensus       146 --------~-~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~  189 (253)
T 1hxh_A          146 --------E-QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP  189 (253)
T ss_dssp             --------T-TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred             --------C-CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCc
Confidence                    1 1122654322     222210  122  899999999999983

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.48  E-value=1.2e-12  Score=119.24  Aligned_cols=157  Identities=13%  Similarity=-0.043  Sum_probs=106.7

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CC-CCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WN-ADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~-~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|+||||||+  |+||.+++++|++     +|++|++++|+....     .. ...++.++.+|++|+++++++++   
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFN-----QGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHT-----TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHH
Confidence            35899999999  9999999999999     899999999986410     00 01247899999999998877766   


Q ss_pred             ----cCCCeeEEEEeccC--------CC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccC
Q 016047           93 ----QLTDVTHIFYVTWT--------NR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~--------~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                          .+|.++|+|+....        ..  ++....+++|+.|+.++++++...-.+-.+++++||...+      .+  
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------~~--  151 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST------KY--  151 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT------SB--
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhc------CC--
Confidence                45778888875321        11  1456678999999999999988752112466666542211      00  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHHH--------HHHhhcCCCeeEEEEcCCceeec
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~l--------~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                          .         + ....|+..|..        ...+ ...|+++.+++|+.|.++
T Consensus       152 ----~---------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~  194 (275)
T 2pd4_A          152 ----M---------A-HYNVMGLAKAALESAVRYLAVDL-GKHHIRVNALSAGPIRTL  194 (275)
T ss_dssp             ----C---------T-TCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEEEEECCCCCT
T ss_pred             ----C---------C-CchhhHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCccccc
Confidence                0         1 11126543222        2222 356899999999999883

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.48  E-value=3.3e-13  Score=121.09  Aligned_cols=158  Identities=16%  Similarity=0.091  Sum_probs=104.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-CCC---C-CCCCCeeEEEecCCChHHHHHHHh------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN---W-NADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~---~-~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|++ ...   . ....++.++.+|++|+++++++++      
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAV-----EGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            357999999999999999999999     899999999986 211   0 012468889999999998877654      


Q ss_pred             -cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                       .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...|       ..     .
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~  148 (249)
T 2ew8_A           81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW-------LK-----I  148 (249)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG-------SC-----C
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc-------cC-----C
Confidence             6788999987532211      145667899999988888775432  1124677777653322       10     0


Q ss_pred             CccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceeec
Q 016047          164 PFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                               + ....|+..|     +.....  ....|+++.+++|+.|.++
T Consensus       149 ---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  190 (249)
T 2ew8_A          149 ---------E-AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTA  190 (249)
T ss_dssp             ---------S-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---
T ss_pred             ---------C-CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCc
Confidence                     1 112255422     222211  0345899999999999883

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.48  E-value=4e-13  Score=122.02  Aligned_cols=157  Identities=13%  Similarity=0.029  Sum_probs=107.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....       . ....++.++.+|++|+++++++++   
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGR-----LGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999     899999988764221       0 012468899999999998877765   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                          .+|.++|+|+......      ++....+++|+.|+.++++++.....+-.+++++||..         +.    .
T Consensus        92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~---------~~----~  158 (270)
T 3is3_A           92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT---------SK----D  158 (270)
T ss_dssp             HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT---------TT----T
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch---------hc----c
Confidence                5678889887543211      14567789999999999998887633334677665321         00    0


Q ss_pred             CCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      .+       .+ ....|+..|.        +...+ ...|+++..++|+.|..
T Consensus       159 ~~-------~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~T  202 (270)
T 3is3_A          159 FS-------VP-KHSLYSGSKGAVDSFVRIFSKDC-GDKKITVNAVAPGGTVT  202 (270)
T ss_dssp             CC-------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS
T ss_pred             CC-------CC-CCchhHHHHHHHHHHHHHHHHHh-cccCeEEEEEEeCCccC
Confidence            00       01 1223654322        22222 34689999999999988

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.48  E-value=2.4e-12  Score=118.67  Aligned_cols=156  Identities=16%  Similarity=0.082  Sum_probs=107.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------------------CCCCCCeeEEEecCCChH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------------WNADHLVEYVQCDVSDPE   85 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------------~~~~~~v~~~~~Dl~d~~   85 (396)
                      +|++|||||+|.||.+++++|++     .|++|++++|++...                   .....++.++.+|++|++
T Consensus        28 gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLAR-----EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD  102 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence            58999999999999999999999     899999999873210                   001246789999999999


Q ss_pred             HHHHHHh-------cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceee
Q 016047           86 ETQAKLS-------QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHY  148 (396)
Q Consensus        86 ~~~~~~~-------~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y  148 (396)
                      +++++++       .+|.++|+|+......       ++....+++|+.|+.++++++...   ..+..+++++||...+
T Consensus       103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~  182 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL  182 (299)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence            8877665       5788999887543221       145678899999999999987654   1224577777643222


Q ss_pred             cccccccccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceeec
Q 016047          149 LGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       149 ~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      .      +      .         + ....|+..|.        +...+ ...|+++..++|+.|..+
T Consensus       183 ~------~------~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T~  227 (299)
T 3t7c_A          183 R------G------A---------E-NIGNYIASKHGLHGLMRTMALEL-GPRNIRVNIVCPSSVATP  227 (299)
T ss_dssp             S------C------C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCBSST
T ss_pred             c------C------C---------C-CcchHHHHHHHHHHHHHHHHHHh-cccCcEEEEEecCCccCc
Confidence            1      0      0         1 1122654322        22222 345899999999999884

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.48  E-value=5.6e-14  Score=130.78  Aligned_cols=158  Identities=19%  Similarity=0.078  Sum_probs=107.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHhc-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQ-   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~~-   93 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....         .....++.++.+|++|+++++++++. 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~-----~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLN-----QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEV   81 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            357999999999999999999999     899999999985321         00112688999999999988887764 


Q ss_pred             ------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCC--------CcceEEEeccceeeccccc
Q 016047           94 ------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAP--------NLRHVCLQTGTKHYLGPFE  153 (396)
Q Consensus        94 ------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~--------~~~~~~~~s~~~~y~ss~~  153 (396)
                            +|.|+|+|+......      ++....+++|+.|+.++++++.....        +-.+|+++||...+.+   
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~---  158 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA---  158 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC---
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC---
Confidence                  477888877532211      14566889999999999998876521        2346777764322210   


Q ss_pred             ccccCCCCCCCccCCCCCCCCCCcchhHHHH----HHHHh---hcCCCeeEEEEcCCceeec
Q 016047          154 AFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI----LFEEV---EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       154 ~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~----l~~~~---~~~~~~~~~ilRp~~v~G~  208 (396)
                               .         + ....|+..|.    +.+.+   ....|+++++++|+.|.++
T Consensus       159 ---------~---------~-~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~  201 (319)
T 3ioy_A          159 ---------A---------G-SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSY  201 (319)
T ss_dssp             ---------C---------S-SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC--
T ss_pred             ---------C---------C-CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccC
Confidence                     0         1 1123665443    22211   1345899999999999883

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.48  E-value=3.3e-13  Score=124.53  Aligned_cols=155  Identities=14%  Similarity=0.026  Sum_probs=107.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|.++++++++     
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFAR-----RGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL  105 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            47999999999999999999999     899999999975321      0 012468899999999998877765     


Q ss_pred             --cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 --QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                        .+|.++|+|+.....      .++....+++|+.|+.++++++...   .....+++++||...+.      +     
T Consensus       106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------~-----  174 (301)
T 3tjr_A          106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV------P-----  174 (301)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS------C-----
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------C-----
Confidence              578899998754321      1145668899999999999987653   11135677776432221      0     


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                       .         + ....|+..|.        +...+ ...|+++.+++|+.|..
T Consensus       175 -~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T  216 (301)
T 3tjr_A          175 -N---------A-GLGTYGVAKYGVVGLAETLAREV-KPNGIGVSVLCPMVVET  216 (301)
T ss_dssp             -C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEECCSCCCS
T ss_pred             -C---------C-CchHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEECCcccc
Confidence             0         1 1123664332        22222 34589999999998877

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.48  E-value=1.1e-13  Score=126.25  Aligned_cols=157  Identities=15%  Similarity=0.117  Sum_probs=106.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....      .....++.++.+|++|+++++++++      
T Consensus        29 ~k~vlVTGas~gIG~aia~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           29 GRIALVTGGSRGIGQMIAQGLLE-----AGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            57999999999999999999999     899999999975321      1111267889999999998877776      


Q ss_pred             -cCCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc----C--CCcceEEEeccceeecccccccccCC
Q 016047           93 -QLTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN----A--PNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~----~--~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                       .+|.++|+|+.....      .++....+++|+.|+.++++++...    +  .+..+++++||...+       ..  
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~-------~~--  174 (276)
T 2b4q_A          104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI-------SA--  174 (276)
T ss_dssp             SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT-------CC--
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc-------CC--
Confidence             578899998754321      1245678899999998888776532    2  113678877653322       10  


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                         .         +...+.|+..|     +...+.  ....|+++.+++|+.|..
T Consensus       175 ---~---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T  217 (276)
T 2b4q_A          175 ---M---------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPS  217 (276)
T ss_dssp             ---C---------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCS
T ss_pred             ---C---------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcC
Confidence               0         00111265422     222211  134589999999999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.48  E-value=3.6e-13  Score=122.11  Aligned_cols=158  Identities=15%  Similarity=0.043  Sum_probs=106.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      ++|+||||||+|+||.+++++|++     +|++|++++|+....      .  ....++.++.+|++|+++++++++   
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAE-----AGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0  002357889999999998877765   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||..+        +.   
T Consensus        95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--------~~---  163 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV--------EE---  163 (267)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG--------TC---
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcch--------hc---
Confidence                5788999987533211      134567899999999998877543  123567787764210        10   


Q ss_pred             CCCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                        .+.       + ....|+..|     +.....  ....|+++.+++|+.|..
T Consensus       164 --~~~-------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T  207 (267)
T 1vl8_A          164 --VTM-------P-NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRT  207 (267)
T ss_dssp             --CCS-------S-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCS
T ss_pred             --cCC-------C-CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcc
Confidence              000       1 112365432     222211  134589999999999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.47  E-value=1.1e-13  Score=124.89  Aligned_cols=156  Identities=12%  Similarity=0.072  Sum_probs=107.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--C------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--N------W-NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~------~-~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      |+|++|||||+|+||.+++++|++     +|++|++++|+...  .      . ....++.++.+|++|+++++++++  
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   75 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAA-----DGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEA   75 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----HTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999     89999999997543  1      0 012468899999999998877765  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEeccceeecccccccccC
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                           .+|.++|+|+......      ++....+++|+.|+.++++++.+.  ..+. .+++++||...+.      +  
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~--  147 (258)
T 3a28_C           76 AEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ------G--  147 (258)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS------C--
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc------C--
Confidence                 6788999987533211      145667899999999999988764  1123 5777776432111      0  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHH-----HH---HHhhcCCCeeEEEEcCCceee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDI-----LF---EEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~---~~~~~~~~~~~~ilRp~~v~G  207 (396)
                          .         + ....|+..|.     ..   ..+ ...|+++.+++|+.|..
T Consensus       148 ----~---------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~t  189 (258)
T 3a28_C          148 ----F---------P-ILSAYSTTKFAVRGLTQAAAQEL-APKGHTVNAYAPGIVGT  189 (258)
T ss_dssp             ----C---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBCS
T ss_pred             ----C---------C-CchhHHHHHHHHHHHHHHHHHHH-HhhCeEEEEEECCccCC
Confidence                0         1 1122654222     22   222 34589999999999877

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.47  E-value=4.7e-14  Score=125.77  Aligned_cols=158  Identities=13%  Similarity=0.082  Sum_probs=104.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHH-------hcCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL-------SQLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-------~~~~~   96 (396)
                      |+|++|||||+|+||++++++|++     +|++|++++|++.... ...++.++.+|++| +++.+++       ..+|.
T Consensus         1 ~~k~vlVTGas~giG~~~a~~l~~-----~G~~V~~~~r~~~~~~-~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            1 MERKALVTGGSRGIGRAIAEALVA-----RGYRVAIASRNPEEAA-QSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHH-HHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHH-HhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999     8999999999864310 00136789999998 6554443       36788


Q ss_pred             eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      ++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...|       ..     .+    
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~~----  137 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTF-------TA-----GG----  137 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------SC-----CT----
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhc-------cC-----CC----
Confidence            999887532211      145677899999999998887543  1125678877653322       11     00    


Q ss_pred             CCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeec
Q 016047          169 MPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       169 ~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                          +.....|+..|.     ...+.  ....|+++.++||+.+.++
T Consensus       138 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  180 (239)
T 2ekp_A          138 ----PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETE  180 (239)
T ss_dssp             ----TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCc
Confidence                011223654322     22211  1345899999999999883

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.47  E-value=1.5e-13  Score=124.60  Aligned_cols=156  Identities=17%  Similarity=0.044  Sum_probs=105.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....      .   ....++.++.+|++|+++++++++  
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   86 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAA-----EGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   86 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0   002468899999999998877776  


Q ss_pred             -----cCCCeeEEEEeccC-C------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047           93 -----QLTDVTHIFYVTWT-N------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~-~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                           .+|.++|+|+.... .      .++....+++|+.|+.++++++.+.  ..+..+++++||...+.      +  
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~--  158 (267)
T 1iy8_A           87 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR------G--  158 (267)
T ss_dssp             HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------B--
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc------C--
Confidence                 57889999875322 1      1145667899999988776655432  11246777776432211      1  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                          .         + ....|+..|.     .   ...+ ...|+++.+++|+.|.+
T Consensus       159 ----~---------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~t  200 (267)
T 1iy8_A          159 ----I---------G-NQSGYAAAKHGVVGLTRNSAVEY-GRYGIRINAIAPGAIWT  200 (267)
T ss_dssp             ----C---------S-SBHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS
T ss_pred             ----C---------C-CCccHHHHHHHHHHHHHHHHHHH-HhcCeEEEEEEeCCCcC
Confidence                0         1 1122554322     2   2222 34689999999999988

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.47  E-value=1.2e-13  Score=126.30  Aligned_cols=158  Identities=11%  Similarity=0.079  Sum_probs=108.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCC---CeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADH---LVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~---~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      ++|++|||||+|+||.+++++|++     +|++|++++|+....      . ....   ++.++.+|++|+++++++++ 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQ-----EGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS   79 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0 0012   68899999999998877665 


Q ss_pred             ------cCCCeeEEEEeccCCC----------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccc
Q 016047           93 ------QLTDVTHIFYVTWTNR----------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEA  154 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~----------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~  154 (396)
                            .+|.|+|+|+......          +.....+++|+.|+.++++++....  .+ .+++++||...+      
T Consensus        80 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~------  152 (280)
T 1xkq_A           80 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAG------  152 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGS------
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCcccc------
Confidence                  5788999987543211          1356678999999999999887641  11 577777643222      


Q ss_pred             cccCCCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeec
Q 016047          155 FGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       155 ~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                       ..     .        .+ ....|+..|.     .....  ....|+++.+++|+.|.++
T Consensus       153 -~~-----~--------~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  198 (280)
T 1xkq_A          153 -PQ-----A--------QP-DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG  198 (280)
T ss_dssp             -SS-----C--------CC-SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred             -CC-----C--------CC-cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCC
Confidence             10     0        01 1223654322     22211  1357899999999999983

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.47  E-value=1.2e-13  Score=123.81  Aligned_cols=157  Identities=16%  Similarity=0.077  Sum_probs=108.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|+++++++++       
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAA-----DGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            468999999999999999999999     8999999999753210    002468899999999998877766       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                      .+|.++|+|+......      ++....+++|+.|+.++++++...   ..+..+++++||...+.      +      .
T Consensus        80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------~  147 (247)
T 3rwb_A           80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA------G------T  147 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH------T------C
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc------C------C
Confidence            5788999887543211      145667899999999998885433   11245777776533221      1      0


Q ss_pred             CccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceeec
Q 016047          164 PFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                               + ....|+..|        .+...+ ...|+++..++|+.|..+
T Consensus       148 ---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~vn~v~PG~v~t~  189 (247)
T 3rwb_A          148 ---------P-NMAAYVAAKGGVIGFTRALATEL-GKYNITANAVTPGLIESD  189 (247)
T ss_dssp             ---------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCCH
T ss_pred             ---------C-CchhhHHHHHHHHHHHHHHHHHh-hhcCeEEEEEeeCcCcCc
Confidence                     1 112265432        222222 346899999999999873

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.46  E-value=1.1e-12  Score=118.80  Aligned_cols=156  Identities=12%  Similarity=0.065  Sum_probs=104.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh---
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....         ......+..+.+|++++++++++++   
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g   84 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVA-----EGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYP   84 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence            58999999999999999999999     899999999975321         0012457789999999998888776   


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|+|+......      ++....+++|+.|+.++++++.+.  ..+..+++++||...+.      +      . 
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------~-  151 (267)
T 3t4x_A           85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM------P------S-  151 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS------C------C-
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc------C------C-
Confidence            5677888887543221      134566899999988777766543  12245777776432221      0      0 


Q ss_pred             ccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                              + ....|+..|.     .+...  ....|+++..++|+.|..
T Consensus       152 --------~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t  192 (267)
T 3t4x_A          152 --------Q-EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLT  192 (267)
T ss_dssp             --------T-TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCC
T ss_pred             --------C-cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecC
Confidence                    1 1223654322     22221  134579999999998887

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.46  E-value=8.7e-13  Score=119.44  Aligned_cols=156  Identities=12%  Similarity=-0.025  Sum_probs=106.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+....      .   ....++.++.+|++|+++++++++  
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLE-----AGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC   81 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0   112358899999999988776665  


Q ss_pred             -----cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047           93 -----QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                           .+|.++|+|+.....    .  ++....+++|+.|+.++++++...  ..+-.+++++||...+.      +   
T Consensus        82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~---  152 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ------P---  152 (265)
T ss_dssp             HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS------C---
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC------C---
Confidence                 467899988753221    1  145677899999999999988654  12245667666432110      0   


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                         .         + ....|+..|        .+...+ ...|+++..++|+.|..
T Consensus       153 ---~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~t  194 (265)
T 3lf2_A          153 ---E---------P-HMVATSAARAGVKNLVRSMAFEF-APKGVRVNGILIGLVES  194 (265)
T ss_dssp             ---C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ---C---------C-CchhhHHHHHHHHHHHHHHHHHh-cccCeEEEEEEeCcCcC
Confidence               0         1 112365422        222222 34689999999999987

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.46  E-value=1.3e-13  Score=124.63  Aligned_cols=156  Identities=18%  Similarity=0.129  Sum_probs=105.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~----   93 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|++++.++++.    
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGS-----LGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            58999999999999999999999     899999999975321      0 0124688999999999988776654    


Q ss_pred             ---CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           94 ---LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ---~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         +|.|+|+|+......       .+....+++|+.|+.++++++...  ..+..+++++||...+..           
T Consensus       104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  172 (262)
T 3rkr_A          104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP-----------  172 (262)
T ss_dssp             HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC-----------
T ss_pred             cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC-----------
Confidence               688999987522111       134667899999999999987553  123457777764322210           


Q ss_pred             CCCccCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                               . + ....|+..|     +...+.  ....|+++.+++|+.|..
T Consensus       173 ---------~-~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t  214 (262)
T 3rkr_A          173 ---------V-A-DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRT  214 (262)
T ss_dssp             ---------C-T-TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--
T ss_pred             ---------C-C-CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcC
Confidence                     0 1 112266432     222211  134689999999998876

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.46  E-value=1.3e-12  Score=118.09  Aligned_cols=161  Identities=13%  Similarity=0.034  Sum_probs=105.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------C-CCCCCeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      .+|++|||||+|.||.+++++|++     +|++|++++|.....         . ....++.++.+|++|+++++++++ 
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFAL-----ESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTT-----SSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            458999999999999999999999     899999998753210         0 012467899999999998877775 


Q ss_pred             ------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCC
Q 016047           93 ------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                            .+|.++|+|+......      ++....+++|+.|+.++++++...-.+-.+++++||...+..       .  
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~-------~--  155 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY-------T--  155 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH-------H--
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC-------C--
Confidence                  5677888877543221      134567899999999999988765222346676664332211       0  


Q ss_pred             CCCCccCCCCCCCCCCcchhHH---HHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLE---DILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e---~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                         +   .  .........+.+   +.+...+ ...|+++..++|+.|..
T Consensus       156 ---~---~--~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~T  196 (262)
T 3ksu_A          156 ---G---F--YSTYAGNKAPVEHYTRAASKEL-MKQQISVNAIAPGPMDT  196 (262)
T ss_dssp             ---C---C--CCC-----CHHHHHHHHHHHHT-TTTTCEEEEEEECCCCT
T ss_pred             ---C---C--CchhHHHHHHHHHHHHHHHHHH-HHcCcEEEEEeeCCCcC
Confidence               0   0  001111112222   3333322 45689999999998866

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.46  E-value=3e-13  Score=123.11  Aligned_cols=157  Identities=17%  Similarity=0.118  Sum_probs=106.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHH------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKL------   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~------   91 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|++++++++      
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           21 GTTALVTGGSKGIGYAIVEELAG-----LGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCcchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            58999999999999999999999     899999999975321      0 01246788999999999887766      


Q ss_pred             --hcCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           92 --SQLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        92 --~~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                        ..+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...|       ..    
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-------~~----  164 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF-------SA----  164 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT-------SC----
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhc-------CC----
Confidence              35788999887532211      145667899999999999988532  1124677777653322       11    


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                       .         + ....|+..|.     .....  ....|+++.+++|+.|.++
T Consensus       165 -~---------~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  207 (273)
T 1ae1_A          165 -L---------P-SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTP  207 (273)
T ss_dssp             -C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--
T ss_pred             -C---------C-CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCc
Confidence             0         1 1122654322     22211  1345899999999999984

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.46  E-value=1.6e-13  Score=122.92  Aligned_cols=156  Identities=20%  Similarity=0.140  Sum_probs=107.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      ++|++|||||+|+||.+++++|++     +|++|++++|++...      . ....++.++.+|++|+++++++++    
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   80 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAA-----EGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE   80 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321      0 012468899999999998877665    


Q ss_pred             ---cCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.++|+|+.....    .  ++....+++|+.|+.++++++....  .+ .+++++||...+.      +     
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~------~-----  148 (247)
T 2jah_A           81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV------N-----  148 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC------C-----
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC------C-----
Confidence               578899998753221    1  1346678999999999999886541  12 5777776432110      0     


Q ss_pred             CCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceeec
Q 016047          162 DPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                                .+ ....|+..|        .+...+ ...|+++.+++|+.|..+
T Consensus       149 ----------~~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~T~  191 (247)
T 2jah_A          149 ----------VR-NAAVYQATKFGVNAFSETLRQEV-TERGVRVVVIEPGTTDTE  191 (247)
T ss_dssp             ----------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBSSS
T ss_pred             ----------CC-CCcHHHHHHHHHHHHHHHHHHHh-cccCcEEEEEECCCCCCc
Confidence                      01 112265432        222222 356899999999999873

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.46  E-value=5e-13  Score=121.69  Aligned_cols=156  Identities=13%  Similarity=0.093  Sum_probs=107.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+.....       ....++.++.+|++|++++.++++    
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAG-----AGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     8999999999765420       012468899999999988777665    


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+       .      
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~-------~------  173 (275)
T 4imr_A          107 IAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQL-------R------  173 (275)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------S------
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhC-------C------
Confidence              5788999887532211      134667899999999999987543  1124567776643211       1      


Q ss_pred             CCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                             +. + ....|+..|.        +...+ ...|+++..++|+.|..
T Consensus       174 -------~~-~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T  216 (275)
T 4imr_A          174 -------PK-S-VVTAYAATKAAQHNLIQSQARDF-AGDNVLLNTLAPGLVDT  216 (275)
T ss_dssp             -------CC-T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBCS
T ss_pred             -------CC-C-CchhhHHHHHHHHHHHHHHHHHh-cccCcEEEEEEeccccC
Confidence                   00 0 1112654322        22222 34589999999999887

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.46  E-value=1.1e-12  Score=116.47  Aligned_cols=156  Identities=17%  Similarity=0.070  Sum_probs=104.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+....      .  ....++.++.+|++|++++.++++    
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALAR-----DGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLE   76 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence            37899999999999999999999     899999999975321      0  012478899999999998887765    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                         .+|.++|+|+......      ++....+++|+.|+.++++++...- .+-.+++.++|..      ..++      
T Consensus        77 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~------~~~~------  144 (235)
T 3l77_A           77 RFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDV------SARL------  144 (235)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGG------GSSC------
T ss_pred             hcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecch------hccc------
Confidence               5788999988543221      1456678999999999999886530 0122344333211      1111      


Q ss_pred             CCccCCCCCCCCCCcchhHHH-----HHHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTLED-----ILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      .         +. ...|+..|     +.+.+..+..++++..++|+.|-.
T Consensus       145 ~---------~~-~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T  184 (235)
T 3l77_A          145 I---------PY-GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDT  184 (235)
T ss_dssp             C---------TT-CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSS
T ss_pred             C---------CC-cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccc
Confidence            0         11 12255433     223222245689999999998876

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.46  E-value=2.9e-13  Score=123.07  Aligned_cols=156  Identities=12%  Similarity=-0.004  Sum_probs=105.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      ++|++|||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|+++++++++       
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAG-----AGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            458899999999999999999999     8999999999753210    001467899999999998887776       


Q ss_pred             cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                      .+|.++|+|+......       ++....+++|+.|+.++++++...    +.+-.+++++||...+.      +     
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------~-----  170 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS------P-----  170 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS------C-----
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC------C-----
Confidence            6788999988543211       134678899999988888877654    11135677776432110      0     


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                .+ ....|+..|.     .   ...+ ...++++..++|+.|..
T Consensus       171 ----------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T  212 (272)
T 4dyv_A          171 ----------RP-YSAPYTATKHAITGLTKSTSLDG-RVHDIACGQIDIGNADT  212 (272)
T ss_dssp             ----------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEEEECC-
T ss_pred             ----------CC-CchHHHHHHHHHHHHHHHHHHHh-CccCEEEEEEEECcccC
Confidence                      01 1122654222     2   2222 34689999999998887

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.45  E-value=2.1e-12  Score=118.15  Aligned_cols=115  Identities=15%  Similarity=0.060  Sum_probs=88.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--------------CCCCeeEEEecCCChHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------------ADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------------~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      +|++|||||+|.||.+++++|++     +|++|++++|+......              ...++.++.+|++|+++++++
T Consensus         9 ~k~vlVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            9 GKTMFISGGSRGIGLAIAKRVAA-----DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHT-----TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            58999999999999999999999     89999999998653100              124678999999999988777


Q ss_pred             Hh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047           91 LS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  144 (396)
Q Consensus        91 ~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  144 (396)
                      ++       .+|.++|+|+......      ++....+++|+.|+.++++++...-  .+..+++++||
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS  152 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP  152 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence            66       6788999987543211      1345678899999999999887762  23457777764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.45  E-value=9e-13  Score=119.44  Aligned_cols=156  Identities=13%  Similarity=0.033  Sum_probs=103.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|++|||||+|+||.+++++|++     +|++|+++.++....       . ....++.++.+|++|+++++++++    
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~-----~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLAS-----DGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHH-----HTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999     899999886654321       0 012467899999999998877765    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                         .+|.++|+|+......      +.....+++|+.|+.++++++.+.-.+-.+++++||...+.      +      .
T Consensus       102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------~  169 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL------L------H  169 (267)
T ss_dssp             HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH------C------C
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc------C------C
Confidence               5677888877532211      13456788999999999988876421124666665432111      0      0


Q ss_pred             CccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceee
Q 016047          164 PFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                               + ....|+..|.     .....  ....|+++..+.|+.|..
T Consensus       170 ---------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T  210 (267)
T 3u5t_A          170 ---------P-SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTAT  210 (267)
T ss_dssp             ---------T-TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-
T ss_pred             ---------C-CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcC
Confidence                     1 1122654222     22221  134689999999999877

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.45  E-value=3.9e-13  Score=120.79  Aligned_cols=116  Identities=13%  Similarity=0.101  Sum_probs=85.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecC--CChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDV--SDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl--~d~~~~~~~~~-   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....      .  .....+.++.+|+  +|+++++++++ 
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYAR-----YGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0  0112678999999  88988777665 


Q ss_pred             ------cCCCeeEEEEeccCC---C--c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 ------QLTDVTHIFYVTWTN---R--S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~---~--~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                            .+|.++|+|+.....   .  +  +....+++|+.|+.++++++...  ..+..+++++||
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS  152 (252)
T 3f1l_A           86 IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSS  152 (252)
T ss_dssp             HHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence                  578899998753211   1  1  34667899999999999988543  123456777664

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.44  E-value=2.3e-13  Score=123.65  Aligned_cols=159  Identities=14%  Similarity=0.082  Sum_probs=104.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcC-
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQL-   94 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~-   94 (396)
                      ..|.|++|||||+|+||.+++++|++     +|++|++++|++...      .....++.++.+|++|+++++++++.+ 
T Consensus        18 ~~~~k~vlVTGas~gIG~aia~~La~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   92 (272)
T 2nwq_A           18 SHMSSTLFITGATSGFGEACARRFAE-----AGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLP   92 (272)
T ss_dssp             ---CCEEEESSTTTSSHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCcCcEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34558999999999999999999999     899999999975321      111136889999999999999888764 


Q ss_pred             ------CCeeEEEEeccC-C------CccHHHHHHhHHHHHHHHHHHHccc--CCCcc-eEEEeccceeecccccccccC
Q 016047           95 ------TDVTHIFYVTWT-N------RSTEAENCKINGSMFRNVLRAVIPN--APNLR-HVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        95 ------~~V~h~a~~~~~-~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~-~~~~~s~~~~y~ss~~~~g~~  158 (396)
                            |.++|+|+.... .      .++....+++|+.|+.++++++...  ..+.. +++++||...+       .  
T Consensus        93 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~-------~--  163 (272)
T 2nwq_A           93 EEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGK-------W--  163 (272)
T ss_dssp             GGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGT-------S--
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhc-------c--
Confidence                  778888875321 1      1145667899999988877766532  01134 77776643211       1  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHH-----HHHHHhh--cCCCeeEEEEcCCceee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLED-----ILFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                           +       .+ ....|+..|     +......  ...|+++.+++|+.|.+
T Consensus       164 -----~-------~~-~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T  206 (272)
T 2nwq_A          164 -----P-------YP-GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCES  206 (272)
T ss_dssp             -----C-------CT-TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-
T ss_pred             -----C-------CC-CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcC
Confidence                 0       01 112266433     3222221  24579999999999987

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.44  E-value=1.8e-13  Score=125.42  Aligned_cols=116  Identities=13%  Similarity=0.051  Sum_probs=84.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+++||||||+|+||.+++++|++     +|++|++++|++....        ....++.++.+|++|+++++++++   
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~  101 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAK-----MGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAG  101 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     8999999999753210        011357899999999988877665   


Q ss_pred             ----cCCCeeEEE-EeccCC---C--ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecc
Q 016047           93 ----QLTDVTHIF-YVTWTN---R--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  144 (396)
Q Consensus        93 ----~~~~V~h~a-~~~~~~---~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  144 (396)
                          ++|.|+|+| +.....   .  .+....+++|+.|+.++++++.... .+..+++++||
T Consensus       102 ~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS  164 (286)
T 1xu9_A          102 KLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSS  164 (286)
T ss_dssp             HHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             HHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECC
Confidence                678899984 432211   1  1346678999999999998876531 11246776664

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.44  E-value=5.5e-13  Score=119.96  Aligned_cols=158  Identities=15%  Similarity=0.129  Sum_probs=105.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCCCCC--CC--CCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPN--WN--ADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~--~~--~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      |+|++|||||+|+||.+++++|++     .  |+.|++++|+....  ..  ...++.++.+|++|+++++++++     
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~-----~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFS-----LDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHH-----HCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHh-----cCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999987     4  57899999875321  00  01367899999999998877665     


Q ss_pred             --cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.++|+|+......       ++....+++|+.|+.++++++...- .+-.+++++||...+.             
T Consensus        76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~-------------  142 (254)
T 3kzv_A           76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNM-------------  142 (254)
T ss_dssp             HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCC-------------
T ss_pred             cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhcc-------------
Confidence              5788999988532211       1456688999999999999884320 0014677666432221             


Q ss_pred             CCccCCCCCCCCCCcchhHHH-----HHHHHhhcCCCeeEEEEcCCceeec
Q 016047          163 PPFTEDMPRLDAPNFYYTLED-----ILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~-----~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                       +       .+ ....|+..|     +......+..++++..++|+.|..+
T Consensus       143 -~-------~~-~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~  184 (254)
T 3kzv_A          143 -Y-------FS-SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTD  184 (254)
T ss_dssp             -S-------SC-CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCC
T ss_pred             -C-------CC-CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccch
Confidence             0       01 112366433     3333322335899999999999884

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.44  E-value=2.1e-13  Score=123.30  Aligned_cols=156  Identities=15%  Similarity=0.052  Sum_probs=106.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|++++.++++    
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAE-----EGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0 012467889999999988776665    


Q ss_pred             ---cCCCeeEEEEec-cCC------CccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVT-WTN------RSTEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~-~~~------~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.++|+|+.. ...      .++....+++|+.|+.++++++.+..  .+..+++++||...+.      +    
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~----  150 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK------G----  150 (262)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS------C----
T ss_pred             HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc------C----
Confidence               578899998753 111      11356678999999999999877641  1245777776532221      1    


Q ss_pred             CCCCccCCCCCCCCCCcchhHHH--------HHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTLED--------ILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~e~--------~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                        .         + ....|+..|        .+...+ ...|+++.+++|+.|..
T Consensus       151 --~---------~-~~~~Y~asK~a~~~~~~~la~e~-~~~gi~vn~v~PG~v~t  192 (262)
T 1zem_A          151 --P---------P-NMAAYGTSKGAIIALTETAALDL-APYNIRVNAISPGYMGP  192 (262)
T ss_dssp             --C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS
T ss_pred             --C---------C-CCchHHHHHHHHHHHHHHHHHHH-HhhCeEEEEEecCCcCc
Confidence              0         1 112265432        222222 35689999999998866

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.44  E-value=5.7e-13  Score=119.81  Aligned_cols=211  Identities=9%  Similarity=0.023  Sum_probs=127.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      .+|+||||||+|.||.+++++|++     .|++|+++.++....       . ....++.++.+|++|.++++.+++.  
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLAN-----DGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLD   80 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHH-----CCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899998876543211       0 0124678899999999877666543  


Q ss_pred             -----------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccc
Q 016047           94 -----------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        94 -----------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                                 +|.++|+|+......      +.....+++|+.|+.++++++...-.+-.+++++||...+       .
T Consensus        81 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~-------~  153 (255)
T 3icc_A           81 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR-------I  153 (255)
T ss_dssp             HHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGT-------S
T ss_pred             HHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhc-------c
Confidence                       677888877532211      1345678999999999999987652223467766643211       1


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhHHHHH--------HHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhh
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTLEDIL--------FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCK  228 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~e~~l--------~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~  228 (396)
                      .     .         + ....|+..|..        ...+ ...++++..++|+.|..+........ ..+..+   ..
T Consensus       154 ~-----~---------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~---~~  213 (255)
T 3icc_A          154 S-----L---------P-DFIAYSMTKGAINTMTFTLAKQL-GARGITVNAILPGFVKTDMNAELLSD-PMMKQY---AT  213 (255)
T ss_dssp             C-----C---------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBCCSSSTTTTTS-HHHHHH---HH
T ss_pred             C-----C---------C-CcchhHHhHHHHHHHHHHHHHHH-HhcCeEEEEEEEeeecccchhhhccc-HHHHHh---hh
Confidence            0     0         1 11236643222        2222 34589999999999988432211111 111000   00


Q ss_pred             hcCCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCceeeecCCC
Q 016047          229 HEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAFNCNNGD  279 (396)
Q Consensus       229 ~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~ni~~~~  279 (396)
                       ...++         ..+   .+..++|..+++++..  ....|+++++.+|.
T Consensus       214 -~~~~~---------~~~---~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          214 -TISAF---------NRL---GEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             -HTSTT---------SSC---BCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             -ccCCc---------CCC---CCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence             11111         012   2344457777777643  23458999998764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.42  E-value=2.8e-13  Score=121.50  Aligned_cols=155  Identities=15%  Similarity=0.112  Sum_probs=105.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC--CCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN--ADHLVEYVQCDVSDPEETQAKLS-------QL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (396)
                      |++|||||+|+||.+++++|++     +|++|++++|+....  ..  ...++.++.+|++|+++++++++       .+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQ-----QGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5799999999999999999999     899999999975321  00  01368899999999999988876       46


Q ss_pred             CCeeEEEEeccC--C-----CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           95 TDVTHIFYVTWT--N-----RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        95 ~~V~h~a~~~~~--~-----~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      |.++|+|+....  .     .++....+++|+.|+.++++++...  ..+..+++++||...+       .       + 
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~-------~-------~-  140 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS-------W-------P-  140 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-------S-------C-
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhc-------c-------C-
Confidence            778888875321  1     1145668899999999998887642  1124577777643211       1       0 


Q ss_pred             cCCCCCCCCCCcchhHHH-----HHHHHh--hcCCCeeEEEEcCCceee
Q 016047          166 TEDMPRLDAPNFYYTLED-----ILFEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~e~-----~l~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                            .+ ....|+..|     +.....  ....|+++.+++|+.|.|
T Consensus       141 ------~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g  182 (248)
T 3asu_A          141 ------YA-GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG  182 (248)
T ss_dssp             ------CT-TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred             ------CC-CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence                  01 112365432     222211  135689999999999985

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.42  E-value=8.5e-13  Score=123.27  Aligned_cols=207  Identities=15%  Similarity=0.091  Sum_probs=128.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCC------C--CCCCCeeEEEecCCChH----------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W--NADHLVEYVQCDVSDPE----------   85 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~------~--~~~~~v~~~~~Dl~d~~----------   85 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++ |+....      .  ....++.++.+|++|++          
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~-----~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  120 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHA-----EGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS  120 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence            47999999999999999999999     899999999 764211      0  01246889999999988          


Q ss_pred             -------HHHHHHh-------cCCCeeEEEEeccCC--------------------CccHHHHHHhHHHHHHHHHHHHcc
Q 016047           86 -------ETQAKLS-------QLTDVTHIFYVTWTN--------------------RSTEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        86 -------~~~~~~~-------~~~~V~h~a~~~~~~--------------------~~~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                             +++++++       .+|.++|+|+.....                    .++....+++|+.|+.++++++..
T Consensus       121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   8877665       578899998753221                    112345689999999999988765


Q ss_pred             c--CCC------cceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCe
Q 016047          132 N--APN------LRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEEL  195 (396)
Q Consensus       132 ~--~~~------~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~  195 (396)
                      .  ..+      ..+|+++||...+       .       +       .+ ....|+..|.        +...+ ...|+
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~-------~-------~-------~~-~~~~Y~asKaal~~l~~~la~el-~~~gI  257 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTN-------Q-------P-------LL-GYTIYTMAKGALEGLTRSAALEL-APLQI  257 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTT-------S-------C-------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTE
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhc-------c-------C-------CC-CcHHHHHHHHHHHHHHHHHHHHH-hhcCc
Confidence            3  111      4577777643211       1       0       01 1122654222        22222 34589


Q ss_pred             eEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcC--CCCCCcee
Q 016047          196 SWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVD--PYAKNEAF  273 (396)
Q Consensus       196 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~--~~~~g~~~  273 (396)
                      ++.+++|+.|..+. .. .   ....  ..+..  ..|+   +.     .   ..+..++|..+++++..  ....|+++
T Consensus       258 rvn~v~PG~v~T~~-~~-~---~~~~--~~~~~--~~p~---~~-----r---~~~pedvA~~v~~l~s~~~~~itG~~i  317 (328)
T 2qhx_A          258 RVNGVGPGLSVLVD-DM-P---PAVW--EGHRS--KVPL---YQ-----R---DSSAAEVSDVVIFLCSSKAKYITGTCV  317 (328)
T ss_dssp             EEEEEEESSBSCCC-CS-C---HHHH--HHHHT--TCTT---TT-----S---CBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             EEEEEecCcccCCc-cc-c---HHHH--HHHHh--hCCC---CC-----C---CCCHHHHHHHHHHHhCccccCccCcEE
Confidence            99999999998843 11 1   1110  00111  1121   10     1   12345567888887753  23458888


Q ss_pred             eecCCC
Q 016047          274 NCNNGD  279 (396)
Q Consensus       274 ni~~~~  279 (396)
                      ++.+|.
T Consensus       318 ~vdGG~  323 (328)
T 2qhx_A          318 KVDGGY  323 (328)
T ss_dssp             EESTTG
T ss_pred             EECCCc
Confidence            887764

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.41  E-value=6.5e-13  Score=119.36  Aligned_cols=116  Identities=11%  Similarity=0.021  Sum_probs=86.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....      . ....++.++.+|++|+++++++++    
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAA-----EGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHH-----TTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            357999999999999999999999     899999999976432      0 012468899999999998887776    


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                        .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS  142 (252)
T 3h7a_A           81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGA  142 (252)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred             hCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence              4577888887533211      145667899999999998877543  111346666654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.41  E-value=9.6e-13  Score=116.54  Aligned_cols=154  Identities=18%  Similarity=0.122  Sum_probs=104.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhcC----CCe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQL----TDV   97 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~~----~~V   97 (396)
                      |+||||||+|+||.+++++|++     +|++|++++|+....    .....++.++.+|++|+++++++++.+    |.|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDA-----EGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHH-----TTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence            5799999999999999999999     899999999975321    001246789999999999999998876    568


Q ss_pred             eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      +|+|+......      ++....+++|+.|+.++++++... ..+-.+++++||...+       ..             
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~-------~~-------------  136 (230)
T 3guy_A           77 VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQ-------QP-------------  136 (230)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGT-------SC-------------
T ss_pred             EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccC-------CC-------------
Confidence            88887533211      134567899999999999988765 2112267766643211       10             


Q ss_pred             CCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          171 RLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       171 ~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                       .+ ....|+..|.        +...+ ...|+++..++|+.|..
T Consensus       137 -~~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~t  178 (230)
T 3guy_A          137 -KA-QESTYCAVKWAVKGLIESVRLEL-KGKPMKIIAVYPGGMAT  178 (230)
T ss_dssp             -CT-TCHHHHHHHHHHHHHHHHHHHHT-TTSSCEEEEEEECCC--
T ss_pred             -CC-CCchhHHHHHHHHHHHHHHHHHH-HhcCeEEEEEECCcccC
Confidence             01 1123664322        22222 35589999999998876

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.41  E-value=4.5e-13  Score=119.11  Aligned_cols=155  Identities=14%  Similarity=0.010  Sum_probs=104.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|+||||||+|+||.+++++|++     +|++|++++|+.....    ....++.++.+|++|+++++++++       .
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   77 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVE-----RGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGL   77 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            37899999999999999999999     8999999999753210    001258899999999998877665       4


Q ss_pred             CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           94 LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        94 ~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      +|.++|+|+.....      .++....+++|+.|+.++++++... ..+-.+++++||...+.      +      .   
T Consensus        78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~------~------~---  142 (235)
T 3l6e_A           78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV------G------K---  142 (235)
T ss_dssp             CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS------S------C---
T ss_pred             CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC------C------C---
Confidence            68899998853321      1145678899999999998887554 11112677666432221      1      0   


Q ss_pred             CCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          167 EDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       167 E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                            + ....|+..|.        +...+ ...|+++..++|+.|-.
T Consensus       143 ------~-~~~~Y~asKaa~~~~~~~la~e~-~~~gi~v~~v~PG~v~T  183 (235)
T 3l6e_A          143 ------A-NESLYCASKWGMRGFLESLRAEL-KDSPLRLVNLYPSGIRS  183 (235)
T ss_dssp             ------S-SHHHHHHHHHHHHHHHHHHHHHT-TTSSEEEEEEEEEEECC
T ss_pred             ------C-CCcHHHHHHHHHHHHHHHHHHHh-hccCCEEEEEeCCCccC
Confidence                  1 1122654322        22222 45689999999998866

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.41  E-value=7.6e-13  Score=121.34  Aligned_cols=156  Identities=10%  Similarity=0.031  Sum_probs=106.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-CCC------C--CCCCCeeEEEecCCC----hHHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-KPN------W--NADHLVEYVQCDVSD----PEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-~~~------~--~~~~~v~~~~~Dl~d----~~~~~~~~   91 (396)
                      +|++|||||+|+||.+++++|++     +|++|++++|+. ...      .  ....++.++.+|++|    ++++++++
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~-----~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQ-----TGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHH-----HTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            58999999999999999999999     899999999986 211      0  012468899999999    88777666


Q ss_pred             h-------cCCCeeEEEEeccCC--------C-----c---cHHHHHHhHHHHHHHHHHHHcccCCC--------cceEE
Q 016047           92 S-------QLTDVTHIFYVTWTN--------R-----S---TEAENCKINGSMFRNVLRAVIPNAPN--------LRHVC  140 (396)
Q Consensus        92 ~-------~~~~V~h~a~~~~~~--------~-----~---~~~~~~~~nv~gt~~ll~a~~~~~~~--------~~~~~  140 (396)
                      +       .+|.++|+|+.....        .     .   +....+++|+.|+.++++++.....+        ..+++
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence            5       578899998753211        1     1   23457899999999999887665211        34677


Q ss_pred             EeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeec
Q 016047          141 LQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       141 ~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      ++||...+       .       +       .+ ....|+..|.     .   ...+ ...|+++.+++|+.|.++
T Consensus       178 ~isS~~~~-------~-------~-------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~t~  230 (288)
T 2x9g_A          178 NLCDAMVD-------Q-------P-------CM-AFSLYNMGKHALVGLTQSAALEL-APYGIRVNGVAPGVSLLP  230 (288)
T ss_dssp             EECCTTTT-------S-------C-------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSCSCC
T ss_pred             EEeccccc-------C-------C-------CC-CCchHHHHHHHHHHHHHHHHHHh-hccCeEEEEEEeccccCc
Confidence            66642211       1       0       01 1123664332     2   2222 345899999999999984

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.40  E-value=6.2e-13  Score=123.06  Aligned_cols=120  Identities=18%  Similarity=0.124  Sum_probs=87.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCCh-HHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDP-EETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~-~~~~~~~~--   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....        .....++.++.+|++|+ ++++++++  
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSS-----NGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321        01124789999999998 76655544  


Q ss_pred             -----cCCCeeEEEEeccCC------------------------------------CccHHHHHHhHHHHHHHHHHHHcc
Q 016047           93 -----QLTDVTHIFYVTWTN------------------------------------RSTEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~------------------------------------~~~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                           .+|.++|+|+.....                                    .+.....+++|+.|+.++++++..
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence                 678899998754210                                    012345689999999888887754


Q ss_pred             c--CCCcceEEEeccceee
Q 016047          132 N--APNLRHVCLQTGTKHY  148 (396)
Q Consensus       132 ~--~~~~~~~~~~s~~~~y  148 (396)
                      .  ..+..+++++||...+
T Consensus       166 ~l~~~~~~~IV~isS~~~~  184 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGS  184 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGS
T ss_pred             hhccCCCCeEEEEecCCcc
Confidence            3  1234678887765443

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.40  E-value=1.1e-12  Score=120.04  Aligned_cols=155  Identities=15%  Similarity=0.099  Sum_probs=105.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc---EEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW---KVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      +|+||||||+|.||.+++++|++     .|+   +|++++|+....         .....++.++.+|++|+++++++++
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~-----~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLE-----ASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHH-----HHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             CCEEEEecCCChHHHHHHHHHHH-----cCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            47999999999999999999998     676   999999975321         0012467899999999999988887


Q ss_pred             c-------CCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccc
Q 016047           93 Q-------LTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        93 ~-------~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                      .       +|.++|+|+......       ++....+++|+.|+.++++++...  ..+..+++++||...+      .+
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~------~~  181 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR------DA  181 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT------SC
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc------CC
Confidence            4       577888887543111       145678899999999999988532  1124567766643211      00


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhHHH-----H---HHHHhhcCCCeeEEEEcCCceee
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTLED-----I---LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~e~-----~---l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                            .         + ....|+..|     +   +...+ ...|+++..++|+.|..
T Consensus       182 ------~---------~-~~~~Y~asKaa~~~l~~~la~e~-~~~gIrvn~v~PG~v~T  223 (287)
T 3rku_A          182 ------Y---------P-TGSIYCASKFAVGAFTDSLRKEL-INTKIRVILIAPGLVET  223 (287)
T ss_dssp             ------C---------T-TCHHHHHHHHHHHHHHHHHHHHT-TTSSCEEEEEEESCEES
T ss_pred             ------C---------C-CCchHHHHHHHHHHHHHHHHHHh-hhcCCEEEEEeCCcCcC
Confidence                  0         1 112265432     2   22222 35789999999999987

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.39  E-value=7.1e-13  Score=119.84  Aligned_cols=157  Identities=16%  Similarity=0.061  Sum_probs=105.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      ++|++|||||+|.||.+++++|++     .|++|++++|+....      . ....++.++.+|++|+++++++++    
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   77 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGV-----AGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVD   77 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0 012467889999999998877665    


Q ss_pred             ---cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                         .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +     
T Consensus        78 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~------~-----  146 (264)
T 3tfo_A           78 TWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS------V-----  146 (264)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC------C-----
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc------c-----
Confidence               5788999987543211      145667899999999888877543  11245677776432211      0     


Q ss_pred             CCCccCCCCCCCCCCcchhHHHH-----HHHHhhcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTLEDI-----LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                .+ ....|+..|.     ......+..|+++..++|+.|..
T Consensus       147 ----------~~-~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T  186 (264)
T 3tfo_A          147 ----------VP-TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVES  186 (264)
T ss_dssp             ----------CT-TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--
T ss_pred             ----------CC-CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcC
Confidence                      01 1122664332     22222122489999999998877

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.39  E-value=8.1e-13  Score=129.68  Aligned_cols=156  Identities=19%  Similarity=0.143  Sum_probs=109.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCCC---------CC-CCCCeeEEEecCCChHHHHHHH
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN---------WN-ADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~---------~~-~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ..+++||||||+|+||.+++++|.+     +|++ |++++|+....         .. ...++.++.+|++|++++.+++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~-----~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~  298 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLAR-----RGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELL  298 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHH-----HTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----cCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHH
Confidence            3468999999999999999999998     7885 99999976421         00 1246789999999999999999


Q ss_pred             hcC------CCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCC
Q 016047           92 SQL------TDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        92 ~~~------~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                      +.+      |.|+|+|+......      ......+++|+.|+.++.+++.+.  ++.+|+++||...      .+|.. 
T Consensus       299 ~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~------~~g~~-  369 (486)
T 2fr1_A          299 GGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFAS------AFGAP-  369 (486)
T ss_dssp             HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHH------HTCCT-
T ss_pred             HHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHh------cCCCC-
Confidence            876      66889887533211      134567789999999999999875  3677777765322      23310 


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHHHHHHHh---hcCCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLEDILFEEV---EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~---~~~~~~~~~ilRp~~v~G  207 (396)
                                   .  ...|+..|...+.+   .+..|+++++++|+.+.+
T Consensus       370 -------------g--~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~  405 (486)
T 2fr1_A          370 -------------G--LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAG  405 (486)
T ss_dssp             -------------T--CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-
T ss_pred             -------------C--CHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCC
Confidence                         0  11255433332211   135689999999999887

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.37  E-value=3.6e-12  Score=125.63  Aligned_cols=157  Identities=15%  Similarity=0.084  Sum_probs=109.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC---------C-CCCCCeeEEEecCCChHHHHHHH
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ..+++||||||+|+||.+++++|.+     +|+ +|++++|+....         . ....++.++.+|++|++++.+++
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~-----~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~  331 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAA-----EGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALV  331 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHH-----TTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHh-----CCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHH
Confidence            3468999999999999999999998     788 589899975321         0 01235789999999999999998


Q ss_pred             hc--CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCC
Q 016047           92 SQ--LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        92 ~~--~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                      +.  +|.|+|+|+......      ......+++|+.|+.++.+++... ..+.+|+++||..      +.+|.      
T Consensus       332 ~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a------~~~g~------  398 (511)
T 2z5l_A          332 TAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVT------GTWGN------  398 (511)
T ss_dssp             HHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGG------GTTCC------
T ss_pred             hcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHH------hcCCC------
Confidence            76  888999988543211      134567899999999999988764 1366777766432      12331      


Q ss_pred             CccCCCCCCCCCCcchhHHHHHHHHh---hcCCCeeEEEEcCCceee
Q 016047          164 PFTEDMPRLDAPNFYYTLEDILFEEV---EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~~l~~~~---~~~~~~~~~ilRp~~v~G  207 (396)
                               + ....|+..|...+.+   .+..|+++++++|+.+.+
T Consensus       399 ---------~-g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~  435 (511)
T 2z5l_A          399 ---------A-GQGAYAAANAALDALAERRRAAGLPATSVAWGLWGG  435 (511)
T ss_dssp             ---------T-TBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCS
T ss_pred             ---------C-CCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccC
Confidence                     0 112366533332222   146789999999988743

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.37  E-value=7e-12  Score=114.02  Aligned_cols=116  Identities=14%  Similarity=0.106  Sum_probs=87.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--------------CCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------------ADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------------~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      .+|++|||||+|.||.+++++|++     +|++|++++|+......              ...++.++.+|++|++++++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAAR-----DGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            458999999999999999999999     89999999998643100              02357789999999998877


Q ss_pred             HHh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           90 KLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        90 ~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      +++       .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS  149 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAP  149 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECC
Confidence            665       5788999987543221      134667899999999999987653  122457777664

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.37  E-value=4.8e-12  Score=113.21  Aligned_cols=116  Identities=11%  Similarity=0.076  Sum_probs=85.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecC--CChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDV--SDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl--~d~~~~~~~~~-   92 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|+....        .....++.++.+|+  ++.+++.++++ 
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAA-----HGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-----CCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321        00114567788887  88887766554 


Q ss_pred             ------cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 ------QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                            .+|.++|+|+......       ++....+++|+.|+.++++++...  ..+..+++++||
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS  154 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSS  154 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECC
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence                  5788999987532211       145667899999999999988533  123467777764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.36  E-value=2e-11  Score=114.61  Aligned_cols=115  Identities=13%  Similarity=0.072  Sum_probs=88.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--------------CCCCeeEEEecCCChHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--------------ADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--------------~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      +|+||||||+|.||.+++++|++     +|++|++++|+......              ...++.++.+|++|+++++++
T Consensus        45 gk~vlVTGas~GIG~aia~~La~-----~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAK-----DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHH-----CCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            58999999999999999999999     89999999998653210              123677899999999988777


Q ss_pred             Hh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           91 LS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        91 ~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      ++       .+|.|+|+|+......      +.....+++|+.|+.++++++...  ..+..+|+++||
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS  188 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISP  188 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence            65       6788999987533211      134667899999999999988544  123467787764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.36  E-value=2e-12  Score=116.01  Aligned_cols=156  Identities=14%  Similarity=0.115  Sum_probs=104.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....          .....++.++.+|++|.++++++++ 
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLAT-----DGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHH-----HTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            458999999999999999999999     899999999975321          0011467899999999988877665 


Q ss_pred             ------cCCCeeEEEEeccCCC-c----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047           93 ------QLTDVTHIFYVTWTNR-S----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~-~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                            .+|.++|+|+...... +    +....+++|+.|+.++++++...  ..+..+++++||...+      ++.  
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~------~~~--  152 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAK------YGF--  152 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhc------CCC--
Confidence                  4677888887532211 1    34667899999999999987543  1123567766643211      110  


Q ss_pred             CCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                  .+  ...|+..|.        +...+ ...|+++..++|+.|..
T Consensus       153 ------------~~--~~~Y~asKaa~~~l~~~la~e~-~~~gi~vn~v~PG~v~T  193 (250)
T 3nyw_A          153 ------------AD--GGIYGSTKFALLGLAESLYREL-APLGIRVTTLCPGWVNT  193 (250)
T ss_dssp             ------------CC--TTHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBCS
T ss_pred             ------------CC--CcchHHHHHHHHHHHHHHHHHh-hhcCcEEEEEecCcccC
Confidence                        01  122664332        22222 34589999999998866

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.36  E-value=2e-12  Score=117.26  Aligned_cols=115  Identities=10%  Similarity=0.038  Sum_probs=85.1

Q ss_pred             CCCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|+||||||  +|+||.+++++|++     +|++|++++|+....     .....++.++.+|++|+++++++++    
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQE-----QGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHH-----TTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHH-----CCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHH
Confidence            3589999999  99999999999999     899999999976321     0012357899999999998877766    


Q ss_pred             ------cCCCeeEEEEeccC------C-----CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           93 ------QLTDVTHIFYVTWT------N-----RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~------~-----~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                            .+|.++|+|+....      .     .++....+++|+.|+.++++++.+.-.+-.+++++|
T Consensus        81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  148 (269)
T 2h7i_A           81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD  148 (269)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence                  67778888875331      1     113456789999999999999876421113566555

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.36  E-value=1.5e-12  Score=121.51  Aligned_cols=157  Identities=17%  Similarity=0.092  Sum_probs=105.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-----------CCCCCeeEEEecCCChHHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-----------NADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-----------~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      +|+||||||+|+||.+++++|++     +|++|+++.|.....  .           ....++.++.+|++|++++++++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~-----~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   76 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLAS-----DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAAR   76 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHT-----CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHH
Confidence            46899999999999999999999     899988888753221  0           01246889999999999999988


Q ss_pred             hc-----CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047           92 SQ-----LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        92 ~~-----~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                      +.     +|.++|+|+.....      .++....+++|+.|+.++++++...  ..+..+|+++||...+.      +  
T Consensus        77 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~------~--  148 (327)
T 1jtv_A           77 ERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM------G--  148 (327)
T ss_dssp             HTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS------C--
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc------C--
Confidence            76     67788888743221      1135678899999999999986432  11246777776432221      1  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhHHHH-----HHHHh--hcCCCeeEEEEcCCceeec
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEV--EKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~--~~~~~~~~~ilRp~~v~G~  208 (396)
                          .         + ....|+..|.     .....  ....|+++++++|+.|..+
T Consensus       149 ----~---------~-~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~  191 (327)
T 1jtv_A          149 ----L---------P-FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA  191 (327)
T ss_dssp             ----C---------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             ----C---------C-CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccCh
Confidence                0         1 1122664332     22221  1346899999999998873

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.35  E-value=7e-12  Score=113.51  Aligned_cols=116  Identities=9%  Similarity=-0.030  Sum_probs=85.9

Q ss_pred             CCCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .+|+||||||+  |.||.+++++|++     .|++|++++|+....       .  ....++.++.+|++|+++++++++
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~-----~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAE-----MGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHH-----TSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            45899999999  8999999999999     899999999875432       0  012468889999999998877765


Q ss_pred             c-------CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 Q-------LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ~-------~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      .       +|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+++++||
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS  160 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITAS  160 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcc
Confidence            4       577899887543221      145668899999999999988433  112346666654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.32  E-value=2.3e-12  Score=117.65  Aligned_cols=156  Identities=16%  Similarity=0.095  Sum_probs=104.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....      .  .....+.++.+|++|+++++++++   
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  106 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSA-----EGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVR  106 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      0  001235889999999998877665   


Q ss_pred             ----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceeeccccccccc
Q 016047           93 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                          .+|.++|+|+......       ++....+++|+.|+.++++++...    +.+-.+++++||...+      .+ 
T Consensus       107 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~------~~-  179 (281)
T 4dry_A          107 AEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQ------TP-  179 (281)
T ss_dssp             HHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGT------CC-
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhC------CC-
Confidence                4588999987543211       145668899999988888877654    1123567776642211      00 


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                   . + ....|+..|.        +...+ ...|+++..++|+.|..
T Consensus       180 -------------~-~-~~~~Y~asKaa~~~l~~~la~e~-~~~gI~vn~v~PG~v~T  221 (281)
T 4dry_A          180 -------------R-P-NSAPYTATKHAITGLTKSTALDG-RMHDIACGQIDIGNAAT  221 (281)
T ss_dssp             -------------C-T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEEECBCC
T ss_pred             -------------C-C-CChhHHHHHHHHHHHHHHHHHHh-cccCeEEEEEEECcCcC
Confidence                         0 1 1122654322        22222 35689999999998877

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.31  E-value=3e-12  Score=117.57  Aligned_cols=157  Identities=15%  Similarity=0.061  Sum_probs=106.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCC------C--CCCCCeeEEEecCCChH---------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W--NADHLVEYVQCDVSDPE---------   85 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~------~--~~~~~v~~~~~Dl~d~~---------   85 (396)
                      .+|++|||||+|.||.+++++|++     +|++|++++ |+....      .  ....++.++.+|++|++         
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~-----~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHA-----EGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             CCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            357999999999999999999999     899999999 764211      0  01246889999999998         


Q ss_pred             --------HHHHHHh-------cCCCeeEEEEeccCC--------------------CccHHHHHHhHHHHHHHHHHHHc
Q 016047           86 --------ETQAKLS-------QLTDVTHIFYVTWTN--------------------RSTEAENCKINGSMFRNVLRAVI  130 (396)
Q Consensus        86 --------~~~~~~~-------~~~~V~h~a~~~~~~--------------------~~~~~~~~~~nv~gt~~ll~a~~  130 (396)
                              ++.++++       .+|.++|+|+.....                    .+.....+++|+.|+.++++++.
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                    8877665       578899998753221                    11234578999999999999876


Q ss_pred             cc--CCC------cceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH--------HHHHhhcCCC
Q 016047          131 PN--APN------LRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEE  194 (396)
Q Consensus       131 ~~--~~~------~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~  194 (396)
                      ..  ..+      ..+++++||...+       .       +       .+ ....|+..|.        +...+ ...|
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~-------~-------~-------~~-~~~~Y~asKaa~~~l~~~la~e~-~~~g  219 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTN-------Q-------P-------LL-GYTIYTMAKGALEGLTRSAALEL-APLQ  219 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTT-------S-------C-------CT-TCHHHHHHHHHHHHHHHHHHHHH-GGGT
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhc-------C-------C-------CC-CCchhHHHHHHHHHHHHHHHHHH-HhcC
Confidence            53  112      3677777643211       1       0       01 1123654322        22222 3468


Q ss_pred             eeEEEEcCCceeec
Q 016047          195 LSWSVHRPDTIFGF  208 (396)
Q Consensus       195 ~~~~ilRp~~v~G~  208 (396)
                      +++..++|+.|..+
T Consensus       220 I~vn~v~PG~v~T~  233 (291)
T 1e7w_A          220 IRVNGVGPGLSVLV  233 (291)
T ss_dssp             EEEEEEEESSBCCG
T ss_pred             eEEEEEeeCCccCC
Confidence            99999999998763

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.31  E-value=5.5e-12  Score=113.78  Aligned_cols=156  Identities=14%  Similarity=0.050  Sum_probs=101.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CC-CCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WN-ADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~-~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....      .. ...++.++.+|++|+++++++++.   
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCK-----AGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDR   78 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            358999999999999999999999     899999999975321      00 013578899999999887765543   


Q ss_pred             -----CCCeeEEEE--ec------c-C----CCccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccc
Q 016047           94 -----LTDVTHIFY--VT------W-T----NRSTEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFE  153 (396)
Q Consensus        94 -----~~~V~h~a~--~~------~-~----~~~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~  153 (396)
                           +|.++|+|+  ..      . .    ..+.....+++|+.++.++.+++...  ..+..+++++||...+     
T Consensus        79 ~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----  153 (260)
T 2qq5_A           79 EQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSL-----  153 (260)
T ss_dssp             HHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGT-----
T ss_pred             hcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhc-----
Confidence                 577888873  11      0 0    11245677889999987777665432  1124567777643211     


Q ss_pred             ccccCCCCCCCccCCCCCCCCCCcchhHHHHH-----HHHh--hcCCCeeEEEEcCCceee
Q 016047          154 AFGKIKPYDPPFTEDMPRLDAPNFYYTLEDIL-----FEEV--EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       154 ~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l-----~~~~--~~~~~~~~~ilRp~~v~G  207 (396)
                        .     .         .+  ...|+..|..     ....  ....|+++.+++|+.|..
T Consensus       154 --~-----~---------~~--~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T  196 (260)
T 2qq5_A          154 --Q-----Y---------MF--NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQT  196 (260)
T ss_dssp             --S-----C---------CS--SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCT
T ss_pred             --C-----C---------CC--CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCcccc
Confidence              1     0         01  1236643222     2111  134689999999999887

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.31  E-value=1.3e-12  Score=117.56  Aligned_cols=154  Identities=12%  Similarity=-0.009  Sum_probs=96.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC------CCCCeeEEEecCCChHHHH----HHHhcCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN------ADHLVEYVQCDVSDPEETQ----AKLSQLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~------~~~~v~~~~~Dl~d~~~~~----~~~~~~~   95 (396)
                      |+||||||+|+||.+++++|++     +|++|++++|+......      ...++..+  |..+.+.+.    +.+..+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSE-----AGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHH-----TTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999     89999999997543100      01122232  554443322    2234688


Q ss_pred             CeeEEEEec-cCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           96 DVTHIFYVT-WTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        96 ~V~h~a~~~-~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      .++|+|+.. ....      ++....+++|+.|+.++++++...  ..+..+++++||...+.      +      .   
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------~------~---  139 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG------P------W---  139 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS------C------C---
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc------C------C---
Confidence            899998854 2111      134667899999999999887543  11235677776432111      0      0   


Q ss_pred             CCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceeecC
Q 016047          167 EDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFGFS  209 (396)
Q Consensus       167 E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G~~  209 (396)
                            + ....|+..|.     .   .... ...|+++.+++|+.|+|+.
T Consensus       140 ------~-~~~~Y~~sK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~~~~  182 (254)
T 1zmt_A          140 ------K-ELSTYTSARAGACTLANALSKEL-GEYNIPVFAIGPNYLHSED  182 (254)
T ss_dssp             ------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTCCEEEEEESSBCCBT
T ss_pred             ------C-CchHHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEecCcccccc
Confidence                  1 1123654322     2   2222 3458999999999998843

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.31  E-value=3.6e-11  Score=106.91  Aligned_cols=204  Identities=11%  Similarity=0.039  Sum_probs=125.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      |+|+||||||++-||.+++++|.+     .|++|++++|+....   .....++..+++|++|+++++++++       .
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~-----~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLE-----AGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999     899999999975321   1123578899999999987766543       4


Q ss_pred             CCCeeEEEEeccCC------CccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           94 LTDVTHIFYVTWTN------RSTEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        94 ~~~V~h~a~~~~~~------~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      +|.++|.|+.....      .++.+..+++|+.|+..+.+++.+. ..+--+++.+||...+      .+          
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~------~~----------  139 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAF------QS----------  139 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGT------SC----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccc------cC----------
Confidence            67777877643221      1146778899999999888877654 1111456655532111      00          


Q ss_pred             CCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecC
Q 016047          167 EDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPG  238 (396)
Q Consensus       167 E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g  238 (396)
                           .|. ...|+.        .+.+...+ . .++++-.+-|+.|--+.....   ....      .  ...|+.-  
T Consensus       140 -----~~~-~~~Y~asKaal~~ltk~lA~el-a-~~IrVN~I~PG~i~t~~~~~~---~~~~------~--~~~Pl~R--  198 (247)
T 3ged_A          140 -----EPD-SEAYASAKGGIVALTHALAMSL-G-PDVLVNCIAPGWINVTEQQEF---TQED------C--AAIPAGK--  198 (247)
T ss_dssp             -----CTT-CHHHHHHHHHHHHHHHHHHHHH-T-TTSEEEEEEECSBCCCC---C---CHHH------H--HTSTTSS--
T ss_pred             -----CCC-CHHHHHHHHHHHHHHHHHHHHH-C-CCCEEEEEecCcCCCCCcHHH---HHHH------H--hcCCCCC--
Confidence                 011 112553        44444444 3 379999999998855211111   1111      0  1222111  


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCC
Q 016047          239 TKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGD  279 (396)
Q Consensus       239 ~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~  279 (396)
                                +....++|.++++++.+...-|+++.+.+|-
T Consensus       199 ----------~g~pediA~~v~fL~s~~~iTG~~i~VDGG~  229 (247)
T 3ged_A          199 ----------VGTPKDISNMVLFLCQQDFITGETIIVDGGM  229 (247)
T ss_dssp             ----------CBCHHHHHHHHHHHHHCSSCCSCEEEESTTG
T ss_pred             ----------CcCHHHHHHHHHHHHhCCCCCCCeEEECcCH
Confidence                      1233455777777776544457888876653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.30  E-value=7.3e-12  Score=121.75  Aligned_cols=156  Identities=12%  Similarity=0.050  Sum_probs=108.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .++++|||||+|.||.+++++|.+     +|++|++++|+....    .....++.++.+|++|.++++++++       
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~-----~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFAR-----DGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHH-----CCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            458999999999999999999998     899999999864221    0011246789999999988777664       


Q ss_pred             -cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEeccceeecccccccccCCCCCC
Q 016047           93 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTGTKHYLGPFEAFGKIKPYDP  163 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~  163 (396)
                       .+|.|+|+|+......      +.....+++|+.|+.++.+++....  .+..+|+++||...+      .|.      
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~------~g~------  354 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGI------AGN------  354 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHH------HCC------
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhC------CCC------
Confidence             2778999987543221      1346678999999999999887651  135677777653322      111      


Q ss_pred             CccCCCCCCCCCCcchhHHHH--------HHHHhhcCCCeeEEEEcCCceee
Q 016047          164 PFTEDMPRLDAPNFYYTLEDI--------LFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       164 p~~E~~p~~~~~~~~y~~e~~--------l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                               + ....|+..|.        +.... ...|+++.++.|+.|..
T Consensus       355 ---------~-g~~~YaasKaal~~l~~~la~e~-~~~gI~vn~v~PG~v~T  395 (454)
T 3u0b_A          355 ---------R-GQTNYATTKAGMIGLAEALAPVL-ADKGITINAVAPGFIET  395 (454)
T ss_dssp             ---------T-TCHHHHHHHHHHHHHHHHHHHHH-HTTTCEEEEEEECSBCC
T ss_pred             ---------C-CCHHHHHHHHHHHHHHHHHHHHh-hhcCcEEEEEEcCcccC
Confidence                     1 1122664333        22222 45689999999999977

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.30  E-value=5.8e-12  Score=114.99  Aligned_cols=116  Identities=13%  Similarity=0.073  Sum_probs=84.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|++|||||+|+||.+++++|++     +|++|++++|+....    .....++.++.+|++|+++++++++       
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVA-----EGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            358999999999999999999999     899999999975321    0012468899999999988776665       


Q ss_pred             cCCCeeEEEEeccCCC-------c----cHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEecc
Q 016047           93 QLTDVTHIFYVTWTNR-------S----TEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTG  144 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~-------~----~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~  144 (396)
                      .+|.++|+|+......       +    .....+++|+.|+.++++++.... .+-.+++++||
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS  142 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTIS  142 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEec
Confidence            4577888887532111       1    245578899999999999886541 11135666654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.29  E-value=9.4e-12  Score=121.83  Aligned_cols=157  Identities=18%  Similarity=0.133  Sum_probs=108.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC----------CCCCCeeEEEecCCChHHHHHH
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW----------NADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~----------~~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      +.|++++|||||+|.||.+++++|.+     +|+ .|+++.|+.....          ....++.++.+|++|++++.++
T Consensus       236 ~~~~~~vLITGgsgGIG~alA~~La~-----~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~  310 (496)
T 3mje_A          236 PPVHGSVLVTGGTGGIGGRVARRLAE-----QGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAAL  310 (496)
T ss_dssp             CCCCSEEEEETCSSHHHHHHHHHHHH-----TTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEECCCCchHHHHHHHHHH-----CCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            34568999999999999999999998     788 6888888643210          0124678999999999999998


Q ss_pred             Hhc------CCCeeEEEEeccCCC-----c--cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccccccc
Q 016047           91 LSQ------LTDVTHIFYVTWTNR-----S--TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        91 ~~~------~~~V~h~a~~~~~~~-----~--~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                      ++.      +|.|+|+|+......     +  .....+++|+.|+.++.+++....  ..+|+++||...      .+|.
T Consensus       311 ~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~--~~~iV~~SS~a~------~~g~  382 (496)
T 3mje_A          311 LAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD--LDAFVLFSSGAA------VWGS  382 (496)
T ss_dssp             HHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC--CSEEEEEEEHHH------HTTC
T ss_pred             HHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC--CCEEEEEeChHh------cCCC
Confidence            875      455888877541111     1  346678999999999999998753  567776664321      2221


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHHHHHHHh---hcCCCeeEEEEcCCceee
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLEDILFEEV---EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~---~~~~~~~~~ilRp~~v~G  207 (396)
                                     + ....|+..|...+.+   .+..|++++++.|+.+.+
T Consensus       383 ---------------~-g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~  419 (496)
T 3mje_A          383 ---------------G-GQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGE  419 (496)
T ss_dssp             ---------------T-TCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESS
T ss_pred             ---------------C-CcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccC
Confidence                           1 112266533332222   145689999999998876

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.29  E-value=2.6e-12  Score=114.83  Aligned_cols=155  Identities=17%  Similarity=0.166  Sum_probs=91.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHH---HH---HhcCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQ---AK---LSQLTD   96 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~---~~---~~~~~~   96 (396)
                      +|+||||||+|+||.+++++|.+      |+.|++++|++...  .....++.++.+|+.+.+...   +.   +..+|.
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~------g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   78 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR------DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDT   78 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT------TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC------CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCE
Confidence            57999999999999999999975      67899999975321  011246889999998875421   11   225677


Q ss_pred             eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                      ++|+|+......      ++....+++|+.|+.++++++...- .+-.+++++||...+       ..     .      
T Consensus        79 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~-------~~-----~------  140 (245)
T 3e9n_A           79 LVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGN-------GP-----H------  140 (245)
T ss_dssp             EEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC--------------------------
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccc-------cC-----C------
Confidence            899887543221      1345678999999888888775430 001456666643222       10     0      


Q ss_pred             CCCCCCCcchhHHHH-----HHHHhh--cCCCeeEEEEcCCceee
Q 016047          170 PRLDAPNFYYTLEDI-----LFEEVE--KKEELSWSVHRPDTIFG  207 (396)
Q Consensus       170 p~~~~~~~~y~~e~~-----l~~~~~--~~~~~~~~ilRp~~v~G  207 (396)
                         + ....|+..|.     ...+..  ...|+++.+++|+.|.+
T Consensus       141 ---~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  181 (245)
T 3e9n_A          141 ---P-GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNT  181 (245)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--
T ss_pred             ---C-CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccC
Confidence               1 1122664322     222211  34689999999999988

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.29  E-value=3.3e-10  Score=100.05  Aligned_cols=156  Identities=12%  Similarity=0.026  Sum_probs=107.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhc---CCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQ---LTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~V~h   99 (396)
                      .+|++|||||++-||..++++|.+     .|++|++++|+.+... ....++..+.+|++|+++++++++.   +|.++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~-----~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN   84 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAE-----LGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVN   84 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            479999999999999999999999     8999999999865431 2335788999999999988877765   455666


Q ss_pred             EEEeccCCC----ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047          100 IFYVTWTNR----STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus       100 ~a~~~~~~~----~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      .|+......    ++++..+++|+.|+..+.+++...- .+--+++.+||.         .|..     +       .+.
T Consensus        85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~---------~~~~-----~-------~~~  143 (242)
T 4b79_A           85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM---------YSTF-----G-------SAD  143 (242)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG---------GGTS-----C-------CSS
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec---------cccC-----C-------CCC
Confidence            665432211    1456788999999998888776541 112456666532         2210     0       011


Q ss_pred             CCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          175 PNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       175 ~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                       ...|+.        .|.+...+ ...|+++-.+-|+.|--
T Consensus       144 -~~~Y~asKaav~~ltr~lA~El-a~~gIrVNaV~PG~i~T  182 (242)
T 4b79_A          144 -RPAYSASKGAIVQLTRSLACEY-AAERIRVNAIAPGWIDT  182 (242)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHh-hhcCeEEEEEEeCCCCC
Confidence             112553        44444444 46789999999998876

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.26  E-value=3.1e-11  Score=108.75  Aligned_cols=119  Identities=14%  Similarity=0.016  Sum_probs=84.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C---CCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W---NADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~---~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      +|++|||||+|+||.+++++|++...  .|++|++++|+....      .   ....++.++.+|++|+++++++++.  
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLS--PGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBC--TTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhc--CCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            57899999999999999999986100  389999999975321      0   0024678999999999887766543  


Q ss_pred             -------CC--CeeEEEEeccCC-------C--ccHHHHHHhHHHHHHHHHHHHcccCC----CcceEEEeccc
Q 016047           94 -------LT--DVTHIFYVTWTN-------R--STEAENCKINGSMFRNVLRAVIPNAP----NLRHVCLQTGT  145 (396)
Q Consensus        94 -------~~--~V~h~a~~~~~~-------~--~~~~~~~~~nv~gt~~ll~a~~~~~~----~~~~~~~~s~~  145 (396)
                             +|  .++|+|+.....       .  ++....+++|+.|+.++++++...-.    +..+++++||.
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~  157 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSL  157 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCG
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCc
Confidence                   46  788888753210       1  24566789999999999998876521    23567777643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.20  E-value=1e-10  Score=105.21  Aligned_cols=154  Identities=16%  Similarity=0.079  Sum_probs=103.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------cCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------QLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~~   96 (396)
                      .+|++|||||++-||.+++++|.+     .|++|++.+|+.....   ....++++|++|+++++++++       .+|.
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLE-----LGAQVLTTARARPEGL---PEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHH-----TTCEEEEEESSCCTTS---CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHH-----cCCEEEEEECCchhCC---CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            358999999999999999999999     8999999999755432   334578999999987766554       3677


Q ss_pred             eeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           97 VTHIFYVTWTNR--------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        97 V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      ++|+|+......        ++.+..+++|+.|+.++.+++...  ..+-.+++.+||..         +.     .+  
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~---------~~-----~~--  145 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQ---------RV-----LP--  145 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG---------GT-----SC--
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehh---------hc-----cC--
Confidence            788776422111        145677899999998888877654  11234566655321         11     00  


Q ss_pred             CCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          167 EDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       167 E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                           .|....+|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       146 -----~~~~~~~Y~asKaal~~lt~~lA~El-a~~gIrVN~V~PG~i~T  188 (261)
T 4h15_A          146 -----LPESTTAYAAAKAALSTYSKAMSKEV-SPKGVRVVRVSPGWIET  188 (261)
T ss_dssp             -----CTTTCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCC
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHHHh-hhhCeEEEEEeCCCcCC
Confidence                 0111234653        34444433 46789999999988765

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.18  E-value=1.4e-10  Score=114.67  Aligned_cols=156  Identities=12%  Similarity=0.086  Sum_probs=106.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEE-eCCCCC----------C--C--------CCCCCeeEEEec
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGV-ARRPKP----------N--W--------NADHLVEYVQCD   80 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l-~R~~~~----------~--~--------~~~~~v~~~~~D   80 (396)
                      ..++++|||||+|.||.+++++|.+     +|++ |+++ +|++..          .  .        ....++.++.+|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~-----~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~D  323 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLAR-----DGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCD  323 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHH-----HTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECC
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHH-----cCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECC
Confidence            3568999999999999999999998     7887 5655 777422          0  0        002357899999


Q ss_pred             CCChHHHHHHHhcC------CCeeEEEEeccCC----Cc--cHHHHHHhHHHHHHHHHHHHcccCCC---cceEEEeccc
Q 016047           81 VSDPEETQAKLSQL------TDVTHIFYVTWTN----RS--TEAENCKINGSMFRNVLRAVIPNAPN---LRHVCLQTGT  145 (396)
Q Consensus        81 l~d~~~~~~~~~~~------~~V~h~a~~~~~~----~~--~~~~~~~~nv~gt~~ll~a~~~~~~~---~~~~~~~s~~  145 (396)
                      ++|++++.++++.+      |.|+|+|+.....    .+  .....+++|+.|+.++.+++.....+   ..+|+++||.
T Consensus       324 vtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~  403 (525)
T 3qp9_A          324 LTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSV  403 (525)
T ss_dssp             TTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEG
T ss_pred             CCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCH
Confidence            99999999988764      5688887753321    11  34667899999999999998875311   5677776643


Q ss_pred             eeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHHHHHHhh---cCCCeeEEEEcCCce
Q 016047          146 KHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDILFEEVE---KKEELSWSVHRPDTI  205 (396)
Q Consensus       146 ~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~~---~~~~~~~~ilRp~~v  205 (396)
                      ..      .+|.               + ....|+..|...+.++   +..|++++++.|+.+
T Consensus       404 a~------~~g~---------------~-g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~  444 (525)
T 3qp9_A          404 AA------IWGG---------------A-GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW  444 (525)
T ss_dssp             GG------TTCC---------------T-TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred             HH------cCCC---------------C-CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence            21      2221               1 1123776555444332   355799999999988

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.18  E-value=1.9e-10  Score=102.65  Aligned_cols=157  Identities=15%  Similarity=0.043  Sum_probs=106.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      ..+|.+|||||++-||..++++|.+     +|.+|++++|+.+..      . ....++..+++|++|+++++++++   
T Consensus         5 L~gKvalVTGas~GIG~aiA~~la~-----~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   79 (254)
T 4fn4_A            5 LKNKVVIVTGAGSGIGRAIAKKFAL-----NDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTF   79 (254)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3568999999999999999999998     899999999975321      0 012467889999999988766554   


Q ss_pred             ----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047           93 ----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                          .+|.++|.|+......       ++.+..+++|+.|+.++.+++.+.  ..+--+++.+||..         |.. 
T Consensus        80 ~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~---------g~~-  149 (254)
T 4fn4_A           80 ETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIA---------GIR-  149 (254)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG---------GTC-
T ss_pred             HHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechh---------hcC-
Confidence                4677888877432111       145678899999998888877664  11234566665422         210 


Q ss_pred             CCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                          +       .+. ...|+.        .+.+...+ ...|+++-.+-|+.|--
T Consensus       150 ----~-------~~~-~~~Y~asKaal~~ltr~lA~el-a~~gIrVN~V~PG~i~T  192 (254)
T 4fn4_A          150 ----G-------GFA-GAPYTVAKHGLIGLTRSIAAHY-GDQGIRAVAVLPGTVKT  192 (254)
T ss_dssp             ----S-------SSS-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS
T ss_pred             ----C-------CCC-ChHHHHHHHHHHHHHHHHHHHh-hhhCeEEEEEEeCCCCC
Confidence                0       011 112553        45555444 56789999999998865

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.12  E-value=8.5e-10  Score=99.43  Aligned_cols=155  Identities=14%  Similarity=0.035  Sum_probs=104.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHhc-------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLSQ-------   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~~-------   93 (396)
                      +|.+|||||++-||..++++|.+     +|++|++++|+.+...    ....++..+++|++|+++++++++.       
T Consensus        29 gKvalVTGas~GIG~aiA~~la~-----~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~  103 (273)
T 4fgs_A           29 AKIAVITGATSGIGLAAAKRFVA-----EGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGR  103 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999     8999999999753210    0124677899999999887765543       


Q ss_pred             CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           94 LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                      +|.+++.|+......      ++++..+++|+.|+.++.+++...-.+-..++.++|.         .|..   ..    
T Consensus       104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~---------~~~~---~~----  167 (273)
T 4fgs_A          104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST---------AGST---GT----  167 (273)
T ss_dssp             EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG---------GGGS---CC----
T ss_pred             CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh---------hhcc---CC----
Confidence            455667766422111      1467789999999999999887652222345555432         1210   00    


Q ss_pred             CCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          168 DMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       168 ~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                           |. ...|+.        .+.+...+ ...|+++-.+-|+.|--
T Consensus       168 -----~~-~~~Y~asKaav~~ltr~lA~El-a~~gIrVN~V~PG~i~T  208 (273)
T 4fgs_A          168 -----PA-FSVYAASKAALRSFARNWILDL-KDRGIRINTLSPGPTET  208 (273)
T ss_dssp             -----TT-CHHHHHHHHHHHHHHHHHHHHT-TTSCEEEEEEEECSBCC
T ss_pred             -----CC-chHHHHHHHHHHHHHHHHHHHh-cccCeEEEEEeeCCCCC
Confidence                 11 112553        34444443 56789999999998866

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.11  E-value=4.5e-12  Score=113.28  Aligned_cols=152  Identities=13%  Similarity=0.084  Sum_probs=92.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-e--CCCCCCC--CC-CCCeeEEEecCCChHHH-HHHH---hcCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-A--RRPKPNW--NA-DHLVEYVQCDVSDPEET-QAKL---SQLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~--R~~~~~~--~~-~~~v~~~~~Dl~d~~~~-~~~~---~~~~   95 (396)
                      |++|||||+|+||.+++++|++     +|++|+++ +  |++....  .. ..+.++.  |..+.+.+ +++.   ..+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~-----~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQ-----DGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAID   74 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHH-----TTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHH-----CCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999     89999999 6  8643210  00 0122222  43333322 2222   2467


Q ss_pred             CeeEEEEeccC---CC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           96 DVTHIFYVTWT---NR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        96 ~V~h~a~~~~~---~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .++|+|+....   ..      ++....+++|+.|+.++++++...  ..+..+++++||...+       ..     . 
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~-------~~-----~-  141 (244)
T 1zmo_A           75 TIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGK-------KP-----L-  141 (244)
T ss_dssp             EEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT-------SC-----C-
T ss_pred             EEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhC-------CC-----C-
Confidence            78888875322   11      134667899999999999887643  1124677777643222       10     0 


Q ss_pred             ccCCCCCCCCCCcchhHHHH-----H---HHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTLEDI-----L---FEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~e~~-----l---~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                              +. ...|+..|.     .   .... ...|+++.+++|+.|-.
T Consensus       142 --------~~-~~~Y~asK~a~~~~~~~la~e~-~~~gi~v~~v~PG~v~T  182 (244)
T 1zmo_A          142 --------AY-NPLYGPARAATVALVESAAKTL-SRDGILLYAIGPNFFNN  182 (244)
T ss_dssp             --------TT-CTTHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESSBCB
T ss_pred             --------CC-chHHHHHHHHHHHHHHHHHHHH-hhcCcEEEEEeeCCCcC
Confidence                    10 112654322     2   2222 34589999999998876

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.09  E-value=2.1e-09  Score=96.49  Aligned_cols=157  Identities=13%  Similarity=0.045  Sum_probs=103.5

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      .+|++|||||+|  -||..++++|.+     .|++|++.+|+....        .....++.++++|++|+++++++++ 
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~-----~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQ-----LGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999987  799999999999     899999999975321        1122467899999999987766554 


Q ss_pred             ------cCCCeeEEEEeccCC---C---c----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccc
Q 016047           93 ------QLTDVTHIFYVTWTN---R---S----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~---~---~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                            .+|.++|.|+.....   .   +    +....+++|+.++..+..++....++--+++.+||.         .|
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~---------~~  150 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL---------GG  150 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG---------GG
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc---------cc
Confidence                  467788877643211   0   1    223456889999888887776653333566666532         11


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                      .     .+       .|. ...|+.        .+.+...+ ...|+++-.+.|+.|--+
T Consensus       151 ~-----~~-------~~~-~~~Y~asKaal~~ltr~lA~El-a~~gIrVN~V~PG~i~T~  196 (256)
T 4fs3_A          151 E-----FA-------VQN-YNVMGVAKASLEANVKYLALDL-GPDNIRVNAISAGPIRTL  196 (256)
T ss_dssp             T-----SC-------CTT-THHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCCCSG
T ss_pred             c-----cC-------ccc-chhhHHHHHHHHHHHHHHHHHh-CccCeEEEEEecCCCCCh
Confidence            1     00       011 112553        34444433 467899999999988763

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.07  E-value=5.5e-10  Score=103.67  Aligned_cols=115  Identities=11%  Similarity=-0.033  Sum_probs=78.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----C---------CCCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----W---------NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~---------~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      .+|+||||||+|+||.+++++|++     +|++|++++|.....     .         ..... ....+|+.+.+++++
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~-----~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~-~~~~~D~~~~~~~~~   81 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAE-----RGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-GKAVANYDSVEAGEK   81 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-CEEEEECCCGGGHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC-CeEEEeCCCHHHHHH
Confidence            358999999999999999999999     899999987642100     0         00001 134689999876555


Q ss_pred             HHh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           90 KLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        90 ~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      +++       .+|.++|+|+......      +.....+++|+.|+.++++++...  ..+..+|+++||
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS  151 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  151 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            433       5788999987533211      145667899999999988887442  112467777764

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.05  E-value=3e-10  Score=101.46  Aligned_cols=156  Identities=15%  Similarity=0.002  Sum_probs=105.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+|.+|||||++-||..++++|.+     +|++|++.+|+....      . ....++..+++|++|+++++++++.   
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~-----~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAA-----AGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0 0124678899999999887766543   


Q ss_pred             ----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCC
Q 016047           94 ----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          +|.++|+|+......      ++.+..+++|+.|+..+.+++.+.   ..+--+++.+||...+.      +    
T Consensus        83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~------~----  152 (255)
T 4g81_D           83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA------A----  152 (255)
T ss_dssp             TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------B----
T ss_pred             HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC------C----
Confidence                566777776433211      146778899999999888876543   11234667665422110      0    


Q ss_pred             CCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                 .|. ...|+.        .+.+...+ ...|+++-.+-|+.|.-
T Consensus       153 -----------~~~-~~~Y~asKaal~~ltr~lA~el-a~~gIrVN~V~PG~i~T  194 (255)
T 4g81_D          153 -----------RPT-VAPYTAAKGGIKMLTCSMAAEW-AQFNIQTNAIGPGYILT  194 (255)
T ss_dssp             -----------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             -----------CCC-chhHHHHHHHHHHHHHHHHHHh-cccCeEEEEEeeCCCCC
Confidence                       011 122542        44444444 56789999999998876

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.03  E-value=1.1e-09  Score=100.54  Aligned_cols=212  Identities=10%  Similarity=-0.025  Sum_probs=115.3

Q ss_pred             CCEEEEEcCC--ChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-----------CC--CC--CCCCC----eeEEEecC--
Q 016047           25 QSVALIVGVT--GIVGNSLAEILPLPDTPGGPWKVYGVARRP-----------KP--NW--NADHL----VEYVQCDV--   81 (396)
Q Consensus        25 ~~~iLVtGat--GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-----------~~--~~--~~~~~----v~~~~~Dl--   81 (396)
                      +|++|||||+  |+||.+++++|++     +|++|++++|++           ..  ..  .....    ...+.+|+  
T Consensus         8 ~k~~lVTGas~~~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            8 GKRAFIAGIADDNGYGWAVAKSLAA-----AGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHH-----CCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence            5799999999  9999999999999     899999987531           11  00  00001    23444432  


Q ss_pred             ------C----C--------hHHHHHHH-------hcCCCeeEEEEecc---CC---C--ccHHHHHHhHHHHHHHHHHH
Q 016047           82 ------S----D--------PEETQAKL-------SQLTDVTHIFYVTW---TN---R--STEAENCKINGSMFRNVLRA  128 (396)
Q Consensus        82 ------~----d--------~~~~~~~~-------~~~~~V~h~a~~~~---~~---~--~~~~~~~~~nv~gt~~ll~a  128 (396)
                            .    |        ++++++++       ..+|.++|+|+...   ..   .  ++....+++|+.|+.+++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                  2    1        32333333       35677888876421   11   1  14566889999999999999


Q ss_pred             HcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhHHHH-----HHHHhh--c-CCCeeEEEE
Q 016047          129 VIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTLEDI-----LFEEVE--K-KEELSWSVH  200 (396)
Q Consensus       129 ~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~e~~-----l~~~~~--~-~~~~~~~il  200 (396)
                      +...-.+-.+++++||...+      .+      .         +.....|+..|.     ......  . ..|+++..+
T Consensus       163 ~~~~m~~~g~iv~isS~~~~------~~------~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v  221 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASE------RI------I---------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTI  221 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGT------SC------C---------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred             HHHHhccCceEEEEeccccc------cC------C---------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEE
Confidence            87651112466666542211      11      0         111012664322     222111  1 258999999


Q ss_pred             cCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCC
Q 016047          201 RPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNG  278 (396)
Q Consensus       201 Rp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~  278 (396)
                      +|+.|.++..... .....+..  .+..  ..|+.         .   ..+..++|..+++++...  ...|+++++.++
T Consensus       222 ~PG~v~T~~~~~~-~~~~~~~~--~~~~--~~p~~---------r---~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          222 SAGPLGSRAAKAI-GFIDTMIE--YSYN--NAPIQ---------K---TLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             EECCCBCCCSSCC-SHHHHHHH--HHHH--HSSSC---------C---CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             eccccccchhhhc-cccHHHHH--Hhhc--cCCCC---------C---CCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            9999998422111 11111100  0111  11211         1   123455577777776532  235788998776


Q ss_pred             C
Q 016047          279 D  279 (396)
Q Consensus       279 ~  279 (396)
                      .
T Consensus       285 ~  285 (297)
T 1d7o_A          285 L  285 (297)
T ss_dssp             G
T ss_pred             c
Confidence            3

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.02  E-value=8.3e-10  Score=98.91  Aligned_cols=156  Identities=10%  Similarity=0.070  Sum_probs=105.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .+|.+|||||++-||..++++|.+     +|.+|++++|+.....      ....++.++.+|++|+++++++++     
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~-----~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAE-----ERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            358999999999999999999999     8999999999765310      012467899999999987765553     


Q ss_pred             --cCCCeeEEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                        .+|.++|.|+......     ++....+++|+.|+.++.+++.+.- .+--+++.+||...+      .+      . 
T Consensus        81 ~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~------~~------~-  147 (258)
T 4gkb_A           81 FGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAV------TG------Q-  147 (258)
T ss_dssp             HSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHH------HC------C-
T ss_pred             hCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhc------cC------C-
Confidence              4677888876432111     1456678999999998888776541 011356666543211      11      0 


Q ss_pred             ccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                              |. ...|+.        .+.+...+ ...|+++-.+-|+.|--
T Consensus       148 --------~~-~~~Y~asKaav~~ltr~lA~el-a~~gIrVN~V~PG~i~T  188 (258)
T 4gkb_A          148 --------GN-TSGYCASKGAQLALTREWAVAL-REHGVRVNAVIPAEVMT  188 (258)
T ss_dssp             --------SS-CHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCC
T ss_pred             --------CC-chHHHHHHHHHHHHHHHHHHHh-cccCeEEEEEecCCCCC
Confidence                    11 112553        44444444 56789999999998876

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.94  E-value=1.4e-09  Score=96.18  Aligned_cols=156  Identities=15%  Similarity=0.068  Sum_probs=105.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHhc--CCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLSQ--LTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~   96 (396)
                      .+|.+|||||++-||..+++.|.+     .|.+|++.+|+....     .....++..+.+|++|++++++++..  +|.
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~-----~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAA-----AGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHH-----cCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence            468999999999999999999999     899999999975321     00124678999999999877665543  666


Q ss_pred             eeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           97 VTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        97 V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                      +++.|+......      ++++..+++|+.|+..+.+++.+.   ..+--+++.+||...+      .|      .    
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~------~g------~----  146 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF------QG------G----  146 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------SC------C----
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC------CC------C----
Confidence            777776433211      146778999999999888876543   1123466766542211      11      0    


Q ss_pred             CCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          168 DMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       168 ~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                           +. ...|+.        .|.+...+ ...|+++-.+-|+.|--
T Consensus       147 -----~~-~~~Y~asKaav~~ltr~lA~El-a~~gIrVNaV~PG~i~T  187 (247)
T 4hp8_A          147 -----IR-VPSYTAAKHGVAGLTKLLANEW-AAKGINVNAIAPGYIET  187 (247)
T ss_dssp             -----SS-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS
T ss_pred             -----CC-ChHHHHHHHHHHHHHHHHHHHH-hhcCeEEEEEeeCCCCC
Confidence                 11 112553        44454444 46789999999998865

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.83  E-value=1.8e-09  Score=84.38  Aligned_cols=89  Identities=16%  Similarity=0.104  Sum_probs=69.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .|.++|+|+|+ |++|+.+++.|.+     .| ++|++++|++... .....+++++.+|+.+.+++.+++.++|.|+|+
T Consensus         3 ~~~~~v~I~G~-G~iG~~~~~~l~~-----~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   76 (118)
T 3ic5_A            3 AMRWNICVVGA-GKIGQMIAALLKT-----SSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISA   76 (118)
T ss_dssp             TTCEEEEEECC-SHHHHHHHHHHHH-----CSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHh-----CCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            35579999999 9999999999998     78 8999999976421 001246788999999999999999999999988


Q ss_pred             EEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047          101 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  133 (396)
Q Consensus       101 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  133 (396)
                      +..     .           .+.+++++|.+.+
T Consensus        77 ~~~-----~-----------~~~~~~~~~~~~g   93 (118)
T 3ic5_A           77 APF-----F-----------LTPIIAKAAKAAG   93 (118)
T ss_dssp             SCG-----G-----------GHHHHHHHHHHTT
T ss_pred             CCc-----h-----------hhHHHHHHHHHhC
Confidence            521     0           1246778887764

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.81  E-value=1.4e-08  Score=93.97  Aligned_cols=115  Identities=12%  Similarity=0.026  Sum_probs=72.5

Q ss_pred             CCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCC-----------CC-----CCCCC---CCeeEEEec---
Q 016047           25 QSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRP-----------KP-----NWNAD---HLVEYVQCD---   80 (396)
Q Consensus        25 ~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~-----------~~-----~~~~~---~~v~~~~~D---   80 (396)
                      +|++|||||  +|.||.+++++|++     .|++|++++|++           ..     .....   ..+.++.+|   
T Consensus         9 gk~~lVTGa~~s~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLAS-----AGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHT-----TTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             CCEEEEeCCCCCCChHHHHHHHHHH-----CCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            579999999  89999999999999     899999998642           00     00000   012444444   


Q ss_pred             ---------CCC--------hHHHHHHH-------hcCCCeeEEEEecc---CC---C--ccHHHHHHhHHHHHHHHHHH
Q 016047           81 ---------VSD--------PEETQAKL-------SQLTDVTHIFYVTW---TN---R--STEAENCKINGSMFRNVLRA  128 (396)
Q Consensus        81 ---------l~d--------~~~~~~~~-------~~~~~V~h~a~~~~---~~---~--~~~~~~~~~nv~gt~~ll~a  128 (396)
                               ++|        ++++++++       ..+|.++|+|+...   ..   .  ++....+++|+.|+.+++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                     332        33333333       35677888876431   11   1  13466789999999999999


Q ss_pred             HcccCCCcceEEEecc
Q 016047          129 VIPNAPNLRHVCLQTG  144 (396)
Q Consensus       129 ~~~~~~~~~~~~~~s~  144 (396)
                      +...-.+-.+++++||
T Consensus       164 ~~~~m~~~g~Iv~isS  179 (315)
T 2o2s_A          164 FGPIMNEGGSAVTLSY  179 (315)
T ss_dssp             HSTTEEEEEEEEEEEE
T ss_pred             HHHHHhcCCEEEEEec
Confidence            8764111145666654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.77  E-value=1.1e-08  Score=94.79  Aligned_cols=115  Identities=12%  Similarity=0.069  Sum_probs=72.4

Q ss_pred             CCEEEEEcC--CChhHHHHHHHcCCCCCCCCCcEEEEEeCCC----------CCCCC------------------CC---
Q 016047           25 QSVALIVGV--TGIVGNSLAEILPLPDTPGGPWKVYGVARRP----------KPNWN------------------AD---   71 (396)
Q Consensus        25 ~~~iLVtGa--tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~----------~~~~~------------------~~---   71 (396)
                      +|++|||||  +|.||.+++++|++     +|++|++++|++          .....                  ..   
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRA-----AGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHH-----TTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHH-----CCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            478999999  89999999999999     899999998631          00000                  00   


Q ss_pred             -CCeeEEEecC------------CC--------hHHHHHHH-------hcCCCeeEEEEecc---CC---C--ccHHHHH
Q 016047           72 -HLVEYVQCDV------------SD--------PEETQAKL-------SQLTDVTHIFYVTW---TN---R--STEAENC  115 (396)
Q Consensus        72 -~~v~~~~~Dl------------~d--------~~~~~~~~-------~~~~~V~h~a~~~~---~~---~--~~~~~~~  115 (396)
                       ....++.+|+            +|        ++++++++       ..+|.++|+|+...   ..   .  +.....+
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence             0024444442            22        22333333       35778999988431   11   1  1356678


Q ss_pred             HhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047          116 KINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus       116 ~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                      ++|+.|+.++++++...-.+-.+++++||
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~g~Iv~isS  192 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEGGSALALSY  192 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             hHhhHHHHHHHHHHHHHHhcCceEEEEec
Confidence            99999999999988765111146666654

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.76  E-value=1e-08  Score=95.11  Aligned_cols=106  Identities=17%  Similarity=0.166  Sum_probs=75.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC----CCC-CCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----WNA-DHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      +++||+||||+||+|+.++..|+.     +|  ++|+++++++...    ... ..... +.+ +.+..++.++++++|.
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~-----~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~-v~~-~~~t~d~~~al~gaDv   79 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKM-----NPLVSVLHLYDVVNAPGVTADISHMDTGAV-VRG-FLGQQQLEAALTGMDL   79 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHH-----CTTEEEEEEEESSSHHHHHHHHHTSCSSCE-EEE-EESHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEeCCCcHhHHHHhhcccccce-EEE-EeCCCCHHHHcCCCCE
Confidence            457999999999999999999987     56  7899999765310    000 01111 122 3345677889999999


Q ss_pred             eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      |+|+++..........++...|+.+++++++++++.+++.
T Consensus        80 Vi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~  119 (326)
T 1smk_A           80 IIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRA  119 (326)
T ss_dssp             EEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred             EEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence            9999875433333456778999999999999999987543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.74  E-value=1.2e-08  Score=102.83  Aligned_cols=115  Identities=10%  Similarity=-0.035  Sum_probs=76.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--------CC------CCCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--------NW------NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--------~~------~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      .+|.+|||||+|.||.+++++|++     +|++|++++|....        ..      ....+ ..+.+|+.|.+++++
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~-----~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~D~~d~~~~~~   91 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAE-----RGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG-GEAVADYNSVIDGAK   91 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEC--------------CHHHHHHHHHHTT-CCEEECCCCGGGHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC-CeEEEEeCCHHHHHH
Confidence            358999999999999999999999     89999999883210        00      00011 124589999887766


Q ss_pred             HHh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           90 KLS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        90 ~~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      +++       .+|.++|+|+......      ++....+++|+.|+.++++++...  ..+..+|+++||
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS  161 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSS  161 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            665       4677899887543211      145678899999999999988443  123467777765

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.73  E-value=3.3e-08  Score=92.08  Aligned_cols=115  Identities=10%  Similarity=0.051  Sum_probs=76.7

Q ss_pred             CCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCC------------CCC-------CCCCCCeeEEEecCCC
Q 016047           25 QSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRP------------KPN-------WNADHLVEYVQCDVSD   83 (396)
Q Consensus        25 ~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~------------~~~-------~~~~~~v~~~~~Dl~d   83 (396)
                      +|.+|||||++  .||.+++++|.+     +|++|++.+|++            ...       ......+.++.+|+.+
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~-----~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   76 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSK-----RNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASF   76 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTC
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHH-----CCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccc
Confidence            47899999875  899999999999     899999776543            000       0011246788899887


Q ss_pred             h--H------------------HHHHHHh-------cCCCeeEEEEeccC-CC-------ccHHHHHHhHHHHHHHHHHH
Q 016047           84 P--E------------------ETQAKLS-------QLTDVTHIFYVTWT-NR-------STEAENCKINGSMFRNVLRA  128 (396)
Q Consensus        84 ~--~------------------~~~~~~~-------~~~~V~h~a~~~~~-~~-------~~~~~~~~~nv~gt~~ll~a  128 (396)
                      .  +                  ++.++++       .+|.++|+|+.... ..       +.....+++|+.|+.++.++
T Consensus        77 ~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  156 (329)
T 3lt0_A           77 DTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKY  156 (329)
T ss_dssp             SSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence            6  5                  5544443       35667787764211 11       13566789999999999998


Q ss_pred             HcccCCCcceEEEecc
Q 016047          129 VIPNAPNLRHVCLQTG  144 (396)
Q Consensus       129 ~~~~~~~~~~~~~~s~  144 (396)
                      +...-.+-.+++++||
T Consensus       157 ~~p~m~~~g~Iv~isS  172 (329)
T 3lt0_A          157 FVNIMKPQSSIISLTY  172 (329)
T ss_dssp             HGGGEEEEEEEEEEEC
T ss_pred             HHHHHhhCCeEEEEeC
Confidence            8765211145666654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.73  E-value=2.2e-08  Score=103.83  Aligned_cols=155  Identities=19%  Similarity=0.166  Sum_probs=104.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcC-CCCCCCCCc-EEEEEeCCCCCCC----------CCCCCeeEEEecCCChHHHHH
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPW-KVYGVARRPKPNW----------NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~-~~~~~~~g~-~V~~l~R~~~~~~----------~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      ..+++++|||||+|-||..+++.|. +     +|. .|++++|+.....          ....++.++.||++|.+++++
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~-----~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~  601 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIE-----RGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAK  601 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHT-----SSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHH-----cCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHH
Confidence            3456899999999999999999998 7     788 4898999742210          012357889999999999999


Q ss_pred             HHhcC------CCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccccccc
Q 016047           90 KLSQL------TDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        90 ~~~~~------~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                      +++.+      |.|+|+|+......      ++....+++|+.|+.++.+++..   .+ +|+.+||...+      .|.
T Consensus       602 ~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~---~l-~iV~~SS~ag~------~g~  671 (795)
T 3slk_A          602 VLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP---DV-ALVLFSSVSGV------LGS  671 (795)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT---TS-EEEEEEETHHH------HTC
T ss_pred             HHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh---CC-EEEEEccHHhc------CCC
Confidence            88765      34777766432111      14566789999999999998743   34 66766643222      221


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhHHHHHHHHh---hcCCCeeEEEEcCCceee
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTLEDILFEEV---EKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~e~~l~~~~---~~~~~~~~~ilRp~~v~G  207 (396)
                                     +. ...|+..|.+.+.+   .+..|+++..+-|+.+-.
T Consensus       672 ---------------~g-~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t  708 (795)
T 3slk_A          672 ---------------GG-QGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAE  708 (795)
T ss_dssp             ---------------SS-CHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSC
T ss_pred             ---------------CC-CHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECc
Confidence                           11 11266543333222   145689999999988765

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.70  E-value=3.5e-09  Score=98.53  Aligned_cols=112  Identities=12%  Similarity=0.013  Sum_probs=79.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-------EEEEEeCC----CCCC-----CCCCCCeeEEEecCCChHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-------KVYGVARR----PKPN-----WNADHLVEYVQCDVSDPEETQ   88 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-------~V~~l~R~----~~~~-----~~~~~~v~~~~~Dl~d~~~~~   88 (396)
                      ++||+||||+||+|++++..|+.     +|+       +|+++++.    ....     ...+....+ ..|+....++.
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~   78 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPM   78 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcH
Confidence            46999999999999999999987     453       79998887    2100     000000111 24555555677


Q ss_pred             HHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEec
Q 016047           89 AKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQT  143 (396)
Q Consensus        89 ~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s  143 (396)
                      ++++++|.|+|+|+.......+..+....|+.+++++++++++.+ ++. +++++|
T Consensus        79 ~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a-~ii~~S  133 (329)
T 1b8p_A           79 TAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNI-KVLVVG  133 (329)
T ss_dssp             HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTC-EEEECS
T ss_pred             HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEEEcc
Confidence            889999999999886544344667888999999999999999984 543 444443

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.67  E-value=4.4e-08  Score=107.39  Aligned_cols=116  Identities=12%  Similarity=0.036  Sum_probs=81.8

Q ss_pred             CCCEEEEEcCCCh-hHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCC------C-----CCCCCeeEEEecCCChHHHHHH
Q 016047           24 YQSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------W-----NADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        24 ~~~~iLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~------~-----~~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      .+|++|||||+|. ||.++++.|++     .|++|++++ |+....      .     ....++.++.+|++|.++++++
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~-----~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQ-----GGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHH-----CCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            3589999999998 99999999999     899999985 443211      0     0123578899999999988776


Q ss_pred             Hh-------------cCCCeeEEEEeccCC-C--------ccHHHHHHhHHHHHHHHHHHHccc---C-CCcceEEEecc
Q 016047           91 LS-------------QLTDVTHIFYVTWTN-R--------STEAENCKINGSMFRNVLRAVIPN---A-PNLRHVCLQTG  144 (396)
Q Consensus        91 ~~-------------~~~~V~h~a~~~~~~-~--------~~~~~~~~~nv~gt~~ll~a~~~~---~-~~~~~~~~~s~  144 (396)
                      +.             .+|.++|+|+..... .        +.....+++|+.|+.+++++++..   . .+-.+|+.+||
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS  828 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  828 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECS
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcC
Confidence            63             367788888753222 0        123567899999999999887322   1 11246776654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.56  E-value=5.5e-08  Score=106.46  Aligned_cols=101  Identities=14%  Similarity=0.067  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCCh-hHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CC-CCCCeeEEEecCCChHHHHHH
Q 016047           24 YQSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WN-ADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        24 ~~~~iLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~-~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      .+|++|||||+|. ||.+++++|++     .|++|++++++....           .. ...++.++.+|++|.+++.++
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~-----~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLS-----GGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHH-----CCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            3589999999999 99999999999     899999986543211           00 123578899999999988776


Q ss_pred             Hh-----------cCCCeeEEEEeccCC---C------ccHHHHHHhHHHHHHHHHHHH
Q 016047           91 LS-----------QLTDVTHIFYVTWTN---R------STEAENCKINGSMFRNVLRAV  129 (396)
Q Consensus        91 ~~-----------~~~~V~h~a~~~~~~---~------~~~~~~~~~nv~gt~~ll~a~  129 (396)
                      +.           .+|.|+|+|+.....   .      +.....+++|+.|+.++++++
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~  784 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQ  784 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            64           367788888753221   1      123567899999999888764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.55  E-value=4.9e-08  Score=103.97  Aligned_cols=101  Identities=14%  Similarity=0.061  Sum_probs=75.0

Q ss_pred             CCEEEEEcCCCh-hHHHHHHHcCCCCCCCCCcEEEEEe-CCCCCC------CC-----CCCCeeEEEecCCChHHHHHHH
Q 016047           25 QSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVA-RRPKPN------WN-----ADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l~-R~~~~~------~~-----~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      +|++|||||+|. ||.+++++|++     +|++|++++ |+....      ..     ...++.++.+|++|.+++++++
T Consensus       476 GKvALVTGASgGGIGrAIAr~LA~-----~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          476 DKYVLITGAGKGSIGAEVLQGLLQ-----GGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             SCCEEECSCSSSSTHHHHHHHHHH-----HTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             CCEEEEECCChHHHHHHHHHHHHH-----CcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            578999999998 99999999999     899999885 543221      10     0235778999999998887765


Q ss_pred             h-------------cCCCeeEEEEeccCC---C------ccHHHHHHhHHHHHHHHHHHHc
Q 016047           92 S-------------QLTDVTHIFYVTWTN---R------STEAENCKINGSMFRNVLRAVI  130 (396)
Q Consensus        92 ~-------------~~~~V~h~a~~~~~~---~------~~~~~~~~~nv~gt~~ll~a~~  130 (396)
                      +             .+|.++|+|+.....   .      +.....+++|+.|+.+++++++
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~  611 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQK  611 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3             367788888753221   1      1235678999999999998873

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.52  E-value=8.1e-08  Score=88.65  Aligned_cols=99  Identities=14%  Similarity=0.120  Sum_probs=69.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeC--CCCCC-----------CCCCCCeeEEEecCCChHHHHHH
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVAR--RPKPN-----------WNADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R--~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      +||+||||+||+|++++..|+.     +++  ++.++++  .....           ......+++...|    +++.++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~-----~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a   71 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAK-----EPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRI   71 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHT-----CTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG
T ss_pred             CEEEEECCCChhHHHHHHHHHh-----CCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH
Confidence            4899999999999999999987     443  6887887  32100           0000122222221    124567


Q ss_pred             HhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047           91 LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  133 (396)
Q Consensus        91 ~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  133 (396)
                      ++++|.|+|+|+.......+..++...|+.+++++++++++++
T Consensus        72 l~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~  114 (313)
T 1hye_A           72 IDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC  114 (313)
T ss_dssp             GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            8999999999875443334567789999999999999999986

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.51  E-value=1.1e-08  Score=94.01  Aligned_cols=98  Identities=13%  Similarity=0.079  Sum_probs=68.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeC--CCCCC----------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVAR--RPKPN----------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R--~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      +||+||||+||+|+.++..|+.     +++  ++..+++  .....          .....++++.. +  +    .+++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~-----~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~   68 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIAL-----RDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDT   68 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGG
T ss_pred             CEEEEECCCChHHHHHHHHHHh-----CCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHh
Confidence            4899999999999999999987     443  6887877  32110          00011222222 1  1    3458


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  135 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  135 (396)
                      +++|.|+|+|+..........++...|+.+++++++++++.+++
T Consensus        69 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~  112 (303)
T 1o6z_A           69 AGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDD  112 (303)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            89999999987544333456778899999999999999998643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.26  E-value=1.2e-06  Score=88.12  Aligned_cols=115  Identities=17%  Similarity=0.036  Sum_probs=77.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CC-CCCCeeEEEecC-CChHHH-H---HHHhcC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WN-ADHLVEYVQCDV-SDPEET-Q---AKLSQL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~-~~~~v~~~~~Dl-~d~~~~-~---~~~~~~   94 (396)
                      +|.+|||||++-||..++++|.+     +|++|++.+|+....    .. ...++..+.+|+ .+.+.+ +   +.+..+
T Consensus       322 gkvalVTGas~GIG~a~A~~la~-----~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          322 DKVVLITGAGAGLGKEYAKWFAK-----YGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             CCeEEEECcchHHHHHHHHHHHH-----CCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            58899999999999999999999     899999988743211    00 112455677888 555432 2   234457


Q ss_pred             CCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           95 TDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        95 ~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                      |.++|.|+.....    .  ++.+..+++|+.|+.++.+++...  ..+-.+++.+||
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS  454 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITS  454 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            8888888753221    1  145678899999999988877654  112346776664

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.22  E-value=6.6e-07  Score=86.63  Aligned_cols=102  Identities=15%  Similarity=0.164  Sum_probs=72.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC-CCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      +++|+||| +|++|+++++.|.+     .|++|++++|+....  .. ...++..+.+|+.|.+++.+++.++|.|+|++
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~-----~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTD-----SGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHT-----TTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHh-----CcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence            36899998 89999999999998     789999999975321  11 11347788999999999999999999999986


Q ss_pred             EeccCCCccHHHHHH--hH-------HHHHHHHHHHHcccC
Q 016047          102 YVTWTNRSTEAENCK--IN-------GSMFRNVLRAVIPNA  133 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~--~n-------v~gt~~ll~a~~~~~  133 (396)
                      .... ...-....++  .|       ...+.+++++|++++
T Consensus        77 ~~~~-~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG  116 (450)
T 1ff9_A           77 PYTF-HATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG  116 (450)
T ss_dssp             C--C-HHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred             cccc-chHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC
Confidence            5321 1110111111  12       246778999998875

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.21  E-value=9.6e-08  Score=88.53  Aligned_cols=112  Identities=17%  Similarity=0.103  Sum_probs=73.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCC--CC------CC--CCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPK--PN------WN--ADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~--~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ++||+||||+|+||++++..|.......  +...++++++.+.  ..      ..  ..+-..    ++.......++++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~   78 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFK   78 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhC
Confidence            4689999999999999999998732211  1123888887531  00      00  001111    1211223456789


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      ++|.|+|+|+....+..+..++++.|+..++++++++++++++-.+++
T Consensus        79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vi  126 (333)
T 5mdh_A           79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVI  126 (333)
T ss_dssp             TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence            999999997754333346678899999999999999999876433344

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.21  E-value=1.3e-05  Score=76.40  Aligned_cols=76  Identities=12%  Similarity=0.027  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcCCChhHHH--HHHHcCCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCeeEEEecC
Q 016047           23 SYQSVALIVGVTGIVGNS--LAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDV   81 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~--l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl   81 (396)
                      ..+|++|||||++-||.+  ++++|.+     .|++|++++|......                   .....+..+.+|+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~-----~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv  132 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGG-----PEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDA  132 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSS-----SCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHh-----CCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeC
Confidence            557899999999999999  9999998     7999999998643210                   0113567899999


Q ss_pred             CChHHHHHHHhc-------CCCeeEEEEe
Q 016047           82 SDPEETQAKLSQ-------LTDVTHIFYV  103 (396)
Q Consensus        82 ~d~~~~~~~~~~-------~~~V~h~a~~  103 (396)
                      +|+++++++++.       +|.++|.|+.
T Consensus       133 td~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          133 FSNETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             TCHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            999877665543       4556666553

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.18  E-value=3.1e-07  Score=83.70  Aligned_cols=74  Identities=18%  Similarity=0.064  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      .++++|||||+|.+|++++..|.+     .|++|++++|+....      .....++.++.+|+++++++.++++.+|.|
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~-----~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~Dvl  192 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAG-----EGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFV  192 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEE
Confidence            458999999999999999999998     799999999974321      000024567889999999999999999999


Q ss_pred             eEEEE
Q 016047           98 THIFY  102 (396)
Q Consensus        98 ~h~a~  102 (396)
                      +|+++
T Consensus       193 Vn~ag  197 (287)
T 1lu9_A          193 FTAGA  197 (287)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99875

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.16  E-value=3e-06  Score=73.71  Aligned_cols=74  Identities=15%  Similarity=0.208  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC----------------CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH--
Q 016047           24 YQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE--   85 (396)
Q Consensus        24 ~~~~iLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~--   85 (396)
                      .+|+||||||                ||.+|.+++++|++     +|++|+.+.|..........+++++  |+...+  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~-----~Ga~V~lv~~~~~~~~~~~~~~~~~--~v~s~~em   74 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLS-----AGYEVCLITTKRALKPEPHPNLSIR--EITNTKDL   74 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHH-----TTCEEEEEECTTSCCCCCCTTEEEE--ECCSHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHH-----CCCEEEEEeCCccccccCCCCeEEE--EHhHHHHH
Confidence            4689999999                99999999999999     8999999999753221112355544  554554  


Q ss_pred             --HHHHHHhcCCCeeEEEEec
Q 016047           86 --ETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        86 --~~~~~~~~~~~V~h~a~~~  104 (396)
                        .+.+.+..+|.++|+|+.+
T Consensus        75 ~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           75 LIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHHGGGCSEEEECSBCC
T ss_pred             HHHHHHhcCCCCEEEEcCccc
Confidence              3444556788889987743

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.13  E-value=1.7e-06  Score=81.62  Aligned_cols=92  Identities=15%  Similarity=0.098  Sum_probs=67.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      +|||+|.|| |++|+.+++.|.+      .++|++.+|.........+.+..+.+|+.|.+++.++++++|.|++++...
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~------~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~   88 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD------EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF   88 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT------TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc------CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence            468999998 9999999999975      578999888653211112456788999999999999999999888874310


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEe
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQ  142 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~  142 (396)
                                +     + ..++++|.+++   +|++-+
T Consensus        89 ----------~-----~-~~v~~~~~~~g---~~yvD~  107 (365)
T 3abi_A           89 ----------L-----G-FKSIKAAIKSK---VDMVDV  107 (365)
T ss_dssp             ----------G-----H-HHHHHHHHHHT---CEEEEC
T ss_pred             ----------c-----c-chHHHHHHhcC---cceEee
Confidence                      0     1 14788888875   345533

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.12  E-value=1.9e-06  Score=79.29  Aligned_cols=105  Identities=16%  Similarity=0.142  Sum_probs=73.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      +||.|+||+|++|..++..|+.     +|  ++|+++++++...       .....+++...+    ..+++++++++|.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~-----~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~~aDv   71 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKN-----SPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG----PEQLPDCLKGCDV   71 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHT-----CTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES----GGGHHHHHTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHh-----CCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecC----CCCHHHHhCCCCE
Confidence            4899999999999999999997     55  6899999875110       000001111111    1346778999999


Q ss_pred             eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047           97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus        97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                      |+++++..........+....|+..++.+++.+++.+++...+
T Consensus        72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi  114 (314)
T 1mld_A           72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMIC  114 (314)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence            9999775443333556778999999999999999887654333

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.12  E-value=2.5e-06  Score=98.21  Aligned_cols=118  Identities=17%  Similarity=0.126  Sum_probs=82.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCCC---------C-CCCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .+|++|||||+|-||..+++.|.+     +|++ |++++|+....         + ....++.++.+|++|.++++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~-----~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~ 1957 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRL-----RGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLIT 1957 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHH-----CCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHH
Confidence            458999999999999999999998     7887 77788875431         0 012357788999999988776654


Q ss_pred             c------CCCeeEEEEeccC------CCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccce
Q 016047           93 Q------LTDVTHIFYVTWT------NRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTK  146 (396)
Q Consensus        93 ~------~~~V~h~a~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~  146 (396)
                      .      +|.|+|+|+....      ..++....+++|+.|+.++.+++....+...+|+.+||..
T Consensus      1958 ~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~a 2023 (2512)
T 2vz8_A         1958 EATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVS 2023 (2512)
T ss_dssp             HHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHH
T ss_pred             HHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchh
Confidence            3      5567887764221      1124566789999999999888776544456788777643

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.06  E-value=2.7e-05  Score=73.14  Aligned_cols=76  Identities=12%  Similarity=0.020  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-------------------CCCCCeeEEEecCCCh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-------------------NADHLVEYVQCDVSDP   84 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-------------------~~~~~v~~~~~Dl~d~   84 (396)
                      -+|++|||||++-||.++++.|.+.    .|.+|++++|+.....                   .....+..+.+|++|+
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g----~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFG----CGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSD  121 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHH----HCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHh----cCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCH
Confidence            4689999999999999999999861    3889999988653210                   0113466899999999


Q ss_pred             HHHHHHHhc-------CCCeeEEEEe
Q 016047           85 EETQAKLSQ-------LTDVTHIFYV  103 (396)
Q Consensus        85 ~~~~~~~~~-------~~~V~h~a~~  103 (396)
                      ++++++++.       +|.++|.|+.
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            877665543       5667777654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.04  E-value=3.2e-05  Score=73.27  Aligned_cols=76  Identities=12%  Similarity=-0.008  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-------------------CCCCeeEEEecCCCh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-------------------ADHLVEYVQCDVSDP   84 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-------------------~~~~v~~~~~Dl~d~   84 (396)
                      .+|++|||||++-||.++++.|.+.    .|.+|++++|+......                   ....+..+.+|++|+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~----~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~  135 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFG----FGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSD  135 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHH----HCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHh----CCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCH
Confidence            4789999999999999999999861    38899999987543210                   112466889999999


Q ss_pred             HHHHHHHh--------cCCCeeEEEEe
Q 016047           85 EETQAKLS--------QLTDVTHIFYV  103 (396)
Q Consensus        85 ~~~~~~~~--------~~~~V~h~a~~  103 (396)
                      ++++++++        .+|.++|.|+.
T Consensus       136 ~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          136 AARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            87655443        34556776653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.98  E-value=3.9e-06  Score=84.28  Aligned_cols=115  Identities=10%  Similarity=-0.048  Sum_probs=73.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC---------CC-----CCCCCCeeEEEecCCChHHHH-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK---------PN-----WNADHLVEYVQCDVSDPEETQ-   88 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~---------~~-----~~~~~~v~~~~~Dl~d~~~~~-   88 (396)
                      .+|.+|||||++-||..++++|.+     +|++|++.+|+..         ..     .....+-+ ..+|+.|.++++ 
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~-----~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~   80 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAK-----LGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDK   80 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----cCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHH
Confidence            358999999999999999999999     8999999887541         00     00000112 235776663222 


Q ss_pred             ------HHHhcCCCeeEEEEeccCC----C--ccHHHHHHhHHHHHHHHHHHHcccC--CCcceEEEecc
Q 016047           89 ------AKLSQLTDVTHIFYVTWTN----R--STEAENCKINGSMFRNVLRAVIPNA--PNLRHVCLQTG  144 (396)
Q Consensus        89 ------~~~~~~~~V~h~a~~~~~~----~--~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~~~~~s~  144 (396)
                            +.+..+|.++|.|+.....    .  ++.+..+++|+.|+.++.+++...-  .+-.+++.+||
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS  150 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS  150 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence                  2334578888888753211    1  1456788999999998888776541  11346776664

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.97  E-value=2.7e-06  Score=68.53  Aligned_cols=71  Identities=15%  Similarity=0.137  Sum_probs=54.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHIF  101 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~a  101 (396)
                      .++|+|+|+ |.+|..+++.|.+     .|++|++++|++... .....+...+.+|..+++.+.++ +.++|.|++++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~-----~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHR-----MGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAI   78 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHH-----TTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence            357999997 9999999999998     789999999875321 11123456788999998877765 67788777763

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.93  E-value=1.3e-05  Score=65.53  Aligned_cols=70  Identities=10%  Similarity=0.124  Sum_probs=54.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC---CCC--CCCCeeEEEecCCChHHHHHH-HhcCCCee
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP---NWN--ADHLVEYVQCDVSDPEETQAK-LSQLTDVT   98 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~---~~~--~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~   98 (396)
                      +++|+|+|+ |.+|+.+++.|.+     .|++|++++|++..   ...  ...++.++.+|.++++.+.++ +.++|.|+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~-----~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQ-----RGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHH-----CCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence            468999995 9999999999998     79999999997421   000  124688999999999988876 77777655


Q ss_pred             EE
Q 016047           99 HI  100 (396)
Q Consensus        99 h~  100 (396)
                      .+
T Consensus        77 ~~   78 (153)
T 1id1_A           77 AL   78 (153)
T ss_dssp             EC
T ss_pred             Ee
Confidence            54

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.91  E-value=1.9e-06  Score=69.44  Aligned_cols=69  Identities=19%  Similarity=0.149  Sum_probs=52.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~  100 (396)
                      ++|+|+|+ |++|+.+++.|.+     .|++|+++++++... .....++.++.+|.++++.+.++ +.++|.|+.+
T Consensus         7 ~~v~I~G~-G~iG~~la~~L~~-----~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~   77 (141)
T 3llv_A            7 YEYIVIGS-EAAGVGLVRELTA-----AGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLIT   77 (141)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHH-----TTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHH-----CCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence            68999996 9999999999998     899999999976431 00123678899999999988764 3455555443

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.80  E-value=2.9e-05  Score=63.61  Aligned_cols=71  Identities=15%  Similarity=0.084  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCC-CCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNA-DHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~-~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~  100 (396)
                      .+++|+|+| .|.+|..+++.|.+     .|++|++++|++... ... ..++.++.+|..+++.+.++ +.++|.|+.+
T Consensus        18 ~~~~v~IiG-~G~iG~~la~~L~~-----~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           18 KSKYIVIFG-CGRLGSLIANLASS-----SGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            357999999 59999999999998     799999999976432 111 24567888999888777654 6677766665

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.75  E-value=7.3e-05  Score=64.77  Aligned_cols=71  Identities=18%  Similarity=0.053  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC----------------CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHH
Q 016047           24 YQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEET   87 (396)
Q Consensus        24 ~~~~iLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~   87 (396)
                      .+|+||||||                ||.+|.+++++|.+     .|++|+++.|......  ..+++  .+|+.+.+++
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~-----~Ga~V~l~~~~~~l~~--~~g~~--~~dv~~~~~~   77 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAAR-----RGANVTLVSGPVSLPT--PPFVK--RVDVMTALEM   77 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHH-----TTCEEEEEECSCCCCC--CTTEE--EEECCSHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHH-----CCCEEEEEECCccccc--CCCCe--EEccCcHHHH
Confidence            4689999999                79999999999999     8999999988652111  12343  5788887654


Q ss_pred             HH----HHhcCCCeeEEEEe
Q 016047           88 QA----KLSQLTDVTHIFYV  103 (396)
Q Consensus        88 ~~----~~~~~~~V~h~a~~  103 (396)
                      .+    .+..+|.++|+|+.
T Consensus        78 ~~~v~~~~~~~Dili~~Aav   97 (226)
T 1u7z_A           78 EAAVNASVQQQNIFIGCAAV   97 (226)
T ss_dssp             HHHHHHHGGGCSEEEECCBC
T ss_pred             HHHHHHhcCCCCEEEECCcc
Confidence            33    34568888888774

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.74  E-value=8.1e-06  Score=65.33  Aligned_cols=69  Identities=14%  Similarity=0.121  Sum_probs=52.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~  100 (396)
                      ++|+|+|+ |++|..+++.|.+     .|++|++++|++...  .....++.++.+|..+++.+.++ +.++|.|+++
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~-----~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   76 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSE-----KGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV   76 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence            68999996 9999999999998     789999999975321  10112566788999998877654 5677777776

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.74  E-value=9.4e-06  Score=65.34  Aligned_cols=75  Identities=21%  Similarity=0.088  Sum_probs=57.1

Q ss_pred             cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCCe
Q 016047           20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDV   97 (396)
Q Consensus        20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V   97 (396)
                      ++..++++|+|.| .|.+|..+++.|.+     .|++|+++++++... .....++.++.+|.++++.+.++ +.++|.|
T Consensus         2 ~~~~~~~~viIiG-~G~~G~~la~~L~~-----~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~v   75 (140)
T 3fwz_A            2 NAVDICNHALLVG-YGRVGSLLGEKLLA-----SDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWL   75 (140)
T ss_dssp             CCCCCCSCEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred             CcccCCCCEEEEC-cCHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEE
Confidence            4566778999999 59999999999998     799999999986431 00124778999999999887664 4556644


Q ss_pred             eEE
Q 016047           98 THI  100 (396)
Q Consensus        98 ~h~  100 (396)
                      +-+
T Consensus        76 i~~   78 (140)
T 3fwz_A           76 ILT   78 (140)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            433

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.70  E-value=4.5e-05  Score=70.69  Aligned_cols=104  Identities=13%  Similarity=0.105  Sum_probs=70.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .+||.|+||+|++|+.++..|+.     .|  .+|+++++.....          .....++.+       ..+..++++
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~-----~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al~   75 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAM-----MRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEALT   75 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHH-----TTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHh-----cCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHhC
Confidence            47999999999999999988876     44  4799999864210          111112221       123456789


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      ++|.|+.+|+....+..+..+++..|+...+.+.+.+.+.+++-.+++
T Consensus        76 dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vl  123 (343)
T 3fi9_A           76 DAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVI  123 (343)
T ss_dssp             TEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred             CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEE
Confidence            999999987754333335677889999999999999999876554333

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.63  E-value=1.8e-05  Score=76.71  Aligned_cols=73  Identities=16%  Similarity=0.160  Sum_probs=58.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      .++|+|+|| |++|+.+++.|++.    .+++|++++|+....  .....++..+.+|+.|.+++.++++++|.|++++.
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~----~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp   97 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAAN----DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIP   97 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTS----TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhC----CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCc
Confidence            368999997 99999999999982    378999999975321  10112567788999999999999999999999855

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.63  E-value=3.7e-05  Score=73.36  Aligned_cols=71  Identities=18%  Similarity=0.170  Sum_probs=56.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC---cEEEEEeCCCCCC------CC--CCCCeeEEEecCCChHHHHHHHhc-
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP---WKVYGVARRPKPN------WN--ADHLVEYVQCDVSDPEETQAKLSQ-   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g---~~V~~l~R~~~~~------~~--~~~~v~~~~~Dl~d~~~~~~~~~~-   93 (396)
                      ++|+|+|| |++|+.+++.|.+     .|   .+|++.+|+....      ..  ...++..+.+|+.|.+++.+++++ 
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~-----~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAM-----NREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHT-----CTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh
Confidence            58999998 9999999999998     55   3899999975321      00  013588999999999999999988 


Q ss_pred             -CCCeeEEEE
Q 016047           94 -LTDVTHIFY  102 (396)
Q Consensus        94 -~~~V~h~a~  102 (396)
                       +|.|+|+++
T Consensus        76 ~~DvVin~ag   85 (405)
T 4ina_A           76 KPQIVLNIAL   85 (405)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence             788888854

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.60  E-value=0.00045  Score=80.14  Aligned_cols=104  Identities=12%  Similarity=0.009  Sum_probs=72.8

Q ss_pred             CCCCEEEEEcCCCh-hHHHHHHHcCCCCCCCCCcEEEEEeCCCCC-----C------C-CCCCCeeEEEecCCChHHHHH
Q 016047           23 SYQSVALIVGVTGI-VGNSLAEILPLPDTPGGPWKVYGVARRPKP-----N------W-NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        23 ~~~~~iLVtGatGf-iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~-----~------~-~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      ..+|.+|||||++- ||..+++.|++     .|.+|++++|+...     .      . .....+..+.+|++|++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~-----~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~ 2208 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLD-----GGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDK 2208 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHH-----TTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHH-----CCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHH
Confidence            35689999999999 99999999999     89999999997643     0      0 012346788999999998877


Q ss_pred             HHhc-----------CCCeeEEEEe----cc---CC----CccH----HHHHHhHHHHHHHHHHHHcc
Q 016047           90 KLSQ-----------LTDVTHIFYV----TW---TN----RSTE----AENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        90 ~~~~-----------~~~V~h~a~~----~~---~~----~~~~----~~~~~~nv~gt~~ll~a~~~  131 (396)
                      +++.           +|.++|+|+.    ..   ..    ..+.    ...+++|+.++..++.++..
T Consensus      2209 lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~ 2276 (3089)
T 3zen_D         2209 LVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSK 2276 (3089)
T ss_dssp             HHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6542           3445666553    00   00    1112    23478899998888776654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.45  E-value=4.3e-05  Score=64.35  Aligned_cols=71  Identities=17%  Similarity=0.159  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH--HhcCCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK--LSQLTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~--~~~~~~V~h   99 (396)
                      .+++|+|+| .|.+|..+++.|.+     . |++|++++|++... .....++.++.+|..+++.+.++  +.++|.|+.
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~-----~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRA-----RYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLL  111 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHH-----HHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHh-----ccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence            356899999 69999999999998     8 99999999976431 00113577889999998877765  566665555


Q ss_pred             E
Q 016047          100 I  100 (396)
Q Consensus       100 ~  100 (396)
                      +
T Consensus       112 ~  112 (183)
T 3c85_A          112 A  112 (183)
T ss_dssp             C
T ss_pred             e
Confidence            4

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.36  E-value=6.1e-05  Score=66.15  Aligned_cols=69  Identities=9%  Similarity=-0.092  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~  100 (396)
                      ..++|+|.|+ |.+|..+++.|.+     .|+ |++++|++... ... .++.++.+|.++++.+.++ +.++|.|+.+
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~-----~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRG-----SEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTT-----SEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHh-----CCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence            4578999996 9999999999998     799 99999876431 011 4688999999999988776 6777765544

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.35  E-value=3.5e-05  Score=66.97  Aligned_cols=69  Identities=14%  Similarity=0.091  Sum_probs=53.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~  100 (396)
                      |+|+|+|+ |.+|+++++.|.+     .|++|+++++++...  .....++.++.+|.++++.+.++ +.++|.|+-+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~-----~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   72 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLS-----RKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVIL   72 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHH-----TTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence            47999995 9999999999998     799999999976431  11113678999999999988776 6667755543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.19  E-value=0.00041  Score=63.86  Aligned_cols=100  Identities=15%  Similarity=0.056  Sum_probs=71.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC----------CC-CCCCeeEEEecCCChHHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WN-ADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~-~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      .+||.|+|+ |++|+.++..|..     .|+  +|++++++....          .+ ...++.+...|       .+++
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~-----~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~   71 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALIN-----QGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDC   71 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHh
Confidence            469999995 9999999999987     555  899999864210          00 11234444444       2357


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      +++|.|+.+++....+..+..+++..|+.-.+.+.+++.+.+++..
T Consensus        72 ~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~  117 (326)
T 3pqe_A           72 KDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGI  117 (326)
T ss_dssp             TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred             CCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeE
Confidence            8899888887644333335777889999999999999998876543

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.18  E-value=8.5e-05  Score=68.81  Aligned_cols=104  Identities=13%  Similarity=0.111  Sum_probs=68.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC--------C--CCCCC-eeEEEecCCChHHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN--------W--NADHL-VEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~--------~--~~~~~-v~~~~~Dl~d~~~~~~~~   91 (396)
                      ..||.|+||+|.||+.|+..|...+....+  .++..++..+...        .  ...+. .....++  +   ..+++
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~---~~~a~   98 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--D---PRVAF   98 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--C---HHHHT
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--C---hHHHh
Confidence            359999999999999999887653322111  2678888653210        0  00011 1222221  2   35678


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  133 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  133 (396)
                      +++|.|+-+|+...-+..+..++++.|..-.+.+.+++.+..
T Consensus        99 ~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a  140 (345)
T 4h7p_A           99 DGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVA  140 (345)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhc
Confidence            999988888775444444788899999999999999988864

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.00  E-value=0.0013  Score=61.42  Aligned_cols=76  Identities=9%  Similarity=-0.041  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcC-CCCCCCCCcEEEEEeCCCCCCCC-------------------CCCCeeEEEecCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILP-LPDTPGGPWKVYGVARRPKPNWN-------------------ADHLVEYVQCDVS   82 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~-~~~~~~~g~~V~~l~R~~~~~~~-------------------~~~~v~~~~~Dl~   82 (396)
                      .-+|++|||||+.-+|.+.+..|. .     .|..|+++.|.......                   .......+.||++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~-----~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~  122 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFG-----YGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAF  122 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHH-----HCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTT
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhh-----CCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCC
Confidence            346899999999999999888886 4     57789999886432210                   0124568999999


Q ss_pred             ChHHHHHHHhc-------CCCeeEEEEe
Q 016047           83 DPEETQAKLSQ-------LTDVTHIFYV  103 (396)
Q Consensus        83 d~~~~~~~~~~-------~~~V~h~a~~  103 (396)
                      +++.++++++.       +|.++|.++.
T Consensus       123 d~e~i~~vi~~i~~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          123 SDEIKAQVIEEAKKKGIKFDLIVYSLAS  150 (401)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence            99877665543       5667777664

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.96  E-value=0.00051  Score=63.17  Aligned_cols=102  Identities=13%  Similarity=0.060  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .+||.|+|| |.+|+.++..|+.     .|.  +|+++++.....          ......+.+...|       .++++
T Consensus         9 ~~kV~ViGa-G~vG~~~a~~l~~-----~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~   75 (326)
T 3vku_A            9 HQKVILVGD-GAVGSSYAYAMVL-----QGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAK   75 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhc
Confidence            469999995 9999999999987     454  899999864210          0001234444333       24588


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                      ++|.|+.+|+....+..+..++++.|+.-.+.+.+.+.+.+++...+
T Consensus        76 ~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~il  122 (326)
T 3vku_A           76 DADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFL  122 (326)
T ss_dssp             TCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEE
T ss_pred             CCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence            99988888765333333567778999999999999999887655433

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.94  E-value=0.001  Score=60.84  Aligned_cols=106  Identities=15%  Similarity=0.153  Sum_probs=70.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCC-CCCCCCcEEEEEeCCCCCC-----CCC-CCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           26 SVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN-----WNA-DHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~-~~~~~g~~V~~l~R~~~~~-----~~~-~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      +||.|+||+|++|..++..|... +.   ..+++++++.+...     +.. ...+++... ..  .+..++++++|.|+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~---~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivi   74 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPS---GSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVL   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCT---TEEEEEECSSTTHHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC---CceEEEEecCCCchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEE
Confidence            48999999999999999888762 21   24799999875110     000 112222111 00  01245688999887


Q ss_pred             EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      -.++....+..+..++++.|+.-.+.+.+++.+.+++..
T Consensus        75 i~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~  113 (312)
T 3hhp_A           75 ISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKAC  113 (312)
T ss_dssp             ECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcE
Confidence            776644333346788999999999999999998876554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.90  E-value=0.00024  Score=65.12  Aligned_cols=100  Identities=15%  Similarity=0.127  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC------CCC-----CCCeeEEE-ecCCChHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------WNA-----DHLVEYVQ-CDVSDPEETQAK   90 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~------~~~-----~~~v~~~~-~Dl~d~~~~~~~   90 (396)
                      |.+||.|+|| |.+|..++..|..     .|+ +|++++++....      ...     ....++.. .|      . ++
T Consensus         1 M~~kI~VIGa-G~vG~~~a~~la~-----~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a   67 (309)
T 1ur5_A            1 MRKKISIIGA-GFVGSTTAHWLAA-----KELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y-AD   67 (309)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHH-----TTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-----CCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HH
Confidence            4579999998 9999999999987     676 888888765321      000     01112221 22      2 45


Q ss_pred             HhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           91 LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        91 ~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      ++++|.|+..++..........+....|+...+.+.+.+.+.+++.
T Consensus        68 ~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a  113 (309)
T 1ur5_A           68 TANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNA  113 (309)
T ss_dssp             GTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTC
T ss_pred             HCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence            7889988888654332222345567889999999999998876443

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.79  E-value=0.0025  Score=58.48  Aligned_cols=103  Identities=15%  Similarity=0.076  Sum_probs=66.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCC------CC----CCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNW------NA----DHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~------~~----~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ++||.|+|| |++|..++..|..     .+.  +|++++.+.....      ..    ...+++..   .+    .++++
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~-----~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~   73 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMAL-----RQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVK   73 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHH-----TTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhC
Confidence            468999997 9999999999987     455  8999998753210      00    01222221   12    34588


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      ++|.|+.+++..........+....|+...+.+.+.+.+.+++...++
T Consensus        74 ~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv  121 (318)
T 1y6j_A           74 DCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV  121 (318)
T ss_dssp             TCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred             CCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEE
Confidence            999888876543322224567789999999999999998765544333

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.77  E-value=0.0032  Score=58.10  Aligned_cols=101  Identities=13%  Similarity=0.107  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC-------------CCCCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      +++||.|+|| |.+|+.++..|..     .|+ +|+++++++...             .....++.. .      .++.+
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~-----~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t------~d~~e   74 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCAL-----RELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E------YSYEA   74 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHH-----HTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E------CSHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e------CCHHH
Confidence            3479999997 9999999999998     687 899999875321             000011111 1      23455


Q ss_pred             HHhcCCCeeEEEEeccCCCc-----cHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           90 KLSQLTDVTHIFYVTWTNRS-----TEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        90 ~~~~~~~V~h~a~~~~~~~~-----~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      +++++|.|+-.++.......     ...+....|+.-.+.+.+.+.+..+...
T Consensus        75 a~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~  127 (331)
T 1pzg_A           75 ALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTF  127 (331)
T ss_dssp             HHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             HhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcE
Confidence            78999977776543222222     3455677888888899998888765433

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.70  E-value=0.0005  Score=65.55  Aligned_cols=70  Identities=11%  Similarity=0.059  Sum_probs=53.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTHI  100 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h~  100 (396)
                      +++|+|.| .|.+|..+++.|.+     .|++|+++++++... .....++.++.||.++++.+.++ +..++.|+-+
T Consensus         4 ~~~viIiG-~Gr~G~~va~~L~~-----~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~   75 (413)
T 3l9w_A            4 GMRVIIAG-FGRFGQITGRLLLS-----SGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA   75 (413)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence            35799999 59999999999998     799999999986431 00124678999999999988776 5666654443

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.60  E-value=0.0033  Score=56.81  Aligned_cols=102  Identities=17%  Similarity=0.106  Sum_probs=69.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      |||.|+|| |+||+.++..|..++...   ++..++..+...           ........+...+  |.    +.++++
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~---el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~a   70 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVD---EIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGS   70 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCS---EEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCC---EEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCC
Confidence            58999995 999999999887643332   799998764211           0001122233222  22    247888


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      |.|+-.|+.+.-+..+..+++..|..-.+.+.+++.+.+++-.
T Consensus        71 DvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~ai  113 (294)
T 2x0j_A           71 EIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESK  113 (294)
T ss_dssp             SEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCE
T ss_pred             CEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            9888777755444447889999999999999999999876544

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.60  E-value=0.0016  Score=59.57  Aligned_cols=102  Identities=12%  Similarity=0.052  Sum_probs=66.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      |||.|+|| |.+|+.++..|+.     .+.  +|+++++++...           .+....+++...|  +    .++++
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~-----~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~   68 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVAR-----QDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTE   68 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhC
Confidence            58999996 9999999999987     454  899999876421           0001122332222  1    24678


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                      ++|.|+-+++....+..+..+++..|+.-.+.+.+++.+.+++...+
T Consensus        69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vi  115 (314)
T 3nep_X           69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTII  115 (314)
T ss_dssp             TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEE
Confidence            89987777664333333567788999999999999999887655433

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.59  E-value=0.0059  Score=56.91  Aligned_cols=111  Identities=14%  Similarity=0.064  Sum_probs=67.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      +.||.|+||+|+||++++-.|...+......+|...+...+..            ....+-..-+.  +..  ...+.++
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~--~~y~~~~  107 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI--DPYEVFE  107 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES--CHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Eec--CCHHHhC
Confidence            4699999999999999999998643322111244433221110            00001111111  111  1256789


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHccc-CCCcceE
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN-APNLRHV  139 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~  139 (396)
                      ++|.|+-.|+....+..+..++++.|+.-.+.+.+++.+. +++.+.+
T Consensus       108 daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivl  155 (375)
T 7mdh_A          108 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVL  155 (375)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            9998777766443333467888999999999999999885 5554433

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.57  E-value=0.0021  Score=59.22  Aligned_cols=107  Identities=15%  Similarity=0.075  Sum_probs=71.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC---------CC-CCCCeeEEEecCCChHHHHH
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN---------WN-ADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~---------~~-~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      ....+||.|+|| |.+|+.++..|+.     +|.  +|++++++....         .. -......+..+  |.    +
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~-----~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~----~   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILM-----KDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY----S   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHH-----TTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG----G
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHh-----CCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH----H
Confidence            334579999996 9999999999987     454  899999864211         00 00111222221  22    2


Q ss_pred             HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      .++++|.|+.+|+....+..+..+++..|+.-.+.+.+++.+.+++...++
T Consensus        84 ~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlv  134 (331)
T 4aj2_A           84 VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLI  134 (331)
T ss_dssp             GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            478888887776644333346778899999999999999998876544433

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.53  E-value=0.0012  Score=61.19  Aligned_cols=68  Identities=9%  Similarity=-0.070  Sum_probs=52.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHH-HhcCCCeeE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH   99 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h   99 (396)
                      .++|+|.|+ |.+|+.+++.|.+     .|+ |+++++++........++.++.||.+|++.++++ +++++.|+-
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~-----~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~  183 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRG-----SEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIV  183 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGG-----SCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHh-----CCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEE
Confidence            468999995 9999999999998     799 9999987643211225788999999999998875 555554443

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.52  E-value=0.003  Score=57.20  Aligned_cols=103  Identities=17%  Similarity=0.112  Sum_probs=70.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      |||.|+|| |.+|..++..|..     .|+  +|+++++++...           .......++...  .|    .++++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~-----~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~   68 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLL-----NLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLK   68 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhC
Confidence            48999998 9999999999987     566  899999875321           000012222222  12    34678


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      ++|.|+.+++....+..+..+++..|+.-.+.+.+.+.+.+++...++
T Consensus        69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iiv  116 (294)
T 1oju_A           69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV  116 (294)
T ss_dssp             TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred             CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence            899877776644333335778889999999999999998876554433

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.50  E-value=0.0021  Score=59.03  Aligned_cols=103  Identities=17%  Similarity=0.151  Sum_probs=67.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC------C-----CCCCCeeEE-EecCCChHHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------W-----NADHLVEYV-QCDVSDPEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~------~-----~~~~~v~~~-~~Dl~d~~~~~~~~   91 (396)
                      .+||.|+|| |.+|..++..|..     .|+ +|+++++++...      .     +.....++. ..|   .    +++
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~-----~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~----~a~   73 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGL-----KELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y----AAI   73 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G----GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H----HHH
Confidence            369999997 9999999999988     677 999999876421      0     000122222 122   1    467


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +++|.|+.+++....+..+..+++..|+.-.+.+.+.+.+.+++...++
T Consensus        74 ~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iiv  122 (324)
T 3gvi_A           74 EGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVIC  122 (324)
T ss_dssp             TTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEe
Confidence            8899777776533222224566788899999999999998876544433

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.40  E-value=0.0043  Score=56.94  Aligned_cols=103  Identities=17%  Similarity=0.127  Sum_probs=70.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC------CC-----CCCCeeEEEecCCChHHHHHHHhc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------WN-----ADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~------~~-----~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      +||.|+| +|.+|+.++..|..     .+. +|+++++++...      ..     .....++...+  |    .+++++
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~-----~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d----~~a~~~   73 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALI-----KQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--D----YKDLEN   73 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--C----GGGGTT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C----HHHHCC
Confidence            6899999 59999999999987     555 899999876421      00     00122332111  2    246888


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +|.|+.+++....+..+..+.+..|+.-.+.+.+.+.+.+++...++
T Consensus        74 aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~viv  120 (321)
T 3p7m_A           74 SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVIC  120 (321)
T ss_dssp             CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEE
Confidence            99888876643333335677889999999999999998876544333

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.37  E-value=0.0009  Score=61.26  Aligned_cols=101  Identities=15%  Similarity=0.176  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC--CCC------CC-----CCCCeeEEEecCCChHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP--KPN------WN-----ADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~--~~~------~~-----~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      .++|.|+|+ |.+|+.++..|..     .|+ +|+++++++  ...      ..     ......+...+  +    .++
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~-----~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a   75 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQ-----KELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YAD   75 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHH
Confidence            368999996 9999999999988     688 999999873  110      00     00111122111  1    245


Q ss_pred             HhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           91 LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        91 ~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      ++++|.|+-+++....+..+..+++..|+.-.+.+.+++.+.+++..
T Consensus        76 ~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~  122 (315)
T 3tl2_A           76 TADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAI  122 (315)
T ss_dssp             GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            78888877776644333336778889999999999999998875543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.33  E-value=0.0017  Score=62.79  Aligned_cols=67  Identities=19%  Similarity=0.158  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHH-HhcCCCe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDV   97 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V   97 (396)
                      .|+|+|.| .|-+|++|++.|.+     +||+|+++++++...  ....-.+..+.||-++++.++++ +..+|.+
T Consensus         3 ~M~iiI~G-~G~vG~~la~~L~~-----~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~   72 (461)
T 4g65_A            3 AMKIIILG-AGQVGGTLAENLVG-----ENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADML   72 (461)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHTCS-----TTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEE
T ss_pred             cCEEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEE
Confidence            36899999 69999999999998     899999999876431  11113678999999999988775 4556643

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.33  E-value=0.0033  Score=57.88  Aligned_cols=108  Identities=12%  Similarity=0.041  Sum_probs=69.4

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------C-CCCCCeeEEEecCCChHHHHHHH
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      .++++||.|+|| |.+|..++..|+..+..   -+|.++++.....         . .....+++.. |  +    .+++
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~---~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~   74 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIA---QEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDA   74 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCC---SEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGG
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCC---CEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHh
Confidence            344579999998 99999999998863211   2799999864211         0 0002333332 2  2    3458


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +++|.|+..++....+.....+....|+...+.+.+.+.+.+++...++
T Consensus        75 ~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv  123 (326)
T 2zqz_A           75 KDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV  123 (326)
T ss_dssp             GGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            8999888776543322234567788999999999999998876554444

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.32  E-value=0.0024  Score=58.59  Aligned_cols=104  Identities=11%  Similarity=0.027  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      +++||.|+|| |.+|..++..|+.     ++.  +|.++++.....          ......+++.. |  +    .+++
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~-----~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~   70 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQ-----QGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDC   70 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHc-----CCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHh
Confidence            3469999998 9999999999987     333  799999864211          00002333332 2  1    3458


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +++|.|+..++....+.....+....|+...+.+.+.+.+.+++...++
T Consensus        71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv  119 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLV  119 (318)
T ss_dssp             TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            8999888776543322224456778999999999999998876554444

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=96.28  E-value=0.00095  Score=62.77  Aligned_cols=73  Identities=14%  Similarity=-0.004  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ..+++|+|+|+ |-+|..+++.|..     .|++|++++|++...  ....-+.. +.+|..+.+++.+.+.++|.|+++
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~-----~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~  236 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALG-----MGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGA  236 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEEC
Confidence            34589999998 9999999999998     799999999975321  00000112 467788888899999999988887


Q ss_pred             EE
Q 016047          101 FY  102 (396)
Q Consensus       101 a~  102 (396)
                      ++
T Consensus       237 ~g  238 (369)
T 2eez_A          237 VL  238 (369)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.26  E-value=0.0039  Score=53.45  Aligned_cols=69  Identities=13%  Similarity=0.042  Sum_probs=45.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCee-EEE-ecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVE-YVQ-CDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~-~~~-~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ++|+|+||+|++|+.+++.|.+     .|++|++++|++........... .+. +|+. ..++.++++++|.|+++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~   71 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLAT-----LGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLT   71 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEe
Confidence            4799999999999999999998     79999999997532100000000 000 1221 12355667889988876

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.20  E-value=0.0063  Score=55.82  Aligned_cols=103  Identities=15%  Similarity=0.028  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCeeEE-EecCCChHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYV-QCDVSDPEETQAK   90 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~-~~Dl~d~~~~~~~   90 (396)
                      ..+||.|+|+ |.+|+.++..|+.     .|.  +|+++++.....          ........+. ..|+.       .
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~-----~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------~   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLM-----KDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------V   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHH-----HCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------H
Confidence            3479999998 9999999999987     555  899999864211          0000111222 23432       2


Q ss_pred             HhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047           91 LSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus        91 ~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                      ++++|.|+-+++....+..+..+++..|+.-.+.+.+.+.+.++....+
T Consensus        87 ~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~il  135 (330)
T 3ldh_A           87 SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKE  135 (330)
T ss_dssp             CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEE
Confidence            6788877777664433333567788999999999999999886554433

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.06  E-value=0.0065  Score=55.19  Aligned_cols=36  Identities=22%  Similarity=0.236  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |.++|.|.||+|.+|..++..|.+     .|++|++++|++
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~-----~G~~V~~~~~~~   55 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRA-----SGYPISILDRED   55 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHT-----TTCCEEEECTTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHh-----CCCeEEEEECCc
Confidence            456899999999999999999998     799999998764

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.00  E-value=0.001  Score=59.65  Aligned_cols=34  Identities=18%  Similarity=0.135  Sum_probs=27.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      ++|+|+|++|.+|+.+++.+.+.    .+++++++.++
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~----~~~elva~~d~   39 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALAL----EGVQLGAALER   39 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHS----TTEECCCEECC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEec
Confidence            68999999999999999998753    68897755543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.94  E-value=0.0091  Score=54.70  Aligned_cols=103  Identities=13%  Similarity=0.047  Sum_probs=68.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC----------C-CCCCCeeEEEecCCChHHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------W-NADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ++||.|+|| |.+|..++..|..     ++  .+|.++++++...          . .....+++. .|  +    .+++
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~-----~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~----~~a~   72 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVN-----QSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E----YSDC   72 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----HCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C----GGGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C----HHHh
Confidence            469999998 9999999999887     44  3899998764210          0 000223333 22  2    3458


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +++|.|+-.++..........+....|+.-.+.+.+.+.+.+++...++
T Consensus        73 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv  121 (317)
T 3d0o_A           73 HDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV  121 (317)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            8999877776543333335567788999999999999988865544333

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.83  E-value=0.01  Score=54.31  Aligned_cols=106  Identities=14%  Similarity=0.074  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------C-CCCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------W-NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~-~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      +.+||.|+|| |.+|..++..|.....   ..+|+++++++...          . .....+++.. |  +    .++++
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~---~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~   73 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGI---ADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCR   73 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTC---CSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTT
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCC---CCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhC
Confidence            4479999998 9999999999876211   13899999875211          0 0111333332 2  1    24578


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      ++|.|+-+++..........+....|..-.+.+.+.+.+..+....++
T Consensus        74 ~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv  121 (316)
T 1ldn_A           74 DADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV  121 (316)
T ss_dssp             TCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             CCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEE
Confidence            899777776543322223455677888888889988888765444333

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=95.82  E-value=0.011  Score=53.74  Aligned_cols=63  Identities=16%  Similarity=0.009  Sum_probs=43.3

Q ss_pred             CCCE-EEEEcC-C-----------------ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC---------------
Q 016047           24 YQSV-ALIVGV-T-----------------GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN---------------   69 (396)
Q Consensus        24 ~~~~-iLVtGa-t-----------------GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~---------------   69 (396)
                      .+++ ||||+| |                 |-.|.++++++++     .|++|+.+.+...-..+               
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~-----~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~  109 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLA-----AGYGVLFLYRARSAFPYAHRFPPQTWLSALRP  109 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHH-----TTCEEEEEEETTSCCTTGGGSCHHHHHHHCEE
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHH-----CCCEEEEEecCCCcCcchhccCccchhhhhcc
Confidence            3455 999965 6                 9999999999999     89999999986432110               


Q ss_pred             ---CCCCeeEEEecCCChHHHHHHH
Q 016047           70 ---ADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        70 ---~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                         ...++..+.+|+...+++.+++
T Consensus       110 ~~~~~~~~~~i~v~v~sa~~m~~av  134 (313)
T 1p9o_A          110 SGPALSGLLSLEAEENALPGFAEAL  134 (313)
T ss_dssp             CCC-CCSEEEEEEETTTSTTHHHHH
T ss_pred             ccccccccceeeeccccHHHHHHHH
Confidence               0123446777776665544444

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.79  E-value=0.011  Score=53.78  Aligned_cols=98  Identities=18%  Similarity=0.159  Sum_probs=60.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      +||.|+|| |.+|..++..|..     .|+  +|+++++++...          ......+.+...   +.    +++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~-----~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~---~~----~a~~~   67 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVL-----RGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHG---GH----SELAD   67 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEE---CG----GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEEC---CH----HHhCC
Confidence            48999997 9999999999988     688  899999875210          000012233222   22    35788


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      +|.|+-+++....+.....+....|+...+.+++.+.+..+..
T Consensus        68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~  110 (304)
T 2v6b_A           68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDA  110 (304)
T ss_dssp             CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSS
T ss_pred             CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCe
Confidence            9977777543222222445667889999999999888775443

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=95.73  E-value=0.0018  Score=60.20  Aligned_cols=39  Identities=15%  Similarity=0.145  Sum_probs=33.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ...+++|||+||+|-+|..++..+..     .|.+|++++|++.
T Consensus       167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~Ga~V~~~~~~~~  205 (347)
T 2hcy_A          167 LMAGHWVAISGAAGGLGSLAVQYAKA-----MGYRVLGIDGGEG  205 (347)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECSTT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHH-----CCCcEEEEcCCHH
Confidence            34568999999999999999999987     7899999998754

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.70  E-value=0.014  Score=53.77  Aligned_cols=99  Identities=17%  Similarity=0.117  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC-------------CCCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW-------------NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~-------------~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      |+++|.|+|| |.+|..++..|..     .|+ +|++++++.....             ....++.. ..|      . +
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~-----~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~   78 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQ-----KDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENN------Y-E   78 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCC------H-H
Confidence            5579999997 9999999999988     788 8999998754210             00111111 122      2 4


Q ss_pred             HHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           90 KLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        90 ~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      +++++|.|+-.++....+.....+....|+.-.+.+.+.+.+..+..
T Consensus        79 al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a  125 (328)
T 2hjr_A           79 YLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNA  125 (328)
T ss_dssp             GGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             HHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCe
Confidence            57888876666543221111233456778888888888888765443

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.65  E-value=0.0098  Score=54.30  Aligned_cols=104  Identities=23%  Similarity=0.138  Sum_probs=69.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +||.|+|| |.+|..++..|+.....   .+|++++++....          ......+++.. +  +    .++++++|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~---~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD   69 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVA---REVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGAR   69 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC---SEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC---CEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCC
Confidence            58999997 99999999998873221   4899999864211          00012333332 2  2    34588899


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      .|+..++....+.....+....|+.-.+.+.+.+.+.+++...++
T Consensus        70 ~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv  114 (310)
T 2xxj_A           70 AVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV  114 (310)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEE
Confidence            888776643333335667788999999999999998876554443

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.62  E-value=0.03  Score=51.07  Aligned_cols=71  Identities=23%  Similarity=0.140  Sum_probs=50.7

Q ss_pred             cccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           14 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        14 ~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      +|+........+++|.|.| .|.||+.+++.|..     .|++|++.+|.+...    ..+....    ...+++++++.
T Consensus       128 ~W~~~~~~~l~g~tvGIiG-~G~IG~~vA~~l~~-----~G~~V~~~dr~~~~~----~~~~~~~----~~~~l~ell~~  193 (315)
T 3pp8_A          128 LWKPLPEYTREEFSVGIMG-AGVLGAKVAESLQA-----WGFPLRCWSRSRKSW----PGVESYV----GREELRAFLNQ  193 (315)
T ss_dssp             CCCCCCCCCSTTCCEEEEC-CSHHHHHHHHHHHT-----TTCCEEEEESSCCCC----TTCEEEE----SHHHHHHHHHT
T ss_pred             ccCCCCCCCcCCCEEEEEe-eCHHHHHHHHHHHH-----CCCEEEEEcCCchhh----hhhhhhc----ccCCHHHHHhh
Confidence            4543322344568999999 89999999999998     899999999976532    2333222    13678889999


Q ss_pred             CCCee
Q 016047           94 LTDVT   98 (396)
Q Consensus        94 ~~~V~   98 (396)
                      +|.|+
T Consensus       194 aDiV~  198 (315)
T 3pp8_A          194 TRVLI  198 (315)
T ss_dssp             CSEEE
T ss_pred             CCEEE
Confidence            99643

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.53  E-value=0.0041  Score=56.89  Aligned_cols=101  Identities=12%  Similarity=-0.010  Sum_probs=63.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------CC-----CCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NA-----DHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~-----~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      +||.|+|| |.+|..++..|....   .|++|+++++++....      ..     .....+...  .|.   .+ ++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~---~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~a   70 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQ---LARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANS   70 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT---CCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC---CCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCC
Confidence            48999997 999999999998621   2789999999764210      00     001111110  222   23 6788


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      |.|+-++...........+++..|+.-.+.+.+.+.+..++.
T Consensus        71 DvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~  112 (310)
T 1guz_A           71 DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNP  112 (310)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            876666442211222356677889999999998888775443

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.49  E-value=0.031  Score=52.48  Aligned_cols=67  Identities=15%  Similarity=0.149  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      ++++|+|.| .|.+|..+++.+.+     .|++|++++..+...... ---+++.+|..|.+.+.++.+.+|.|
T Consensus        11 ~~~~IlIlG-~G~lg~~la~aa~~-----lG~~viv~d~~~~~p~~~-~ad~~~~~~~~d~~~l~~~~~~~dvi   77 (377)
T 3orq_A           11 FGATIGIIG-GGQLGKMMAQSAQK-----MGYKVVVLDPSEDCPCRY-VAHEFIQAKYDDEKALNQLGQKCDVI   77 (377)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESCTTCTTGG-GSSEEEECCTTCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEECCCCChhhh-hCCEEEECCCCCHHHHHHHHHhCCcc
Confidence            457999999 78999999999998     899999998765432110 01146789999999999988888754

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=95.28  E-value=0.0098  Score=50.25  Aligned_cols=37  Identities=27%  Similarity=0.216  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..+++||||||+|-||..+++.+..     .|++|++++|++
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~-----~G~~V~~~~~~~   73 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKM-----IGARIYTTAGSD   73 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHH-----HTCEEEEEESSH
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHH-----cCCEEEEEeCCH
Confidence            4568999999999999999999987     789999999875

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.24  E-value=0.0096  Score=54.35  Aligned_cols=71  Identities=14%  Similarity=0.125  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCC---CC------CCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPK---PN------WNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~---~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      .++++||+|| |-+|+.++..|.+     .|. +|++++|.+.   ..      .....++.+...++.+.+++.+.+..
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~-----~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~  226 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAAL-----DGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE  226 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHH-----TTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHH-----CCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC
Confidence            4689999996 8999999999998     787 8999999832   11      00001233455677777778888888


Q ss_pred             CCCeeEE
Q 016047           94 LTDVTHI  100 (396)
Q Consensus        94 ~~~V~h~  100 (396)
                      +|.|+++
T Consensus       227 aDiIINa  233 (315)
T 3tnl_A          227 SVIFTNA  233 (315)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEC
Confidence            8877776

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.23  E-value=0.061  Score=50.64  Aligned_cols=67  Identities=13%  Similarity=-0.004  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      .+++|+|.| .|.+|..+++.+.+     .|++|++++..+....... --..+..|..|.+.+.+.++.+|.|
T Consensus        13 ~~k~IlIlG-~G~~g~~la~aa~~-----~G~~vi~~d~~~~~~~~~~-ad~~~~~~~~d~~~l~~~~~~~dvI   79 (389)
T 3q2o_A           13 PGKTIGIIG-GGQLGRMMALAAKE-----MGYKIAVLDPTKNSPCAQV-ADIEIVASYDDLKAIQHLAEISDVV   79 (389)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSTTCTTTTT-CSEEEECCTTCHHHHHHHHHTCSEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEeCCCCCchHHh-CCceEecCcCCHHHHHHHHHhCCEe
Confidence            457999999 78899999999998     8999999987654321111 1135678999999999988888754

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.20  E-value=0.016  Score=52.24  Aligned_cols=37  Identities=14%  Similarity=0.248  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |.++|.|.|+||.+|+.++..|.+     .|++|++.+|++.
T Consensus        10 mmm~I~iIG~tG~mG~~la~~l~~-----~g~~V~~~~r~~~   46 (286)
T 3c24_A           10 GPKTVAILGAGGKMGARITRKIHD-----SAHHLAAIEIAPE   46 (286)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHH-----SSSEEEEECCSHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEECCHH
Confidence            447999999889999999999998     7999999998753

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.19  E-value=0.015  Score=51.84  Aligned_cols=68  Identities=16%  Similarity=0.149  Sum_probs=42.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCCCCCCC----CCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRPKPNWN----ADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      +||.|+||+|.+|+.+++.+.+.    .++++.++ +|.+....-    ...++..   ++.-.+++.+++.++|.|+.+
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~----~~~eLv~~~d~~~~~~~G~d~gel~g~~~---gv~v~~dl~~ll~~~DVVIDf   80 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAA----PDATLVGALDRTGSPQLGQDAGAFLGKQT---GVALTDDIERVCAEADYLIDF   80 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHC----TTEEEEEEBCCTTCTTTTSBTTTTTTCCC---SCBCBCCHHHHHHHCSEEEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEEecCcccccccHHHHhCCCC---CceecCCHHHHhcCCCEEEEc
Confidence            69999999999999999999864    57887765 565332100    0001110   221123455566778877776

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=94.83  E-value=0.0062  Score=55.83  Aligned_cols=98  Identities=15%  Similarity=0.097  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCC-----------CCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWN-----------ADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~-----------~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .++|.|+|| |.+|+.++..|..     .|+ +|+++++++.....           ......+...  .|   . ++++
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~-----~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~a~~   71 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGK-----DNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-ADIS   71 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----HTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhC
Confidence            468999997 9999999999998     788 99999987532100           0001111110  12   2 3567


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCC
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  134 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  134 (396)
                      ++|.|+-+++..........+....|....+.+++.+.+..+
T Consensus        72 ~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~  113 (317)
T 2ewd_A           72 GSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP  113 (317)
T ss_dssp             TCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC
Confidence            888777765533322224455566788888888888877654

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=94.79  E-value=0.078  Score=49.31  Aligned_cols=65  Identities=22%  Similarity=0.196  Sum_probs=46.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCC-ChHHHHHHHhcCCCe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVS-DPEETQAKLSQLTDV   97 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~-d~~~~~~~~~~~~~V   97 (396)
                      |+|+|+| .|..|..++..+.+     .|++|++++.++......- --+++..|.. |.+.+....+++|.|
T Consensus         2 K~I~ilG-gg~~g~~~~~~Ak~-----~G~~vv~vd~~~~~~~~~~-aD~~~~~~~~~d~~~~~~~~~~~D~v   67 (363)
T 4ffl_A            2 KTICLVG-GKLQGFEAAYLSKK-----AGMKVVLVDKNPQALIRNY-ADEFYCFDVIKEPEKLLELSKRVDAV   67 (363)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESCTTCTTTTT-SSEEEECCTTTCHHHHHHHHTSSSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCCCChhHhh-CCEEEECCCCcCHHHHHHHhcCCCEE
Confidence            7999999 68999999999988     8999999998765421110 1135566654 566666666777744

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=94.78  E-value=0.031  Score=52.01  Aligned_cols=35  Identities=20%  Similarity=0.320  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      |.++|.|.||||++|..+++.|.+.    ..++|+++.+
T Consensus         7 M~~kV~IiGAtG~iG~~llr~L~~~----p~~ev~~i~~   41 (354)
T 1ys4_A            7 MKIKVGVLGATGSVGQRFVQLLADH----PMFELTALAA   41 (354)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTC----SSEEEEEEEE
T ss_pred             ccceEEEECcCCHHHHHHHHHHhcC----CCCEEEEEEc
Confidence            5579999999999999999999874    3568888875

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=94.73  E-value=0.086  Score=49.51  Aligned_cols=69  Identities=12%  Similarity=0.048  Sum_probs=49.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCee
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVT   98 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~   98 (396)
                      .+.++|||+|+ |.+|..+++.+.+     .|++|++++..+...... .--+++.+|..|.+.+.+.++  ++|.|+
T Consensus         9 ~~~~~ili~g~-g~~~~~~~~a~~~-----~G~~v~~~~~~~~~~~~~-~~d~~~~~~~~d~~~l~~~~~~~~~d~v~   79 (391)
T 1kjq_A            9 PAATRVMLLGS-GELGKEVAIECQR-----LGVEVIAVDRYADAPAMH-VAHRSHVINMLDGDALRRVVELEKPHYIV   79 (391)
T ss_dssp             TTCCEEEEESC-SHHHHHHHHHHHT-----TTCEEEEEESSTTCGGGG-GSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHH-----cCCEEEEEECCCCCchhh-hccceEECCCCCHHHHHHHHHHcCCCEEE
Confidence            45589999985 8999999999998     899999998765431100 011356788889888877665  466443

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=94.66  E-value=0.025  Score=53.95  Aligned_cols=68  Identities=13%  Similarity=0.044  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ++++|+|.| .|.+|..+++.+.+     .|++|++++..+...... ---+.+.+|..|.+.+.++..++|.|+
T Consensus        34 ~~~~IlIlG-~G~lg~~~~~aa~~-----lG~~v~v~d~~~~~p~~~-~ad~~~~~~~~d~~~l~~~a~~~D~V~  101 (419)
T 4e4t_A           34 PGAWLGMVG-GGQLGRMFCFAAQS-----MGYRVAVLDPDPASPAGA-VADRHLRAAYDDEAALAELAGLCEAVS  101 (419)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCTTCHHHH-HSSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCCCcCchhh-hCCEEEECCcCCHHHHHHHHhcCCEEE
Confidence            357999999 68999999999998     899999998654321000 011366789999999999888888654

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=94.66  E-value=0.039  Score=50.59  Aligned_cols=99  Identities=13%  Similarity=0.070  Sum_probs=63.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC------CCC-----CCCeeEEE-ecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------WNA-----DHLVEYVQ-CDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~------~~~-----~~~v~~~~-~Dl~d~~~~~~~~~   92 (396)
                      +||.|+|| |.+|..++..|..     .|+ +|+++++++...      ...     ....++.. .|      . ++++
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~-----~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-~al~   71 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQ-----KNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT------Y-DDLA   71 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC------G-GGGT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCC------H-HHhC
Confidence            58999997 9999999999998     677 899888875321      000     01112211 23      2 4578


Q ss_pred             cCCCeeEEEEeccCCCcc-----HHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           93 QLTDVTHIFYVTWTNRST-----EAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~-----~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      ++|.|+-.++........     ..+....|+.-.+.+.+.+.+..+...
T Consensus        72 ~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~  121 (322)
T 1t2d_A           72 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAF  121 (322)
T ss_dssp             TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence            899777765432211112     455677788888888888887765433

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=94.64  E-value=0.028  Score=50.39  Aligned_cols=36  Identities=19%  Similarity=0.273  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe-CCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA-RRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~-R~~   64 (396)
                      +.+|.|.||+|.+|+.+++.+.+.    .+.++.++. |.+
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~----~~~eLvg~vd~~~   57 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRR----KDVELCAVLVRKG   57 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTC----SSEEEEEEBCCTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEecCC
Confidence            468999999999999999999874    577866664 543

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=94.56  E-value=0.045  Score=49.95  Aligned_cols=98  Identities=13%  Similarity=0.078  Sum_probs=62.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC----C--CC----CCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----W--NA----DHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~----~--~~----~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .++|.|+|| |.+|+.++..|..     .|+  +|++++|++...    .  ..    .....+...  .+.    +++.
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~-----~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~   74 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQ-----RGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICR   74 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----TTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhC
Confidence            469999997 9999999999988     788  999999875211    0  00    001222211  122    2467


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCC
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  134 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  134 (396)
                      ++|.|+-++...........+....|+...+.+++.+.+..+
T Consensus        75 ~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~  116 (319)
T 1lld_A           75 DADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAP  116 (319)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            788666664322222234566778888888888887776543

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=94.49  E-value=0.081  Score=48.39  Aligned_cols=72  Identities=21%  Similarity=0.184  Sum_probs=49.9

Q ss_pred             cccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           14 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        14 ~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      +|+........+++|.|.| .|.||+.+++.|..     .|++|++.+|.+...    ..+...    ....+++++++.
T Consensus       129 ~W~~~~~~~l~g~tvGIIG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~----~~~~~~----~~~~~l~ell~~  194 (324)
T 3hg7_A          129 LWQSHPYQGLKGRTLLILG-TGSIGQHIAHTGKH-----FGMKVLGVSRSGRER----AGFDQV----YQLPALNKMLAQ  194 (324)
T ss_dssp             CCCCCCCCCSTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCCC----TTCSEE----ECGGGHHHHHHT
T ss_pred             CCcCCCCcccccceEEEEE-ECHHHHHHHHHHHh-----CCCEEEEEcCChHHh----hhhhcc----cccCCHHHHHhh
Confidence            4543333344578999999 99999999999998     799999999876432    111111    123467788999


Q ss_pred             CCCeeE
Q 016047           94 LTDVTH   99 (396)
Q Consensus        94 ~~~V~h   99 (396)
                      +|.|+-
T Consensus       195 aDvV~l  200 (324)
T 3hg7_A          195 ADVIVS  200 (324)
T ss_dssp             CSEEEE
T ss_pred             CCEEEE
Confidence            996433

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=94.39  E-value=0.08  Score=49.57  Aligned_cols=66  Identities=15%  Similarity=0.074  Sum_probs=49.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ++|||+|+ |.+|..+++.|.+     .|++|++++..+...... -.-.++.+|..|.+.+.+.+.++|.|+
T Consensus         2 ~~Ililg~-g~~g~~~~~a~~~-----~G~~v~~~~~~~~~~~~~-~~~~~~~~~~~d~~~l~~~~~~~d~v~   67 (380)
T 3ax6_A            2 KKIGIIGG-GQLGKMMTLEAKK-----MGFYVIVLDPTPRSPAGQ-VADEQIVAGFFDSERIEDLVKGSDVTT   67 (380)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESSTTCTTGG-GSSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEeCCCCCchhh-hCceEEECCCCCHHHHHHHHhcCCEEE
Confidence            68999995 8999999999988     799999998754331110 011356789999998888887777544

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=94.30  E-value=0.039  Score=50.51  Aligned_cols=97  Identities=22%  Similarity=0.127  Sum_probs=62.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC--CC--------CCCCeeEEEecCCChHHHHHHHhc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN--WN--------ADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~--~~--------~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      ++|.|+|+ |.+|+.++..|..     .|+  +|+++++++...  ..        ......+. .  .+.    +++++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~-----~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~----~~~~~   67 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLM-----KGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDY----ADLKG   67 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCG----GGGTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----CCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCH----HHhCC
Confidence            48999997 9999999999988     688  999999875311  00        00011222 1  232    24678


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  135 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  135 (396)
                      +|.|+-++...........+....|+...+.+++.+.+..+.
T Consensus        68 aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~  109 (319)
T 1a5z_A           68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPD  109 (319)
T ss_dssp             CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            887666544222122235667788888888998888876543

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=94.29  E-value=0.06  Score=50.98  Aligned_cols=66  Identities=14%  Similarity=0.025  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHhcCCCe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDV   97 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~V   97 (396)
                      .++|+|.| .|.+|..+++.+.+     .|++|++++ .+..... .......+.+|..|.+.+.++.+.+|.|
T Consensus        24 ~~~I~ilG-gG~lg~~l~~aa~~-----lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i   90 (403)
T 3k5i_A           24 SRKVGVLG-GGQLGRMLVESANR-----LNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVV   90 (403)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHH-----HTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEE
Confidence            57999999 68999999999998     899999999 5432211 0112246788999999999998888753

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=94.28  E-value=0.043  Score=49.07  Aligned_cols=66  Identities=14%  Similarity=0.083  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .+++|+|+|+ |-.|+.++..|.+     .|. +|++++|...........+...     ..+++.+++.++|.|+++
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~-----~G~~~v~v~~R~~~~a~~la~~~~~~-----~~~~~~~~~~~aDiVIna  182 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYK-----IVRPTLTVANRTMSRFNNWSLNINKI-----NLSHAESHLDEFDIIINT  182 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHT-----TCCSCCEEECSCGGGGTTCCSCCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHhcccc-----cHhhHHHHhcCCCEEEEC
Confidence            3578999995 8899999999998     788 7999999865421111222221     234566667888877765

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=94.27  E-value=0.041  Score=51.22  Aligned_cols=35  Identities=14%  Similarity=0.215  Sum_probs=29.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+|.|.||+|++|+.+++.|.+.    ...+|+++.++.
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~----p~~elvai~~~~   51 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANH----PHFQVTLMTADR   51 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTC----SSEEEEEEBCST
T ss_pred             cEEEEECcCCHHHHHHHHHHHcC----CCcEEEEEeCch
Confidence            68999999999999999999984    345888887643

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=94.23  E-value=0.039  Score=48.35  Aligned_cols=34  Identities=12%  Similarity=0.192  Sum_probs=28.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      ++|+|.|++|-+|+.+++.+.+.    .+++|.++..+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~----~~~elva~~d~   34 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAA----DDLTLSAELDA   34 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHC----TTCEEEEEECT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEcc
Confidence            37999999999999999998752    48898877654

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=94.15  E-value=0.1  Score=47.67  Aligned_cols=70  Identities=23%  Similarity=0.173  Sum_probs=48.4

Q ss_pred             cccccC-cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCee-EEEecCCChHHHHHHH
Q 016047           14 KFEEDE-PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVE-YVQCDVSDPEETQAKL   91 (396)
Q Consensus        14 ~~~~~~-~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~-~~~~Dl~d~~~~~~~~   91 (396)
                      +|.... .....+++|.|.| .|.||+.+++.|..     .|++|++.+|.+....    .+. ...     ..++.+++
T Consensus       125 ~W~~~~~~~~l~gktvGIiG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~~----~~~~~~~-----~~~l~ell  189 (324)
T 3evt_A          125 QWALPMTTSTLTGQQLLIYG-TGQIGQSLAAKASA-----LGMHVIGVNTTGHPAD----HFHETVA-----FTATADAL  189 (324)
T ss_dssp             CSSCSSCCCCSTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSCCCCT----TCSEEEE-----GGGCHHHH
T ss_pred             CcccCCCCccccCCeEEEEC-cCHHHHHHHHHHHh-----CCCEEEEECCCcchhH----hHhhccc-----cCCHHHHH
Confidence            454332 2344568999999 99999999999998     8999999999764321    111 111     23456778


Q ss_pred             hcCCCee
Q 016047           92 SQLTDVT   98 (396)
Q Consensus        92 ~~~~~V~   98 (396)
                      +.+|.|+
T Consensus       190 ~~aDvV~  196 (324)
T 3evt_A          190 ATANFIV  196 (324)
T ss_dssp             HHCSEEE
T ss_pred             hhCCEEE
Confidence            8888644

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=94.00  E-value=0.029  Score=48.13  Aligned_cols=62  Identities=21%  Similarity=0.108  Sum_probs=42.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .++|.|+| +|.+|+.+++.|.+     .|++|++++|++... .....++...        ++.++++++|.|+.+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~-----~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVG-----SGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence            36899999 99999999999998     789999999975321 0011233331        244567788866654

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=93.93  E-value=0.045  Score=50.75  Aligned_cols=37  Identities=14%  Similarity=0.283  Sum_probs=27.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCC-CCCCCcEEEEEeC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPD-TPGGPWKVYGVAR   62 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~-~~~~g~~V~~l~R   62 (396)
                      ++|+|.||||++|+.|++.|++.+ -++...+|+.+.+
T Consensus        10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s   47 (352)
T 2nqt_A           10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTA   47 (352)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEEC
Confidence            599999999999999999999831 0000247777764

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=93.80  E-value=0.037  Score=50.38  Aligned_cols=101  Identities=15%  Similarity=0.106  Sum_probs=66.4

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC------C-----CCCCCeeEEE-ecCCChHHHHHHHhc
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------W-----NADHLVEYVQ-CDVSDPEETQAKLSQ   93 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~------~-----~~~~~v~~~~-~Dl~d~~~~~~~~~~   93 (396)
                      ||.|+|| |.+|..++..|+.     .++ +|+.++++....      .     ......++.. .|   .    +++++
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~-----~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~----~a~~~   67 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMM-----RGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS---Y----EDMRG   67 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHH-----HTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC---G----GGGTT
T ss_pred             CEEEECc-CHHHHHHHHHHHh-----CCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC---H----HHhCC
Confidence            5899997 9999999998886     455 699999875321      0     0011222222 23   1    35788


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      +|.|+-.++....+.....+....|+.-.+.+++.+.+..+....++
T Consensus        68 aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv  114 (308)
T 2d4a_B           68 SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVI  114 (308)
T ss_dssp             CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            99777765543333335567788899999999999888765444333

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=93.76  E-value=0.052  Score=49.88  Aligned_cols=38  Identities=26%  Similarity=0.314  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ...+++||||||+|-||..++..+..     .|++|++++|++
T Consensus       143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~-----~G~~V~~~~~~~  180 (333)
T 1v3u_A          143 VKGGETVLVSAAAGAVGSVVGQIAKL-----KGCKVVGAAGSD  180 (333)
T ss_dssp             CCSSCEEEEESTTBHHHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence            34568999999999999999999988     789999999864

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=93.71  E-value=0.067  Score=42.51  Aligned_cols=65  Identities=17%  Similarity=0.264  Sum_probs=43.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      +++|+|+| +|.+|..++..|.+     .|++|++.+|++...  +...-++...  +.   +++.+++.++|.|+.+
T Consensus        21 ~~~v~iiG-~G~iG~~~a~~l~~-----~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~---~~~~~~~~~~Divi~a   87 (144)
T 3oj0_A           21 GNKILLVG-NGMLASEIAPYFSY-----PQYKVTVAGRNIDHVRAFAEKYEYEYV--LI---NDIDSLIKNNDVIITA   87 (144)
T ss_dssp             CCEEEEEC-CSHHHHHHGGGCCT-----TTCEEEEEESCHHHHHHHHHHHTCEEE--EC---SCHHHHHHTCSEEEEC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEcCCHHHHHHHHHHhCCceE--ee---cCHHHHhcCCCEEEEe
Confidence            68999999 59999999999998     788899999875431  0000011211  22   2345567788866665

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=93.69  E-value=0.05  Score=48.95  Aligned_cols=61  Identities=18%  Similarity=0.078  Sum_probs=45.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ...+++|.|.| .|.||+.+++.|..     .|++|++.+|.+....    .++       ..++++++++.+|.|+-
T Consensus       119 ~l~g~tvGIIG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~~----~~~-------~~~~l~ell~~aDiV~l  179 (290)
T 3gvx_A          119 LLYGKALGILG-YGGIGRRVAHLAKA-----FGMRVIAYTRSSVDQN----VDV-------ISESPADLFRQSDFVLI  179 (290)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHH-----HTCEEEEECSSCCCTT----CSE-------ECSSHHHHHHHCSEEEE
T ss_pred             eeecchheeec-cCchhHHHHHHHHh-----hCcEEEEEeccccccc----ccc-------ccCChHHHhhccCeEEE
Confidence            34568999999 89999999999998     7999999999764421    111       11246677888886443

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=93.15  E-value=0.082  Score=48.90  Aligned_cols=35  Identities=23%  Similarity=0.255  Sum_probs=29.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ++|.|.||||++|+.+++.|.+.    ...+|+++.++.
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~----p~~elv~v~s~~   39 (345)
T 2ozp_A            5 KTLSIVGASGYAGGEFLRLALSH----PYLEVKQVTSRR   39 (345)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTC----TTEEEEEEBCST
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC----CCcEEEEEECch
Confidence            68999999999999999999873    345888877643

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=92.91  E-value=0.064  Score=49.28  Aligned_cols=37  Identities=16%  Similarity=0.074  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..+++||||||+|-+|..++..+..     .|++|++++|++
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G~~Vi~~~~~~  180 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARH-----LGATVIGTVSTE  180 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence            3467999999999999999999988     789999999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=92.79  E-value=0.06  Score=49.30  Aligned_cols=37  Identities=16%  Similarity=0.025  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..+++||||||+|-+|..++..+..     .|++|++++|++
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G~~V~~~~~~~  175 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKA-----LGAKLIGTVGTA  175 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHH-----HTCEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCH
Confidence            3468999999999999999999987     789999999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=92.77  E-value=0.079  Score=48.88  Aligned_cols=37  Identities=16%  Similarity=0.213  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +.+++|||+||+|-+|..++..+..     .|++|++++|++
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~-----~G~~V~~~~~~~  190 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKM-----MGCYVVGSAGSK  190 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence            4568999999999999999999887     789999999875

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=92.77  E-value=0.074  Score=48.62  Aligned_cols=35  Identities=26%  Similarity=0.320  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |.++|+|.| +|-+|+.++..|.+     .|++|+.++|++
T Consensus         1 M~mkI~IiG-aGaiG~~~a~~L~~-----~g~~V~~~~r~~   35 (320)
T 3i83_A            1 MSLNILVIG-TGAIGSFYGALLAK-----TGHCVSVVSRSD   35 (320)
T ss_dssp             --CEEEEES-CCHHHHHHHHHHHH-----TTCEEEEECSTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHh-----CCCeEEEEeCCh
Confidence            567999998 89999999999998     799999999975

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=92.75  E-value=0.072  Score=48.45  Aligned_cols=36  Identities=22%  Similarity=0.201  Sum_probs=32.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      .++|.|.| .|.+|..++..|.+     .||+|++.+|++..
T Consensus        21 m~~I~iIG-~G~mG~~~A~~l~~-----~G~~V~~~dr~~~~   56 (310)
T 3doj_A           21 MMEVGFLG-LGIMGKAMSMNLLK-----NGFKVTVWNRTLSK   56 (310)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSGGG
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHH-----CCCeEEEEeCCHHH
Confidence            37999998 89999999999998     79999999998643

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=92.74  E-value=0.097  Score=48.49  Aligned_cols=38  Identities=24%  Similarity=0.264  Sum_probs=33.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ..+++|||+||+|-+|..++..+..     .|++|++++|++.
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~-----~Ga~Vi~~~~~~~  206 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARA-----YGLKILGTAGTEE  206 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHH-----CCCEEEEEeCChh
Confidence            4467999999999999999999987     7899999998753

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=92.73  E-value=0.2  Score=47.76  Aligned_cols=68  Identities=13%  Similarity=0.042  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--cCCCee
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--QLTDVT   98 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~~V~   98 (396)
                      +.++|||+|+ |.+|..+++.|.+     .|++|++++..+...... .--+.+.+|..|.+.+.+.++  ++|.|+
T Consensus        18 ~~~~ili~g~-g~~g~~~~~a~~~-----~G~~v~~v~~~~~~~~~~-~ad~~~~~~~~d~~~l~~~~~~~~~d~V~   87 (433)
T 2dwc_A           18 SAQKILLLGS-GELGKEIAIEAQR-----LGVEVVAVDRYANAPAMQ-VAHRSYVGNMMDKDFLWSVVEREKPDAII   87 (433)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHH-----TTCEEEEEESSTTCHHHH-HSSEEEESCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEECCCCChhhh-hcceEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            4579999996 8999999999998     899999998765431000 011356788889888877765  566443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=92.72  E-value=0.016  Score=54.50  Aligned_cols=73  Identities=14%  Similarity=0.055  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ..+++|+|+|+ |-+|..+++.|..     .|.+|++++|++...  ....-+.. +..+..+.+++.+.+.++|.|+.+
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~-----~Ga~V~~~d~~~~~l~~~~~~~g~~-~~~~~~~~~~l~~~l~~aDvVi~~  238 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANG-----MGATVTVLDINIDKLRQLDAEFCGR-IHTRYSSAYELEGAVKRADLVIGA  238 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTTTS-SEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHhcCCe-eEeccCCHHHHHHHHcCCCEEEEC
Confidence            34689999997 9999999999988     789999999875321  00000111 123444566788888899988776


Q ss_pred             EE
Q 016047          101 FY  102 (396)
Q Consensus       101 a~  102 (396)
                      ++
T Consensus       239 ~~  240 (377)
T 2vhw_A          239 VL  240 (377)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=92.65  E-value=0.015  Score=54.31  Aligned_cols=72  Identities=14%  Similarity=0.027  Sum_probs=49.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      +++|+|+|+ |-+|..++..|..     .|.+|++++|++.... ........+..+..+.+++.+.+.++|.|+++.+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~-----~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~  239 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVG-----LGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVL  239 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCC
Confidence            479999998 9999999999998     7889999999754210 0000000111222355677778888998888754

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=92.64  E-value=0.084  Score=48.50  Aligned_cols=39  Identities=26%  Similarity=0.383  Sum_probs=33.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .+.+++|||+||+|-||..++..+..     .|.+|++++|++.
T Consensus       147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~  185 (336)
T 4b7c_A          147 PKNGETVVISGAAGAVGSVAGQIARL-----KGCRVVGIAGGAE  185 (336)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCHH
Confidence            44568999999999999999998887     7899999998753

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=92.63  E-value=0.16  Score=48.63  Aligned_cols=88  Identities=14%  Similarity=0.035  Sum_probs=55.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc---EEEEEeCCCCCCC-CCCCCeeEEEecCCCh---HHHHHHHhcCCCe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW---KVYGVARRPKPNW-NADHLVEYVQCDVSDP---EETQAKLSQLTDV   97 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~---~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~---~~~~~~~~~~~~V   97 (396)
                      +++|+|.| .|-||+.+++.|.++    .++   +|++.+....... ....++++...++.+.   +.+.+++++.|.|
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~----~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV   87 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEK----FDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL   87 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHH----BCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhC----CCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence            46899999 999999999999874    233   5887876543221 0112456666666443   3355567666667


Q ss_pred             eEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccC
Q 016047           98 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNA  133 (396)
Q Consensus        98 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~  133 (396)
                      ++++   ... .            ...++++|.+++
T Consensus        88 IN~s---~~~-~------------~l~Im~acleaG  107 (480)
T 2ph5_A           88 IDVS---IGI-S------------SLALIILCNQKG  107 (480)
T ss_dssp             EECC---SSS-C------------HHHHHHHHHHHT
T ss_pred             EECC---ccc-c------------CHHHHHHHHHcC
Confidence            7642   111 1            113789999875

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=92.61  E-value=0.096  Score=48.30  Aligned_cols=36  Identities=28%  Similarity=0.287  Sum_probs=26.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   61 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~   61 (396)
                      |.++|+|.||||++|+.|++.|.+...  ...+++++.
T Consensus         5 m~~kV~IiGAtG~iG~~llr~L~~~~~--~~~elv~i~   40 (340)
T 2hjs_A            5 QPLNVAVVGATGSVGEALVGLLDERDF--PLHRLHLLA   40 (340)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTC--CCSCEEEEE
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCC--CcEEEEEEe
Confidence            456899999999999999999985211  123566664

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=92.59  E-value=0.13  Score=45.12  Aligned_cols=34  Identities=24%  Similarity=0.213  Sum_probs=29.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      +++|+|.| .|-+|+.+++.|..     .|. +|++++++.
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~-----~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLAS-----AGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHH-----HTCSEEEEECCCB
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHH-----cCCCeEEEEcCCC
Confidence            47999999 68899999999998     676 799899875

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=92.54  E-value=0.019  Score=52.00  Aligned_cols=69  Identities=12%  Similarity=0.030  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC--CCC--CCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN--WNA--DHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~--~~~--~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ..++|+|+|+ |-+|+.++..|.+     .|. +|++++|.+...  ...  .....    ++.+.+++.+.+.++|.|+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~-----~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivI  209 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLS-----TAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIII  209 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHT-----TTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHH-----CCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEE
Confidence            4579999996 7899999999998     787 899999975321  000  00000    1223345667778888777


Q ss_pred             EEEE
Q 016047           99 HIFY  102 (396)
Q Consensus        99 h~a~  102 (396)
                      ++..
T Consensus       210 n~t~  213 (297)
T 2egg_A          210 NTTS  213 (297)
T ss_dssp             ECSC
T ss_pred             ECCC
Confidence            7743

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=92.50  E-value=0.082  Score=50.81  Aligned_cols=35  Identities=20%  Similarity=0.080  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |.++|.|.| +|++|..++..|.+     .||+|++++|++
T Consensus         1 M~mkI~VIG-~G~vG~~lA~~La~-----~G~~V~~~D~~~   35 (450)
T 3gg2_A            1 MSLDIAVVG-IGYVGLVSATCFAE-----LGANVRCIDTDR   35 (450)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHh-----cCCEEEEEECCH
Confidence            457999999 79999999999998     799999999975

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=92.35  E-value=0.058  Score=49.05  Aligned_cols=71  Identities=11%  Similarity=0.092  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCC---C------CCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKP---N------WNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~---~------~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      .++++||+|| |-.|+.++..|.+     .|. +|+++.|.+..   .      .....+..+...++.+.+.+.+.+.+
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~-----~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~  220 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAI-----EGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS  220 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHH-----TTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHH-----cCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC
Confidence            4689999996 8899999999998     787 79999998321   1      00001223344566554444556777


Q ss_pred             CCCeeEE
Q 016047           94 LTDVTHI  100 (396)
Q Consensus        94 ~~~V~h~  100 (396)
                      +|.|+++
T Consensus       221 ~DiIINa  227 (312)
T 3t4e_A          221 ADILTNG  227 (312)
T ss_dssp             CSEEEEC
T ss_pred             ceEEEEC
Confidence            7766665

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=92.33  E-value=0.1  Score=47.02  Aligned_cols=37  Identities=22%  Similarity=0.090  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      |.++|.|.| .|.+|..++..|.+     .||+|++.+|++..
T Consensus        14 ~~~~I~vIG-~G~mG~~~A~~l~~-----~G~~V~~~dr~~~~   50 (296)
T 3qha_A           14 EQLKLGYIG-LGNMGAPMATRMTE-----WPGGVTVYDIRIEA   50 (296)
T ss_dssp             -CCCEEEEC-CSTTHHHHHHHHTT-----STTCEEEECSSTTT
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHH-----CCCeEEEEeCCHHH
Confidence            356899999 89999999999999     89999999998754

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=92.26  E-value=0.097  Score=48.67  Aligned_cols=24  Identities=29%  Similarity=0.468  Sum_probs=21.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPL   47 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~   47 (396)
                      |+.+|.|.||||++|..|++.|.+
T Consensus         1 m~~kVaIvGATG~vG~eLlrlL~~   24 (366)
T 3pwk_A            1 MGYTVAVVGATGAVGAQMIKMLEE   24 (366)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHT
T ss_pred             CCcEEEEECCCChHHHHHHHHHhc
Confidence            567999999999999999999888

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=92.21  E-value=0.1  Score=48.34  Aligned_cols=38  Identities=16%  Similarity=0.014  Sum_probs=33.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ..+++|||+||+|-||..++..+..     .|.+|++++|++.
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~-----~Ga~Vi~~~~~~~  198 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRM-----AGAIPLVTAGSQK  198 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHH-----cCCEEEEEeCCHH
Confidence            3467999999999999999999987     7899999998753

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=92.21  E-value=0.073  Score=48.15  Aligned_cols=39  Identities=21%  Similarity=0.290  Sum_probs=29.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      ..|.+||-++| .|..|..+++.|++     .||+|++.+|++..
T Consensus         2 ~~Ms~kIgfIG-LG~MG~~mA~~L~~-----~G~~V~v~dr~~~~   40 (297)
T 4gbj_A            2 NAMSEKIAFLG-LGNLGTPIAEILLE-----AGYELVVWNRTASK   40 (297)
T ss_dssp             --CCCEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEC------
T ss_pred             CCCCCcEEEEe-cHHHHHHHHHHHHH-----CCCeEEEEeCCHHH
Confidence            46888999999 99999999999999     89999999998754

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=92.19  E-value=0.1  Score=47.42  Aligned_cols=96  Identities=18%  Similarity=0.004  Sum_probs=59.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC--C---------CCCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN--W---------NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~--~---------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ++|.|+| +|.+|+.++..|.+     .|  ++|++++|++...  .         .....+.....|   .    +++.
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~-----~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~   68 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIA-----QGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALA   68 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----HTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhC
Confidence            5899999 89999999999987     67  7999999975321  0         000122322222   2    3467


Q ss_pred             cCCCeeEEEEeccC----CCccHHHHHHhHHHHHHHHHHHHcccCC
Q 016047           93 QLTDVTHIFYVTWT----NRSTEAENCKINGSMFRNVLRAVIPNAP  134 (396)
Q Consensus        93 ~~~~V~h~a~~~~~----~~~~~~~~~~~nv~gt~~ll~a~~~~~~  134 (396)
                      ++|.|+-++.....    +.....+....|+.-.+.+++.+.+..+
T Consensus        69 ~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~  114 (309)
T 1hyh_A           69 DADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF  114 (309)
T ss_dssp             TCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            88866665432221    1112334567788888888888877654

>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}

Probab=92.09  E-value=0.22  Score=46.25  Aligned_cols=64  Identities=19%  Similarity=-0.022  Sum_probs=46.2

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      +|||+| +|.+|..+++.|.+     .|++|++++..+......... . +..|..|.+.+.+...++|.|+
T Consensus         1 ~iliiG-~g~~g~~~~~a~~~-----~G~~v~~~~~~~~~~~~~~a~-~-~~~~~~d~~~l~~~~~~~d~v~   64 (369)
T 3aw8_A            1 MIGILG-GGQLGRMLALAGYP-----LGLSFRFLDPSPEACAGQVGE-L-VVGEFLDEGALLRFAEGLALVT   64 (369)
T ss_dssp             CEEEEC-CSHHHHHHHHHHTT-----BTCCEEEEESCTTCGGGGTSE-E-EECCTTCHHHHHHHHTTCSEEE
T ss_pred             CEEEEC-CCHHHHHHHHHHHH-----cCCEEEEEeCCCCChHHHhhc-e-EecCCCCHHHHHHHHhCCCEEE
Confidence            589999 68999999999988     799999988654321111011 2 5788899998888777777543

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=92.06  E-value=0.11  Score=47.30  Aligned_cols=36  Identities=19%  Similarity=0.085  Sum_probs=33.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~   64 (396)
                      +|.++|.|.| +|.+|..++..|.+     .| ++|++.+|++
T Consensus        22 ~M~m~IgvIG-~G~mG~~lA~~L~~-----~G~~~V~~~dr~~   58 (317)
T 4ezb_A           22 SMMTTIAFIG-FGEAAQSIAGGLGG-----RNAARLAAYDLRF   58 (317)
T ss_dssp             TSCCEEEEEC-CSHHHHHHHHHHHT-----TTCSEEEEECGGG
T ss_pred             ccCCeEEEEC-ccHHHHHHHHHHHH-----cCCCeEEEEeCCC
Confidence            4678999999 89999999999999     79 9999999975

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=91.98  E-value=0.26  Score=44.61  Aligned_cols=96  Identities=14%  Similarity=0.031  Sum_probs=63.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCC-------CCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNW-------NADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      +||.|+|| |.+|+.++..|+.     +|+  +|+.++++.....       ...+++.. ..|      . ++++++|.
T Consensus        15 ~kV~ViGa-G~vG~~~a~~l~~-----~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t~d------~-~~l~~aD~   80 (303)
T 2i6t_A           15 NKITVVGG-GELGIACTLAISA-----KGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-SKD------L-SASAHSKV   80 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HTCCSEEEEECCC-----CHHHHHHHTCTTEEE-ESC------G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-eCC------H-HHHCCCCE
Confidence            68999995 9999999999987     677  8999998764110       01123333 223      2 45788997


Q ss_pred             eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      |+-.++.. .+.....+....|+.-.+.+++.+.+..+..
T Consensus        81 Vi~aag~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a  119 (303)
T 2i6t_A           81 VIFTVNSL-GSSQSYLDVVQSNVDMFRALVPALGHYSQHS  119 (303)
T ss_dssp             EEECCCC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             EEEcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            77766542 2222456677889999999999888876443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=91.96  E-value=0.1  Score=47.48  Aligned_cols=75  Identities=16%  Similarity=0.049  Sum_probs=50.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCee-EEEecCCChHHHHHHHhcCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVE-YVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~-~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      ...+++++|.|++..+|..+++.|+.     .|..|+.++|+....     ... ...+ ......++++++.+.+..+|
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~-----~gAtVtv~nR~~~~l~~ra~~la-~~~~~~t~~~~t~~~~L~e~l~~AD  247 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLAN-----DGATVYSVDVNNIQKFTRGESLK-LNKHHVEDLGEYSEDLLKKCSLDSD  247 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHT-----TSCEEEEECSSEEEEEESCCCSS-CCCCEEEEEEECCHHHHHHHHHHCS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHH-----CCCEEEEEeCchHHHHhHHHHHh-hhcccccccccccHhHHHHHhccCC
Confidence            34568999999888999999999998     788999998863211     001 1111 11111134578899999999


Q ss_pred             CeeEEEE
Q 016047           96 DVTHIFY  102 (396)
Q Consensus        96 ~V~h~a~  102 (396)
                      .|+...+
T Consensus       248 IVIsAtg  254 (320)
T 1edz_A          248 VVITGVP  254 (320)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            7766533

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=91.91  E-value=0.13  Score=45.84  Aligned_cols=35  Identities=17%  Similarity=-0.011  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+++++|+|+ |-+|+.++..|.+     .|.+|++++|+.
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~-----~G~~V~v~~R~~  152 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLS-----LDCAVTITNRTV  152 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----cCCEEEEEECCH
Confidence            3579999997 7799999999998     788999999874

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=91.89  E-value=0.11  Score=47.11  Aligned_cols=33  Identities=27%  Similarity=0.363  Sum_probs=30.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ++|+|.| .|.+|+.++..|.+     .|++|++++|++
T Consensus         4 m~i~iiG-~G~~G~~~a~~l~~-----~g~~V~~~~r~~   36 (316)
T 2ew2_A            4 MKIAIAG-AGAMGSRLGIMLHQ-----GGNDVTLIDQWP   36 (316)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHh-----CCCcEEEEECCH
Confidence            6899999 59999999999998     799999999975

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=91.85  E-value=0.12  Score=48.00  Aligned_cols=34  Identities=18%  Similarity=0.299  Sum_probs=31.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      ++||||||+|-||..++..+..     .|+ +|++++|++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~-----~Ga~~Vi~~~~~~  196 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHF-----LGCSRVVGICGTH  196 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHH-----TTCSEEEEEESCH
T ss_pred             cEEEEECCCcHHHHHHHHHHHH-----CCCCeEEEEeCCH
Confidence            7999999999999999999987     788 999999875

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=91.78  E-value=0.093  Score=48.23  Aligned_cols=34  Identities=21%  Similarity=0.279  Sum_probs=28.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      ++|.|.||||++|..|++.|.+.    ..+++..+..+
T Consensus         5 ~kv~IvGatG~vG~~l~~~L~~~----p~~el~~l~s~   38 (337)
T 3dr3_A            5 LNTLIVGASGYAGAELVTYVNRH----PHMNITALTVS   38 (337)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHC----TTEEEEEEEEE
T ss_pred             eEEEEECCCChHHHHHHHHHHhC----CCCcEEEEEec
Confidence            68999999999999999999874    35687777643

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=91.71  E-value=0.13  Score=45.87  Aligned_cols=34  Identities=24%  Similarity=0.288  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |+|.|.|+ |.+|+.++..|.+     .|++|++++|++.
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~-----~g~~V~~~~r~~~   34 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCK-----QGHEVQGWLRVPQ   34 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSSCC
T ss_pred             CeEEEECc-CHHHHHHHHHHHh-----CCCCEEEEEcCcc
Confidence            47999995 9999999999998     7999999999764

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=91.70  E-value=0.1  Score=47.08  Aligned_cols=73  Identities=15%  Similarity=0.091  Sum_probs=47.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      +.+++|||+||+|-+|..++..+..     .|.+|+++++++..... ..-+.+. ..|..+.+++.+.+.++|.|+. +
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~-----~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~d~vid-~  196 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARA-----MGLRVLAAASRPEKLALPLALGAEE-AATYAEVPERAKAWGGLDLVLE-V  196 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHH-----TTCEEEEEESSGGGSHHHHHTTCSE-EEEGGGHHHHHHHTTSEEEEEE-C
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHhcCCCE-EEECCcchhHHHHhcCceEEEE-C
Confidence            3467999999999999999998887     78899999987543200 0012222 2455441334444566776666 5


Q ss_pred             E
Q 016047          102 Y  102 (396)
Q Consensus       102 ~  102 (396)
                      +
T Consensus       197 g  197 (302)
T 1iz0_A          197 R  197 (302)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=91.70  E-value=0.12  Score=47.59  Aligned_cols=38  Identities=16%  Similarity=0.027  Sum_probs=33.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      +.+++|||+||+|-+|..++..+..     .|++|++++|++.
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~-----~G~~Vi~~~~~~~  202 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKL-----FGARVIATAGSED  202 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCEEEEEeCCHH
Confidence            3467999999999999999999987     7899999998653

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=91.68  E-value=0.17  Score=45.93  Aligned_cols=58  Identities=22%  Similarity=0.141  Sum_probs=43.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ..+++|.|.| .|.||+.+++.|..     .|++|++.+|.+...     .     .+.   .++.++++.+|.|+-
T Consensus       142 l~g~~vgIIG-~G~IG~~~A~~l~~-----~G~~V~~~d~~~~~~-----~-----~~~---~~l~ell~~aDvV~l  199 (311)
T 2cuk_A          142 LQGLTLGLVG-MGRIGQAVAKRALA-----FGMRVVYHARTPKPL-----P-----YPF---LSLEELLKEADVVSL  199 (311)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCSS-----S-----SCB---CCHHHHHHHCSEEEE
T ss_pred             CCCCEEEEEE-ECHHHHHHHHHHHH-----CCCEEEEECCCCccc-----c-----ccc---CCHHHHHhhCCEEEE
Confidence            4568999999 89999999999998     799999999876432     1     222   235667888886443

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=91.63  E-value=0.1  Score=51.71  Aligned_cols=70  Identities=11%  Similarity=0.043  Sum_probs=53.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCC-CeeEEEecCCChHHHHHH-HhcCCCe
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADH-LVEYVQCDVSDPEETQAK-LSQLTDV   97 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~-~v~~~~~Dl~d~~~~~~~-~~~~~~V   97 (396)
                      ..++++|+|.| .|-+|..+++.|.+     .|++|++++.++... ..... ++.++.||.++++.++++ +..++.|
T Consensus       124 ~~~~~hviI~G-~g~~g~~la~~L~~-----~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~v  196 (565)
T 4gx0_A          124 DDTRGHILIFG-IDPITRTLIRKLES-----RNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSI  196 (565)
T ss_dssp             TTCCSCEEEES-CCHHHHHHHHHTTT-----TTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEE
T ss_pred             cccCCeEEEEC-CChHHHHHHHHHHH-----CCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEE
Confidence            45667999999 68899999999998     799999999876421 00113 788999999999988764 4445543

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=91.58  E-value=0.2  Score=49.55  Aligned_cols=62  Identities=19%  Similarity=0.255  Sum_probs=49.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHH-HhcCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAK-LSQLTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~   96 (396)
                      ++|+|.| .|-+|.++++.|.+     .|++|+++++++.....   -..++.||.+|++.++++ +..+|.
T Consensus       349 ~~viIiG-~G~~G~~la~~L~~-----~g~~v~vid~d~~~~~~---~~~~i~gD~t~~~~L~~agi~~ad~  411 (565)
T 4gx0_A          349 ELIFIIG-HGRIGCAAAAFLDR-----KPVPFILIDRQESPVCN---DHVVVYGDATVGQTLRQAGIDRASG  411 (565)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEESSCCSSCC---SSCEEESCSSSSTHHHHHTTTSCSE
T ss_pred             CCEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEECChHHHhh---cCCEEEeCCCCHHHHHhcCccccCE
Confidence            7899999 59999999999998     89999999998765321   127999999999988663 334443

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=91.54  E-value=0.19  Score=46.55  Aligned_cols=33  Identities=21%  Similarity=0.367  Sum_probs=28.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   61 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~   61 (396)
                      ..+|.|.||+|++|..+++.|.+.    ...+|+++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~----p~~elvai~   36 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKH----PYLELVKVS   36 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTC----SSEEEEEEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhC----CCcEEEEEe
Confidence            368999999999999999999874    346888885

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=91.46  E-value=0.085  Score=48.01  Aligned_cols=35  Identities=26%  Similarity=0.221  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |.++|+|.| +|-+|+.++..|.+     .|++|++++|++
T Consensus         1 M~mkI~IiG-aGaiG~~~a~~L~~-----~g~~V~~~~r~~   35 (312)
T 3hn2_A            1 MSLRIAIVG-AGALGLYYGALLQR-----SGEDVHFLLRRD   35 (312)
T ss_dssp             ---CEEEEC-CSTTHHHHHHHHHH-----TSCCEEEECSTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHH-----CCCeEEEEEcCc
Confidence            557899998 79999999999998     789999999975

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=91.42  E-value=0.16  Score=44.46  Aligned_cols=37  Identities=30%  Similarity=0.291  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      +.++|.|.| +|.+|+.++..|.+     .||+|++.+|++..
T Consensus        18 ~~~kIgiIG-~G~mG~alA~~L~~-----~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           18 QGMKIAVLG-TGTVGRTMAGALAD-----LGHEVTIGTRDPKA   54 (245)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESCHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCChhh
Confidence            457999998 99999999999998     79999999998653

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=91.40  E-value=0.17  Score=46.56  Aligned_cols=60  Identities=12%  Similarity=-0.074  Sum_probs=44.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ..+|+|.|.| .|.||+.+++.|..     .|++|++.+|.+...    .....       ..++.++++.+|.|+-
T Consensus       169 l~gktiGIIG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~----~~~~~-------~~sl~ell~~aDvVil  228 (340)
T 4dgs_A          169 PKGKRIGVLG-LGQIGRALASRAEA-----FGMSVRYWNRSTLSG----VDWIA-------HQSPVDLARDSDVLAV  228 (340)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEECSSCCTT----SCCEE-------CSSHHHHHHTCSEEEE
T ss_pred             ccCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEcCCcccc----cCcee-------cCCHHHHHhcCCEEEE
Confidence            4468999999 79999999999998     899999999876542    11111       1246678888986443

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=91.34  E-value=0.13  Score=47.50  Aligned_cols=38  Identities=24%  Similarity=0.264  Sum_probs=33.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      +.+++|||+||+|-+|...+..+..     .|.+|+++++++.
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~-----~Ga~Vi~~~~~~~  195 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKG-----MGAKVIAVVNRTA  195 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSGG
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----cCCEEEEEeCCHH
Confidence            4567999999999999999998887     7899999998754

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=91.20  E-value=0.06  Score=50.22  Aligned_cols=72  Identities=18%  Similarity=0.094  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-C-CCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-A-DHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~-~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      .+.+|||+|+ |-+|..++..+..     .|.+|+++++++..... . .-+.+. ..|..+.+.+.+...++|.|+.++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~-----~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~  259 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKA-----FGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTV  259 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECC
Confidence            4579999996 9999999998887     78899999987543100 0 112222 346667666666555666666664


Q ss_pred             E
Q 016047          102 Y  102 (396)
Q Consensus       102 ~  102 (396)
                      +
T Consensus       260 g  260 (366)
T 1yqd_A          260 S  260 (366)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=91.12  E-value=0.17  Score=43.04  Aligned_cols=34  Identities=15%  Similarity=0.212  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .++|.|.| +|.+|+.++..|.+     .|++|++.+|++
T Consensus        19 ~~~I~iiG-~G~mG~~la~~l~~-----~g~~V~~~~~~~   52 (209)
T 2raf_A           19 GMEITIFG-KGNMGQAIGHNFEI-----AGHEVTYYGSKD   52 (209)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECTTC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEcCCH
Confidence            46899999 89999999999998     799999998864

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=91.08  E-value=0.15  Score=46.77  Aligned_cols=60  Identities=20%  Similarity=0.105  Sum_probs=43.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ..+++|.|.| .|.||+.+++.|..     .|++|++.+|.+...    .++..  .     .++.++++.+|.|+-
T Consensus       162 l~g~~vgIIG-~G~iG~~vA~~l~~-----~G~~V~~~dr~~~~~----~g~~~--~-----~~l~ell~~aDvVil  221 (333)
T 3ba1_A          162 FSGKRVGIIG-LGRIGLAVAERAEA-----FDCPISYFSRSKKPN----TNYTY--Y-----GSVVELASNSDILVV  221 (333)
T ss_dssp             CTTCCEEEEC-CSHHHHHHHHHHHT-----TTCCEEEECSSCCTT----CCSEE--E-----SCHHHHHHTCSEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEECCCchhc----cCcee--c-----CCHHHHHhcCCEEEE
Confidence            3457899999 79999999999998     799999999876532    12221  1     135567888886443

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=91.05  E-value=0.33  Score=43.48  Aligned_cols=55  Identities=20%  Similarity=0.117  Sum_probs=44.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHH--HHHhcCCCeeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ--AKLSQLTDVTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~--~~~~~~~~V~h~  100 (396)
                      ..+++++|.|++|.+|+.++..|++     .|..|+.+.|+..                    ++.  +.++.+|.|+..
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~-----~gAtVtv~~~~T~--------------------~l~l~~~~~~ADIVI~A  217 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMK-----ENATVTIVHSGTS--------------------TEDMIDYLRTADIVIAA  217 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTTSC--------------------HHHHHHHHHTCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCCC--------------------CchhhhhhccCCEEEEC
Confidence            3568999999999999999999998     7889998877431                    234  788889977665


Q ss_pred             EE
Q 016047          101 FY  102 (396)
Q Consensus       101 a~  102 (396)
                      .+
T Consensus       218 vg  219 (300)
T 4a26_A          218 MG  219 (300)
T ss_dssp             SC
T ss_pred             CC
Confidence            43

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=90.95  E-value=0.12  Score=46.95  Aligned_cols=46  Identities=15%  Similarity=0.128  Sum_probs=32.9

Q ss_pred             cccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           14 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        14 ~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .|+..++.....++|.|.| +|.+|+.++..|.+     .|++|++.+|++.
T Consensus        19 ~~~~~~~~~~~~~~I~iIG-~G~mG~~~a~~l~~-----~g~~V~~~~~~~~   64 (316)
T 2uyy_A           19 YFQSMGSITPTDKKIGFLG-LGLMGSGIVSNLLK-----MGHTVTVWNRTAE   64 (316)
T ss_dssp             ------CCCCCSSCEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSGG
T ss_pred             eecCCCCCCCCCCeEEEEc-ccHHHHHHHHHHHh-----CCCEEEEEeCCHH
Confidence            4554444333347899999 79999999999998     7899999998754

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=90.93  E-value=0.14  Score=47.30  Aligned_cols=62  Identities=13%  Similarity=-0.050  Sum_probs=44.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ..+++|.|.| .|.||+.+++.|..     .|++|++.+|.+...... .++.+  .     ++++++++.+|.|+
T Consensus       171 l~gktvGIIG-lG~IG~~vA~~l~~-----~G~~V~~~dr~~~~~~~~-~g~~~--~-----~~l~ell~~sDvV~  232 (345)
T 4g2n_A          171 LTGRRLGIFG-MGRIGRAIATRARG-----FGLAIHYHNRTRLSHALE-EGAIY--H-----DTLDSLLGASDIFL  232 (345)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHT-----TTCEEEEECSSCCCHHHH-TTCEE--C-----SSHHHHHHTCSEEE
T ss_pred             cCCCEEEEEE-eChhHHHHHHHHHH-----CCCEEEEECCCCcchhhh-cCCeE--e-----CCHHHHHhhCCEEE
Confidence            3468999999 89999999999998     899999999875321000 12221  1     24677788888643

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=90.92  E-value=0.25  Score=44.65  Aligned_cols=60  Identities=18%  Similarity=0.200  Sum_probs=43.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ...+++|.|.| .|.||+.+++.|..     .|++|++.+|.+. .    .+       .....++.++++.+|.|+-
T Consensus       121 ~l~g~~vgIIG-~G~IG~~~A~~l~~-----~G~~V~~~dr~~~-~----~~-------~~~~~~l~ell~~aDvV~l  180 (303)
T 1qp8_A          121 LIQGEKVAVLG-LGEIGTRVGKILAA-----LGAQVRGFSRTPK-E----GP-------WRFTNSLEEALREARAAVC  180 (303)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHH-----TTCEEEEECSSCC-C----SS-------SCCBSCSHHHHTTCSEEEE
T ss_pred             CCCCCEEEEEc-cCHHHHHHHHHHHH-----CCCEEEEECCCcc-c----cC-------cccCCCHHHHHhhCCEEEE
Confidence            34568999999 89999999999998     7999999998754 1    11       1112235567888886433

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=90.89  E-value=0.19  Score=46.37  Aligned_cols=60  Identities=22%  Similarity=0.359  Sum_probs=44.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      .+++|.|.| .|.||+.+++.|..     .|++|++.+|.+....  ...+.+.        +++++++.+|.|+-
T Consensus       147 ~gktvgIiG-lG~IG~~vA~~l~~-----~G~~V~~~d~~~~~~~--~~~~~~~--------~l~ell~~aDvV~l  206 (343)
T 2yq5_A          147 YNLTVGLIG-VGHIGSAVAEIFSA-----MGAKVIAYDVAYNPEF--EPFLTYT--------DFDTVLKEADIVSL  206 (343)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCGGG--TTTCEEC--------CHHHHHHHCSEEEE
T ss_pred             CCCeEEEEe-cCHHHHHHHHHHhh-----CCCEEEEECCChhhhh--hcccccc--------CHHHHHhcCCEEEE
Confidence            468999999 89999999999998     7999999999865421  1122221        45677888886433

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=90.84  E-value=0.37  Score=44.78  Aligned_cols=34  Identities=21%  Similarity=0.182  Sum_probs=24.9

Q ss_pred             CEEEEEcCCChhHHHHHH-HcCCCCCCCCCcEEEEEe
Q 016047           26 SVALIVGVTGIVGNSLAE-ILPLPDTPGGPWKVYGVA   61 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~-~L~~~~~~~~g~~V~~l~   61 (396)
                      ++|.|.||||++|..|++ .|.+.+.+  ..++..++
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~--~~~l~~~s   35 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFD--LIEPVFFS   35 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGG--GSEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCC--ceEEEEEe
Confidence            479999999999999999 66663211  13666665

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=90.82  E-value=0.15  Score=45.94  Aligned_cols=36  Identities=19%  Similarity=0.341  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |.++|.|.| +|.+|..++..|.+     .|++|++++|++.
T Consensus         4 M~m~i~iiG-~G~~G~~~a~~l~~-----~g~~V~~~~~~~~   39 (299)
T 1vpd_A            4 MTMKVGFIG-LGIMGKPMSKNLLK-----AGYSLVVSDRNPE   39 (299)
T ss_dssp             --CEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             ccceEEEEC-chHHHHHHHHHHHh-----CCCEEEEEeCCHH
Confidence            557999999 89999999999998     7899999998753

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=90.82  E-value=0.28  Score=45.62  Aligned_cols=66  Identities=15%  Similarity=0.042  Sum_probs=38.1

Q ss_pred             CEEEEEcCCChhHHHHHHH-cCCCCCCCCCc---EEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEI-LPLPDTPGGPW---KVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~-L~~~~~~~~g~---~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ++|.|.||||++|+.|+++ |.+     .++   +|+.+..++... ...-.+.+....|+.+++.    +.++|.||-+
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~-----~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~----~~~~DvVf~a   72 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEE-----RDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA----LKALDIIVTC   72 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT-----TGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH----HHTCSEEEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhc-----CCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHH----hcCCCEEEEC
Confidence            5899999999999999994 544     332   566666543211 1000011222334444443    4678876655

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=90.79  E-value=0.25  Score=46.14  Aligned_cols=39  Identities=18%  Similarity=0.265  Sum_probs=25.8

Q ss_pred             cCcCCCCC-CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE
Q 016047           18 DEPARSYQ-SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV   60 (396)
Q Consensus        18 ~~~~~~~~-~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l   60 (396)
                      +.+-.+|+ .+|.|.||||++|..|++.|.+.|    ..+|..+
T Consensus        11 ~~~~~~M~~~kVaIvGAtG~vG~ell~lL~~hp----~~el~~l   50 (381)
T 3hsk_A           11 VPRGSHMSVKKAGVLGATGSVGQRFILLLSKHP----EFEIHAL   50 (381)
T ss_dssp             -------CCEEEEEETTTSHHHHHHHHHHTTCS----SEEEEEE
T ss_pred             ccccccCCccEEEEECCCChHHHHHHHHHHcCC----CceEEEe
Confidence            44445554 589999999999999999998842    3467655

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=90.72  E-value=0.19  Score=39.62  Aligned_cols=39  Identities=18%  Similarity=0.110  Sum_probs=30.8

Q ss_pred             CCCCCCEEEEEcCC---ChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           21 ARSYQSVALIVGVT---GIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        21 ~~~~~~~iLVtGat---GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +...+++|.|.|+|   |.+|..+++.|++     .||+|+.++++.
T Consensus        10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~-----~G~~V~~vnp~~   51 (138)
T 1y81_A           10 NSKEFRKIALVGASKNPAKYGNIILKDLLS-----KGFEVLPVNPNY   51 (138)
T ss_dssp             ----CCEEEEETCCSCTTSHHHHHHHHHHH-----TTCEEEEECTTC
T ss_pred             cccCCCeEEEEeecCCCCCHHHHHHHHHHH-----CCCEEEEeCCCC
Confidence            44557899999987   9999999999998     799988877653

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=90.65  E-value=0.15  Score=47.34  Aligned_cols=37  Identities=16%  Similarity=0.163  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +.+++|||+||+|-+|..++..+..     .|.+|+++++++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~-----~Ga~Vi~~~~~~  198 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKK-----AKCHVIGTCSSD  198 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence            3457999999999999999998887     788999999874

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=90.64  E-value=0.39  Score=42.73  Aligned_cols=54  Identities=19%  Similarity=0.116  Sum_probs=43.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ..+++++|.|++|.+|+.++..|+.     .|..|+.+.|+.                    .++.+.++.+|.|+...
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~-----~gAtVtv~h~~t--------------------~~L~~~~~~ADIVI~Av  211 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLN-----AGATVSVCHIKT--------------------KDLSLYTRQADLIIVAA  211 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTTC--------------------SCHHHHHTTCSEEEECS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHHhhcCCEEEECC
Confidence            3568999999999999999999998     788999887642                    12567788888766653

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=90.64  E-value=0.18  Score=46.20  Aligned_cols=38  Identities=21%  Similarity=0.204  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ...+++|||+||+|-+|...+..+..     .|.+|+++++++
T Consensus       146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~  183 (334)
T 3qwb_A          146 VKKGDYVLLFAAAGGVGLILNQLLKM-----KGAHTIAVASTD  183 (334)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCH
Confidence            34568999999999999999998887     789999999865

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=90.61  E-value=0.12  Score=46.99  Aligned_cols=64  Identities=16%  Similarity=0.109  Sum_probs=44.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ...+++|.|.| .|.||+.+++.|..     .|++|++.+|.+........+++.     .   ++.++++.+|.|+-
T Consensus       139 ~l~g~~vgIiG-~G~IG~~~A~~l~~-----~G~~V~~~d~~~~~~~~~~~g~~~-----~---~l~ell~~aDvV~l  202 (307)
T 1wwk_A          139 ELEGKTIGIIG-FGRIGYQVAKIANA-----LGMNILLYDPYPNEERAKEVNGKF-----V---DLETLLKESDVVTI  202 (307)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCHHHHHHTTCEE-----C---CHHHHHHHCSEEEE
T ss_pred             ccCCceEEEEc-cCHHHHHHHHHHHH-----CCCEEEEECCCCChhhHhhcCccc-----c---CHHHHHhhCCEEEE
Confidence            34568999998 89999999999998     799999999876431000112221     1   24567778886443

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=90.60  E-value=0.19  Score=46.54  Aligned_cols=39  Identities=21%  Similarity=0.141  Sum_probs=33.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .+.+++|||+||+|-+|..++..+..     .|.+|++++|++.
T Consensus       165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~  203 (353)
T 4dup_A          165 LTEGESVLIHGGTSGIGTTAIQLARA-----FGAEVYATAGSTG  203 (353)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHHH-----cCCEEEEEeCCHH
Confidence            34567999999999999999999987     7899999998753

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=90.60  E-value=0.085  Score=47.54  Aligned_cols=35  Identities=23%  Similarity=0.249  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |.++|+|.| +|-+|+.++..|.+     .|++|++++|++
T Consensus         1 M~mkI~iiG-aGa~G~~~a~~L~~-----~g~~V~~~~r~~   35 (294)
T 3g17_A            1 MSLSVAIIG-PGAVGTTIAYELQQ-----SLPHTTLIGRHA   35 (294)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHH-----HCTTCEEEESSC
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEEecc
Confidence            557899998 79999999999998     788999999975

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=90.47  E-value=0.18  Score=46.25  Aligned_cols=37  Identities=24%  Similarity=0.271  Sum_probs=31.6

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +-|+++|.|.| +|.+|+.++..|.+     .|++|++.+|++
T Consensus        11 ~~~~~kI~iIG-~G~mG~ala~~L~~-----~G~~V~~~~r~~   47 (335)
T 1z82_A           11 HHMEMRFFVLG-AGSWGTVFAQMLHE-----NGEEVILWARRK   47 (335)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred             cccCCcEEEEC-cCHHHHHHHHHHHh-----CCCeEEEEeCCH
Confidence            45788999999 89999999999998     799999999974

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=90.47  E-value=0.19  Score=45.42  Aligned_cols=36  Identities=22%  Similarity=0.220  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      +.++|.|.| .|.+|..++..|.+     .||+|++.+|++.
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~-----~G~~V~~~dr~~~   41 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLR-----AGLSTWGADLNPQ   41 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEECCHH
Confidence            447899998 89999999999998     8999999999753

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=90.44  E-value=0.44  Score=44.41  Aligned_cols=35  Identities=20%  Similarity=0.134  Sum_probs=25.6

Q ss_pred             CEEEEEcCCChhHHHHHH-HcCCCCCCCCCcEEEEEeC
Q 016047           26 SVALIVGVTGIVGNSLAE-ILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~-~L~~~~~~~~g~~V~~l~R   62 (396)
                      ++|.|.||||++|..|++ .|.+.+.+  ..++..++-
T Consensus         5 ~~VaIvGATG~vG~ellr~lL~~hp~~--~~~l~~~ss   40 (377)
T 3uw3_A            5 MNVGLVGWRGMVGSVLMQRMQEEGDFD--LIEPVFFST   40 (377)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGG--GSEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCC--ceEEEEEec
Confidence            689999999999999999 66663211  136666653

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=90.35  E-value=0.2  Score=46.45  Aligned_cols=34  Identities=26%  Similarity=0.219  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .++|.|.| +|.+|+.++..|.+     .|++|++.+|++
T Consensus        29 ~mkI~VIG-aG~mG~alA~~La~-----~G~~V~l~~r~~   62 (356)
T 3k96_A           29 KHPIAILG-AGSWGTALALVLAR-----KGQKVRLWSYES   62 (356)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHT-----TTCCEEEECSCH
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHH-----CCCeEEEEeCCH
Confidence            46899999 69999999999998     799999999974

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=90.29  E-value=0.39  Score=46.23  Aligned_cols=71  Identities=21%  Similarity=0.168  Sum_probs=51.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHH-HHhcCCCe
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQA-KLSQLTDV   97 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~-~~~~~~~V   97 (396)
                      ....++|+|.| .|.+|.+|++.|.+      +++|.++.++....   ....++..++.||-+|++-+.+ -+..+|.+
T Consensus       232 ~~~~~~v~I~G-gG~ig~~lA~~L~~------~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~  304 (461)
T 4g65_A          232 EKPYRRIMIVG-GGNIGASLAKRLEQ------TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVF  304 (461)
T ss_dssp             GSCCCEEEEEC-CSHHHHHHHHHHTT------TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEE
T ss_pred             cccccEEEEEc-chHHHHHHHHHhhh------cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEE
Confidence            33457899999 89999999999864      58999998875421   0011567899999999997765 35556644


Q ss_pred             eE
Q 016047           98 TH   99 (396)
Q Consensus        98 ~h   99 (396)
                      +.
T Consensus       305 ia  306 (461)
T 4g65_A          305 IA  306 (461)
T ss_dssp             EE
T ss_pred             EE
Confidence            33

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=90.28  E-value=0.17  Score=45.28  Aligned_cols=62  Identities=18%  Similarity=0.079  Sum_probs=42.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ++|.|.| +|.+|..++..|.+     .||+|++.+|++.... ....++..       ..++.+++.++|.|+-+
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~-----~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~~aDvvi~~   64 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVK-----AGCSVTIWNRSPEKAEELAALGAER-------AATPCEVVESCPVTFAM   64 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHH-----CCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEE
Confidence            5899999 79999999999998     7999999999865320 00012211       12345667778865544

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=90.21  E-value=0.25  Score=45.85  Aligned_cols=35  Identities=23%  Similarity=0.227  Sum_probs=31.0

Q ss_pred             CCC-EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQS-VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~-~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |.+ +|.|.| +|.+|..++..|.+     .||+|++++|++
T Consensus        13 m~M~kI~iIG-~G~mG~~la~~L~~-----~G~~V~~~~r~~   48 (366)
T 1evy_A           13 LYLNKAVVFG-SGAFGTALAMVLSK-----KCREVCVWHMNE   48 (366)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHTT-----TEEEEEEECSCH
T ss_pred             hccCeEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEECCH
Confidence            444 899999 69999999999998     799999999874

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=90.17  E-value=0.33  Score=42.95  Aligned_cols=54  Identities=15%  Similarity=0.119  Sum_probs=43.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ..+++++|.|+++.+|+.++..|++     .|..|+.+.++.                    .++.+.++.+|.|+...
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~-----~gAtVtv~~~~t--------------------~~L~~~~~~ADIVI~Av  201 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLN-----RNYTVSVCHSKT--------------------KDIGSMTRSSKIVVVAV  201 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTTC--------------------SCHHHHHHHSSEEEECS
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHH-----CCCeEEEEeCCc--------------------ccHHHhhccCCEEEECC
Confidence            4568999999999999999999998     788999887642                    23567788888766653

>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*

Probab=90.15  E-value=0.4  Score=46.72  Aligned_cols=40  Identities=23%  Similarity=0.321  Sum_probs=33.3

Q ss_pred             CcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           19 EPARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        19 ~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +|.+..+++|+|.| +||-|..++++|.+     .+++|+++++++
T Consensus        36 ~p~~~~KprVVIIG-gG~AGl~~A~~L~~-----~~~~VtLId~~~   75 (502)
T 4g6h_A           36 DPQHSDKPNVLILG-SGWGAISFLKHIDT-----KKYNVSIISPRS   75 (502)
T ss_dssp             CCCSCSSCEEEEEC-SSHHHHHHHHHSCT-----TTCEEEEEESSS
T ss_pred             CCCCCCCCCEEEEC-CcHHHHHHHHHhhh-----CCCcEEEECCCC
Confidence            34444456999999 79999999999987     789999999864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=90.09  E-value=0.18  Score=46.10  Aligned_cols=39  Identities=18%  Similarity=0.152  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .+.+++|||+||+|-+|...+..+..     .|.+|+++++++.
T Consensus       138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~  176 (325)
T 3jyn_A          138 VKPGEIILFHAAAGGVGSLACQWAKA-----LGAKLIGTVSSPE  176 (325)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHH-----HTCEEEEEESSHH
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHH-----CCCEEEEEeCCHH
Confidence            34568999999999999999988887     7889999998653

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=90.08  E-value=0.23  Score=46.05  Aligned_cols=33  Identities=30%  Similarity=0.267  Sum_probs=26.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   61 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~   61 (396)
                      +.+|.|.||||++|..|++.|.+.|    ..++..+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP----~~el~~l~   39 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHP----YIKPAYLA   39 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCS----SEEEEEEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCC----CceEEEEE
Confidence            4689999999999999999888742    34666665

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=90.08  E-value=0.23  Score=46.05  Aligned_cols=33  Identities=30%  Similarity=0.267  Sum_probs=26.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   61 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~   61 (396)
                      +.+|.|.||||++|..|++.|.+.|    ..++..+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP----~~el~~l~   39 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHP----YIKPAYLA   39 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCS----SEEEEEEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCC----CceEEEEE
Confidence            4689999999999999999888742    34666665

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=90.00  E-value=0.16  Score=46.20  Aligned_cols=32  Identities=13%  Similarity=0.021  Sum_probs=29.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARR   63 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~   63 (396)
                      ++|.|.| +|.+|..++..|.+     .|+ +|++.+|+
T Consensus        25 ~~I~iIG-~G~mG~~~A~~L~~-----~G~~~V~~~dr~   57 (312)
T 3qsg_A           25 MKLGFIG-FGEAASAIASGLRQ-----AGAIDMAAYDAA   57 (312)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----HSCCEEEEECSS
T ss_pred             CEEEEEC-ccHHHHHHHHHHHH-----CCCCeEEEEcCC
Confidence            6899999 79999999999998     799 99999996

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=89.88  E-value=0.21  Score=45.92  Aligned_cols=40  Identities=18%  Similarity=0.289  Sum_probs=33.8

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      .+.+++|||+||+|-+|...+..+..     .|.+|+++++++..
T Consensus       142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~-----~Ga~Vi~~~~~~~~  181 (340)
T 3gms_A          142 LQRNDVLLVNACGSAIGHLFAQLSQI-----LNFRLIAVTRNNKH  181 (340)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHH-----HTCEEEEEESSSTT
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHH-----cCCEEEEEeCCHHH
Confidence            34567999999999999999988877     78899999987643

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=89.82  E-value=0.19  Score=46.21  Aligned_cols=35  Identities=26%  Similarity=0.320  Sum_probs=27.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      ++|.|.||||++|+.+++.|.+.+.  ..++|+++..
T Consensus         4 ~kV~I~GAtG~iG~~llr~L~~~~~--p~~elv~i~s   38 (336)
T 2r00_A            4 FNVAIFGATGAVGETMLEVLQEREF--PVDELFLLAS   38 (336)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTC--CEEEEEEEEC
T ss_pred             cEEEEECCCCHHHHHHHHHHhcCCC--CCEEEEEEEC
Confidence            6899999999999999999987311  1357777763

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=89.79  E-value=0.2  Score=44.55  Aligned_cols=35  Identities=17%  Similarity=0.064  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+++|+|+|+ |-+|+.++..|.+     .|++|++++|+.
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~-----~G~~v~v~~R~~  152 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQ-----AQQNIVLANRTF  152 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHH-----TTCEEEEEESSH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHH-----CCCEEEEEECCH
Confidence            4579999997 7899999999998     788999999975

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=89.66  E-value=0.88  Score=39.60  Aligned_cols=33  Identities=18%  Similarity=0.403  Sum_probs=26.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEE-EeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~   64 (396)
                      +||.|+|+ |.+|+.+++.+.+     .++++.+ ++|.+
T Consensus         4 mkI~ViGa-GrMG~~i~~~l~~-----~~~eLva~~d~~~   37 (243)
T 3qy9_A            4 MKILLIGY-GAMNQRVARLAEE-----KGHEIVGVIENTP   37 (243)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEECSSC
T ss_pred             eEEEEECc-CHHHHHHHHHHHh-----CCCEEEEEEecCc
Confidence            69999999 9999999999987     3337665 55554

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=89.66  E-value=0.41  Score=42.52  Aligned_cols=55  Identities=15%  Similarity=0.189  Sum_probs=43.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ..+++++|.|++|.+|+.++..|+.     .|..|+.+.|+.                    .++.+.++.+|.|+...+
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~-----~gAtVtv~hs~t--------------------~~L~~~~~~ADIVI~Avg  213 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLN-----AKATVTTCHRFT--------------------TDLKSHTTKADILIVAVG  213 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTTC--------------------SSHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHhcccCCEEEECCC
Confidence            3568999999999999999999998     788998886542                    135677888887666543

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=89.63  E-value=0.38  Score=43.05  Aligned_cols=34  Identities=15%  Similarity=0.041  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+++++||||+ -+|+.++..|.+     .| +|++++|+.
T Consensus       127 ~~k~vlV~GaG-giG~aia~~L~~-----~G-~V~v~~r~~  160 (287)
T 1nvt_A          127 KDKNIVIYGAG-GAARAVAFELAK-----DN-NIIIANRTV  160 (287)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHTS-----SS-EEEEECSSH
T ss_pred             CCCEEEEECch-HHHHHHHHHHHH-----CC-CEEEEECCH
Confidence            35799999975 999999999999     78 999998864

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=89.38  E-value=0.089  Score=45.22  Aligned_cols=34  Identities=26%  Similarity=0.403  Sum_probs=30.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEE-EeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYG-VARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~-l~R~~~   65 (396)
                      ++|.|.| +|.+|..++..|.+     .|++|++ .+|++.
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~-----~g~~V~~v~~r~~~   58 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTA-----AQIPAIIANSRGPA   58 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHH-----TTCCEEEECTTCGG
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEECCCHH
Confidence            6899999 99999999999998     7899998 777654

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=89.37  E-value=0.56  Score=41.68  Aligned_cols=54  Identities=28%  Similarity=0.284  Sum_probs=43.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      ..+++++|.|++|.+|+.++..|+.     .|..|+.+.++..                    ++.+.++.+|.|+...
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~-----~gAtVtv~hs~T~--------------------~L~~~~~~ADIVI~Av  212 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLL-----GGCTVTVTHRFTR--------------------DLADHVSRADLVVVAA  212 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHH-----TTCEEEEECTTCS--------------------CHHHHHHTCSEEEECC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHH-----CCCeEEEEeCCCc--------------------CHHHHhccCCEEEECC
Confidence            3568999999999999999999998     7889998866421                    2567788888766654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=89.37  E-value=0.19  Score=47.23  Aligned_cols=72  Identities=13%  Similarity=0.118  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEec----------------CCC----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCD----------------VSD----   83 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~D----------------l~d----   83 (396)
                      +.+|+|+|+ |-+|...++.|..     .|.+|+++++++... ....-+.+++..+                +++    
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~-----lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~  263 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARR-----LGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQV  263 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHH-----CCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhh
Confidence            579999995 9999999999998     799999999986531 0000122332222                222    


Q ss_pred             --hHHHHHHHhcCCCeeEEEE
Q 016047           84 --PEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        84 --~~~~~~~~~~~~~V~h~a~  102 (396)
                        .+.+.++++++|.|+.++.
T Consensus       264 ~~~~~l~e~l~~aDVVI~tvl  284 (405)
T 4dio_A          264 KQAALVAEHIAKQDIVITTAL  284 (405)
T ss_dssp             HHHHHHHHHHHTCSEEEECCC
T ss_pred             hhHhHHHHHhcCCCEEEECCc
Confidence              2478889999998887754

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=89.28  E-value=0.1  Score=46.90  Aligned_cols=33  Identities=18%  Similarity=0.149  Sum_probs=28.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ++|.|.| +|.+|+.++..|.+     .|++|++.+ ++.
T Consensus         4 m~i~iiG-~G~~G~~~a~~l~~-----~g~~V~~~~-~~~   36 (295)
T 1yb4_A            4 MKLGFIG-LGIMGSPMAINLAR-----AGHQLHVTT-IGP   36 (295)
T ss_dssp             CEEEECC-CSTTHHHHHHHHHH-----TTCEEEECC-SSC
T ss_pred             CEEEEEc-cCHHHHHHHHHHHh-----CCCEEEEEc-CHH
Confidence            5899999 89999999999998     789998887 543

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=89.26  E-value=0.16  Score=47.27  Aligned_cols=62  Identities=19%  Similarity=0.095  Sum_probs=43.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ..+++|.|.| .|.||+.+++.|..     .|++|++.+|..........++.        ..+++++++.+|.|+
T Consensus       174 l~gktvGIIG-lG~IG~~vA~~l~~-----fG~~V~~~d~~~~~~~~~~~g~~--------~~~l~ell~~aDvV~  235 (365)
T 4hy3_A          174 IAGSEIGIVG-FGDLGKALRRVLSG-----FRARIRVFDPWLPRSMLEENGVE--------PASLEDVLTKSDFIF  235 (365)
T ss_dssp             SSSSEEEEEC-CSHHHHHHHHHHTT-----SCCEEEEECSSSCHHHHHHTTCE--------ECCHHHHHHSCSEEE
T ss_pred             cCCCEEEEec-CCcccHHHHHhhhh-----CCCEEEEECCCCCHHHHhhcCee--------eCCHHHHHhcCCEEE
Confidence            3468999999 99999999999988     79999999987432100011222        123567788888644

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=89.22  E-value=0.27  Score=44.81  Aligned_cols=63  Identities=19%  Similarity=0.126  Sum_probs=43.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .++|.|.| .|.+|..++..|.+     .|++|++.+|++.... ....++..       ..++.++++++|.|+-+
T Consensus        31 ~~~I~iIG-~G~mG~~~a~~l~~-----~G~~V~~~dr~~~~~~~l~~~g~~~-------~~~~~e~~~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLG-TGSMGLPMARRLCE-----AGYALQVWNRTPARAASLAALGATI-------HEQARAAARDADIVVSM   94 (320)
T ss_dssp             CSEEEEEC-CTTTHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHTTTCEE-------ESSHHHHHTTCSEEEEC
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHh-----CCCeEEEEcCCHHHHHHHHHCCCEe-------eCCHHHHHhcCCEEEEE
Confidence            46999998 79999999999998     7999999999764210 00112221       12345667788865544

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=89.02  E-value=0.33  Score=43.78  Aligned_cols=33  Identities=18%  Similarity=0.331  Sum_probs=30.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ++|.|.| .|.+|+.++..|.+     .|++|++++|++
T Consensus        16 ~~I~VIG-~G~mG~~iA~~la~-----~G~~V~~~d~~~   48 (302)
T 1f0y_A           16 KHVTVIG-GGLMGAGIAQVAAA-----TGHTVVLVDQTE   48 (302)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHh-----CCCeEEEEECCH
Confidence            6899999 59999999999998     799999999875

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=88.96  E-value=0.22  Score=43.53  Aligned_cols=36  Identities=8%  Similarity=0.037  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc----EEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW----KVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~----~V~~l~R~~~   65 (396)
                      |.++|.|.| +|.+|..++..|.+     .|+    +|++.+|++.
T Consensus         1 M~~~i~iIG-~G~mG~~~a~~l~~-----~g~~~~~~V~~~~r~~~   40 (247)
T 3gt0_A            1 MDKQIGFIG-CGNMGMAMIGGMIN-----KNIVSSNQIICSDLNTA   40 (247)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHH-----TTSSCGGGEEEECSCHH
T ss_pred             CCCeEEEEC-ccHHHHHHHHHHHh-----CCCCCCCeEEEEeCCHH
Confidence            457899999 99999999999998     787    8999999754

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=88.93  E-value=0.29  Score=45.07  Aligned_cols=37  Identities=24%  Similarity=0.267  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCC-CcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGG-PWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~-g~~V~~l~R~~   64 (396)
                      ..+++|||+||+|-+|..++..+..     . |.+|+++++++
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~-----~~Ga~Vi~~~~~~  206 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKA-----VSGATIIGVDVRE  206 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHH-----HTCCEEEEEESSH
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHH-----cCCCeEEEEcCCH
Confidence            3467999999999999999998887     7 89999999865

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=88.87  E-value=0.26  Score=47.75  Aligned_cols=36  Identities=22%  Similarity=0.228  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~   64 (396)
                      .|.++|.|.| +|++|..++..|.+     .  |++|++++|++
T Consensus         7 ~~~mkI~VIG-~G~vG~~~A~~La~-----~g~g~~V~~~D~~~   44 (481)
T 2o3j_A            7 GKVSKVVCVG-AGYVGGPTCAMIAH-----KCPHITVTVVDMNT   44 (481)
T ss_dssp             CCCCEEEEEC-CSTTHHHHHHHHHH-----HCTTSEEEEECSCH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHh-----cCCCCEEEEEECCH
Confidence            3446999999 89999999999997     5  79999999875

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=88.76  E-value=0.09  Score=49.01  Aligned_cols=72  Identities=15%  Similarity=0.165  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecC------------------CCh
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDV------------------SDP   84 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl------------------~d~   84 (396)
                      .+.+|+|+|+ |-+|...++.|..     .|.+|++++|++.... ...-+.+++..|+                  .+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~-----lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~  256 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKR-----LGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQ  256 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHH-----HTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhH
Confidence            3579999995 9999999999988     7899999999864310 0001233332221                  123


Q ss_pred             HHHHHHHhcCCCeeEEE
Q 016047           85 EETQAKLSQLTDVTHIF  101 (396)
Q Consensus        85 ~~~~~~~~~~~~V~h~a  101 (396)
                      +.+.++++++|.|+.++
T Consensus       257 ~~l~e~l~~aDIVI~tv  273 (381)
T 3p2y_A          257 QALEDAITKFDIVITTA  273 (381)
T ss_dssp             HHHHHHHTTCSEEEECC
T ss_pred             HHHHHHHhcCCEEEECC
Confidence            56788899999877664

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=88.75  E-value=0.36  Score=43.86  Aligned_cols=36  Identities=36%  Similarity=0.600  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~   65 (396)
                      |.++|.|.| .|.+|..++..|.+     .|+  +|++.+|++.
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~-----~G~~~~V~~~dr~~~   69 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRR-----SGFKGKIYGYDINPE   69 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHH-----TTCCSEEEEECSCHH
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHh-----CCCCCEEEEEECCHH
Confidence            347999999 89999999999998     788  9999999753

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=88.72  E-value=0.3  Score=45.06  Aligned_cols=33  Identities=21%  Similarity=0.220  Sum_probs=30.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ++|+|.| +|.+|+.++..|.+     .|++|++++|++
T Consensus         5 mki~iiG-~G~~G~~~a~~L~~-----~g~~V~~~~r~~   37 (359)
T 1bg6_A            5 KTYAVLG-LGNGGHAFAAYLAL-----KGQSVLAWDIDA   37 (359)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHh-----CCCEEEEEeCCH
Confidence            6899999 59999999999998     789999999875

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=88.63  E-value=0.48  Score=42.14  Aligned_cols=55  Identities=15%  Similarity=0.169  Sum_probs=43.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ..+++++|.|+++.+|+.++..|+.     .|..|+.+.+++                    .++.+.++.+|.|+...+
T Consensus       157 l~gk~vvVIG~s~iVG~p~A~lL~~-----~gAtVtv~hs~t--------------------~~L~~~~~~ADIVI~Avg  211 (288)
T 1b0a_A          157 TFGLNAVVIGASNIVGRPMSMELLL-----AGCTTTVTHRFT--------------------KNLRHHVENADLLIVAVG  211 (288)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHT-----TTCEEEEECSSC--------------------SCHHHHHHHCSEEEECSC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHH-----CCCeEEEEeCCc--------------------hhHHHHhccCCEEEECCC
Confidence            4568999999999999999999998     788999886543                    235677888887666533

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=88.54  E-value=0.18  Score=44.36  Aligned_cols=65  Identities=12%  Similarity=0.110  Sum_probs=44.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .+ +|+|.|+ |-.|+.++..|.+     .|. +|++++|.+.+.......+...  +   .+++.+.+.++|.|+++
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~-----~G~~~I~v~nR~~~ka~~la~~~~~~--~---~~~~~~~~~~aDiVIna  173 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQ-----MGVKDIWVVNRTIERAKALDFPVKIF--S---LDQLDEVVKKAKSLFNT  173 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHH-----TTCCCEEEEESCHHHHHTCCSSCEEE--E---GGGHHHHHHTCSEEEEC
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHH-----cCCCEEEEEeCCHHHHHHHHHHcccC--C---HHHHHhhhcCCCEEEEC
Confidence            34 8999995 8999999999998     687 7999999864321111222221  2   23456678888877775

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=88.52  E-value=0.24  Score=46.47  Aligned_cols=37  Identities=16%  Similarity=0.106  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      .+++|+|+| +|-+|...++.|..     .|.+|++++|++..
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~-----~Ga~V~~~d~~~~~  207 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKR-----LGAVVMATDVRAAT  207 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCSTT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEeCCHHH
Confidence            468999999 59999999999987     78899999987643

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=88.49  E-value=0.21  Score=45.19  Aligned_cols=33  Identities=27%  Similarity=0.290  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC-----C-cEEEEEeC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG-----P-WKVYGVAR   62 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~-----g-~~V~~l~R   62 (396)
                      ++++|.|.| .|.+|+.++..|.+     .     | ++|++++|
T Consensus         7 ~~m~I~iiG-~G~mG~~~a~~L~~-----~~~~~~g~~~V~~~~r   45 (317)
T 2qyt_A            7 QPIKIAVFG-LGGVGGYYGAMLAL-----RAAATDGLLEVSWIAR   45 (317)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHH-----HHHHTTSSEEEEEECC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHh-----CccccCCCCCEEEEEc
Confidence            446899999 89999999999998     7     8 99999998

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=88.46  E-value=0.67  Score=41.08  Aligned_cols=55  Identities=16%  Similarity=0.031  Sum_probs=43.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ..+++++|.|++..+|..++..|+.     .  |..|+.+.|+.                    .++.+.++.+|.|+..
T Consensus       156 l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~~atVtv~h~~t--------------------~~L~~~~~~ADIVI~A  210 (281)
T 2c2x_A          156 IAGAHVVVIGRGVTVGRPLGLLLTR-----RSENATVTLCHTGT--------------------RDLPALTRQADIVVAA  210 (281)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHTS-----TTTCCEEEEECTTC--------------------SCHHHHHTTCSEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHhc-----CCCCCEEEEEECch--------------------hHHHHHHhhCCEEEEC
Confidence            4568999999999999999999998     6  77899886543                    2367778888876665


Q ss_pred             EE
Q 016047          101 FY  102 (396)
Q Consensus       101 a~  102 (396)
                      .+
T Consensus       211 vg  212 (281)
T 2c2x_A          211 VG  212 (281)
T ss_dssp             SC
T ss_pred             CC
Confidence            44

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	396
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	8e-07
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.002

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 48.3 bits (114), Expect = 8e-07
 Identities = 51/294 (17%), Positives = 88/294 (29%), Gaps = 43/294 (14%)

Query: 27  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP--KPNWNADHL----------V 74
           VALI GVTG  G+ LAE L         ++V+G+ RR         DH+           
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKG-----YEVHGIKRRASSFNTERVDHIYQDPHTCNPKF 57

Query: 75  EYVQCDVSDPE--ETQAKLSQLTDVTHIFYVTWTNRSTE--AENCKINGSMFRNVLRAVI 130
                D+SD        +  Q  +V ++  ++    S E       ++      +L A+ 
Sbjct: 58  HLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIR 117

Query: 131 PNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY----YTLEDILF 186
                 +    Q  T       E +G     + P  E  P     + Y         I  
Sbjct: 118 FLGLEKKTRFYQASTS------ELYG--LVQEIPQKETTP-FYPRSPYAVAKLYAYWIT- 167

Query: 187 EEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIP-LRFPGTKAAWEC 245
               +   +              P      V      A     +G+    + G   +   
Sbjct: 168 VNYRESYGMYACNGILFNHES--PRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRD 225

Query: 246 YSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY 299
           +  A D       ++   +    + E F    G  +  +   ++ A Q GI+  
Sbjct: 226 WGHAKDY-----VKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLR 274

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 50/305 (16%), Positives = 89/305 (29%), Gaps = 44/305 (14%)

Query: 27  VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP-------------KPNWNADHL 73
           VALI G+TG  G+ LAE L         ++V+G+ RR               P  + +  
Sbjct: 3   VALITGITGQDGSYLAEFLLEKG-----YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 57

Query: 74  VEYVQCDVSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENC----KINGSMFRNVLRAV 129
           ++    D++D       ++++           ++     +       ++G     +L AV
Sbjct: 58  MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 117

Query: 130 IPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY----YTLEDIL 185
                       Q  T       E +GK++  + P  E  P     + Y         I+
Sbjct: 118 KTCGLINSVKFYQASTS------ELYGKVQ--EIPQKETTP-FYPRSPYGAAKLYAYWIV 168

Query: 186 FEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEG-IPLRFPGTKAAWE 244
                +   L              P    N V      +    + G +     G   A  
Sbjct: 169 -VNFREAYNLFAVNGILFNHES--PRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR 225

Query: 245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEE 304
            +  A D        +        + E F    G+V   +   +      G       + 
Sbjct: 226 DWGHAKDYVEAMWLMLQ-----NDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKN 280

Query: 305 EEEGG 309
           E E G
Sbjct: 281 ENEVG 285

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	396
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.97
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.97
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.96
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.95
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.94
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.9
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.9
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.89
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.88
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.87
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.8
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.8
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.45
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.33
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.31
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.3
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.27
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.27
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.26
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.26
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.25
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.25
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.24
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.24
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.22
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.22
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.22
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.18
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.18
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.17
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.17
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.16
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.16
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.16
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.15
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.15
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.14
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.14
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.14
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.13
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.12
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.11
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.1
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.1
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.08
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.08
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.07
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.07
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.07
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.07
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.05
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.05
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.03
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.02
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.99
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.97
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.97
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.93
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	98.9
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.9
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.89
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.85
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.82
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.82
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.8
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.79
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.75
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.74
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.73
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	98.66
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.64
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	98.52
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.32
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.32
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	98.27
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.05
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	97.98
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.79
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.77
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.72
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.71
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.61
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.59
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	97.59
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.54
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.53
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.53
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.5
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.45
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.32
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.29
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.24
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.23
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.19
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.11
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.1
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.93
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.84
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.77
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.75
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.68
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.4
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.34
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.28
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.27
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.22
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	95.82
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.82
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	95.82
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.49
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.28
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.24
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.23
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.03
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	94.97
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.96
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	94.81
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	94.81
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.59
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.43
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.31
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.28
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.24
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.21
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.21
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.18
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.13
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	94.05
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.03
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.99
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.92
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.83
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.73
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.64
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.49
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.48
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.38
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	93.37
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.31
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	93.23
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.06
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	92.98
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	92.97
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	92.97
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.96
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.94
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	92.88
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.81
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.8
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	92.79
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.65
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	92.58
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	92.4
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	92.37
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.35
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.34
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.15
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.14
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.11
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	91.9
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	91.77
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.68
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.52
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.38
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.18
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	91.07
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	90.5
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	90.43
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	90.39
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	90.35
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	90.29
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	90.12
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	89.9
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.88
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	89.79
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	89.77
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	89.76
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.6
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	89.56
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.28
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.16
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	89.1
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	88.8
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	88.66
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	88.53
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	88.21
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	88.14
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	87.25
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	87.23
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	87.1
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	86.84
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	86.56
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.48
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.26
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	85.87
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.81
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	85.32
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	84.59
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	84.42
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	84.14
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	84.12
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	84.11
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	83.82
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	83.59
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	83.41
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	83.26
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	83.04
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	82.94
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	82.65
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	82.33
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	82.24
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	81.93
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	81.8
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	81.33
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	80.89
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	80.87
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	80.74
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	80.68
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	80.65
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	80.54
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	80.43
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	80.39

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.4e-40  Score=309.31  Aligned_cols=321  Identities=16%  Similarity=0.099  Sum_probs=213.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .|.|||||||||||++|+++|++     .||+|++++|.+...            ....++++++++|++|.+++.+++.
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLE-----KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILR   75 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHH-----CcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHh
Confidence            37899999999999999999999     899999999964310            1123588999999999999999999


Q ss_pred             cC--CCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           93 QL--TDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        93 ~~--~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                      ++  |.|+|+|+.+....  .++...+++|+.||.|||++|++.+ .+..+|+++||..       +||.  +...|++|
T Consensus        76 ~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~-------vYG~--~~~~~~~E  146 (357)
T d1db3a_          76 EVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE-------LYGL--VQEIPQKE  146 (357)
T ss_dssp             HHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-------GGTT--CCSSSBCT
T ss_pred             ccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchh-------hhCC--CCCCCcCC
Confidence            76  77999998765443  4778889999999999999999874 3466788877644       5553  23568999


Q ss_pred             CCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHH-HhhhcCCCceecCCcc
Q 016047          168 DMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAA-VCKHEGIPLRFPGTKA  241 (396)
Q Consensus       168 ~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~g~~~  241 (396)
                      ++|..|...  |+.     |+++..+. +..+++++++||++|||+..+.... ...+...+. +.. .+......|++.
T Consensus       147 ~~~~~P~~~--Y~~sK~~~E~~~~~~~-~~~~l~~~ilR~~~vyGp~~~~~~~-~~~i~~~~~~~~~-~~~~~~~~g~~~  221 (357)
T d1db3a_         147 TTPFYPRSP--YAVAKLYAYWITVNYR-ESYGMYACNGILFNHESPRRGETFV-TRKITRAIANIAQ-GLESCLYLGNMD  221 (357)
T ss_dssp             TSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTSCTTSH-HHHHHHHHHHHHT-TSCCCEEESCTT
T ss_pred             CCCCCCCCh--HHHHHHHHHHHHHHHH-HHhCCCEEEEEeccccCCCCCcCCC-chHHHHHHHHHHh-CCCceEEECCCC
Confidence            998877544  664     66666655 5668999999999999953222111 112212221 222 223345568888


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHh
Q 016047          242 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  321 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (396)
                      +.++++|+.|+   |.+++.++..  ..+++||++++..+|++|+++.+.+.+|........         ...... ..
T Consensus       222 ~~r~~~~v~D~---~~a~~~~~~~--~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~---------~~~~~~-~~  286 (357)
T d1db3a_         222 SLRDWGHAKDY---VKMQWMMLQQ--EQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGT---------GVEEKG-IV  286 (357)
T ss_dssp             CEECCEEHHHH---HHHHHHTTSS--SSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESC---------GGGCEE-EE
T ss_pred             eeecceeechH---HHHHHHHHhC--CCCCeEEECCCCceehHHHHHHHHHHhCCccccccc---------cccccc-hh
Confidence            77788877776   7777766643  356889999999999999999999999865321100         000000 00


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccceeehhhhc----CcccccchhhHhh-cCCCccccCHHHHHHHHHHH
Q 016047          322 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLT----GEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKV  389 (396)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~  389 (396)
                      ....  +..   .....+...     ..+.+....    .....+|++|+++ |||+|+++++|+|+++|+++
T Consensus       287 ~~~~--~~~---~~~~~~~~~-----~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~  349 (357)
T d1db3a_         287 VSVT--GHD---APGVKPGDV-----IIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAND  349 (357)
T ss_dssp             EEEC--SSS---CTTCCTTCE-----EEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             hhhh--ccc---ccccccCce-----eEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            0000  000   000000000     001111111    1145679999987 69999999999999998653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.7e-37  Score=289.86  Aligned_cols=303  Identities=16%  Similarity=0.124  Sum_probs=218.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ++|+|||||||||||++|+++|++     .||+|++++|.....            .....+++++.+|+.|...+....
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~   89 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLK-----LDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC   89 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc
Confidence            457999999999999999999999     899999999854321            001246889999999999998888


Q ss_pred             hcCCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           92 SQLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                      ...+.|+|+++.+....  .++...+++|+.|+.+|+++|++.+  +++++++||..+|       |..  ...|.+|++
T Consensus        90 ~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~--~~~~i~~SS~~vy-------g~~--~~~~~~E~~  158 (341)
T d1sb8a_          90 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK--VQSFTYAASSSTY-------GDH--PGLPKVEDT  158 (341)
T ss_dssp             TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGG-------TTC--CCSSBCTTC
T ss_pred             ccccccccccccccccccccCccchhheeehhHHHHHHHHHhcC--CceEEEcccceee-------CCC--CCCCccCCC
Confidence            88888999876544322  2667789999999999999999874  6788888766555       432  356889999


Q ss_pred             CCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047          170 PRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWE  244 (396)
Q Consensus       170 p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  244 (396)
                      |..|.+.  |+.     |+++..+. +..+++++++||++|||+..........-+..+.. ....+.++.+.|++.+.+
T Consensus       159 ~~~p~~~--Y~~sK~~~E~~~~~~~-~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~-~~~~g~~i~~~g~g~~~r  234 (341)
T d1sb8a_         159 IGKPLSP--YAVTKYVNELYADVFS-RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTS-SMIQGDDVYINGDGETSR  234 (341)
T ss_dssp             CCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHH-HHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCc--chHHHHHHHHHHHHHH-HHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHH-HHHcCCceEEcCCCCEEE
Confidence            8877554  664     66665554 66789999999999999643322111111111111 112367778888888888


Q ss_pred             eeeecccHHHHHHHHHHHhcC-CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhcc
Q 016047          245 CYSIASDADLIAEHQIWAAVD-PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKG  323 (396)
Q Consensus       245 ~~~~~~da~~la~~~i~~~~~-~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (396)
                      +++|+.|+   +.++..+... ....+++||++++...|+.|+++.+.+.++.+......           ...      
T Consensus       235 ~~i~v~D~---~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~-----------~~~------  294 (341)
T d1sb8a_         235 DFCYIENT---VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHR-----------EPV------  294 (341)
T ss_dssp             CCEEHHHH---HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCC-----------CCE------
T ss_pred             EEEEEecc---chhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccc-----------ccc------
Confidence            88887776   6666555543 34568899999999999999999999999865432210           000      


Q ss_pred             chHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          324 KEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       324 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                                .....+..               ....+.|++|+++ |||+|+++++++|+++++||+.
T Consensus       295 ----------~~~~~~~~---------------~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~  338 (341)
T d1sb8a_         295 ----------YRDFREGD---------------VRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM  338 (341)
T ss_dssp             ----------EECCCTTC---------------CSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             ----------ccCCCCCC---------------cCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence                      00000000               0134579999997 6999999999999999999985

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.4e-37  Score=290.24  Aligned_cols=304  Identities=12%  Similarity=0.030  Sum_probs=213.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHhcCCCeeEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHIF  101 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a  101 (396)
                      .++|||||||||||||++|+++|++     +||+|++++|....... .....++..+|+.+.+.+.++++++|.|+|+|
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a   87 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKH-----EGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA   87 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecc
Confidence            3568999999999999999999999     89999999986544321 22456889999999999999999999999998


Q ss_pred             EeccCC---CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcc
Q 016047          102 YVTWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  178 (396)
Q Consensus       102 ~~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~  178 (396)
                      +.....   ...+......|+.+|.+++++|++.+  +++++++||..+|+....  .+.........|..|..|...  
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~--vk~~i~~SS~~~~~~~~~--~~~~~~~~~~~e~~~~~p~~~--  161 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING--IKRFFYASSACIYPEFKQ--LETTNVSLKESDAWPAEPQDA--  161 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEEEGGGSCGGGS--SSSSSCEECGGGGSSBCCSSH--
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhC--cccccccccccccccccc--ccccccccccccCCcCCCCCH--
Confidence            654332   23567788999999999999999875  789998887776654311  110001122334455555433  


Q ss_pred             hhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHH
Q 016047          179 YTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDAD  253 (396)
Q Consensus       179 y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~  253 (396)
                      |+.     |+++..+. +..|++++++||+++||+........................+....|++.+.+.++++.|+ 
T Consensus       162 Yg~sK~~~E~~~~~~~-~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~-  239 (363)
T d2c5aa1         162 FGLEKLATEELCKHYN-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDEC-  239 (363)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHH-
T ss_pred             HHHHHHHHHHHHHHHH-HHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHH-
Confidence            664     55555554 56789999999999999532211110000111111112234455667888888888887776 


Q ss_pred             HHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHH
Q 016047          254 LIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVR  333 (396)
Q Consensus       254 ~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (396)
                        +.+++.++..  ..+++||++++..+|+.|+++++.+.+|.+.....            .+                 
T Consensus       240 --~~~~~~~~~~--~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~------------~~-----------------  286 (363)
T d2c5aa1         240 --VEGVLRLTKS--DFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHH------------IP-----------------  286 (363)
T ss_dssp             --HHHHHHHHHS--SCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEE------------EC-----------------
T ss_pred             --HHHHHHHHhC--CCCCeEEEecCCcccHHHHHHHHHHHhCCCCceEe------------CC-----------------
Confidence              6666666543  35788999999999999999999999887643210            00                 


Q ss_pred             HhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          334 ENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       334 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                          .+...               ....+|++|+++ |||+|+++++|+|+++++||++
T Consensus       287 ----~~~~~---------------~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~  326 (363)
T d2c5aa1         287 ----GPEGV---------------RGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKE  326 (363)
T ss_dssp             ----CCCCC---------------SBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHH
T ss_pred             ----CCCCc---------------cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence                00000               134479999987 6999999999999999999965

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=9.5e-37  Score=283.87  Aligned_cols=292  Identities=15%  Similarity=0.163  Sum_probs=215.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcE------EEEEeCCCCC-------CCCCCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK------VYGVARRPKP-------NWNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~------V~~l~R~~~~-------~~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      |||||||||||||++|+++|++     +||+      |+++++....       ......+++++.+|+.+.........
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~-----~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   75 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLA-----GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR   75 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc
Confidence            5899999999999999999998     5654      5556543211       11234688999999999999988889


Q ss_pred             cCCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           93 QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      ..|.|+|+|+.+....  .++.+.+++|+.|+.+++++|++.+  +++++++||..+|       |..  ...+++|++|
T Consensus        76 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~--~~~~I~~Ss~~~y-------g~~--~~~~~~E~~~  144 (322)
T d1r6da_          76 GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVY-------GSI--DSGSWTESSP  144 (322)
T ss_dssp             TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGG-------CCC--SSSCBCTTSC
T ss_pred             ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC--CceEEEeecceee-------cCC--CCCCCCCCCC
Confidence            9999999976543322  2567778999999999999999875  6788888765544       432  2567899998


Q ss_pred             CCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcch-hHHHHHHHHHHhhhcCCCceecCCccccc
Q 016047          171 RLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN-LVGALCVYAAVCKHEGIPLRFPGTKAAWE  244 (396)
Q Consensus       171 ~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~g~~~~~~  244 (396)
                      ..|...  |+.     |+++..+. ++++++++++||++|||  |+...+ +...+   +. ....+.++.+.|++.+.+
T Consensus       145 ~~p~~~--Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyG--p~~~~~~~i~~~---i~-~~~~~~~i~v~~~g~~~r  215 (322)
T d1r6da_         145 LEPNSP--YAASKAGSDLVARAYH-RTYGLDVRITRCCNNYG--PYQHPEKLIPLF---VT-NLLDGGTLPLYGDGANVR  215 (322)
T ss_dssp             CCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEEC--TTCCTTSHHHHH---HH-HHHTTCCEEEETTSCCEE
T ss_pred             CCCCCH--HHHHHHHHHHHHHHHH-HHhCCCEEEEEeeeEEC--cCCCcCcHHHHH---HH-HHHcCCCcEEecCCCeEE
Confidence            877554  664     66666665 66789999999999999  543222 22222   11 112366777888999888


Q ss_pred             eeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccc
Q 016047          245 CYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGK  324 (396)
Q Consensus       245 ~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (396)
                      +++|+.|+   |++++.++.+ ...+++||++++..+|+.|+++.+.+.+|.+......                     
T Consensus       216 ~~i~v~D~---a~ai~~~~~~-~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~---------------------  270 (322)
T d1r6da_         216 EWVHTDDH---CRGIALVLAG-GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRK---------------------  270 (322)
T ss_dssp             EEEEHHHH---HHHHHHHHHH-CCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEE---------------------
T ss_pred             ccEEHHHH---HHHHHHHHhC-CCCCCeeEEeecccchhHHHHHHHHHHhCCCccceee---------------------
Confidence            89988887   7777776655 3457899999999999999999999999976432110                     


Q ss_pred             hHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          325 EGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       325 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                .  ...+..             ...+.+|++|+++ |||+|+++++|+|+++++||++.
T Consensus       271 ----------~--~~~~~~-------------~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n  314 (322)
T d1r6da_         271 ----------V--ADRKGH-------------DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN  314 (322)
T ss_dssp             ----------E--CCCTTC-------------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             ----------c--CCCCCC-------------CceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence                      0  000000             0034579999986 69999999999999999999874

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=6.1e-37  Score=289.53  Aligned_cols=310  Identities=14%  Similarity=0.100  Sum_probs=213.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcE-EEEEeCCCCC-------CCCCCCCeeEEEecCCChHHHHHHHhc--CC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWK-VYGVARRPKP-------NWNADHLVEYVQCDVSDPEETQAKLSQ--LT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-V~~l~R~~~~-------~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~   95 (396)
                      |||||||||||||++|+++|++     .||+ |+++++.+..       .....++++++++|++|++.+..++.+  +|
T Consensus         1 MkILItG~tGfIGs~l~~~L~~-----~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   75 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIK-----NTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPD   75 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHH-----HCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHH-----CCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCC
Confidence            5899999999999999999998     7887 5666654321       123446899999999999999988876  67


Q ss_pred             CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCC-------CcceEEEeccceeecccccccccCCCCCCC-c
Q 016047           96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAP-------NLRHVCLQTGTKHYLGPFEAFGKIKPYDPP-F  165 (396)
Q Consensus        96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~-------~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p-~  165 (396)
                      .|+|||+.+....  .++...+++|+.||.+++++|++.+.       ++++|+++||..+|+......-.......| .
T Consensus        76 ~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~  155 (361)
T d1kewa_          76 AVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLF  155 (361)
T ss_dssp             EEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCB
T ss_pred             EEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCc
Confidence            7999987644322  25677899999999999999987531       356889888777665431111000001122 2


Q ss_pred             cCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcch-hHHHHHHHHHHhhhcCCCceecCC
Q 016047          166 TEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN-LVGALCVYAAVCKHEGIPLRFPGT  239 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~g~  239 (396)
                      .|+++..|...  |+.     |+++..+. +.++++++++||++|||  |+...+ +...+...  +  ..+.++.+.|+
T Consensus       156 ~e~~~~~p~s~--Yg~sK~~~E~~~~~~~-~~~~i~~~~lR~~~vyG--p~~~~~~~i~~~i~~--~--~~g~~~~v~g~  226 (361)
T d1kewa_         156 TETTAYAPSSP--YSASKASSDHLVRAWR-RTYGLPTIVTNCSNNYG--PYHFPEKLIPLVILN--A--LEGKPLPIYGK  226 (361)
T ss_dssp             CTTSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECEEES--TTCCTTSHHHHHHHH--H--HHTCCEEEETT
T ss_pred             ccCCCCCCCCH--HHHHHHHHHHHHHHHH-HHhCCCEEEEecCceEC--cCCCcCcHHHHHHHH--H--HcCCCcEEeCC
Confidence            34444444433  664     66666655 56789999999999999  543322 22222111  1  13667777899


Q ss_pred             ccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHH
Q 016047          240 KAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  319 (396)
Q Consensus       240 ~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  319 (396)
                      +.+.++++|+.|+   |++++.++.. ...+++|||+++...|+.|+++.+.+.++........             .. 
T Consensus       227 g~~~r~~i~v~D~---a~ai~~~~~~-~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~-------------~~-  288 (361)
T d1kewa_         227 GDQIRDWLYVEDH---ARALHMVVTE-GKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATS-------------YR-  288 (361)
T ss_dssp             SCCEEEEEEHHHH---HHHHHHHHHH-CCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSC-------------GG-
T ss_pred             CCeEEeCEEHHHH---HHHHHHHHhc-CCCCCeEEECCCCCcchHHHHhHhhhhcccccccccC-------------cc-
Confidence            9998888888887   7777776655 3457899999999999999999999988755432110             00 


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          320 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       320 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                          ..+......     ......+.+|++||++ |||+|+++++|+|+++++||++.
T Consensus       289 --------------------~~~~~~~~~-----~~~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n  337 (361)
T d1kewa_         289 --------------------EQITYVADR-----PGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             --------------------GGEEEECCC-----TTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             --------------------cceeecCCC-----CCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence                                000000000     0011145679999986 69999999999999999999775

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-36  Score=283.14  Aligned_cols=298  Identities=14%  Similarity=0.070  Sum_probs=204.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh--cCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS--QLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~--~~~   95 (396)
                      |||||||||||||++|+++|++     +||+|++++|.....        .....+++++++|++|.+.+.++++  ++|
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   75 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQ-----NGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAID   75 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCC
Confidence            5799999999999999999999     899999998743221        0123579999999999999999998  678


Q ss_pred             CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      .|+|+|+......  .++.+.+++|+.||.|+|++|++.+  +++++++||..+|..       .  ...+..|+.+.. 
T Consensus        76 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~--v~~~i~~Ss~~vy~~-------~--~~~~~~e~~~~~-  143 (338)
T d1udca_          76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVYGD-------Q--PKIPYVESFPTG-  143 (338)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCS-------C--CSSSBCTTSCCC-
T ss_pred             EEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC--CCEEEecCcceEEcc-------c--cccccccccccC-
Confidence            8999987543222  2567889999999999999999875  788888876655532       2  133344544332 


Q ss_pred             CCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc--------chhHHHHHHHHHHhhhcCCCceecCC-
Q 016047          174 APNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--------MNLVGALCVYAAVCKHEGIPLRFPGT-  239 (396)
Q Consensus       174 ~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~g~-  239 (396)
                      .+...|+.     |+++.++..+..+++++++||++|||+.+...        .+...+..  .........++.+.|+ 
T Consensus       144 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~i~i~g~~  221 (338)
T d1udca_         144 TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI--AQVAVGRRDSLAIFGND  221 (338)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHH--HHHHTTSSSCEEEECSC
T ss_pred             CCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHH--HHHHhcCCCCEEEeCCC
Confidence            12333553     66666555456789999999999999644311        11111111  1112222345444443 


Q ss_pred             -----ccccceeeecccHHHHHHHHHHHh--cCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCc
Q 016047          240 -----KAAWECYSIASDADLIAEHQIWAA--VDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGT  312 (396)
Q Consensus       240 -----~~~~~~~~~~~da~~la~~~i~~~--~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~  312 (396)
                           +.+.++++++.|+   +.+...+.  ......+++||++++..+|+.|+++.+.+.+|.+.....          
T Consensus       222 ~~~~~g~~~rd~i~v~D~---~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~----------  288 (338)
T d1udca_         222 YPTEDGTGVRDYIHVMDL---ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHF----------  288 (338)
T ss_dssp             SSSTTSSCEECEEEHHHH---HHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEE----------
T ss_pred             cccCCCCceeeEEEEeeh---hhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEE----------
Confidence                 4555667776665   43333322  233455789999999999999999999999996643210          


Q ss_pred             ccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          313 QRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                        .                    ...+..               .....+|++|+++ |||+|+++++|+|+++++|+++
T Consensus       289 --~--------------------~~~~~~---------------~~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~  331 (338)
T d1udca_         289 --A--------------------PRREGD---------------LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSR  331 (338)
T ss_dssp             --E--------------------CCCTTC---------------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             --C--------------------CCCCCC---------------CCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHh
Confidence              0                    000110               0134579999997 6999999999999999999987


Q ss_pred             C
Q 016047          392 F  392 (396)
Q Consensus       392 ~  392 (396)
                      .
T Consensus       332 ~  332 (338)
T d1udca_         332 H  332 (338)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-37  Score=288.51  Aligned_cols=292  Identities=15%  Similarity=0.123  Sum_probs=200.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      +|||||||||||||++|+++|++     +||+|++++|.....      ......+++...|+.+     .++.++|.|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~~~~d~Vi   70 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMM-----DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-----PLYIEVDQIY   70 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS-----CCCCCCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHH-----HHHcCCCEEE
Confidence            47999999999999999999999     899999999743221      1122345555555543     4456789999


Q ss_pred             EEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCC
Q 016047           99 HIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPN  176 (396)
Q Consensus        99 h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~  176 (396)
                      |+|+.....  ..++.+.+++|+.|+.||+++|++.+  + +++++||..+|+.+  ..++.  .+....|.+|..|.  
T Consensus        71 hlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~--~-k~I~~SS~~vy~~~--~~~~~--~e~~~~~~~~~~p~--  141 (312)
T d2b69a1          71 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--A-RLLLASTSEVYGDP--EVHPQ--SEDYWGHVNPIGPR--  141 (312)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--C-EEEEEEEGGGGBSC--SSSSB--CTTCCCBCCSSSTT--
T ss_pred             ECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC--C-cEEEEEChheecCC--CCCCC--CccccCCCCCCCCc--
Confidence            998754432  23677889999999999999999874  3 57777766656532  11111  11223333444443  


Q ss_pred             cchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc-hhHHHHHHHHHHhhhcCCCceecCCccccceeeecc
Q 016047          177 FYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM-NLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIAS  250 (396)
Q Consensus       177 ~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~  250 (396)
                      ..|+.     |+++..+. +.++++++++||++|||+...... .+...+..    ....+.++.++|++.+.++++|+.
T Consensus       142 ~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~----~~~~g~~i~i~~~g~~~r~~i~v~  216 (312)
T d2b69a1         142 ACYDEGKRVAETMCYAYM-KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFIL----QALQGEPLTVYGSGSQTRAFQYVS  216 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECTTCCTTCCCHHHHHHH----HHHHTCCEEEESSSCCEEECEEHH
T ss_pred             cHHHHHHHHHHHHHHHHH-HHhCCcEEEEEeeeEECCCCCCCCccHHHHHHH----HHHcCCCeEEeCCCCeeEccEEHH
Confidence            34664     66666655 667999999999999995433222 22222211    112367778889888888888887


Q ss_pred             cHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHH
Q 016047          251 DADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEE  330 (396)
Q Consensus       251 da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (396)
                      |+   +++++.++..  ..++.||++++..+++.++++.+++.+|.+.....          .                 
T Consensus       217 D~---~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------~-----------------  264 (312)
T d2b69a1         217 DL---VNGLVALMNS--NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQF----------L-----------------  264 (312)
T ss_dssp             HH---HHHHHHHHTS--SCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEE----------E-----------------
T ss_pred             HH---HHHHHHHHhh--ccCCceEecCCcccchhhHHHHHHHHhCCCCceEE----------C-----------------
Confidence            76   7777666543  35678999999999999999999999987643200          0                 


Q ss_pred             HHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          331 IVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       331 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                           ...+.   .            .....+|++|+++ +||+|.++++++|+++++||++.
T Consensus       265 -----~~~~~---~------------~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~  307 (312)
T d2b69a1         265 -----SEAQD---D------------PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE  307 (312)
T ss_dssp             -----CCCTT---C------------CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             -----CCCCC---C------------CCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence                 00000   0            0134579999986 59999999999999999999753

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.2e-36  Score=283.22  Aligned_cols=304  Identities=14%  Similarity=0.093  Sum_probs=209.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC--------CCCCCeeEEEecCCChHHHHHHHh--cCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW--------NADHLVEYVQCDVSDPEETQAKLS--QLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~--~~~   95 (396)
                      |.|||||||||||++|+++|++     +||+|++++|......        ....+++++++|+.|.+.+..++.  ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~-----~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIE-----NGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHH-----CcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCC
Confidence            6799999999999999999999     8999999987543210        123578999999999999998887  578


Q ss_pred             CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      .|+|+|+......  .++.....+|+.||.+++++|++.+  +++++++||..+|+....     .+...+++|+.+..|
T Consensus        77 ~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~--i~~~i~~SS~~vyg~~~~-----~~~~~~~~e~~~~~p  149 (347)
T d1z45a2          77 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN--VSKFVFSSSATVYGDATR-----FPNMIPIPEECPLGP  149 (347)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCCGGG-----STTCCSBCTTSCCCC
T ss_pred             EEEEccccccccccccCcccccccchhhhHHHHHHHHhcc--cceEEeecceeeecCccc-----CCCCCccccccCCCC
Confidence            8999988643322  2567788999999999999999864  788998887776654311     123567888888776


Q ss_pred             CCCcchhH-----HHHHHHHhh-cCCCeeEEEEcCCceeecCCCCcc--------hhHHHHHHHHHHhhhcCCCceecCC
Q 016047          174 APNFYYTL-----EDILFEEVE-KKEELSWSVHRPDTIFGFSPYSLM--------NLVGALCVYAAVCKHEGIPLRFPGT  239 (396)
Q Consensus       174 ~~~~~y~~-----e~~l~~~~~-~~~~~~~~ilRp~~v~G~~~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~g~  239 (396)
                      ...  |+.     |+++.++.. ...+++++++||+++||+.+....        +....+.  .....+.+.++.+.|+
T Consensus       150 ~~~--Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~i~i~g~  225 (347)
T d1z45a2         150 TNP--YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYM--AQVAVGRREKLYIFGD  225 (347)
T ss_dssp             CSH--HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH--HHHHTTSSSCCCCC--
T ss_pred             CCh--hHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHH--HHHHhcCCCCeEEeCC
Confidence            544  665     555555432 356799999999999996543211        1111111  1112223455556666


Q ss_pred             ccccc---eeeecccHHHHHHHHHHHhc------CCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCC
Q 016047          240 KAAWE---CYSIASDADLIAEHQIWAAV------DPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGG  310 (396)
Q Consensus       240 ~~~~~---~~~~~~da~~la~~~i~~~~------~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~  310 (396)
                      +.+.+   +..|+.++.+.+.+++.++.      .....+++||++++..+|+.|+++.+.+.+|.+......       
T Consensus       226 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~-------  298 (347)
T d1z45a2         226 DYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVT-------  298 (347)
T ss_dssp             ----CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC----------
T ss_pred             CccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeC-------
Confidence            65443   34455555555555555432      223457899999999999999999999999977543100       


Q ss_pred             CcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHH
Q 016047          311 GTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKV  389 (396)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~  389 (396)
                           +                .    .+...               .+..+|++|+++ |||+|.++++|+|+++++|+
T Consensus       299 -----~----------------~----~~~~~---------------~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~  338 (347)
T d1z45a2         299 -----G----------------R----RAGDV---------------LNLTAKPDRAKRELKWQTELQVEDSCKDLWKWT  338 (347)
T ss_dssp             -------------------------------C---------------CCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHH
T ss_pred             -----C----------------C----CCCCC---------------CEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHH
Confidence                 0                0    00000               034579999987 79999999999999999999


Q ss_pred             hhC
Q 016047          390 KGF  392 (396)
Q Consensus       390 ~~~  392 (396)
                      ++.
T Consensus       339 ~~n  341 (347)
T d1z45a2         339 TEN  341 (347)
T ss_dssp             HHC
T ss_pred             HhC
Confidence            976

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.8e-36  Score=282.62  Aligned_cols=300  Identities=12%  Similarity=0.068  Sum_probs=207.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC--CCC------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP--KPN------WNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~--~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      || |+|||||||||||++|+++|++     .||+|.++.++.  ...      .....+++++.+|+.|.+.+..++..+
T Consensus         1 ~~-mkILVTGgtGfIGs~lv~~L~~-----~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~   74 (346)
T d1oc2a_           1 QF-KNIIVTGGAGFIGSNFVHYVYN-----NHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKA   74 (346)
T ss_dssp             CC-SEEEEETTTSHHHHHHHHHHHH-----HCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTC
T ss_pred             Cc-CEEEEeCCCcHHHHHHHHHHHH-----CCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhh
Confidence            35 7999999999999999999998     787755554432  111      112358999999999999999999999


Q ss_pred             CCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccC-----CCCCCCccC
Q 016047           95 TDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI-----KPYDPPFTE  167 (396)
Q Consensus        95 ~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~-----~~~~~p~~E  167 (396)
                      +.|+|+|+.+....  .++.+.+++|+.|+.|++++|++.+.   ++++.||..+|++.  .+...     .......+|
T Consensus        75 ~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~---k~i~~ss~~vyg~~--~~~~~~~~~~~~~~~~~~e  149 (346)
T d1oc2a_          75 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI---RFHHVSTDEVYGDL--PLREDLPGHGEGPGEKFTA  149 (346)
T ss_dssp             SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC---EEEEEEEGGGGCCB--CCGGGSTTTTCSTTSSBCT
T ss_pred             hhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc---cccccccceEeccc--CccccccccccCccccccc
Confidence            99999977543322  25678889999999999999998753   44555555555431  11100     011234556


Q ss_pred             CCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcch-hHHHHHHHHHHhhhcCCCceecCCcc
Q 016047          168 DMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN-LVGALCVYAAVCKHEGIPLRFPGTKA  241 (396)
Q Consensus       168 ~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~g~~~  241 (396)
                      +++..|.+.  |+.     |+++..+. +..+++++++||++|||  |+.... ....+   +. ....+.++...|++.
T Consensus       150 ~~~~~p~s~--Y~~sK~~~E~~~~~~~-~~~~i~~~ilR~~~vyG--p~~~~~~~~~~~---i~-~~~~~~~~~i~~~g~  220 (346)
T d1oc2a_         150 ETNYNPSSP--YSSTKAASDLIVKAWV-RSFGVKATISNCSNNYG--PYQHIEKFIPRQ---IT-NILAGIKPKLYGEGK  220 (346)
T ss_dssp             TSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEES--TTCCTTSHHHHH---HH-HHHHTCCCEEETTSC
T ss_pred             CCCCCCCCH--HHHHHHHHHHHHHHHH-HHcCCCEEEEeecceeC--CCCCccchhHHH---HH-HHHcCCceeEeCCCC
Confidence            666555443  664     66666655 66789999999999999  443221 11111   11 112355667788888


Q ss_pred             ccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHh
Q 016047          242 AWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFM  321 (396)
Q Consensus       242 ~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (396)
                      +.+.++++.|+   |.+++.+... ...++.||++++...++.++++.+.+.++.+......           .      
T Consensus       221 ~~r~~i~v~D~---a~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------~------  279 (346)
T d1oc2a_         221 NVRDWIHTNDH---STGVWAILTK-GRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH-----------V------  279 (346)
T ss_dssp             CEEECEEHHHH---HHHHHHHHHH-CCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEE-----------E------
T ss_pred             ccccccchhhH---HHHHHHHHhh-cccCccccccccccccchHHHHHHHHHhCCCCcceEE-----------C------
Confidence            88888888876   6666665544 4557889999999999999999999999875433211           0      


Q ss_pred             ccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccc-cCHHHHHHHHHHHhhC
Q 016047          322 KGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFR-NSKNSFITWIDKVKGF  392 (396)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~~~~~~~~~~~~~~  392 (396)
                                    ...+..               ..++.+|++|+++ |||+|++ +++++|+++++||++.
T Consensus       280 --------------~~~~~~---------------~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n  323 (346)
T d1oc2a_         280 --------------TDRAGH---------------DLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN  323 (346)
T ss_dssp             --------------CCCTTC---------------CCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             --------------CCCCCC---------------CceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence                          000000               0134579999986 6999997 6999999999999864

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.2e-35  Score=274.23  Aligned_cols=297  Identities=15%  Similarity=0.139  Sum_probs=208.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHhcCCC--
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQLTD--   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~--   96 (396)
                      |+|||||||||||++|+++|++     +||+|++++|.....       ....++++++.+|++|.+.+.+.+.....  
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~-----~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLE-----KGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccccccc
Confidence            6899999999999999999999     899999999976432       11235789999999999999888877554  


Q ss_pred             eeEEEEeccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           97 VTHIFYVTWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        97 V~h~a~~~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      ++|+++.....  ..++.+.++.|+.||.++|++|++.+. .+++++.|+..+       ||..  ...+.+|++|..|.
T Consensus        76 ~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~-~~~~i~~Ss~~~-------~~~~--~~~~~~E~~~~~p~  145 (321)
T d1rpna_          76 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEM-------FGLI--QAERQDENTPFYPR  145 (321)
T ss_dssp             EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGG-------GCSC--SSSSBCTTSCCCCC
T ss_pred             cccccccccccccccchHHHHhhhhhchHHHHHHHHHhCC-Ccccccccchhh-------cCcc--cCCCCCCCCCcccc
Confidence            44443322111  225677899999999999999998753 456666665443       3322  24567788887765


Q ss_pred             CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhH-HHHHHHH-HHhhhcCCCceecCCccccceee
Q 016047          175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYA-AVCKHEGIPLRFPGTKAAWECYS  247 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~-~i~~~~~~~~~~~g~~~~~~~~~  247 (396)
                      ..  |+.     |+++..+. +..+++++++||+++||+  ....+.. ..+..++ .+..+ +.+....|++.+.+.++
T Consensus       146 ~~--Y~~sK~~~E~~~~~~~-~~~~~~~~~lr~~~vyGp--~~~~~~~~~~i~~~~~~~~~~-~~~~i~~g~g~~~r~~i  219 (321)
T d1rpna_         146 SP--YGVAKLYGHWITVNYR-ESFGLHASSGILFNHESP--LRGIEFVTRKVTDAVARIKLG-KQQELRLGNVDAKRDWG  219 (321)
T ss_dssp             SH--HHHHHHHHHHHHHHHH-HHHCCCEEEEEECCEECT--TSCTTSHHHHHHHHHHHHHTT-SCSCEEESCTTCEEECE
T ss_pred             Ch--hHHHHHHHHHHHHHHH-hhcCCcEEEEEEecccCC--CccccccHHHHHHHHHHHHhC-CCCcEEECCCCeEEccE
Confidence            44  664     66666665 567899999999999994  3222221 1121111 12221 33445578888888888


Q ss_pred             ecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHH
Q 016047          248 IASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGV  327 (396)
Q Consensus       248 ~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (396)
                      |+.|+   |++++.++.++  .++.||++++...|+.++++.+.+.+|........           ++.          
T Consensus       220 ~v~D~---~~~~~~~~~~~--~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~-----------~~~----------  273 (321)
T d1rpna_         220 FAGDY---VEAMWLMLQQD--KADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLK-----------IDP----------  273 (321)
T ss_dssp             EHHHH---HHHHHHHHHSS--SCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEE-----------ECG----------
T ss_pred             EeHHH---HHHHHHHHhcC--CcCCceecccccceehhhhHHHHHHhCCCccceee-----------cCC----------
Confidence            88776   77877777654  35679999999999999999999999876432110           100          


Q ss_pred             HHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          328 WEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       328 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                             ...++..               ...+..|++|+++ |||+|+++++|+|+++++|+.+
T Consensus       274 -------~~~rp~~---------------~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~  316 (321)
T d1rpna_         274 -------AFFRPAE---------------VDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR  316 (321)
T ss_dssp             -------GGCCSSC---------------CCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             -------CCCCCCc---------------cCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence                   0001111               0134579999997 5999999999999999999653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-35  Score=277.03  Aligned_cols=300  Identities=13%  Similarity=0.079  Sum_probs=203.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------------CCCCCCeeEEEecCCChHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------------WNADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------------~~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      |.|||||||||||||++|+++|++     +||+|++++|.....              .....+++++++|++|.+.+.+
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~-----~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~   75 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLE-----AGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQR   75 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHH-----TTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHH-----CcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccc
Confidence            789999999999999999999999     899999998632211              0123578999999999999999


Q ss_pred             HHhcCCC--eeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           90 KLSQLTD--VTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        90 ~~~~~~~--V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      ++.+.+.  |+|+|+......  .++.+.+++|+.||.+++++|++.+  ++++++.||..+|       |...  ....
T Consensus        76 ~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~--v~~~i~~ss~~~~-------~~~~--~~~~  144 (346)
T d1ek6a_          76 LFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVY-------GNPQ--YLPL  144 (346)
T ss_dssp             HHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGG-------CSCS--SSSB
T ss_pred             cccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC--cccccccccceee-------eccc--cccc
Confidence            8988775  788877543322  2567889999999999999999875  7788877755444       4321  1111


Q ss_pred             cCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc--------chhHHHHHHHHHHhhhcCC
Q 016047          166 TEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL--------MNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~i~~~~~~  232 (396)
                      .++.+ ...+...|+.     |+.+.+++.+..+++.+++||+.+||+.....        .+......  .....+.+.
T Consensus       145 ~~~~~-~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  221 (346)
T d1ek6a_         145 DEAHP-TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYV--SQVAIGRRE  221 (346)
T ss_dssp             CTTSC-CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH--HHHHHTSSS
T ss_pred             ccccc-ccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHH--HHHHHcCCC
Confidence            11111 1222233653     66666665456789999999999999643211        11111111  111222233


Q ss_pred             Cceec------CCccccceeeecccHHHHHHHHHHHh--cCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCch
Q 016047          233 PLRFP------GTKAAWECYSIASDADLIAEHQIWAA--VDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEE  304 (396)
Q Consensus       233 ~~~~~------g~~~~~~~~~~~~da~~la~~~i~~~--~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~  304 (396)
                      ++.+.      +++.+.++++|+.|+   |.++..+.  ......+++|||+++..+|+.|+++.+.+.+|.+.+...  
T Consensus       222 ~i~i~g~~~~~~~g~~~Rdfi~v~D~---a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~--  296 (346)
T d1ek6a_         222 ALNVFGNDYDTEDGTGVRDYIHVVDL---AKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV--  296 (346)
T ss_dssp             CEEEECSCSSSSSSSCEECEEEHHHH---HHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEE--
T ss_pred             cEEEcCCcccCCCCCeeEeEEEEEec---cchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEE--
Confidence            43332      234455677777766   55544442  233456789999999999999999999999997643210  


Q ss_pred             hhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHH
Q 016047          305 EEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFI  383 (396)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~  383 (396)
                                .                    ..++...               .....|++|+++ |||+|+++++|+|+
T Consensus       297 ----------~--------------------~~~~~e~---------------~~~~~d~~k~~~~lgw~p~~slee~I~  331 (346)
T d1ek6a_         297 ----------V--------------------ARREGDV---------------AACYANPSLAQEELGWTAALGLDRMCE  331 (346)
T ss_dssp             ----------E--------------------CCCTTCC---------------SEECBCCHHHHHTTCCCCCCCHHHHHH
T ss_pred             ----------C--------------------CCCCCCC---------------CEeeECHHHHHHHHCCCcCCCHHHHHH
Confidence                      0                    0011110               134579999997 69999999999999


Q ss_pred             HHHHHHhhC
Q 016047          384 TWIDKVKGF  392 (396)
Q Consensus       384 ~~~~~~~~~  392 (396)
                      ++++|+++.
T Consensus       332 ~~i~w~~~n  340 (346)
T d1ek6a_         332 DLWRWQKQN  340 (346)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999875

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.4e-35  Score=276.58  Aligned_cols=314  Identities=16%  Similarity=0.171  Sum_probs=205.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCC--CCCCCCCeeEEEecCCChHHHH-HHHhcCCCeeEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKP--NWNADHLVEYVQCDVSDPEETQ-AKLSQLTDVTHIF  101 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~d~~~~~-~~~~~~~~V~h~a  101 (396)
                      |||||||||||||++|+++|++     +| ++|+++++....  .....++++++++|+++.+++. .+++++|.|+|+|
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~-----~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a   75 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLR-----EDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHH-----STTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CEEEEECCCcHHHHHHHHHHHH-----CCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccc
Confidence            4899999999999999999998     66 589999986532  2234578999999998876554 4778899999998


Q ss_pred             EeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCC-----CCC
Q 016047          102 YVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPR-----LDA  174 (396)
Q Consensus       102 ~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~-----~~~  174 (396)
                      +.+....  .++...+.+|+.||.+++++|.+.+  .+. ++.||..+|+...         .....|..+.     ...
T Consensus        76 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~~~-~~~ss~~~~~~~~---------~~~~~~~~~~~~~~~~~~  143 (342)
T d2blla1          76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRI-IFPSTSEVYGMCS---------DKYFDEDHSNLIVGPVNK  143 (342)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEE-EEECCGGGGBTCC---------CSSBCTTTCCCBCCCTTC
T ss_pred             ccccccccccCCcccccccccccccccccccccc--ccc-ccccccccccccc---------ccccccccccccccccCC
Confidence            8644322  2556788999999999999999875  333 4456555554321         1222222211     112


Q ss_pred             CCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc----hhHHHHHHHHHHhhhcCCCceecCCccccce
Q 016047          175 PNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM----NLVGALCVYAAVCKHEGIPLRFPGTKAAWEC  245 (396)
Q Consensus       175 ~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~  245 (396)
                      +...|+.     |+++..+. +..+++++++||+.+||+......    .....+..+.. ....+.++.++|++.+.++
T Consensus       144 p~~~Y~~sK~~~E~~~~~~~-~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~g~~~r~  221 (342)
T d2blla1         144 PRWIYSVSKQLLDRVIWAYG-EKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL-NLVEGSPIKLIDGGKQKRC  221 (342)
T ss_dssp             GGGHHHHHHHHHHHHHHHHH-HHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHH-HHHHTCCEEEGGGSCCEEE
T ss_pred             Ccchhhhcccchhhhhhhhh-cccCceeEEeeccccccccccccccccccccccchHHHH-HHHhCCCccccCCCCeeee
Confidence            2344765     55555554 566899999999999996433211    11111111111 1123678888999998888


Q ss_pred             eeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC-eeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhc
Q 016047          246 YSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD-VFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMK  322 (396)
Q Consensus       246 ~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~-~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (396)
                      ++|+.|+   |++++.++.++  ...+++||+++++ .+|+.|+++.+.+.+|........         .+..... ..
T Consensus       222 ~i~v~D~---~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~---------~~~~~~~-~~  288 (342)
T d2blla1         222 FTDIRDG---IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHF---------PPFAGFR-VV  288 (342)
T ss_dssp             CEEHHHH---HHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGS---------CCCCCEE-EC
T ss_pred             ecccccc---cceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCcccccc---------Ccccccc-ee
Confidence            8888887   77777776553  4568999998765 589999999999999866432110         0000000 00


Q ss_pred             cchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhhCC
Q 016047          323 GKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGFK  393 (396)
Q Consensus       323 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~~  393 (396)
                      ..       ....+....           +.    ....+|++|+++ |||+|+++++|+|+++++||++..
T Consensus       289 ~~-------~~~~~~~~~-----------~~----~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~  338 (342)
T d2blla1         289 ES-------SSYYGKGYQ-----------DV----EHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (342)
T ss_dssp             ------------------------------C----CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             cc-------ccccccccc-----------cc----cccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCc
Confidence            00       000000000           00    134579999997 699999999999999999997653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-34  Score=272.72  Aligned_cols=310  Identities=15%  Similarity=0.070  Sum_probs=208.4

Q ss_pred             CEE-EEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           26 SVA-LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        26 ~~i-LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ||| ||||||||||++|+++|++     +||+|++++|.+...             .....+++++.+|++|++.+..++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~-----~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   75 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLE-----KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKII   75 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHH-----CcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHH
Confidence            578 9999999999999999999     899999999975321             011247889999999999999998


Q ss_pred             hcCCC--eeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccC-CCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           92 SQLTD--VTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA-PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        92 ~~~~~--V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      .+.+.  |+|+++.+....  .++...+++|+.||.+++++|++++ .+.++++++||..       +||..  ...|++
T Consensus        76 ~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~-------vyg~~--~~~~~~  146 (347)
T d1t2aa_          76 NEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE-------LYGKV--QEIPQK  146 (347)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-------GTCSC--SSSSBC
T ss_pred             hhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh-------eecCC--CCCCCC
Confidence            87664  666655332221  2556678999999999999999874 3456788777544       55542  367899


Q ss_pred             CCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhH-HHHHHHHHHhhhcCCCceecCCc
Q 016047          167 EDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAAVCKHEGIPLRFPGTK  240 (396)
Q Consensus       167 E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~g~~  240 (396)
                      |++|..|...  |+.     |+++..+. +..+++++++||++|||  |+...... ..+...+........++...|++
T Consensus       147 E~~~~~P~~~--Yg~sK~~aE~~~~~~~-~~~~~~~~ilr~~~vyG--p~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g  221 (347)
T d1t2aa_         147 ETTPFYPRSP--YGAAKLYAYWIVVNFR-EAYNLFAVNGILFNHES--PRRGANFVTRKISRSVAKIYLGQLECFSLGNL  221 (347)
T ss_dssp             TTSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEEC--TTSCTTSHHHHHHHHHHHHHHTSCSCEEESCT
T ss_pred             CCCCCCCCCH--HHHHHHHHHHHHHHHH-HHhCCCEEEEEecceeC--CCCCCCccccccceeeehhhcCCcceeecCCC
Confidence            9998877544  664     66666654 56789999999999999  43222221 11111111111124456677888


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHH
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEF  320 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  320 (396)
                      .+.++++|+.|+   +.+++.++.+..  .+.|+++.....++++....+...++........            .. ..
T Consensus       222 ~~~r~~i~v~D~---~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~  283 (347)
T d1t2aa_         222 DAKRDWGHAKDY---VEAMWLMLQNDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGK------------NE-NE  283 (347)
T ss_dssp             TCEECCEEHHHH---HHHHHHHHHSSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESC------------GG-GC
T ss_pred             cceeeeeEecHH---HHHHHHHhhcCC--Cccceeccccccccchhhhhhhhhhcceeeeccc------------ch-hh
Confidence            888888887776   777777766532  3569999999999999999999999876432110            00 00


Q ss_pred             hccchHHHHHHHHHhCCCcccccccccceeehhhhc----CcccccchhhHhh-cCCCccccCHHHHHHHHHHH
Q 016047          321 MKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLT----GEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKV  389 (396)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~  389 (396)
                      +..           .. .....     ....+....    ...+.+|++|||+ |||+|+++++|+|+++|++.
T Consensus       284 ~~~-----------~~-~~~~~-----~~~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~  340 (347)
T d1t2aa_         284 VGR-----------CK-ETGKV-----HVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHAD  340 (347)
T ss_dssp             EEE-----------ET-TTCCE-----EEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             hhh-----------hh-hcCCc-----eeeecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            000           00 00000     000011111    1145579999987 69999999999999998653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.5e-34  Score=269.08  Aligned_cols=299  Identities=16%  Similarity=0.107  Sum_probs=204.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      +|++||||||||||++|+++|++     +||+|++++|.++..             ......++++.+|+.+.+.+...+
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~   75 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLG-----KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWI   75 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHH-----CcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHH
Confidence            47999999999999999999999     899999999964310             011245779999999999998887


Q ss_pred             hc--CCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccC---CCcceEEEeccceeecccccccccCCCCCCC
Q 016047           92 SQ--LTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNA---PNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        92 ~~--~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      +.  +|.|+|+|+......  .++......|+.|+.++++++++..   .....+++.|+.       .+++..   ..+
T Consensus        76 ~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~-------~~~~~~---~~~  145 (339)
T d1n7ha_          76 DVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS-------EMFGST---PPP  145 (339)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-------GGGTTS---CSS
T ss_pred             hhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccc-------eecccC---CCC
Confidence            65  578999987533221  2667888999999999999998651   123334433322       234432   566


Q ss_pred             ccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhH-HHHHHHHHHhhhcCCCceecC
Q 016047          165 FTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLV-GALCVYAAVCKHEGIPLRFPG  238 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~g  238 (396)
                      .+|++|..|...  |+.     |+++..+. +.++++++++||++|||+  +....+. ..+............+..+.|
T Consensus       146 ~~E~~~~~p~~~--Y~~sK~~~E~~~~~~~-~~~~~~~~ilR~~~vyGp--~~~~~~~~~~i~~~~~~~~~~~~~~~~~g  220 (339)
T d1n7ha_         146 QSETTPFHPRSP--YAASKCAAHWYTVNYR-EAYGLFACNGILFNHESP--RRGENFVTRKITRALGRIKVGLQTKLFLG  220 (339)
T ss_dssp             BCTTSCCCCCSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECT--TSCTTSHHHHHHHHHHHHHHTSCCCEEES
T ss_pred             CCCCCCCCCcch--hhHHHHHHHHHHHHHH-HHhCCCEEEEEEccccCC--CCCCCCCcchhhHHHHHHhcCCCCeEEeC
Confidence            889998777554  664     66666665 667899999999999994  3222221 112111111111233456678


Q ss_pred             CccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHH
Q 016047          239 TKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLA  318 (396)
Q Consensus       239 ~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  318 (396)
                      ++.+.++++++.|+   |.+++.++.++.  ...+++..+...++.++++.+.+.+|........           +.. 
T Consensus       221 ~~~~~rd~~~v~D~---a~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-----------~~~-  283 (339)
T d1n7ha_         221 NLQASRDWGFAGDY---VEAMWLMLQQEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVE-----------IDQ-  283 (339)
T ss_dssp             CTTCEEECEEHHHH---HHHHHHHHTSSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEE-----------ECG-
T ss_pred             CCCccccceeeehH---HHHHHHHHhcCC--CCccccccccccccchhhhhhhhhhhcccCceee-----------ecc-
Confidence            88888888888776   677776665532  3457777889999999999999999876432110           000 


Q ss_pred             HHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          319 EFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                                      ...++...               .++..|++|+++ |||+|+++++++|+++++|+.+
T Consensus       284 ----------------~~~r~~~~---------------~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~  326 (339)
T d1n7ha_         284 ----------------RYFRPAEV---------------DNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLE  326 (339)
T ss_dssp             ----------------GGSCSSCC---------------CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             ----------------CCCCCCCC---------------CeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence                            00011110               134579999987 6999999999999999999854

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.3e-33  Score=258.03  Aligned_cols=288  Identities=13%  Similarity=0.085  Sum_probs=199.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc--CCCeeEEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ--LTDVTHIFY  102 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~~~V~h~a~  102 (396)
                      +|||||||||||||++|+++|++     +|+.|++++++.             ++|+.+.+.+.+.+++  +|.|+|+|+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~-----~g~~vi~~~~~~-------------~~~~~~~~~~~~~~~~~~~d~v~~~a~   63 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQ-----RGDVELVLRTRD-------------ELNLLDSRAVHDFFASERIDQVYLAAA   63 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTT-----CTTEEEECCCTT-------------TCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHH-----CcCEEEEecCch-------------hccccCHHHHHHHHhhcCCCEEEEcch
Confidence            47999999999999999999999     899988776542             2688999999888766  566888765


Q ss_pred             eccCC---CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC---CC
Q 016047          103 VTWTN---RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA---PN  176 (396)
Q Consensus       103 ~~~~~---~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~---~~  176 (396)
                      .....   ..++.+.+++|+.||.+++++|++++  +++++++||..+|       |..  ...|++|+.+....   +.
T Consensus        64 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--v~~~i~~SS~~vy-------g~~--~~~~~~E~~~~~~~~~~~~  132 (315)
T d1e6ua_          64 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQND--VNKLLFLGSSCIY-------PKL--AKQPMAESELLQGTLEPTN  132 (315)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGS-------CTT--CCSSBCGGGTTSSCCCGGG
T ss_pred             hccccccchhhHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEECCceEc-------CCC--CCCCccCCccccCCCCCCC
Confidence            43211   11456678999999999999999874  7889988765544       432  24567776654322   12


Q ss_pred             cchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCc---chhHHHHHHHHH-HhhhcCCCceecCCccccceee
Q 016047          177 FYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSL---MNLVGALCVYAA-VCKHEGIPLRFPGTKAAWECYS  247 (396)
Q Consensus       177 ~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~-i~~~~~~~~~~~g~~~~~~~~~  247 (396)
                      ..|+.     |+++..+. ++.|++++++||++|||+.....   ......+..... .....+.++...|++.+.+++.
T Consensus       133 ~~Y~~sK~~~E~~~~~~~-~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~  211 (315)
T d1e6ua_         133 EPYAIAKIAGIKLCESYN-RQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL  211 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEE
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEE
Confidence            23664     66666665 66789999999999999543211   111222222111 1222356677788888778888


Q ss_pred             ecccHHHHHHHHHHHhcC--------CCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHH
Q 016047          248 IASDADLIAEHQIWAAVD--------PYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAE  319 (396)
Q Consensus       248 ~~~da~~la~~~i~~~~~--------~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  319 (396)
                      ++.|+   +.++..+...        .......+|++.+...++.++++.+.+.+|.+......                
T Consensus       212 ~v~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~----------------  272 (315)
T d1e6ua_         212 HVDDM---AAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD----------------  272 (315)
T ss_dssp             EHHHH---HHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEE----------------
T ss_pred             Eeehh---HHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEEC----------------
Confidence            77776   5555444422        13345779999999999999999999999876432000                


Q ss_pred             HhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHHHHHhhC
Q 016047          320 FMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       320 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                                      ..++..               ......|++|+|+|||+|+++++|+|+++++||++.
T Consensus       273 ----------------~~~~~~---------------~~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         273 ----------------ASKPDG---------------TPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN  314 (315)
T ss_dssp             ----------------TTSCCC---------------CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             ----------------CCCCCC---------------CceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHHc
Confidence                            000000               003347999999999999999999999999999875

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=2.1e-33  Score=267.36  Aligned_cols=306  Identities=12%  Similarity=0.071  Sum_probs=202.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC------------------------CCCCCCCeeEEEecC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP------------------------NWNADHLVEYVQCDV   81 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~------------------------~~~~~~~v~~~~~Dl   81 (396)
                      |||||||||||||++|+++|+++    .||+|+++++-...                        ....+.++.++.+|+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~----~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di   78 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRD----TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDV   78 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH----CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHh----CCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcc
Confidence            58999999999999999999853    68999999852110                        011234678999999


Q ss_pred             CChHHHHHHHh---cCCCeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccc
Q 016047           82 SDPEETQAKLS---QLTDVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        82 ~d~~~~~~~~~---~~~~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                      +|.+.++++++   ++|.|+|+|+......  ..+...+++|+.+|.+++++|++.+  ++.+++.++...|.+..  ..
T Consensus        79 ~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~--~~~~~~~~s~~~~~~~~--~~  154 (383)
T d1gy8a_          79 RNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK--CDKIIFSSSAAIFGNPT--MG  154 (383)
T ss_dssp             TCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGTBSCC--C-
T ss_pred             cCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC--Ccccccccccccccccc--cc
Confidence            99999988886   4578999877543221  2556778999999999999999875  56666666666665432  11


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc--------hhHHHH-HH
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM--------NLVGAL-CV  222 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--------~~~~~~-~~  222 (396)
                      .......++.|+.+..|...  |+.     |+++.++. +.++++++++||+++||+......        +....+ ..
T Consensus       155 ~~~~~~~~~~e~~~~~p~~~--Y~~sK~~~e~~~~~~~-~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~  231 (383)
T d1gy8a_         155 SVSTNAEPIDINAKKSPESP--YGESKLIAERMIRDCA-EAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGR  231 (383)
T ss_dssp             ----CCCCBCTTSCCBCSSH--HHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHH
T ss_pred             cccccccccccccCCCCCCH--HHhhHhHHHHHHHHHH-HHhCCCEEEEecceeeccCccccccccccccchhHHHHHHH
Confidence            11223456777777666544  664     66666654 567899999999999995432111        111111 11


Q ss_pred             HHHH-----------hhhcCCCceecC------CccccceeeecccHHHHHHHHHHHhcC--------CCCCCceeeecC
Q 016047          223 YAAV-----------CKHEGIPLRFPG------TKAAWECYSIASDADLIAEHQIWAAVD--------PYAKNEAFNCNN  277 (396)
Q Consensus       223 ~~~i-----------~~~~~~~~~~~g------~~~~~~~~~~~~da~~la~~~i~~~~~--------~~~~g~~~ni~~  277 (396)
                      .+..           ....+.++...|      ++.+.++++|+.|+   |++++.+...        ....+++|||++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~---~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s  308 (383)
T d1gy8a_         232 VMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDL---ASAHILALDYVEKLGPNDKSKYFSVFNLGT  308 (383)
T ss_dssp             HHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHH---HHHHHHHHHHHHTCCTTTGGGSEEEEEESC
T ss_pred             HHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHH---HHHHHHHHhhhccccccccccCccEEEeCC
Confidence            1100           000123333333      35666777777776   5555544321        233468999999


Q ss_pred             CCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcC
Q 016047          278 GDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTG  357 (396)
Q Consensus       278 ~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  357 (396)
                      +..+|+.|+++.+.+.+|.+.....            .                    ..++...               
T Consensus       309 ~~~~s~~el~~~i~~~~~~~~~~~~------------~--------------------~~~~~d~---------------  341 (383)
T d1gy8a_         309 SRGYSVREVIEVARKTTGHPIPVRE------------C--------------------GRREGDP---------------  341 (383)
T ss_dssp             SCCEEHHHHHHHHHHHHCCCCCEEE------------E--------------------CCCTTCC---------------
T ss_pred             CCceeHHHHHHHHHHHhCCCCceEE------------C--------------------CCCCCCc---------------
Confidence            9999999999999999987643210            0                    0011100               


Q ss_pred             cccccchhhHhh-cCCCccccCHHHHHHH-HHHHhhC
Q 016047          358 EAKLASMNKSKE-HGFSGFRNSKNSFITW-IDKVKGF  392 (396)
Q Consensus       358 ~~~~~d~~k~~~-lG~~p~~~~~~~~~~~-~~~~~~~  392 (396)
                      ....+|++|+++ |||+|+++++|+|+++ +.|++..
T Consensus       342 ~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         342 AYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             SEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             CEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            134579999997 7999999999999886 6899875

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.4e-33  Score=266.06  Aligned_cols=313  Identities=17%  Similarity=0.083  Sum_probs=201.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC------------CCCCC------------CCCCCeeEEEec
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR------------PKPNW------------NADHLVEYVQCD   80 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~------------~~~~~------------~~~~~v~~~~~D   80 (396)
                      +|||||||||||||++|+++|++     +||+|++++.-            .....            ....+++++++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~-----~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D   75 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSK-----KNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   75 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEcc
Confidence            47999999999999999999999     89999999721            00000            012578999999


Q ss_pred             CCChHHHHHHHhcC--CCeeEEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccc
Q 016047           81 VSDPEETQAKLSQL--TDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFE  153 (396)
Q Consensus        81 l~d~~~~~~~~~~~--~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~  153 (396)
                      |+|.+.+++++.++  |.|+|+|+......     ..+...+++|+.||.|++++|++.+. ..++++.|+..+|+....
T Consensus        76 l~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~-~~~~i~~ss~~~~~~~~~  154 (393)
T d1i24a_          76 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTMGEYGTPNI  154 (393)
T ss_dssp             TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCGGGGCCCSS
T ss_pred             CCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhcc-ccceeecccccccccccc
Confidence            99999999999876  67999987533211     13556789999999999999998764 456666666655543210


Q ss_pred             c----cccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcch---------
Q 016047          154 A----FGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMN---------  215 (396)
Q Consensus       154 ~----~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~---------  215 (396)
                      .    ++.........+|..|..|  ...|+.     |+++..+. ++++++++++||++|||+.......         
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~p--~~~Y~~sK~~aE~~~~~~~-~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  231 (393)
T d1i24a_         155 DIEEGYITITHNGRTDTLPYPKQA--SSFYHLSKVHDSHNIAFTC-KAWGIRATDLNQGVVYGVKTDETEMHEELRNRLD  231 (393)
T ss_dssp             CBCSSEEEEEETTEEEEEECCCCC--CSHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCC
T ss_pred             cccccccccccccccccccccccc--ccHHHHHhhhhcccccccc-cccceeeeecccccccCCCccccccccccccccc
Confidence            0    0000000000111123333  344775     55555444 6778999999999999964321110         


Q ss_pred             ---h-HHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeee-cCCCeeeHHHHHHHH
Q 016047          216 ---L-VGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNC-NNGDVFKWKHLWKVL  290 (396)
Q Consensus       216 ---~-~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni-~~~~~~s~~el~~~l  290 (396)
                         . ...+..+.. ....+.++.+.|++.+.++++|+.|+   +.+++.++.+....++.+++ .+++.+|+.||++++
T Consensus       232 ~~~~~~~~i~~~~~-~~~~~~~~~i~g~~~~~rd~v~v~D~---~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i  307 (393)
T d1i24a_         232 YDAVFGTALNRFCV-QAAVGHPLTVYGKGGQTRGYLDIRDT---VQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLV  307 (393)
T ss_dssp             CSTTTCCHHHHHHH-HHHHTCCEEEETTSCCEEEEEEHHHH---HHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHH
T ss_pred             cccccccchhhhhH-HhhcCCeeEEeeecccccccccccch---HHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHH
Confidence               0 001111111 12246788888999888888888776   77777777665565553332 345679999999999


Q ss_pred             HHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhc
Q 016047          291 AEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEH  370 (396)
Q Consensus       291 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~l  370 (396)
                      .+..+.....+..         ....                     .+ ....           ....+..|++|+++|
T Consensus       308 ~~~~~~~~~~~~~---------~~~~---------------------~~-~~~~-----------~~~~~~~d~~k~~~L  345 (393)
T d1i24a_         308 TKAGSKLGLDVKK---------MTVP---------------------NP-RVEA-----------EEHYYNAKHTKLMEL  345 (393)
T ss_dssp             HHHHHTTTCCCCE---------EEEC---------------------CS-SCSC-----------SSCCCCBCCCHHHHT
T ss_pred             HHHHHhhCCCcce---------eecc---------------------CC-CCCC-----------CccEecCCHHHHHHc
Confidence            8876543222110         0000                     00 0000           001345799999999


Q ss_pred             CCCccccCHHHHHHHHHHHhhC
Q 016047          371 GFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       371 G~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      ||+|+++++++++++++|+++.
T Consensus       346 Gw~P~~~~~~~i~~~~~~~~~~  367 (393)
T d1i24a_         346 GLEPHYLSDSLLDSLLNFAVQF  367 (393)
T ss_dssp             TCCCCCCCHHHHHHHHHHHHHT
T ss_pred             CCccccCHHHHHHHHHHHHHHH
Confidence            9999999999999999998765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=5.8e-33  Score=259.21  Aligned_cols=306  Identities=15%  Similarity=0.139  Sum_probs=203.1

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHhcC--CCe
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLSQL--TDV   97 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~~~--~~V   97 (396)
                      ||||||||||||++|+++|++     +||+|+++++-....       ....++++++.+|+.|.+.+.++++++  |.|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~-----~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALS-----QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHH-----CcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceE
Confidence            799999999999999999999     899999998633221       112368999999999999999999886  779


Q ss_pred             eEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccc-cccCC------CCCCCccCC
Q 016047           98 THIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEA-FGKIK------PYDPPFTED  168 (396)
Q Consensus        98 ~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~-~g~~~------~~~~p~~E~  168 (396)
                      +|+|+......  .++...+++|+.||.||+++|.+.+. .++++++|+..+|...... .....      .......+.
T Consensus        77 ih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~-~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (338)
T d1orra_          77 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNS-NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES  155 (338)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred             EeecccccccccccChHHHHHHHHHHHHHHHHhhhcccc-cccccccccccccccccccccccccccccccccccCcccC
Confidence            99987543322  25678899999999999999998752 3444444433333221000 00000      000111122


Q ss_pred             CCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCC--cchhHHHHHHH-HHHhhhcCCCceecCCc
Q 016047          169 MPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYS--LMNLVGALCVY-AAVCKHEGIPLRFPGTK  240 (396)
Q Consensus       169 ~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~-~~i~~~~~~~~~~~g~~  240 (396)
                      .+..|  ...|+.     |.++..+. +.+++..+++|+..+||+....  .......+... .......+.++.+.|++
T Consensus       156 ~~~~~--~~~y~~~k~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  232 (338)
T d1orra_         156 TQLDF--HSPYGCSKGAADQYMLDYA-RIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG  232 (338)
T ss_dssp             SCCCC--CHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS
T ss_pred             Ccccc--ccccccccchhhhhhhhhh-hccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCC
Confidence            22222  233553     55555544 5678999999999999853221  11222222222 22333457788888998


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCC-CCCCceeeecC--CCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCH
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDP-YAKNEAFNCNN--GDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKL  317 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~-~~~g~~~ni~~--~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  317 (396)
                      .+.++++|+.|+   +++++.++.+. ...+++||+..  +..+++.|+++.+.+.+|.+.....            .  
T Consensus       233 ~~~r~~~~v~D~---~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~------------~--  295 (338)
T d1orra_         233 KQVRDVLHAEDM---ISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTN------------L--  295 (338)
T ss_dssp             CCEEECEEHHHH---HHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEE------------E--
T ss_pred             ceeEeeecccch---hhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEe------------C--
Confidence            888888887776   67777666442 35678999854  4568999999999999987643210            0  


Q ss_pred             HHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          318 AEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       318 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                                        ..++...               ..+..|++|+|+ |||+|+++++|+|+++++|++.
T Consensus       296 ------------------~~~~~~~---------------~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         296 ------------------PVRESDQ---------------RVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             ------------------CCCSSCC---------------SEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             ------------------CCCCCCc---------------CeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence                              0011110               134579999996 6999999999999999999985

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.97  E-value=1.7e-31  Score=251.28  Aligned_cols=298  Identities=15%  Similarity=0.067  Sum_probs=194.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcC--C
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQL--T   95 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~--~   95 (396)
                      .+|||||||||||||++|+++|++     .||+|++++|.....      ....++++++.+|++|++.+.+++..+  +
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~-----~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~   81 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQT-----MGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPE   81 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhh
Confidence            358999999999999999999999     899999999976532      112357999999999999999888765  4


Q ss_pred             CeeEEEEeccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCC
Q 016047           96 DVTHIFYVTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLD  173 (396)
Q Consensus        96 ~V~h~a~~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~  173 (396)
                      .|+|+|+......  ..+...+++|+.|+.+++++|++.+. ...+++.|+..+|       +. .....+..|+.+..|
T Consensus        82 ~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~-~~~~~~~s~~~~~-------~~-~~~~~~~~~~~~~~p  152 (356)
T d1rkxa_          82 IVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGG-VKAVVNITSDKCY-------DN-KEWIWGYRENEAMGG  152 (356)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCC-CCEEEEECCGGGB-------CC-CCSSSCBCTTSCBCC
T ss_pred             hhhhhhccccccccccCCccccccccccchhhhhhhhcccc-ccccccccccccc-------cc-cccccccccccccCC
Confidence            5888766432221  25678899999999999999998753 3444444432222       11 122455666666656


Q ss_pred             CCCcchhH-----HHHHHHHh--------hcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCc
Q 016047          174 APNFYYTL-----EDILFEEV--------EKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTK  240 (396)
Q Consensus       174 ~~~~~y~~-----e~~l~~~~--------~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~  240 (396)
                      ...  |+.     |..+..+.        ....++.++++||+++||+.......+...+.     ....+......+.+
T Consensus       153 ~~~--y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~-----~~~~~~~~~~~~~~  225 (356)
T d1rkxa_         153 YDP--YSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDIL-----RAFEQSQPVIIRNP  225 (356)
T ss_dssp             SSH--HHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHH-----HHHHTTCCEECSCT
T ss_pred             CCc--cccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHH-----HHHhCCCceEEeec
Confidence            543  443     33333221        01346899999999999943222222322221     11123333456667


Q ss_pred             cccceeeecccHHHHHHHHHHHhcCCCC----C--CceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCccc
Q 016047          241 AAWECYSIASDADLIAEHQIWAAVDPYA----K--NEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQR  314 (396)
Q Consensus       241 ~~~~~~~~~~da~~la~~~i~~~~~~~~----~--g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~  314 (396)
                      .+.+.++|+.|+   +.+++.++.....    .  +..++...+..+++.++++.+.+.+|......             
T Consensus       226 ~~~~~~~~v~D~---~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------  289 (356)
T d1rkxa_         226 HAIRPWQHVLEP---LSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ-------------  289 (356)
T ss_dssp             TCEECCEETHHH---HHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEE-------------
T ss_pred             cccccccccccc---cchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEE-------------
Confidence            777777777776   5555555443221    1  22334445567999999999999998764321             


Q ss_pred             CCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhh-cCCCccccCHHHHHHHHHHHhh
Q 016047          315 VKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKG  391 (396)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~  391 (396)
                      ...                  ...+.+.               ..+..|++|+|+ |||+|+++++++|+++++||++
T Consensus       290 ~~~------------------~~~~~~~---------------~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         290 LDG------------------NAHPHEA---------------HYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             C-------------------------CC---------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             EcC------------------CCCCCCc---------------CeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            000                  0001110               134579999996 6999999999999999999875

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.97  E-value=7e-31  Score=245.98  Aligned_cols=301  Identities=17%  Similarity=0.151  Sum_probs=192.0

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ..+.+|+|||||||||||++|+++|++     +||+|++++|+....         ........++.+|+.|.+++.+++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~-----~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLE-----HGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc
Confidence            455578999999999999999999999     899999999964211         011123456889999999999999


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC-CCccCC--
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD-PPFTED--  168 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~-~p~~E~--  168 (396)
                      .+++.|+|+++.... ..++...+.+|+.||.|+|++|++. ..+++++++||..++.      +...... ...+|+  
T Consensus        82 ~~~~~v~~~a~~~~~-~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~~~------~~~~~~~~~~~~e~~~  153 (342)
T d1y1pa1          82 KGAAGVAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSAL------IPKPNVEGIYLDEKSW  153 (342)
T ss_dssp             TTCSEEEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTC------CCCTTCCCCEECTTCC
T ss_pred             ccchhhhhhcccccc-cccccccccchhhhHHHHHHhhhcc-cccccccccccceeec------cCCCCCCCcccccccc
Confidence            999999999875432 3356777899999999999999886 3488889887643221      1110011 112222  


Q ss_pred             --------------CCCCCCCCcchhH-----HHHHHHHhh-cCCCeeEEEEcCCceeecCCCC--cchhHHHHHHHHHH
Q 016047          169 --------------MPRLDAPNFYYTL-----EDILFEEVE-KKEELSWSVHRPDTIFGFSPYS--LMNLVGALCVYAAV  226 (396)
Q Consensus       169 --------------~p~~~~~~~~y~~-----e~~l~~~~~-~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~i  226 (396)
                                    .+..|  ...|+.     |+++..+.. ...+++++++||+.+||+..+.  .......+  ...+
T Consensus       154 ~~~~~~~~~~~~e~~~~~p--~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~--~~~l  229 (342)
T d1y1pa1         154 NLESIDKAKTLPESDPQKS--LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGW--MMSL  229 (342)
T ss_dssp             CHHHHHHHHHSCTTSTTHH--HHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHH--HHHH
T ss_pred             ccccccccccccccCCCCC--cCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHH--HHHH
Confidence                          22112  223664     455544542 2346889999999999963222  11111111  1112


Q ss_pred             hhhcCCCceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhh
Q 016047          227 CKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEE  306 (396)
Q Consensus       227 ~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~  306 (396)
                      ..  +...... .+.+.+.++|+.|+   |++++.++.++...++ ||+++++.+|++|++++|.+.++....+..    
T Consensus       230 ~~--g~~~~~~-~~~~~~~~v~v~Dv---a~~~i~~l~~~~~~g~-~~~~~~~~~t~~eia~~i~k~~p~~~~~~~----  298 (342)
T d1y1pa1         230 FN--GEVSPAL-ALMPPQYYVSAVDI---GLLHLGCLVLPQIERR-RVYGTAGTFDWNTVLATFRKLYPSKTFPAD----  298 (342)
T ss_dssp             HT--TCCCHHH-HTCCSEEEEEHHHH---HHHHHHHHHCTTCCSC-EEEECCEEECHHHHHHHHHHHCTTSCCCCC----
T ss_pred             Hc--CCcCccc-CCccceeeeeHHHH---HHHHHHhhcCccccce-EEEEcCCceEHHHHHHHHHHHcCCCcCCcc----
Confidence            22  2222221 12233566766664   7777777777666555 668888999999999999998743221100    


Q ss_pred             cCCCCcccCCHHHHhccchHHHHHHHHHhCCCcccccccccceeehhhhcCcccccchhhHhhcCCCccccCHHHHHHHH
Q 016047          307 EGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEHGFSGFRNSKNSFITWI  386 (396)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~~~~~~  386 (396)
                              ++                    -.....   ..+          +...+.+++|.+||.|.++++|+|+++|
T Consensus       299 --------~~--------------------~~~~~~---~~~----------~~~~s~~~~k~lg~~~~~~lee~i~d~I  337 (342)
T d1y1pa1         299 --------FP--------------------DQGQDL---SKF----------DTAPSLEILKSLGRPGWRSIEESIKDLV  337 (342)
T ss_dssp             --------CC--------------------CCCCCC---CEE----------CCHHHHHHHHHTTCCSCCCHHHHHHHHH
T ss_pred             --------CC--------------------ccCccc---ccc----------cchHHHHHHHHcCCCCCcCHHHHHHHHH
Confidence                    00                    000000   000          2234667778899999999999999999


Q ss_pred             HHHh
Q 016047          387 DKVK  390 (396)
Q Consensus       387 ~~~~  390 (396)
                      +.++
T Consensus       338 ~s~~  341 (342)
T d1y1pa1         338 GSET  341 (342)
T ss_dssp             CCSC
T ss_pred             HhCc
Confidence            8765

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.96  E-value=8.1e-30  Score=231.66  Aligned_cols=274  Identities=14%  Similarity=0.076  Sum_probs=186.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC--CCeeEEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFY  102 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--~~V~h~a~  102 (396)
                      +|||||||||||||++|+++|.+     +||+|++++|+.              +|+.|.+++++++++.  |.|+|+|+
T Consensus         1 ~MKIlItGasGfiG~~l~~~L~~-----~g~~Vi~~~r~~--------------~D~~d~~~~~~~l~~~~~d~vih~a~   61 (281)
T d1vl0a_           1 HMKILITGANGQLGREIQKQLKG-----KNVEVIPTDVQD--------------LDITNVLAVNKFFNEKKPNVVINCAA   61 (281)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTT-----SSEEEEEECTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEeechh--------------ccCCCHHHHHHHHHHcCCCEEEeecc
Confidence            36899999999999999999998     899999999862              5899999999998864  66999876


Q ss_pred             eccCCC--ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh
Q 016047          103 VTWTNR--STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  180 (396)
Q Consensus       103 ~~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~  180 (396)
                      ......  ..+......|+..+.++++.+....   ..+++.|+..       +|+.  +...+.+|+++..+..  .|+
T Consensus        62 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~~~~ss~~-------v~~~--~~~~~~~e~~~~~~~~--~~~  127 (281)
T d1vl0a_          62 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG---AEIVQISTDY-------VFDG--EAKEPITEFDEVNPQS--AYG  127 (281)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT---CEEEEEEEGG-------GSCS--CCSSCBCTTSCCCCCS--HHH
T ss_pred             ccccccccccchhhccccccccccccccccccc---ccccccccce-------eeec--cccccccccccccchh--hhh
Confidence            533222  1456778899999999999888753   3444444433       3332  1256778887765543  366


Q ss_pred             HHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHH
Q 016047          181 LEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQI  260 (396)
Q Consensus       181 ~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i  260 (396)
                      .++...+.+.++.+.+++++||++|||+  +..  +...+..   .. ..+.++...+  .+.+.++++.|+   +.++.
T Consensus       128 ~~k~~~e~~~~~~~~~~~i~R~~~vyG~--~~~--~~~~~~~---~~-~~~~~~~~~~--~~~~~~i~v~D~---~~~~~  194 (281)
T d1vl0a_         128 KTKLEGENFVKALNPKYYIVRTAWLYGD--GNN--FVKTMIN---LG-KTHDELKVVH--DQVGTPTSTVDL---ARVVL  194 (281)
T ss_dssp             HHHHHHHHHHHHHCSSEEEEEECSEESS--SSC--HHHHHHH---HH-HHCSEEEEES--SCEECCEEHHHH---HHHHH
T ss_pred             hhhhHHHHHHHHhCCCccccceeEEeCC--Ccc--cccchhh---hh-ccCCceeecC--Cceeccchhhhh---hhhhh
Confidence            5555544333556789999999999994  322  2222211   11 1233434444  355566666665   67777


Q ss_pred             HHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCcc
Q 016047          261 WAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPT  340 (396)
Q Consensus       261 ~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  340 (396)
                      .++.+.  ..++||+++++.+|+.|+++.+++.+|.+...            .+++-               +.++.. .
T Consensus       195 ~~~~~~--~~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i------------~~i~~---------------~~~~~~-a  244 (281)
T d1vl0a_         195 KVIDEK--NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKV------------TPCTT---------------EEFPRP-A  244 (281)
T ss_dssp             HHHHHT--CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEE------------EEECS---------------TTSCCS-S
T ss_pred             hhhhhc--ccCceeEeCCCccchHHHHHHHHHHhCCCceE------------EeccH---------------HHcCCc-C
Confidence            666543  34689999999999999999999999987532            11110               001100 0


Q ss_pred             cccccccceeehhhhcCc-ccccchhhHhh-cCCCccccCHHHHHHHHHHHh
Q 016047          341 RLDEVGAWWFVDLVLTGE-AKLASMNKSKE-HGFSGFRNSKNSFITWIDKVK  390 (396)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~  390 (396)
                        .             ++ +.++|++|+++ +||+|. +++|+|+++++++|
T Consensus       245 --~-------------rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         245 --K-------------RPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             --C-------------CCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             --C-------------CccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence              0             01 23469999997 599976 99999999999987

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.5e-28  Score=225.69  Aligned_cols=289  Identities=11%  Similarity=0.086  Sum_probs=162.8

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHH-HHH-----hcCCCeeEE
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ-AKL-----SQLTDVTHI  100 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~-~~~-----~~~~~V~h~  100 (396)
                      |||||||||||++|+++|++     +|+ +|+++++-...... ....+....|+.+.+++. ..+     ..++.|+|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~-----~g~~~V~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   75 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALND-----KGITDILVVDNLKDGTKF-VNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHE   75 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHT-----TTCCCEEEEECCSSGGGG-HHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHh-----CCCCeEEEEECCCCcchh-hcccccchhhhccchHHHHHHhhhhcccchhhhhhh
Confidence            89999999999999999999     785 79998754322100 001111223333333332 222     223446666


Q ss_pred             EEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh
Q 016047          101 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  180 (396)
Q Consensus       101 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~  180 (396)
                      |+.......+.....+.|+.++.+++++++..+  ++++++.|+ .+|      ++.   ...+..|+.+..|...  |+
T Consensus        76 aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--i~~v~~ss~-~~~------~~~---~~~~~~~~~~~~~~~~--Y~  141 (307)
T d1eq2a_          76 GACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--IPFLYASSA-ATY------GGR---TSDFIESREYEKPLNV--YG  141 (307)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT--CCEEEEEEG-GGG------TTC---CSCBCSSGGGCCCSSH--HH
T ss_pred             ccccccccccccccccccccccccccccccccc--ccccccccc-ccc------ccc---cccccccccccccccc--cc
Confidence            654444445677788999999999999999875  444443332 222      221   1223334434333333  55


Q ss_pred             H-----HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcc--hh-HHHHHHHHHHhhhcCCCceecCCccccceeeecccH
Q 016047          181 L-----EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLM--NL-VGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDA  252 (396)
Q Consensus       181 ~-----e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~-~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da  252 (396)
                      .     |+++.++. ++.+++++++||+++||+......  .. ...+.  ..+.. ...+..+.|++.+.+.+.++.|+
T Consensus       142 ~~K~~~e~~~~~~~-~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~g~~~~~r~~~~v~d~  217 (307)
T d1eq2a_         142 YSKFLFDEYVRQIL-PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLN--TQLNN-GESPKLFEGSENFKRDFVYVGDV  217 (307)
T ss_dssp             HHHHHHHHHHHHHG-GGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHH--HHHHC--------------CBCEEEHHHH
T ss_pred             cccchhhhhccccc-cccccccccccceeEeeccccccccccccccccc--ccccc-ccceeeecCccceeeeeeecccH
Confidence            3     66666665 778999999999999995332111  11 11111  11111 12233455777777788888877


Q ss_pred             HHHHHHHHHHhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHH
Q 016047          253 DLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIV  332 (396)
Q Consensus       253 ~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (396)
                         +.++..+...  ...+.||++++...|++|+++.+.+..+.....+           .+.+  +             
T Consensus       218 ---~~~~~~~~~~--~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~-----------~~~~--~-------------  266 (307)
T d1eq2a_         218 ---ADVNLWFLEN--GVSGIFNLGTGRAESFQAVADATLAYHKKGQIEY-----------IPFP--D-------------  266 (307)
T ss_dssp             ---HHHHHHHHHH--CCCEEEEESCSCCBCHHHHHHHC------------------------------------------
T ss_pred             ---HHHHHHHhhh--ccccccccccccchhHHHHHHHHHHhcCCCCeeE-----------eeCC--c-------------
Confidence               5555554443  3457899999999999999999987655321110           0000  0             


Q ss_pred             HHhCCCcccccccccceeehhhhcCcccccchhhHhhc-CCCccccCHHHHHHHHHHH
Q 016047          333 RENQLQPTRLDEVGAWWFVDLVLTGEAKLASMNKSKEH-GFSGFRNSKNSFITWIDKV  389 (396)
Q Consensus       333 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~l-G~~p~~~~~~~~~~~~~~~  389 (396)
                         .+....               ......|++|++++ ||+|.++++|+|+++++|+
T Consensus       267 ---~~~~~~---------------~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~  306 (307)
T d1eq2a_         267 ---KLKGRY---------------QAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL  306 (307)
T ss_dssp             --------C---------------CCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred             ---cCCCCC---------------ceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence               000000               00223599999986 9999999999999999996

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.94  E-value=8e-27  Score=213.20  Aligned_cols=290  Identities=12%  Similarity=0.071  Sum_probs=175.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC--CCeeEEEEe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL--TDVTHIFYV  103 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~--~~V~h~a~~  103 (396)
                      |||||||||||||++|+++|.+     .|+ +++++++...          +.+|++|.+.+++.++++  |.|+|+|+.
T Consensus         1 MKILItG~tGfiG~~l~~~L~~-----~g~-~v~~~~~~~~----------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAP-----VGN-LIALDVHSKE----------FCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTT-----TSE-EEEECTTCSS----------SCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHh-----CCC-EEEEECCCcc----------ccCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            5899999999999999999998     676 4555554322          258999999999999875  789999875


Q ss_pred             ccCC--CccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          104 TWTN--RSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       104 ~~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      +...  ..++...++.|+.++.+++++|++.+  . ++++.||..+|       +.  ....|.+|+.+..|...  |+.
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~-~~~~~ss~~~~-------~~--~~~~~~~E~~~~~p~~~--y~~  130 (298)
T d1n2sa_          65 TAVDKAESEPELAQLLNATSVEAIAKAANETG--A-WVVHYSTDYVF-------PG--TGDIPWQETDATSPLNV--YGK  130 (298)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--C-EEEEEEEGGGS-------CC--CTTCCBCTTSCCCCSSH--HHH
T ss_pred             ccccccccCccccccccccccccchhhhhccc--c-ccccccccccc-------cC--CCCCCCccccccCCCch--Hhh
Confidence            4332  23677788999999999999998864  3 34444433323       22  23678889888766544  554


Q ss_pred             HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHH
Q 016047          182 EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIW  261 (396)
Q Consensus       182 e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~  261 (396)
                      .+...+...........++|++..++. ++.  +....+...   .. ...++...+  .++....++.|+.+....++.
T Consensus       131 ~k~~~e~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~---~~-~~~~~~~~~--~~~~~~~~~~d~~~~~~~~i~  201 (298)
T d1n2sa_         131 TKLAGEKALQDNCPKHLIFRTSWVYAG-KGN--NFAKTMLRL---AK-ERQTLSVIN--DQYGAPTGAELLADCTAHAIR  201 (298)
T ss_dssp             HHHHHHHHHHHHCSSEEEEEECSEECS-SSC--CHHHHHHHH---HH-HCSEEEEEC--SCEECCEEHHHHHHHHHHHHH
T ss_pred             hhhhhhhhHHhhhcccccccccceeec-cCC--ccchhhhhh---hc-ccceeeccc--ceeecccccchHHHHHHHHHh
Confidence            333322221222233445555555442 221  111112111   11 233333333  234455666665443444444


Q ss_pred             HhcCCCCCCceeeecCCCeeeHHHHHHHHHHHhCCCCCCCCchhhcCCCCcccCCHHHHhccchHHHHHHHHHhCCCccc
Q 016047          262 AAVDPYAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDYGLSEEEEEGGGGTQRVKLAEFMKGKEGVWEEIVRENQLQPTR  341 (396)
Q Consensus       262 ~~~~~~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  341 (396)
                      .+......+++||+++++.+++.|+++.+.+..+........         ..+.                   .+....
T Consensus       202 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~-------------------~i~~~~  253 (298)
T d1n2sa_         202 VALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLAL---------TELN-------------------AVPTSA  253 (298)
T ss_dssp             HHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCC---------CEEE-------------------EECSTT
T ss_pred             hhhccccccccccccCCCceecHHHHHHHHhhhhccCccccc---------ccee-------------------eeehhh
Confidence            444444567999999999999999999998877543322110         0000                   000000


Q ss_pred             ccccccceeehhhhcCc-ccccchhhHhh-cCCCccccCHHHHHHHHHHHhhC
Q 016047          342 LDEVGAWWFVDLVLTGE-AKLASMNKSKE-HGFSGFRNSKNSFITWIDKVKGF  392 (396)
Q Consensus       342 ~~~~~~~~~~~~~~~~~-~~~~d~~k~~~-lG~~p~~~~~~~~~~~~~~~~~~  392 (396)
                      +....         .++ +..+|++|+++ +||+|+ +++++|+++++++...
T Consensus       254 ~~~~a---------~RP~~~~ld~~K~~~~~~~~~~-~~~~gl~~~i~~~~~~  296 (298)
T d1n2sa_         254 YPTPA---------SRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTT  296 (298)
T ss_dssp             SCCSS---------CCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred             cCccC---------CCccccccCHHHHHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence            00000         011 33579999997 699986 9999999999998754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.90  E-value=1.9e-24  Score=198.48  Aligned_cols=233  Identities=13%  Similarity=0.097  Sum_probs=160.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC---------CCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      ++||||||||||||++|+++|++     .||+|++++|++....         ....+++++++|+.|.+.+.+++.+++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~-----~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~   77 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASIS-----LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVD   77 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHH-----TTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHh-----CCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcc
Confidence            46799999999999999999999     8999999999764321         123578999999999999999999999


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCC
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAP  175 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~  175 (396)
                      .++|+++...         ...|..++.+++++|.+.. ..++++ .|+          +|.     .+..+..+..+. 
T Consensus        78 ~~~~~~~~~~---------~~~~~~~~~~~l~~a~~~~-~~~~v~-~Ss----------~g~-----~~~~~~~~~~~~-  130 (312)
T d1qyda_          78 VVISALAGGV---------LSHHILEQLKLVEAIKEAG-NIKRFL-PSE----------FGM-----DPDIMEHALQPG-  130 (312)
T ss_dssp             EEEECCCCSS---------SSTTTTTHHHHHHHHHHSC-CCSEEE-CSC----------CSS-----CTTSCCCCCSST-
T ss_pred             hhhhhhhhcc---------cccchhhhhHHHHHHHHhc-CCcEEE-Eee----------ccc-----cCCCcccccchh-
Confidence            8888865322         2346667788899888764 234443 332          221     111222222222 


Q ss_pred             CcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHH
Q 016047          176 NFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLI  255 (396)
Q Consensus       176 ~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~l  255 (396)
                      ..++..++.+.++. ...+++++++||+.+||+..+.........       .....++.+++++.+.+.++++.|+   
T Consensus       131 ~~~~~~~~~~~~~~-~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~i~v~Dv---  199 (312)
T d1qyda_         131 SITFIDKRKVRRAI-EAASIPYTYVSSNMFAGYFAGSLAQLDGHM-------MPPRDKVLIYGDGNVKGIWVDEDDV---  199 (312)
T ss_dssp             THHHHHHHHHHHHH-HHTTCCBCEEECCEEHHHHTTTSSCTTCCS-------SCCSSEECCBTTSCSEEEEECHHHH---
T ss_pred             hhhhHHHHHHHHhh-cccccceEEeccceeecCCccchhhHHHHh-------hhcccccccccccccccceeeHHHH---
Confidence            22233455555554 667899999999999996433222111000       1123345667777777777777765   


Q ss_pred             HHHHHHHhcCCCCCCce-eeecCCCeeeHHHHHHHHHHHhCCCCCC
Q 016047          256 AEHQIWAAVDPYAKNEA-FNCNNGDVFKWKHLWKVLAEQFGIEDYG  300 (396)
Q Consensus       256 a~~~i~~~~~~~~~g~~-~ni~~~~~~s~~el~~~l~~~~g~~~~~  300 (396)
                      |++++.++.++...++. |++++++.+|++|+++.+.+.+|.+...
T Consensus       200 a~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~  245 (312)
T d1qyda_         200 GTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDK  245 (312)
T ss_dssp             HHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred             HHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeE
Confidence            88888888777666665 5666677899999999999999987654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.90  E-value=6.1e-25  Score=200.76  Aligned_cols=226  Identities=13%  Similarity=0.126  Sum_probs=152.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC----------CCCCeeEEEecCCChHHHHHHHhcC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----------ADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----------~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      +|||||||||||||++|+++|++     .||+|++++|.+.....          ...+++++.+|+.+...+.+.+.++
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~-----~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   77 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLD-----LGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHH-----TTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHH-----CCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhc
Confidence            47899999999999999999998     89999999998654311          1347889999999999999999999


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      +.|+|+++.             .++.++.++++++...+  .+++++.|+          ++.      +.++... ...
T Consensus        78 ~~vi~~~~~-------------~~~~~~~~~~~a~~~~~--~~~~~~~s~----------~~~------~~~~~~~-~~~  125 (307)
T d1qyca_          78 DVVISTVGS-------------LQIESQVNIIKAIKEVG--TVKRFFPSE----------FGN------DVDNVHA-VEP  125 (307)
T ss_dssp             SEEEECCCG-------------GGSGGGHHHHHHHHHHC--CCSEEECSC----------CSS------CTTSCCC-CTT
T ss_pred             eeeeecccc-------------cccchhhHHHHHHHHhc--cccceeeec----------ccc------ccccccc-ccc
Confidence            988887542             23345556778777764  445554442          221      0111111 111


Q ss_pred             CCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHH
Q 016047          175 PNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADL  254 (396)
Q Consensus       175 ~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~  254 (396)
                      ...++........+. .+.+++++++||+.+||+.......+..        ....+..+.+++.+.+.+.++++.|+  
T Consensus       126 ~~~~~~~~~~~~~~~-~~~~~~~~i~r~~~v~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dv--  194 (307)
T d1qyca_         126 AKSVFEVKAKVRRAI-EAEGIPYTYVSSNCFAGYFLRSLAQAGL--------TAPPRDKVVILGDGNARVVFVKEEDI--  194 (307)
T ss_dssp             HHHHHHHHHHHHHHH-HHHTCCBEEEECCEEHHHHTTTTTCTTC--------SSCCSSEEEEETTSCCEEEEECHHHH--
T ss_pred             ccccccccccccchh-hccCCCceecccceecCCCccchhhhhh--------hhhhcccceeeecccccccCCcHHHH--
Confidence            111122233333333 5568999999999999954332222110        01123345667777777777776665  


Q ss_pred             HHHHHHHHhcCCCCCCc-eeeecCCCeeeHHHHHHHHHHHhCCCCC
Q 016047          255 IAEHQIWAAVDPYAKNE-AFNCNNGDVFKWKHLWKVLAEQFGIEDY  299 (396)
Q Consensus       255 la~~~i~~~~~~~~~g~-~~ni~~~~~~s~~el~~~l~~~~g~~~~  299 (396)
                       |++++.++..+...++ +||+++++.+|+.|+++.+.+.+|.+..
T Consensus       195 -a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~  239 (307)
T d1qyca_         195 -GTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLE  239 (307)
T ss_dssp             -HHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred             -HHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCc
Confidence             8888877766666665 4667778899999999999999998754

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.5e-22  Score=174.85  Aligned_cols=198  Identities=11%  Similarity=-0.003  Sum_probs=135.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEec
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~~  104 (396)
                      |||+||||||+||++++++|++     +||+|++++|++.+. .....+++++.+|+.|.+++.++++++|.|+|+++..
T Consensus         4 kkIlV~GatG~iG~~v~~~Ll~-----~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~   78 (205)
T d1hdoa_           4 KKIAIFGATGQTGLTTLAQAVQ-----AGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (205)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccC
Confidence            6899999999999999999999     899999999987543 2234679999999999999999999999999987632


Q ss_pred             cCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH-HH
Q 016047          105 WTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-ED  183 (396)
Q Consensus       105 ~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-e~  183 (396)
                      ..     ....+++..+++++++++++++  +++++++|+...|       +..        +.   .+.....|.. ..
T Consensus        79 ~~-----~~~~~~~~~~~~~l~~aa~~~~--v~r~i~~ss~~~~-------~~~--------~~---~~~~~~~~~~~~~  133 (205)
T d1hdoa_          79 ND-----LSPTTVMSEGARNIVAAMKAHG--VDKVVACTSAFLL-------WDP--------TK---VPPRLQAVTDDHI  133 (205)
T ss_dssp             TC-----CSCCCHHHHHHHHHHHHHHHHT--CCEEEEECCGGGT-------SCT--------TC---SCGGGHHHHHHHH
T ss_pred             Cc-----hhhhhhhHHHHHHHHHHHHhcC--CCeEEEEeeeecc-------CCC--------cc---ccccccccchHHH
Confidence            11     1223567889999999999875  7889888754322       210        00   0111111222 22


Q ss_pred             HHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHHHHHh
Q 016047          184 ILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQIWAA  263 (396)
Q Consensus       184 ~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~  263 (396)
                      ...+++ ++.+++||++||+.+++.....                   .. .+..++.....+++..|   +|+.++.++
T Consensus       134 ~~e~~l-~~~~~~~tiirp~~~~~~~~~~-------------------~~-~~~~~~~~~~~~i~~~D---vA~~~~~~l  189 (205)
T d1hdoa_         134 RMHKVL-RESGLKYVAVMPPHIGDQPLTG-------------------AY-TVTLDGRGPSRVISKHD---LGHFMLRCL  189 (205)
T ss_dssp             HHHHHH-HHTCSEEEEECCSEEECCCCCS-------------------CC-EEESSSCSSCSEEEHHH---HHHHHHHTT
T ss_pred             HHHHHH-HhcCCceEEEecceecCCCCcc-------------------cE-EEeeCCCCCCCcCCHHH---HHHHHHHHh
Confidence            223333 5678999999999998732111                   11 11112222234455444   588888888


Q ss_pred             cCCCCCCceeeecC
Q 016047          264 VDPYAKNEAFNCNN  277 (396)
Q Consensus       264 ~~~~~~g~~~ni~~  277 (396)
                      .++...|+.+.++.
T Consensus       190 ~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         190 TTDEYDGHSTYPSH  203 (205)
T ss_dssp             SCSTTTTCEEEEEC
T ss_pred             CCCCCCCEEEecCC
Confidence            88777788887764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.3e-23  Score=180.67  Aligned_cols=207  Identities=15%  Similarity=0.083  Sum_probs=137.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      ++++|||||||||||++|+++|++     +|  ++|++++|++.... ....+++...+|+.+.+++.+++.++|.|+|+
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~-----~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~   87 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILE-----QGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCC   87 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHH-----HTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-----CCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccc
Confidence            357899999999999999999998     56  38999999875432 12357788899999999999999999999998


Q ss_pred             EEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchh
Q 016047          101 FYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYT  180 (396)
Q Consensus       101 a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~  180 (396)
                      ++... ...+..+..++|+.++.+++++|.+.+  +++|+++|+...|       +                 .+...|.
T Consensus        88 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~--v~~fi~~Ss~~~~-------~-----------------~~~~~Y~  140 (232)
T d2bkaa1          88 LGTTR-GKAGAEGFVRVDRDYVLKSAELAKAGG--CKHFNLLSSKGAD-------K-----------------SSNFLYL  140 (232)
T ss_dssp             CCCCH-HHHHHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCC-------T-----------------TCSSHHH
T ss_pred             ccccc-cccchhhhhhhcccccceeeecccccC--ccccccCCccccc-------c-----------------CccchhH
Confidence            65321 122456678999999999999999864  8889887743222       1                 0122377


Q ss_pred             HHHHHHHHhhcCCCe-eEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeeecccHHHHHHHH
Q 016047          181 LEDILFEEVEKKEEL-SWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSIASDADLIAEHQ  259 (396)
Q Consensus       181 ~e~~l~~~~~~~~~~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~da~~la~~~  259 (396)
                      ..|...+....+.++ .++|+||+.+||  ++...+....+.     ..... .  +++... ....+   ++.++|+++
T Consensus       141 ~~K~~~E~~l~~~~~~~~~IlRP~~i~G--~~~~~~~~~~~~-----~~~~~-~--~~~~~~-~~~~I---~~~dvA~a~  206 (232)
T d2bkaa1         141 QVKGEVEAKVEELKFDRYSVFRPGVLLC--DRQESRPGEWLV-----RKFFG-S--LPDSWA-SGHSV---PVVTVVRAM  206 (232)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEEECCEEEC--TTGGGSHHHHHH-----HHHHC-S--CCTTGG-GGTEE---EHHHHHHHH
T ss_pred             HHHHHhhhccccccccceEEecCceeec--CCCcCcHHHHHH-----HHHhh-c--cCCccc-CCCeE---EHHHHHHHH
Confidence            655554443355666 499999999999  443333222221     11111 1  122111 11233   455569999


Q ss_pred             HHHhcCCCCCCceeeecC
Q 016047          260 IWAAVDPYAKNEAFNCNN  277 (396)
Q Consensus       260 i~~~~~~~~~g~~~ni~~  277 (396)
                      +.++..+. .++++.+.+
T Consensus       207 i~~~~~~~-~~~~~i~~~  223 (232)
T d2bkaa1         207 LNNVVRPR-DKQMELLEN  223 (232)
T ss_dssp             HHHHTSCC-CSSEEEEEH
T ss_pred             HHHHhcCc-cCCeEEEcH
Confidence            98886644 355566653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=6.5e-23  Score=181.17  Aligned_cols=226  Identities=14%  Similarity=0.086  Sum_probs=145.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEEe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFYV  103 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~~  103 (396)
                      ++|||||||||||++++++|++     +||  .|++++|++........+++++.+|+.+.+++.++++++|.|+|+++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~-----~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKE-----GSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHH-----TTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHH-----CCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccceeeEEEEee
Confidence            6999999999999999999998     675  477788876432112257899999999999999999999999999875


Q ss_pred             ccCCC---------------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047          104 TWTNR---------------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus       104 ~~~~~---------------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      .....               ........+|+.++.++++.+....  ..++.+.++..       .+.          +.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~-------~~~----------~~  139 (252)
T d2q46a1          79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG--VKHIVVVGSMG-------GTN----------PD  139 (252)
T ss_dssp             CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT--CSEEEEEEETT-------TTC----------TT
T ss_pred             ccccccccchhhhhhcccccccchhhhccccccceeecccccccc--ccccccccccc-------cCC----------CC
Confidence            33111               0234456889999999999887764  34444333111       111          11


Q ss_pred             CCCCCCCCcchhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCCCceecCCccccceeee
Q 016047          169 MPRLDAPNFYYTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGIPLRFPGTKAAWECYSI  248 (396)
Q Consensus       169 ~p~~~~~~~~y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~  248 (396)
                      .+........|..++.+.+....+.+++++++||+++||+.... ....          ......  .....   ..+++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~----------~~~~~~--~~~~~---~~~i~  203 (252)
T d2q46a1         140 HPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV-RELL----------VGKDDE--LLQTD---TKTVP  203 (252)
T ss_dssp             CGGGGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTS-SCEE----------EESTTG--GGGSS---CCEEE
T ss_pred             cccccccccchhhhhhhhhhhhhcccccceeecceEEECCCcch-hhhh----------hccCcc--cccCC---CCeEE
Confidence            11111112224444444443336789999999999999953221 1100          000111  11111   23445


Q ss_pred             cccHHHHHHHHHHHhcCCCCCCceeeecCCC---eeeHHHHHHHHHHHh
Q 016047          249 ASDADLIAEHQIWAAVDPYAKNEAFNCNNGD---VFKWKHLWKVLAEQF  294 (396)
Q Consensus       249 ~~da~~la~~~i~~~~~~~~~g~~~ni~~~~---~~s~~el~~~l~~~~  294 (396)
                      +.|   +|++++.++.++...|++|||+++.   ..+++|+.+++++..
T Consensus       204 ~~D---va~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~  249 (252)
T d2q46a1         204 RAD---VAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT  249 (252)
T ss_dssp             HHH---HHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred             HHH---HHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence            444   5888888888888889999998743   366777777775543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=3.8e-20  Score=160.29  Aligned_cols=147  Identities=17%  Similarity=0.212  Sum_probs=101.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHH-hcCCCeeEEE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKL-SQLTDVTHIF  101 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-~~~~~V~h~a  101 (396)
                      +|+|||||||||||++|+++|++     +|+  +|++++|++....   +.+   ..+..|..++...+ ..+|.|+|++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~-----~~~~~~v~~~~r~~~~~~---~~~---~~~~~d~~~~~~~~~~~~d~vi~~~   70 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILS-----EPTLAKVIAPARKALAEH---PRL---DNPVGPLAELLPQLDGSIDTAFCCL   70 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHH-----CTTCCEEECCBSSCCCCC---TTE---ECCBSCHHHHGGGCCSCCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHh-----CCCeEEEEEEeCCchhhc---ccc---cccccchhhhhhccccchheeeeee
Confidence            48999999999999999999998     676  6888888764422   333   34444444443333 3467788886


Q ss_pred             EeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcchhH
Q 016047          102 YVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFYYTL  181 (396)
Q Consensus       102 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~  181 (396)
                      +.............+.|+.++.+++++|++.+  +++++++|+...|       +                 .+...|..
T Consensus        71 g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--v~~~i~~Ss~~~~-------~-----------------~~~~~y~~  124 (212)
T d2a35a1          71 GTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG--ARHYLVVSALGAD-------A-----------------KSSIFYNR  124 (212)
T ss_dssp             CCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCC-------T-----------------TCSSHHHH
T ss_pred             eeeccccccccccccchhhhhhhccccccccc--ccccccccccccc-------c-----------------ccccchhH
Confidence            54332233556788999999999999999864  7888887743211       1                 11233776


Q ss_pred             HHHHHHHhhcCCCe-eEEEEcCCceeec
Q 016047          182 EDILFEEVEKKEEL-SWSVHRPDTIFGF  208 (396)
Q Consensus       182 e~~l~~~~~~~~~~-~~~ilRp~~v~G~  208 (396)
                      .|...|....+.++ +++|+||+.|||+
T Consensus       125 ~K~~~E~~l~~~~~~~~~I~Rp~~v~G~  152 (212)
T d2a35a1         125 VKGELEQALQEQGWPQLTIARPSLLFGP  152 (212)
T ss_dssp             HHHHHHHHHTTSCCSEEEEEECCSEEST
T ss_pred             HHHHHhhhccccccccceeeCCcceeCC
Confidence            66665544356676 5999999999994

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.80  E-value=1.5e-19  Score=168.77  Aligned_cols=230  Identities=9%  Similarity=-0.078  Sum_probs=140.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHH-HHHHHhcCCCee
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEE-TQAKLSQLTDVT   98 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~-~~~~~~~~~~V~   98 (396)
                      .+|+|||||||||||++|+++|++     +||+|++++|++.+.    ....++++++++|+.|+.+ ++.++.+++.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~-----~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~   76 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAA-----VGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAF   76 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHH-----TTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHh-----CCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence            468999999999999999999999     899999999986542    1133689999999998654 677888777655


Q ss_pred             EEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCCCCcc
Q 016047           99 HIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDAPNFY  178 (396)
Q Consensus        99 h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~~~~~  178 (396)
                      ++..   ..       ...|+..+.+++++|.+++  ++++++.|+...+       .           ..+..+... +
T Consensus        77 ~~~~---~~-------~~~~~~~~~~~~~aa~~ag--v~~~v~~Ss~~~~-------~-----------~~~~~~~~~-~  125 (350)
T d1xgka_          77 INTT---SQ-------AGDEIAIGKDLADAAKRAG--TIQHYIYSSMPDH-------S-----------LYGPWPAVP-M  125 (350)
T ss_dssp             ECCC---ST-------TSCHHHHHHHHHHHHHHHS--CCSEEEEEECCCG-------G-----------GTSSCCCCT-T
T ss_pred             eecc---cc-------cchhhhhhhHHHHHHHHhC--CCceEEEeecccc-------c-----------cCCcccchh-h
Confidence            5421   11       2346778889999999875  3333333321111       0           000011111 1


Q ss_pred             hhHHHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC-CceecCCccccceeeecccHHHHHH
Q 016047          179 YTLEDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI-PLRFPGTKAAWECYSIASDADLIAE  257 (396)
Q Consensus       179 y~~e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~g~~~~~~~~~~~~da~~la~  257 (396)
                      +.......++. .+.+++++++||+..++...+.........      ....+. ....+.++.....++++  .++++.
T Consensus       126 ~~~k~~~~~~~-~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~--~~Dva~  196 (350)
T d1xgka_         126 WAPKFTVENYV-RQLGLPSTFVYAGIYNNNFTSLPYPLFQME------LMPDGTFEWHAPFDPDIPLPWLDA--EHDVGP  196 (350)
T ss_dssp             THHHHHHHHHH-HTSSSCEEEEEECEEGGGCBSSSCSSCBEE------ECTTSCEEEEESSCTTSCEEEECH--HHHHHH
T ss_pred             hhhHHHHHHHH-HhhccCceeeeeceeecccccccccccccc------ccccccceeeecccCCCcceEEEe--HHHHHH
Confidence            22222333343 667899999999988874222111100000      000111 22344444444444443  123455


Q ss_pred             HHHHHhcCC--CCCCceeeecCCCeeeHHHHHHHHHHHhCCCCC
Q 016047          258 HQIWAAVDP--YAKNEAFNCNNGDVFKWKHLWKVLAEQFGIEDY  299 (396)
Q Consensus       258 ~~i~~~~~~--~~~g~~~ni~~~~~~s~~el~~~l~~~~g~~~~  299 (396)
                      ++..+..+.  ...|++|++++ +.+|++|+++.+++.+|.+..
T Consensus       197 ~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~  239 (350)
T d1xgka_         197 ALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVT  239 (350)
T ss_dssp             HHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred             HHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcce
Confidence            555444322  34688999986 679999999999999998753

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.45  E-value=4.8e-13  Score=116.64  Aligned_cols=156  Identities=13%  Similarity=0.072  Sum_probs=107.4

Q ss_pred             cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      +|+.++|++|||||++-||..++++|.+     +|++|++++|+....    .++..+++|++|+++++++++       
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   72 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAA-----DGHKVAVTHRGSGAP----KGLFGVEVDVTDSDAVDRAFTAVEEHQG   72 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSSCCC----TTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCcchh----cCceEEEEecCCHHHHHHHHHHHHHhcC
Confidence            4667889999999999999999999999     899999999986542    467889999999987766553       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|+|+......      ++.+..+++|+.++..+.+++.+.  ..+-.+++.+||...+.      +        
T Consensus        73 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~------~--------  138 (237)
T d1uzma1          73 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW------G--------  138 (237)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------
T ss_pred             CceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc------C--------
Confidence            3677888877532211      145678899999998887766544  22345677776422111      1        


Q ss_pred             ccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                             .+. ...|+.        .+.+...+ ...|+++..+.|+.|.-
T Consensus       139 -------~~~-~~~Y~asKaal~~lt~~lA~e~-~~~gIrVN~I~PG~v~T  180 (237)
T d1uzma1         139 -------IGN-QANYAASKAGVIGMARSIAREL-SKANVTANVVAPGYIDT  180 (237)
T ss_dssp             ---------C-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             -------Ccc-cHHHHHHHHHHHHHHHHHHhhh-hcCCceeeeeeeCcCCC
Confidence                   011 112553        33344333 46789999999998865

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.33  E-value=3.8e-12  Score=111.64  Aligned_cols=156  Identities=12%  Similarity=0.036  Sum_probs=105.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHh-------cCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLS-------QLT   95 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~~   95 (396)
                      .+|++|||||++-||.+++++|.+     +|++|++.+|+.+.. .....+..++++|++|+++++++++       .+|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~-----~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAR-----EGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCC
Confidence            468999999999999999999999     899999999986431 0011245688999999987766554       467


Q ss_pred             CeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccC
Q 016047           96 DVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTE  167 (396)
Q Consensus        96 ~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E  167 (396)
                      .++|+|+......      ++.+..+++|+.|+.++.+++.+.  ..+-.+++.++|...+      .+           
T Consensus        79 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~------~~-----------  141 (248)
T d2d1ya1          79 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL------FA-----------  141 (248)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT------SB-----------
T ss_pred             eEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc------cc-----------
Confidence            7888876432211      145678899999999998888765  2234567766542211      11           


Q ss_pred             CCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          168 DMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       168 ~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                          .+ ....|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       142 ----~~-~~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~v~T  183 (248)
T d2d1ya1         142 ----EQ-ENAAYNASKGGLVNLTRSLALDL-APLRIRVNAVAPGAIAT  183 (248)
T ss_dssp             ----CT-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ----cc-ccchhHHHHHHHHHHHHHHHHHh-hhhCcEEEEEeeCCCCC
Confidence                01 1122553        34444444 45789999999987755

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.31  E-value=1.2e-11  Score=107.89  Aligned_cols=155  Identities=17%  Similarity=0.110  Sum_probs=104.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHh-------cC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLS-------QL   94 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (396)
                      .+|++|||||++-||..++++|.+     +|++|++++|+....  .....+.+.+.+|++|+++++++++       .+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAK-----EGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            358999999999999999999999     899999999975321  0112367889999999988766554       35


Q ss_pred             CCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           95 TDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        95 ~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                      |.++|+|+......      ++.+..+++|+.|+.++.+++.+.  ..+-..++.+|+..       ..+.         
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-------~~~~---------  142 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-------YLGN---------  142 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-------GGCC---------
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-------ccCC---------
Confidence            66788776433211      145778899999999998877665  22234444443210       1110         


Q ss_pred             CCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          167 EDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       167 E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                            + ....|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       143 ------~-~~~~Y~asKaal~~ltk~lA~el-a~~gIrVN~I~PG~v~T  183 (242)
T d1ulsa_         143 ------L-GQANYAASMAGVVGLTRTLALEL-GRWGIRVNTLAPGFIET  183 (242)
T ss_dssp             ------T-TCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ------C-CCcchHHHHHHHHHHHHHHHHHH-hhhCcEEEEEeeCcccC
Confidence                  1 1112553        34444443 45689999999998876

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.30  E-value=2e-11  Score=108.34  Aligned_cols=215  Identities=15%  Similarity=0.126  Sum_probs=128.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .+|.+|||||++-||..++++|++     +|++|++++|+....      ......+.++.+|++|+++++++++     
T Consensus         5 ~gKvalITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVR-----YGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      1123467889999999988776654     


Q ss_pred             --cCCCeeEEEEeccCC----Cc----cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 --QLTDVTHIFYVTWTN----RS----TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~----~~----~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                        .+|.++|+|+.....    .+    +.+..+++|+.|+..+.+++.+.  ..+-..++.+++...+      .+.   
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~------~~~---  150 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF------TAG---  150 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT------CCC---
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccc------ccc---
Confidence              467788887743221    11    35667899999998888876654  1123455555432111      110   


Q ss_pred             CCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchh-HHHHHHHHHHhhhcC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNL-VGALCVYAAVCKHEG  231 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~i~~~~~  231 (396)
                                  +....+|+.        .+.+...+ ...|+++-.+.|+.|-.+.-...... ......   ......
T Consensus       151 ------------~~~~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~---~~~~~~  214 (268)
T d2bgka1         151 ------------EGVSHVYTATKHAVLGLTTSLCTEL-GEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEE---LAHQAA  214 (268)
T ss_dssp             ------------TTSCHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHH---HHHHTC
T ss_pred             ------------cccccccchhHHHHHhCHHHHHHHh-ChhCeEEEecCCCCccChHHhhhhcCCHHHHHH---HHHhcc
Confidence                        101123553        33333333 46789999999998877322121111 111100   011111


Q ss_pred             CCceecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCCe
Q 016047          232 IPLRFPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGDV  280 (396)
Q Consensus       232 ~~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~~  280 (396)
                      .+   .|         -+....++|.++++++.+.  ..-|+++.+.+|-.
T Consensus       215 ~~---~g---------r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t  253 (268)
T d2bgka1         215 NL---KG---------TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT  253 (268)
T ss_dssp             SS---CS---------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cc---CC---------CCcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence            11   11         1123455678888877532  23488888876543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=7e-12  Score=110.44  Aligned_cols=221  Identities=17%  Similarity=0.107  Sum_probs=129.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .+|.+|||||++-||.+++++|.+     +|++|++++|+....         .....++.++.+|++|+++++++++  
T Consensus         2 ~GKvalITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLL-----KGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKV   76 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHH
Confidence            368999999999999999999999     899999999975321         1122467889999999988776654  


Q ss_pred             -----cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHccc----C-CCcceEEEeccceeecccccccccCCCCC
Q 016047           93 -----QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN----A-PNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~-~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                           .+|.++|.|+..  ...+.++.+++|+.++.++..++.+.    . .+-.+++.+||..         |.     
T Consensus        77 ~~~~G~iDilVnnAg~~--~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~---------~~-----  140 (254)
T d2gdza1          77 VDHFGRLDILVNNAGVN--NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA---------GL-----  140 (254)
T ss_dssp             HHHHSCCCEEEECCCCC--CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG---------GT-----
T ss_pred             HHHcCCcCeeccccccc--ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh---------hc-----
Confidence                 356666665532  33467888999999887776666543    1 1124567665422         11     


Q ss_pred             CCccCCCCCCCCCCcchhHHH-----H-----HHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          163 PPFTEDMPRLDAPNFYYTLED-----I-----LFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~e~-----~-----l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                      .+       .|. ...|+..|     +     +...+ ...|+++..+.|+.|--+.-..... ......+.........
T Consensus       141 ~~-------~~~-~~~Y~asKaal~~ltrs~ala~e~-~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~~~~~  210 (254)
T d2gdza1         141 MP-------VAQ-QPVYCASKHGIVGFTRSAALAANL-MNSGVRLNAICPGFVNTAILESIEK-EENMGQYIEYKDHIKD  210 (254)
T ss_dssp             SC-------CTT-CHHHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEEESCBSSHHHHGGGC-HHHHGGGGGGHHHHHH
T ss_pred             cC-------CCC-ccchHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEEEcCCCCChhhhhccc-cccccccHHHHHHHHh
Confidence            00       011 11255321     1     22222 4678999999998774410000000 0000000000000000


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCCCeeeHHH
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNGDVFKWKH  285 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~~~~s~~e  285 (396)
                      .+          ...-+.+..++|.++++++.++..-|+++.+.+|..+.++|
T Consensus       211 ~~----------p~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         211 MI----------KYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             HH----------HHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             cC----------CCCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence            00          00112234456888888887655678999998888877654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.27  E-value=9.2e-12  Score=109.78  Aligned_cols=155  Identities=12%  Similarity=-0.018  Sum_probs=104.7

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      +|++|||||++-||.+++++|++     +|++|++.+|+.+..    .....++..+.+|++|+++++++++       .
T Consensus         5 gK~alVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVR-----EGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHH-----TTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999     899999999975321    0012467889999999988776554       3


Q ss_pred             CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           94 LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      +|.++|.|+......      ++.+..+++|+.|+..+.+++...   ..+-.+++.+||...+.              +
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--------------~  145 (256)
T d1k2wa_          80 IDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR--------------G  145 (256)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--------------C
T ss_pred             ccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc--------------c
Confidence            666777776432211      145678899999999988865542   22345677666422110              0


Q ss_pred             ccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                             .+. ...|..        .+.+...+ ...|+++..+.|+.|-.
T Consensus       146 -------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~V~PG~i~T  187 (256)
T d1k2wa_         146 -------EAL-VGVYCATKAAVISLTQSAGLNL-IRHGINVNAIAPGVVDG  187 (256)
T ss_dssp             -------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCC
T ss_pred             -------ccc-ccchhhhhhHHHHHHHHHHHHh-cccCeEEEEEecCCCCc
Confidence                   011 112543        34444443 45689999999987766

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.26  E-value=1.1e-11  Score=108.27  Aligned_cols=203  Identities=14%  Similarity=0.054  Sum_probs=126.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|++|||||++-||.+++++|++     +|++|++.+|++...    .....++.++++|++|+++++++++       
T Consensus         5 ~gK~alITGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVA-----EGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999     899999999976321    0012467889999999987766554       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|+|+......      ++.+..+++|+.|+.++.+++.+.  ..+--+++.+||...+.              +
T Consensus        80 ~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--------------~  145 (244)
T d1nffa_          80 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA--------------G  145 (244)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------C
T ss_pred             CCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc--------------c
Confidence            3566778776533211      146778999999999988866544  11234567665422110              0


Q ss_pred             ccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhc-CCCce
Q 016047          165 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHE-GIPLR  235 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~-~~~~~  235 (396)
                      .       + ....|+.        .+.+...+ ...|+++..+-|+.|--+....       +      .+.. ..|  
T Consensus       146 ~-------~-~~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~i~T~~~~~-------~------~~~~~~~p--  201 (244)
T d1nffa_         146 T-------V-ACHGYTATKFAVRGLTKSTALEL-GPSGIRVNSIHPGLVKTPMTDW-------V------PEDIFQTA--  201 (244)
T ss_dssp             C-------T-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCSGGGTT-------S------CTTCSCCS--
T ss_pred             c-------c-cccchhhHHHHHHHHHHHHHHHh-cccCEEEEEEeeCCccChhHhh-------h------hHHHHhcc--
Confidence            0       1 0112553        34444444 4678999999998876521000       0      0000 111  


Q ss_pred             ecCCccccceeeecccHHHHHHHHHHHhcCC--CCCCceeeecCCC
Q 016047          236 FPGTKAAWECYSIASDADLIAEHQIWAAVDP--YAKNEAFNCNNGD  279 (396)
Q Consensus       236 ~~g~~~~~~~~~~~~da~~la~~~i~~~~~~--~~~g~~~ni~~~~  279 (396)
                                .--+.+..++|..+++++.+.  ..-|+++.+.+|.
T Consensus       202 ----------l~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         202 ----------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             ----------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ----------ccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence                      111234455688888877532  2348888887654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.8e-11  Score=105.80  Aligned_cols=156  Identities=13%  Similarity=0.086  Sum_probs=104.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHhcCCC---e
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQLTD---V   97 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~---V   97 (396)
                      .+|++|||||++-||.+++++|.+     +|++|++++|+....   ....+++..+.+|++|+++++++++.+..   +
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~-----~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDil   80 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHA-----TGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence            468999999999999999999999     899999999975321   00124678999999999999988876544   5


Q ss_pred             eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      +|+|+......      ++.+..+++|+.++..+.+++.+.   ..+-.+++.++|..         +..     +    
T Consensus        81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~---------~~~-----~----  142 (244)
T d1pr9a_          81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQC---------SQR-----A----  142 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG---------GTS-----C----
T ss_pred             EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccc---------ccc-----c----
Confidence            55544322111      145667899999998888866542   12345666665321         110     0    


Q ss_pred             CCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          169 MPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       169 ~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                         .|. ...|+.        .+.+...+ ...|+++..+.|+.|.-
T Consensus       143 ---~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrvN~I~PG~v~T  184 (244)
T d1pr9a_         143 ---VTN-HSVYCSTKGALDMLTKVMALEL-GPHKIRVNAVNPTVVMT  184 (244)
T ss_dssp             ---CTT-BHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCS
T ss_pred             ---ccc-hhhhhhhHHHHHHHHHHHHHHh-CCCcEEEEEEeeCcCcC
Confidence               011 122543        34444333 45689999999998865

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.25  E-value=3.6e-11  Score=105.28  Aligned_cols=155  Identities=18%  Similarity=0.145  Sum_probs=104.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      +|.+|||||++-||..+++.|.+     .|++|++.+|++...     .....++..+.+|++|+++++++++       
T Consensus         5 gKvalVTGas~GIG~aia~~la~-----~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           5 DKLAVITGGANGIGRAIAERFAV-----EGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999     899999999976421     0112467899999999987766543       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|+|+......      ++.+..+++|+.|+.++.+++.+.  ..+--+++.+||..         +.     .+
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~---------~~-----~~  145 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT---------YW-----LK  145 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG---------GG-----SC
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccch---------hc-----cc
Confidence            4677888877533211      145678899999999988877654  11234566665321         11     00


Q ss_pred             ccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                             .|. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       146 -------~~~-~~~Y~asKaal~~ltk~lA~el-a~~gIrVN~I~PG~i~T  187 (247)
T d2ew8a1         146 -------IEA-YTHYISTKAANIGFTRALASDL-GKDGITVNAIAPSLVRT  187 (247)
T ss_dssp             -------CSS-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCC--
T ss_pred             -------Ccc-cccchhhhccHHHHHHHHHHHh-cccCeEEEEEeeCCCCC
Confidence                   011 112553        34444444 46689999999998865

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.25  E-value=1.3e-11  Score=109.17  Aligned_cols=156  Identities=13%  Similarity=0.054  Sum_probs=105.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .+|.+|||||++-||.+++++|++     +|++|++.+|+....       .  ....++.++.+|++|+++++++++  
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   77 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAA-----QGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNA   77 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975221       0  012367789999999988776654  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                           .+|.++|+|+......      ++....+++|+.|+.++.+++.+.  ..+--+++.++|...+      .+   
T Consensus        78 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~------~~---  148 (260)
T d1x1ta1          78 VRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL------VA---  148 (260)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT------SC---
T ss_pred             HHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce------ec---
Confidence                 3677888877543221      145678899999998888876654  1123467766542211      11   


Q ss_pred             CCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                  .|. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       149 ------------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~I~PG~i~T  190 (260)
T d1x1ta1         149 ------------SAN-KSAYVAAKHGVVGFTKVTALET-AGQGITANAICPGWVRT  190 (260)
T ss_dssp             ------------CTT-CHHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCBCC
T ss_pred             ------------cCC-cchhhhhhhhHHHhHHHHHHHh-chhCcEEEEEecCCCCC
Confidence                        011 112553        34444443 56789999999998865

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.24  E-value=4.8e-11  Score=104.74  Aligned_cols=157  Identities=15%  Similarity=0.039  Sum_probs=104.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      .+|++|||||++-||.+++++|.+     .|++|++.+|+.+..      .....++.++.+|++|+++++++++     
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVE-----EGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999     899999999975321      1123578899999999987766554     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCc-ceEEEeccceeecccccccccCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNL-RHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~-~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                        .+|.++|+|+......      ++....+++|+.|+.++.+++...  ..+. .+++.+||..         |..   
T Consensus        80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~---------~~~---  147 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIE---------GFV---  147 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGG---------GTS---
T ss_pred             hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccc---------eec---
Confidence              3677777776432211      145668899999999988876654  1122 3566665321         210   


Q ss_pred             CCCccCCCCCCCCCCcchhH--------HHHHH-HHhhcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTL--------EDILF-EEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~--------e~~l~-~~~~~~~~~~~~ilRp~~v~G  207 (396)
                        +       .|. ...|+.        .+.+. +.....+|+++..+.|+.|-.
T Consensus       148 --~-------~~~-~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T  192 (251)
T d1zk4a1         148 --G-------DPS-LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKT  192 (251)
T ss_dssp             --C-------CTT-CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCC
T ss_pred             --c-------CCC-chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCC
Confidence              0       011 112553        22222 221246789999999998865

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.24  E-value=3.7e-11  Score=105.42  Aligned_cols=155  Identities=15%  Similarity=0.123  Sum_probs=105.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|.+|||||++-||.+++++|.+     .|++|++++|+....      . ....++..+.+|++|+++++++++     
T Consensus        10 nKvalITGas~GIG~a~a~~la~-----~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAK-----SVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTT-----TSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            68999999999999999999999     899999999975321      0 012467899999999988776664     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.++|.|+......      ++.+..+++|+.++.++.+++.+.  ..+--+++.+||...+.      +      
T Consensus        85 ~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~------~------  152 (251)
T d2c07a1          85 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT------G------  152 (251)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------C------
T ss_pred             cCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC------C------
Confidence              3566777665432211      145678899999998888876654  11245677776432111      0      


Q ss_pred             CCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      .         +. ...|+.        .+.+...+ ...|+++..+.|+.|-.
T Consensus       153 ~---------~~-~~~Y~asKaal~~ltr~lA~el-~~~gIrVN~V~PG~v~T  194 (251)
T d2c07a1         153 N---------VG-QANYSSSKAGVIGFTKSLAKEL-ASRNITVNAIAPGFISS  194 (251)
T ss_dssp             C---------TT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             C---------CC-CHHHHHHHHHHHHHHHHHHHHh-hhhCeEEEEEccCCEec
Confidence            0         11 112553        34444333 46789999999998876

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.22  E-value=4.2e-11  Score=105.69  Aligned_cols=157  Identities=16%  Similarity=0.000  Sum_probs=105.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh--
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      ..+|.+|||||++-||.+++++|.+     .|++|++.+|+....       . ....++..+++|++|+++++++++  
T Consensus         5 L~gK~alITGas~GIG~aia~~la~-----~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~   79 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFAT-----EKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSA   79 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            3568999999999999999999999     899999999975321       0 012467789999999988766554  


Q ss_pred             -----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccC
Q 016047           93 -----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                           .+|.++|+|+......      ++.+..+++|+.|+.++.+++.+.   ...-.+++.+||.         .+. 
T Consensus        80 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~---------~~~-  149 (261)
T d1geea_          80 IKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSV---------HEK-  149 (261)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCG---------GGT-
T ss_pred             HHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccc---------hhc-
Confidence                 4677777776533211      145678899999998888776553   2222345555532         111 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                          .+       .|. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       150 ----~~-------~~~-~~~Y~asKaal~~lt~~lA~e~-~~~gIrVN~I~PG~v~T  193 (261)
T d1geea_         150 ----IP-------WPL-FVHYAASKGGMKLMTETLALEY-APKGIRVNNIGPGAINT  193 (261)
T ss_dssp             ----SC-------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS
T ss_pred             ----cc-------Ccc-ccccccCCccchhhHHHHHHHh-hhhCcEEEEEeeCcCcC
Confidence                00       011 112553        34444444 56789999999998865

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.22  E-value=4.9e-11  Score=104.96  Aligned_cols=154  Identities=14%  Similarity=0.048  Sum_probs=101.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh------
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      |.+|||||++-||..++++|.+     +|++|++.+|+....      . ....++..+.+|++|+++++++++      
T Consensus         2 KValITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVK-----DGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL   76 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CEEEEcCCccHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            4569999999999999999999     899999999975321      0 012467889999999987766553      


Q ss_pred             -cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 -QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                       .+|.++|+|+......      ++.+..+++|+.|+.++.+++.+.   ..+-.+++.+||...+      .+      
T Consensus        77 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------~~------  144 (255)
T d1gega_          77 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH------VG------  144 (255)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------SC------
T ss_pred             CCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhc------cc------
Confidence             3666788776432211      145678899999999998876542   2234556665532111      00      


Q ss_pred             CCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                               .|. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       145 ---------~~~-~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~i~T  186 (255)
T d1gega_         145 ---------NPE-LAVYSSSKFAVRGLTQTAARDL-APLGITVNGYCPGIVKT  186 (255)
T ss_dssp             ---------CTT-BHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBSS
T ss_pred             ---------Ccc-cccchhCHHHHHhhHHHHHHHh-hhhCcEEEEEecCcccC
Confidence                     011 122553        33344333 46789999999987754

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.22  E-value=2.7e-11  Score=106.80  Aligned_cols=156  Identities=17%  Similarity=0.043  Sum_probs=105.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .+|++|||||++-||..++++|++     +|++|++.+|+....         .....++..+.+|++|+++++++++  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~   77 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAA-----EGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT   77 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHH
Confidence            368999999999999999999999     899999999975321         1122467789999999988766553  


Q ss_pred             -----cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccC
Q 016047           93 -----QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                           .+|.++|+|+......       ++.+..+++|+.|+.++.+++...  ..+-.+++.+||...+      .+  
T Consensus        78 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~------~~--  149 (258)
T d1iy8a_          78 TERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI------RG--  149 (258)
T ss_dssp             HHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT------SB--
T ss_pred             HHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc------cC--
Confidence                 4677788776432211       145678899999999998877554  1123456666542211      00  


Q ss_pred             CCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                   .|. ...|+.        .+.+...+ ...|+++..+.|+.|.-
T Consensus       150 -------------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~i~PG~v~T  191 (258)
T d1iy8a_         150 -------------IGN-QSGYAAAKHGVVGLTRNSAVEY-GRYGIRINAIAPGAIWT  191 (258)
T ss_dssp             -------------CSS-BHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCS
T ss_pred             -------------CCC-chHHHHHHHHHHHHHHHHHHHh-CccCceEEEEeeCcccC
Confidence                         011 112553        34444433 46789999999988865

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.18  E-value=3.1e-11  Score=105.95  Aligned_cols=156  Identities=13%  Similarity=0.073  Sum_probs=106.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|++|||||++-||.+++++|++     +|++|++++|+....    .....++.++++|++|+++++++++       
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVA-----AGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999     899999999975321    0012467899999999988766554       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|+|+......      ++.+..+++|+.|+.++.+++.+.  ..+--+++++||...+      .+        
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~------~~--------  144 (254)
T d1hdca_          79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL------MG--------  144 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT------SC--------
T ss_pred             CccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhc------cc--------
Confidence            4667788776533221      145678899999999998877654  1124567776642211      00        


Q ss_pred             ccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                             .+. ...|+.        .+.+...+ ...|+++-.+.|+.|--
T Consensus       145 -------~~~-~~~Y~asKaal~~lt~~lA~e~-a~~gIrVN~I~PG~v~T  186 (254)
T d1hdca_         145 -------LAL-TSSYGASKWGVRGLSKLAAVEL-GTDRIRVNSVHPGMTYT  186 (254)
T ss_dssp             -------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             -------ccc-hhhHHHHHHHHHHHHHHHHHHh-CCCceEEEEeeeCcccC
Confidence                   011 112553        34444443 46789999999988755

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.18  E-value=6.5e-11  Score=104.32  Aligned_cols=156  Identities=14%  Similarity=0.089  Sum_probs=100.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|++|||||++-||..++++|++     .|++|++++|+....      . ....++..+.+|++++++++++++    
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAG-----FGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0 012468899999999987655443    


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.++|+|+......      ++.+..+++|+.|+..+.+++.+.  ..+-.+++++||...+.      +    
T Consensus        82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~------~----  151 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV------S----  151 (259)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------
T ss_pred             HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc------c----
Confidence                2566777766433211      146778899999999888877654  11234566665422110      0    


Q ss_pred             CCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                        .         +. ...|+.        .+.+...+ ...|+++-.+-|+.|--
T Consensus       152 --~---------~~-~~~Y~asKaal~~lt~~lA~e~-~~~gIrVN~V~PG~i~T  193 (259)
T d1xq1a_         152 --A---------SV-GSIYSATKGALNQLARNLACEW-ASDGIRANAVAPAVIAT  193 (259)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEECCSCC-
T ss_pred             --c---------cc-cccccccccchhhhhHHHHHHh-cccCeEEEEeccCcccC
Confidence              0         11 112553        34444443 46789999999998865

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.17  E-value=1.5e-10  Score=101.79  Aligned_cols=156  Identities=19%  Similarity=0.163  Sum_probs=102.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+|+||||||++-||.+++++|++     +|++|++++|++...      . .....+.++.+|+++.++++++++.   
T Consensus         5 ~gK~alITGas~GIG~aia~~la~-----~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAG-----LGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHH
Confidence            568999999999999999999999     899999999985321      0 0124677899999999877665432   


Q ss_pred             -----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           94 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                           .|.++|+|+......      ++....+++|+.++..+.+++...  ..+..+++++||..         +.   
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~---------~~---  147 (258)
T d1ae1a_          80 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIA---------GF---  147 (258)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGG---------GT---
T ss_pred             HhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccc---------cc---
Confidence                 334555555322211      146678899999999888877654  22345667665322         11   


Q ss_pred             CCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                        .+       .|. ...|+.        .+.+...+ ...|+++-.+.|+.|.-
T Consensus       148 --~~-------~~~-~~~Y~~sK~al~~lt~~lA~el-~~~gIrvN~I~PG~i~T  191 (258)
T d1ae1a_         148 --SA-------LPS-VSLYSASKGAINQMTKSLACEW-AKDNIRVNSVAPGVILT  191 (258)
T ss_dssp             --SC-------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBC-
T ss_pred             --cc-------ccc-chhHHHHHHHHHHHHHHHHHhc-CcCcEEEEEEeeCcccC
Confidence              01       011 112542        34444333 45789999999999876

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.17  E-value=5.1e-11  Score=104.99  Aligned_cols=155  Identities=17%  Similarity=0.098  Sum_probs=103.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +|.+|||||++-||.+++++|.+     +|++|++.+|+....      . ....++..+++|++|+++++++++     
T Consensus         2 gKValITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGK-----EGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   76 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            47789999999999999999999     899999999975321      0 012467889999999988766554     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc----CCCcceEEEeccceeecccccccccCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN----APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                        .+|.++|+|+......      ++.+..+++|+.|+.++.+++.+.    ..+-.+++.++|...+      .+    
T Consensus        77 ~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~------~~----  146 (257)
T d2rhca1          77 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK------QG----  146 (257)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT------SC----
T ss_pred             hCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc------cc----
Confidence              3566788776533211      145678899999999999987653    1123456655432111      00    


Q ss_pred             CCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                 .|. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       147 -----------~~~-~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~i~T  188 (257)
T d2rhca1         147 -----------VVH-AAPYSASKHGVVGFTKALGLEL-ARTGITVNAVCPGFVET  188 (257)
T ss_dssp             -----------CTT-CHHHHHHHHHHHHHHHHHHHHT-TTSEEEEEEEEECSBCS
T ss_pred             -----------ccc-chhHHHHHHHHHHHHHHHHHHh-hhhCcEEEEEeeCCCCC
Confidence                       011 112553        34444433 46689999999988754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.3e-10  Score=104.50  Aligned_cols=105  Identities=14%  Similarity=0.053  Sum_probs=79.3

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CC--CCCCeeEEEecCCChHHHHHH
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WN--ADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~--~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      -.+|.+|||||++-||.+++++|++     .|++|++++|+....          ..  ...++..+.+|++|+++++++
T Consensus        10 L~gKvalITGas~GIG~aia~~la~-----~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~   84 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLE-----LGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   84 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHH
Confidence            3579999999999999999999999     899999999974210          11  124678899999999887665


Q ss_pred             Hh-------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc
Q 016047           91 LS-------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        91 ~~-------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      ++       .+|.++|+|+......      ++.+..+++|+.|+..+.+++.+.
T Consensus        85 ~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~  139 (297)
T d1yxma1          85 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS  139 (297)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHh
Confidence            54       4666777766432211      145678899999999988877654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.16  E-value=9.5e-11  Score=102.85  Aligned_cols=101  Identities=15%  Similarity=0.104  Sum_probs=75.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhc-----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ-----   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   93 (396)
                      +|+||||||++-||.+++++|++     +|+  .|++..|+....    .....+++++.+|++|.++++++++.     
T Consensus         3 ~KtilITGassGIG~a~a~~la~-----~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVK-----DKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHT-----CTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            38999999999999999999998     674  688888876432    11235789999999999877654432     


Q ss_pred             ----CCCeeEEEEeccCCC---c----cHHHHHHhHHHHHHHHHHHHc
Q 016047           94 ----LTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVI  130 (396)
Q Consensus        94 ----~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~  130 (396)
                          +|.++|+|+......   .    .....+++|+.|+.++.+++.
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  125 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL  125 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHH
Confidence                566788877432211   1    345678999999988877764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.16  E-value=5.7e-11  Score=104.20  Aligned_cols=157  Identities=17%  Similarity=0.058  Sum_probs=105.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHh---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS---   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~---   92 (396)
                      .+|++|||||++-||..++++|++     +|++|++++|+.+..      .  ....++..+.+|++|+++++++++   
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   78 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAE-----AGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   78 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0  012367789999999987766554   


Q ss_pred             ----cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ----QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ----~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                          .+|.++|+|+......      ++.+..+++|+.|+..+.+++.+.  ..+-.+++.++|...      ..+    
T Consensus        79 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~------~~~----  148 (251)
T d1vl8a_          79 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV------EEV----  148 (251)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG------TCC----
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchh------ccc----
Confidence                4677888877432211      145678899999999988877665  122346665553110      000    


Q ss_pred             CCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                         +       .+ ....|+.        .+.+...+ ...|+++-.+.|+.|-.
T Consensus       149 ---~-------~~-~~~~Y~asKaal~~lt~~lA~e~-~~~gIrVN~I~PG~i~T  191 (251)
T d1vl8a_         149 ---T-------MP-NISAYAASKGGVASLTKALAKEW-GRYGIRVNVIAPGWYRT  191 (251)
T ss_dssp             ---C-------SS-SCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBCS
T ss_pred             ---c-------Cc-cccchHHHHHhHHHHHHHHHHHh-cccCeEEEEEeeCcccC
Confidence               0       01 1112553        34444433 46789999999998866

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.15  E-value=5.3e-11  Score=104.64  Aligned_cols=156  Identities=12%  Similarity=0.033  Sum_probs=104.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|++|||||++-||.+++++|.+     +|++|++++|+....      . ....++..+++|++|+++++++++    
T Consensus        10 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFAT-----AGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHT-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999     899999999975321      0 012467889999999987766543    


Q ss_pred             ---cCCCeeEEEEeccCCC-----ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR-----STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~-----~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                         .+|.++|+|+......     ++.+..+++|+.|+.++.+++...  ..+-..++.+||.         .+.     
T Consensus        85 ~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~---------~~~-----  150 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSM---------AAE-----  150 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG---------GGT-----
T ss_pred             HcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccccccccccccc---------chh-----
Confidence               4677888777533211     145678899999999888876654  1112345555432         111     


Q ss_pred             CCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      .+       .+. ...|+.        .+.+...+ ...|+++..+-|+.|-.
T Consensus       151 ~~-------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~I~PG~i~T  194 (255)
T d1fmca_         151 NK-------NIN-MTSYASSKAAASHLVRNMAFDL-GEKNIRVNGIAPGAILT  194 (255)
T ss_dssp             CC-------CTT-CHHHHHHHHHHHHHHHHHHHHH-HTTTEEEEEEEECSBCS
T ss_pred             cc-------ccc-cccchhHHHHHHHHHHHHHHHh-CccCeEEEEeeeCcCcC
Confidence            00       011 112553        34444443 46789999999998865

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=3.9e-11  Score=105.15  Aligned_cols=156  Identities=12%  Similarity=0.061  Sum_probs=104.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHh-------c
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLS-------Q   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (396)
                      .+|++|||||++-||.++++.|++     +|++|++++|+....   .....++.++.+|++|+++++++++       .
T Consensus         5 ~GK~alITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVN-----SGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGR   79 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            368999999999999999999999     899999999975321   0012467899999999988766554       3


Q ss_pred             CCCeeEEEEeccCCC---c----cHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEeccceeecccccccccCCCCCCCc
Q 016047           94 LTDVTHIFYVTWTNR---S----TEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPF  165 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~---~----~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~  165 (396)
                      +|.++|+|+......   +    +.+..+++|+.|+.++.+++.+. ..+--+++.+||...+      .+      .  
T Consensus        80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~------~~------~--  145 (250)
T d1ydea1          80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA------IG------Q--  145 (250)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHH------HC------C--
T ss_pred             CCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccc------cc------c--
Confidence            667788776432211   1    35677899999999988877755 1111356666542211      00      0  


Q ss_pred             cCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          166 TEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       166 ~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                             +. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       146 -------~~-~~~Y~asKaal~~lt~~lA~e~-a~~gIrVN~I~PG~i~T  186 (250)
T d1ydea1         146 -------AQ-AVPYVATKGAVTAMTKALALDE-SPYGVRVNCISPGNIWT  186 (250)
T ss_dssp             -------TT-CHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECSBCC
T ss_pred             -------cC-cchhHHHHhhHHHHHHHHHHHh-cccCeEEEEEeeCCCCC
Confidence                   11 112553        34444433 46789999999988754

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.14  E-value=4.6e-11  Score=105.42  Aligned_cols=156  Identities=15%  Similarity=0.058  Sum_probs=105.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      .+|.+|||||++-||.++++.|.+     .|++|++++|+....      . ....++..+.+|++|+++++++++    
T Consensus         4 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAE-----EGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR   78 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            368999999999999999999999     899999999975321      0 112467889999999987766554    


Q ss_pred             ---cCCCeeEEEEeccCCC-------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           93 ---QLTDVTHIFYVTWTNR-------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~-------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                         .+|.++|+|+......       ++....+++|+.++.++.+++.+.  ..+--+++++||...+.      +    
T Consensus        79 ~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~------~----  148 (260)
T d1zema1          79 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK------G----  148 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS------C----
T ss_pred             HhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc------C----
Confidence               3666777776432211       145678899999999988877654  12245677666432111      0    


Q ss_pred             CCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                        .         |. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       149 --~---------~~-~~~Y~asKaal~~ltk~lA~el-~~~gIrVN~I~PG~v~T  190 (260)
T d1zema1         149 --P---------PN-MAAYGTSKGAIIALTETAALDL-APYNIRVNAISPGYMGP  190 (260)
T ss_dssp             --C---------TT-BHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCS
T ss_pred             --C---------cc-hHHHHHHHHHHHHHHHHHHHHh-hhhCCEEEEeccCcccC
Confidence              0         11 112553        34444433 45689999999998765

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=1.1e-10  Score=101.81  Aligned_cols=156  Identities=13%  Similarity=0.056  Sum_probs=104.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCChHHHHHHHhcC---CCe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSDPEETQAKLSQL---TDV   97 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~---~~V   97 (396)
                      .+|++|||||++-||..++++|.+     +|++|++++|+.+..   ....+++..+.+|++|+++++++++.+   |.+
T Consensus         4 ~GK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHA-----SGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEE
Confidence            468999999999999999999999     899999999975321   001246889999999999999888764   456


Q ss_pred             eEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc---CCCcceEEEeccceeecccccccccCCCCCCCccCC
Q 016047           98 THIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN---APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTED  168 (396)
Q Consensus        98 ~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~  168 (396)
                      +|+|+......      ++.+..+++|+.++..+.+++.+.   ...-..++.++|...+       .       +    
T Consensus        79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-------~-------~----  140 (242)
T d1cyda_          79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH-------V-------T----  140 (242)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT-------S-------C----
T ss_pred             EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcc-------c-------c----
Confidence            66665422211      145677899999999888866542   1123456655532111       0       0    


Q ss_pred             CCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          169 MPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       169 ~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                         .|. ...|+.        .+.+...+ ...|+++-.+-|+.|-.
T Consensus       141 ---~~~-~~~Y~asKaal~~lt~~lA~e~-~~~gIrvN~I~PG~i~T  182 (242)
T d1cyda_         141 ---FPN-LITYSSTKGAMTMLTKAMAMEL-GPHKIRVNSVNPTVVLT  182 (242)
T ss_dssp             ---CTT-BHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBTT
T ss_pred             ---CCc-cccccchHHHHHHHHHHHHHHh-CccCeecccCCCCCccC
Confidence               011 112553        34444333 45689999999988765

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.14  E-value=3.2e-11  Score=105.31  Aligned_cols=156  Identities=19%  Similarity=0.149  Sum_probs=105.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC----CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW----NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|.+|||||++-||.+++++|++     +|++|++.+|+.+...    ....+...+.+|++|+++++++++       
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~-----~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAA-----RGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            468999999999999999999999     8999999999753210    001357789999999987766554       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCC
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPP  164 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p  164 (396)
                      .+|.++|.|+......      ++.+..+++|+.++..+.+++.+.  ..+-.+++++||...+.      +      . 
T Consensus        78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~------~------~-  144 (243)
T d1q7ba_          78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM------G------N-  144 (243)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------C------C-
T ss_pred             CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC------C------C-
Confidence            3666777766433221      145677899999999998887654  11235677666432111      1      0 


Q ss_pred             ccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          165 FTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       165 ~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                              +. ...|+.        .+.+...+ ..+|+++..+.|+.|--
T Consensus       145 --------~~-~~~Y~asKaal~~lt~~lA~el-a~~gIrVN~I~PG~i~T  185 (243)
T d1q7ba_         145 --------GG-QANYAAAKAGLIGFSKSLAREV-ASRGITVNVVAPGFIET  185 (243)
T ss_dssp             --------TT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             --------CC-CHHHHHHHHHHHHHHHHHHHHh-CccCeEEEEEecceEec
Confidence                    11 112553        34444333 46789999999988754

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.13  E-value=1.1e-10  Score=101.31  Aligned_cols=154  Identities=14%  Similarity=0.071  Sum_probs=101.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCCh-HHHHHHHhcCCCeeEEEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDP-EETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~~~V~h~a~  102 (396)
                      .+|++|||||++-||.+++++|.+     +|++|++.+|+.+..  ...+.+++.+|+++. +.+.+.+..+|.++|.|+
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~-----~Ga~V~~~~r~~~~l--~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG   75 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQ-----EGAEVTICARNEELL--KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAG   75 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHH--HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHH--HhcCCcEEEcchHHHHHHHHHHhCCCcEEEeccc
Confidence            468999999999999999999999     899999999975321  113456889999875 455566667787888776


Q ss_pred             eccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCCCCCCC
Q 016047          103 VTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMPRLDA  174 (396)
Q Consensus       103 ~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p~~~~  174 (396)
                      ......      ++.+..+++|+.++..+.+++.+.  ..+-.+++.++|..       ...       +       .+ 
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~-------~~~-------~-------~~-  133 (234)
T d1o5ia_          76 GPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS-------VIS-------P-------IE-  133 (234)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG-------GTS-------C-------CT-
T ss_pred             ccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccc-------ccc-------c-------cc-
Confidence            432211      145667899999988888776544  11234555554321       111       0       01 


Q ss_pred             CCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          175 PNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       175 ~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      ....|..        .+.+...+ ...|+++-.+.|+.+-.
T Consensus       134 ~~~~Y~asKaal~~ltk~lA~el-a~~gIrVN~I~PG~v~T  173 (234)
T d1o5ia_         134 NLYTSNSARMALTGFLKTLSFEV-APYGITVNCVAPGWTET  173 (234)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSBCC
T ss_pred             ccccchhHHHHHHHHHHHHHHHh-cccCeEEeecccCccch
Confidence            1122442        34444444 46689999999998866

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.12  E-value=8.4e-11  Score=103.78  Aligned_cols=103  Identities=17%  Similarity=0.099  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------C--CCCCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------N--ADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~--~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      ++|++|||||++-||.+++++|++     .|++|++++|+.....      .  ...++..+++|++|+++++++++.  
T Consensus         8 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAA-----AGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHH-----TTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            469999999999999999999999     8999999999865320      0  124678899999999988776643  


Q ss_pred             -----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcc
Q 016047           94 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                           +|.++|+|+......      ++.+..+++|+.|+.++.+++.+
T Consensus        83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  131 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAK  131 (260)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcc
Confidence                 444566554322111      14566889999999888776654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.11  E-value=8.9e-11  Score=103.45  Aligned_cols=156  Identities=20%  Similarity=0.171  Sum_probs=103.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHhc---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLSQ---   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~~---   93 (396)
                      .+|++|||||++-||.+++++|.+     +|++|++.+|+.+..      . ....++.++.+|++|+++++++++.   
T Consensus         7 ~GK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELAS-----LGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321      0 0124677899999999877655432   


Q ss_pred             -----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCC
Q 016047           94 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                           +|.++|+|+......      ++.+..+++|+.|+.++.+++.+.  ..+--+++.++|..         +..  
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~---------~~~--  150 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVS---------GAL--  150 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGG---------GTS--
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccc---------ccc--
Confidence                 455777766432211      145678899999999888877654  12235677665421         110  


Q ss_pred             CCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                         +       .|. ...|..        .+.+...+ ...|+++..+.|+.|--
T Consensus       151 ---~-------~~~-~~~Y~asKaal~~lt~~lA~el-~~~gIrVN~I~PG~i~T  193 (259)
T d2ae2a_         151 ---A-------VPY-EAVYGATKGAMDQLTRCLAFEW-AKDNIRVNGVGPGVIAT  193 (259)
T ss_dssp             ---C-------CTT-CHHHHHHHHHHHHHHHHHHHHT-GGGTEEEEEEEECSBCS
T ss_pred             ---c-------ccc-ccchHHHHHHHHHHHHHHHHHh-CcCceEEEEeeeCcccC
Confidence               0       011 122543        34444333 45689999999988765

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.10  E-value=3.4e-10  Score=99.10  Aligned_cols=104  Identities=13%  Similarity=0.119  Sum_probs=74.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC------CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW------NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      |+||||||++-||..++++|++...  +|++|++.+|+.....      ....++.++.+|++|+++++++++       
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~--~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQ--PPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSS--CCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            6899999999999999999863110  6899999999875430      123578999999999987665443       


Q ss_pred             --cCCCeeEEEEeccCCCc-------cHHHHHHhHHHHHHHHHHHHcc
Q 016047           93 --QLTDVTHIFYVTWTNRS-------TEAENCKINGSMFRNVLRAVIP  131 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~~~  131 (396)
                        .+|.++|.|+.......       .....+++|+.|+..+.+++..
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p  128 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLP  128 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHH
Confidence              25667777664332211       2456789999998888776643

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.10  E-value=1.4e-10  Score=100.96  Aligned_cols=155  Identities=17%  Similarity=0.105  Sum_probs=102.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhc------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQ------   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~------   93 (396)
                      .+|++|||||++-||..++++|.+     +|++|++.+|+....    .....++.++++|++++++++++++.      
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAR-----EGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999     899999999986421    01124678899999999888665543      


Q ss_pred             -CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCCCCcc
Q 016047           94 -LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFT  166 (396)
Q Consensus        94 -~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~  166 (396)
                       +|.++|+|+......      +..+..+++|+.++.++.+++.....+-..++.+|+..       ..        +. 
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a-------~~--------~~-  142 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA-------GL--------GA-  142 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT-------TC--------CH-
T ss_pred             CccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc-------cc--------cc-
Confidence             566777665432211      14567789999999999988776533333333333110       00        00 


Q ss_pred             CCCCCCCCCCcchh-----H---HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          167 EDMPRLDAPNFYYT-----L---EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       167 E~~p~~~~~~~~y~-----~---e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                            | ....|+     .   .+.+...+ ...|+++-.+.|+.|-.
T Consensus       143 ------~-~~~~Y~~sK~al~~lt~~lA~el-~~~gIrvN~I~PG~v~T  183 (241)
T d2a4ka1         143 ------F-GLAHYAAGKLGVVGLARTLALEL-ARKGVRVNVLLPGLIQT  183 (241)
T ss_dssp             ------H-HHHHHHHCSSHHHHHHHHHHHHH-TTTTCEEEEEEECSBCC
T ss_pred             ------c-CccccchhhHHHHHHHHHHHHHH-hHhCCEEeeeccCcCCC
Confidence                  0 011133     2   44454444 56789999999998854

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.08  E-value=5.1e-10  Score=98.08  Aligned_cols=116  Identities=16%  Similarity=0.013  Sum_probs=83.8

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|++|||||++-||.+++++|++     +|++|++.+|+....    .....+..++++|++|+++++++++       
T Consensus         5 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   79 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLG-----EGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999     899999999975321    0012457789999999987765554       


Q ss_pred             cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc-CCCcceEEEecc
Q 016047           93 QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN-APNLRHVCLQTG  144 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~~~~~~s~  144 (396)
                      .+|.++|+|+......      ++.+..+++|+.++..+.+++.+. ..+--+++.+||
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS  138 (253)
T d1hxha_          80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMAS  138 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccc
Confidence            3566788776432211      145678899999998888877655 222356776664

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.1e-10  Score=101.84  Aligned_cols=119  Identities=14%  Similarity=0.051  Sum_probs=86.2

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      ..-.+|.||||||++-||.+++++|.+     +|++|++++|+.+..      . ....++..+.+|++|+++++++++ 
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~-----~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   77 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAK-----LKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK   77 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            345578999999999999999999999     899999999985321      0 122478899999999988776554 


Q ss_pred             ------cCCCeeEEEEeccCCCc------cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEecc
Q 016047           93 ------QLTDVTHIFYVTWTNRS------TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTG  144 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~~------~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~  144 (396)
                            .+|.++|+|+.......      ..+..+++|+.|+.++.+++...  ..+-.+++.+||
T Consensus        78 i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS  143 (244)
T d1yb1a_          78 VKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVAS  143 (244)
T ss_dssp             HHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             HHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeec
Confidence                  34556777664433211      34567899999999888866654  122456776664

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.5e-10  Score=98.74  Aligned_cols=116  Identities=18%  Similarity=0.146  Sum_probs=83.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      .+|.+|||||++-||.++++.|.+     +|++|++.+|+....         .....++..+++|++++++++++++  
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~-----~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQ-----QGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            368999999999999999999999     899999999985321         1112367889999999987765443  


Q ss_pred             -----cCCCeeEEEEeccCC--C----ccHHHHHHhHHHHHHHHHHHHcc----cCCCcceEEEecc
Q 016047           93 -----QLTDVTHIFYVTWTN--R----STEAENCKINGSMFRNVLRAVIP----NAPNLRHVCLQTG  144 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~--~----~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~~~~~~s~  144 (396)
                           .+|.++|+|+.....  .    +..+..+++|+.+..++.+++.+    .+.+-.+++.+||
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS  150 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  150 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEec
Confidence                 467788887653321  1    14567789999998887776543    2323456776664

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.07  E-value=2e-10  Score=102.02  Aligned_cols=156  Identities=12%  Similarity=0.066  Sum_probs=103.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      .+|++|||||++-||.+++++|++     .|++|++.+|+....          .....++..+.+|++|+++++++++ 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   77 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAK-----EGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT   77 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHH
Confidence            368999999999999999999999     899999999975321          1112367899999999987766554 


Q ss_pred             ------cCCCeeEEEEeccCCC------c--cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccc
Q 016047           93 ------QLTDVTHIFYVTWTNR------S--TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFG  156 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~------~--~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g  156 (396)
                            .+|.++|+|+......      +  ..+..+++|+.++..+.+++.+.  ..+-..++.+|+.         .+
T Consensus        78 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~---------~~  148 (274)
T d1xhla_          78 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIV---------AG  148 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG---------GS
T ss_pred             HHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhh---------hc
Confidence                  3577777776432211      1  34667899999999888877654  1123445544321         11


Q ss_pred             cCCCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          157 KIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       157 ~~~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      .     .+       .+. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       149 ~-----~~-------~~~-~~~Y~asKaal~~ltk~lA~el-a~~gIrVN~I~PG~i~T  193 (274)
T d1xhla_         149 P-----QA-------HSG-YPYYACAKAALDQYTRCTAIDL-IQHGVRVNSVSPGAVAT  193 (274)
T ss_dssp             S-----SC-------CTT-SHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBCS
T ss_pred             c-----cc-------CCC-CceehhhhhHHHHHHHHHHHHH-hHhCCceeeeccCCCcC
Confidence            1     00       011 112553        34444444 46789999999998865

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.07  E-value=4.1e-10  Score=99.98  Aligned_cols=157  Identities=16%  Similarity=0.047  Sum_probs=102.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      .+|++|||||++-||..++++|++     +|++|++++|+....        .....++.++.+|++|++++.+.++.  
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~-----~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGR-----RGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            469999999999999999999999     899999998875321        01224678999999999877665543  


Q ss_pred             -----CCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCCC
Q 016047           94 -----LTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                           +|.++|.++......      .+....+++|+.++.++++++...-.+-.+++.+++         ..+..    
T Consensus        92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s---------~~~~~----  158 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS---------ITGQA----  158 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC---------GGGTC----
T ss_pred             HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc---------ccccc----
Confidence                 565666665432211      145667899999999999988776322234444432         11110    


Q ss_pred             CCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                      .+       .+ ....|+.        .+.+...+ ...|+++-.+.|+.|-.
T Consensus       159 ~~-------~~-~~~~Y~asKaal~~ltk~lA~e~-~~~gIrVN~I~PG~v~T  202 (272)
T d1g0oa_         159 KA-------VP-KHAVYSGSKGAIETFARCMAIDM-ADKKITVNVVAPGGIKT  202 (272)
T ss_dssp             SS-------CS-SCHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCBSS
T ss_pred             cc-------cc-chhhHHHHHHHHHHHHHHHHHHh-chhCeEEEEEccCCcCC
Confidence            00       01 1122542        33333333 45689999999998854

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.07  E-value=2.2e-10  Score=101.76  Aligned_cols=105  Identities=13%  Similarity=0.121  Sum_probs=78.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ..+|++|||||++-||.+++++|.+     .|++|++++|+....          .....++..+.+|++|+++++++++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~-----~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   77 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQ-----EGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIIN   77 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHH
Confidence            3468999999999999999999999     899999999975321          1112367899999999987766554


Q ss_pred             -------cCCCeeEEEEeccCCC------c----cHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 -------QLTDVTHIFYVTWTNR------S----TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~~~------~----~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                             .+|.++|+|+......      +    .....+++|+.++.++.+++...
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~  134 (272)
T d1xkqa_          78 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH  134 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccc
Confidence                   4677888776533211      1    24567899999999888877654

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.05  E-value=6.4e-10  Score=97.92  Aligned_cols=152  Identities=19%  Similarity=0.133  Sum_probs=100.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC---------C-CCCCCeeEEEecCCChHHHHHHHhc
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN---------W-NADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~---------~-~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      +.+||||||+|-||..++++|.+     +|+ .|+++.|+....         . ....++.++.+|++|++++++++..
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~-----~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLAR-----RGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHH-----HTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHH-----CCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence            36999999999999999999998     788 578788863221         0 0124678999999999999888876


Q ss_pred             CC------CeeEEEEeccCCCc------cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccCCCC
Q 016047           94 LT------DVTHIFYVTWTNRS------TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKIKPY  161 (396)
Q Consensus        94 ~~------~V~h~a~~~~~~~~------~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~~~~  161 (396)
                      +.      .|+|+++.......      .....+++|+.|+.++.++++...  ..+++++||...      .+|.    
T Consensus        84 i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~--~~~iv~~SS~a~------~~g~----  151 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD--LTAFVLFSSFAS------AFGA----  151 (259)
T ss_dssp             SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC--CSEEEEEEEHHH------HTCC----
T ss_pred             ccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC--CceEeeecchhh------ccCC----
Confidence            43      36666554322111      234567999999999998887643  456666554321      2221    


Q ss_pred             CCCccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          162 DPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       162 ~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                 +. ...|+.     +.+..+ . +..|++++.+.|+.+.+
T Consensus       152 -----------~~-~~~YaAaka~l~~la~~-~-~~~Gi~v~~I~pg~~~~  188 (259)
T d2fr1a1         152 -----------PG-LGGYAPGNAYLDGLAQQ-R-RSDGLPATAVAWGTWAG  188 (259)
T ss_dssp             -----------TT-CTTTHHHHHHHHHHHHH-H-HHTTCCCEEEEECCBC-
T ss_pred             -----------cc-cHHHHHHHHhHHHHHHH-H-HhCCCCEEECCCCcccC
Confidence                       00 111554     333222 2 45689999999998877

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.05  E-value=1.6e-10  Score=100.48  Aligned_cols=153  Identities=12%  Similarity=0.090  Sum_probs=100.7

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcE-------EEEEeCCCCCC-------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWK-------VYGVARRPKPN-------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~-------V~~l~R~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      -||||||++-||.+++++|.+     +|++       |++.+|+....       .....++.++.+|++|+++++++++
T Consensus         3 VvlITGas~GIG~aia~~la~-----~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~   77 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFAR-----AARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTT   77 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHH-----HTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHH-----hCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            379999999999999999998     7776       88888875321       0112467789999999987766554


Q ss_pred             -------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccccc
Q 016047           93 -------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        93 -------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                             .+|.++|+|+......      ++.+..+++|+.|+..+.+++...  ..+-.+++.+||...+       . 
T Consensus        78 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-------~-  149 (240)
T d2bd0a1          78 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT-------K-  149 (240)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-------S-
T ss_pred             HHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc-------C-
Confidence                   3667778776432211      145678899999999888877654  1123456666542211       0 


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                            +       .|. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       150 ------~-------~~~-~~~Y~asK~al~~lt~~la~el-~~~gIrvn~i~PG~v~T  192 (240)
T d2bd0a1         150 ------A-------FRH-SSIYCMSKFGQRGLVETMRLYA-RKCNVRITDVQPGAVYT  192 (240)
T ss_dssp             ------C-------CTT-CHHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCBCS
T ss_pred             ------C-------CCC-ChHHHHHHHHHHHHHHHHHHHh-CcCCeEEEEeeeCcccC
Confidence                  0       011 112553        34444444 56789999999988755

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.03  E-value=6.7e-10  Score=97.38  Aligned_cols=154  Identities=12%  Similarity=0.042  Sum_probs=102.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCC-ChHHHHHHH---
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVS-DPEETQAKL---   91 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~-d~~~~~~~~---   91 (396)
                      .+|+||||||++-||..++++|++     +|++|+++.|+....        .....++.++.+|++ +.+++++++   
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~-----~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~   78 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVK-----RNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHH-----CCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHH
Confidence            468999999999999999999999     899999998875431        112346788999998 444444433   


Q ss_pred             ----hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHccc-----CCCcceEEEeccceeecccccccccCCCCC
Q 016047           92 ----SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPN-----APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        92 ----~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                          ..+|.++++|+.  ...++.+..+++|+.|+.++..++.+.     .....+++.++|...+.      +      
T Consensus        79 ~~~~g~iDilvnnAG~--~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~------~------  144 (254)
T d1sbya1          79 FDQLKTVDILINGAGI--LDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN------A------  144 (254)
T ss_dssp             HHHHSCCCEEEECCCC--CCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------C------
T ss_pred             HHHcCCCCEEEeCCCC--CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc------C------
Confidence                335666666552  234477889999999998888866654     11235677665422110      0      


Q ss_pred             CCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                               .+. ...|+.        .+.+...+ ...|+++..+.|+.|..
T Consensus       145 ---------~~~-~~~Y~asKaal~~~t~~la~el-~~~gIrVn~I~PG~v~T  186 (254)
T d1sbya1         145 ---------IHQ-VPVYSASKAAVVSFTNSLAKLA-PITGVTAYSINPGITRT  186 (254)
T ss_dssp             ---------CTT-SHHHHHHHHHHHHHHHHHHHHH-HHHSEEEEEEEECSEES
T ss_pred             ---------CCC-CHHHHHHHHHHHHHHHHHHhhc-cccCeEEEEEEeCCCcC
Confidence                     011 112553        34444443 45689999999998876

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.02  E-value=2.9e-10  Score=100.51  Aligned_cols=104  Identities=17%  Similarity=0.155  Sum_probs=77.4

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh-
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      .+|.+|||||++-||..++++|++     +|++|++++|+....          .....++..+.+|++|+++++++++ 
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~-----~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~   78 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAR-----EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST   78 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999     899999999975321          1122468899999999987766554 


Q ss_pred             ------cCCCeeEEEEeccCCC----------ccHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 ------QLTDVTHIFYVTWTNR----------STEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~----------~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                            .+|.++|+|+......          ++.+..+++|+.|+.++.+++.+.
T Consensus        79 ~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~  134 (264)
T d1spxa_          79 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH  134 (264)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCc
Confidence                  4677888876432110          135667899999998888877654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.00  E-value=3.2e-10  Score=99.94  Aligned_cols=106  Identities=17%  Similarity=-0.016  Sum_probs=78.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh-
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS-   92 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~-   92 (396)
                      |-.+|+||||||++-||.+++++|++     .|++|++..|+....       . ....++..+.+|++|++++++.++ 
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~-----~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~   77 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGR-----RGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK   77 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHH
Confidence            44568999999999999999999999     899999877664321       0 012467899999999987766554 


Q ss_pred             ------cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 ------QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 ------~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                            .+|.++|+|+......      +..+..+++|+.+..++++++...
T Consensus        78 ~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  129 (259)
T d1ja9a_          78 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH  129 (259)
T ss_dssp             HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh
Confidence                  3555777766432221      145677899999998888877765

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.2e-09  Score=95.32  Aligned_cols=157  Identities=10%  Similarity=0.063  Sum_probs=103.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC--CCCCCCCeeEEEecCCChHHHHHHHh---cCCCee
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP--NWNADHLVEYVQCDVSDPEETQAKLS---QLTDVT   98 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~~~V~   98 (396)
                      .+|++|||||++-||+++++.|++     +|++|++++|++..  ......+++...+|+.+.+.++....   .+|.++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~-----~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAR-----EGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEE
Confidence            368999999999999999999999     89999999998532  11223578889999988876665554   456678


Q ss_pred             EEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCCC
Q 016047           99 HIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDMP  170 (396)
Q Consensus        99 h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~p  170 (396)
                      |+++......      +.....+++|+.++..+.+++...  ..+--.+++++|.         .+..    .      +
T Consensus        80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~---------~~~~----~------~  140 (245)
T d2ag5a1          80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSV---------ASSV----K------G  140 (245)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS---------BTTT----B------C
T ss_pred             ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeech---------hhcc----C------C
Confidence            8776543211      145677899999999998877653  1123355555421         1100    0      0


Q ss_pred             CCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          171 RLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       171 ~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                       .+ ....|+.        .+.+...+ ...|+++..+.|+.|-.
T Consensus       141 -~~-~~~~Y~~sKaal~~l~r~lA~e~-~~~gIrvN~I~PG~i~T  182 (245)
T d2ag5a1         141 -VV-NRCVYSTTKAAVIGLTKSVAADF-IQQGIRCNCVCPGTVDT  182 (245)
T ss_dssp             -CT-TBHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEESCEEC
T ss_pred             -cc-chhHHHHHHHHHHHHHHHHHHHh-hhhCcEEEEEeeceeec
Confidence             01 1122553        23333333 46689999999998876

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.97  E-value=3.7e-10  Score=98.46  Aligned_cols=154  Identities=16%  Similarity=0.052  Sum_probs=102.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      +-||||||++-||.+++++|++     .|++|++.+++....       . ....++.++++|++|+++++++++     
T Consensus         2 pV~lITGas~GIG~a~a~~la~-----~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGK-----AGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA   76 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999     899998876653211       0 012467789999999988766554     


Q ss_pred             --cCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCC
Q 016047           93 --QLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYD  162 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~  162 (396)
                        .+|.++|+|+......      ++.+..+++|+.|+.++.+++.+.  ..+--+++.+||...+.      +      
T Consensus        77 ~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~------~------  144 (244)
T d1edoa_          77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI------G------  144 (244)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH------C------
T ss_pred             cCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC------C------
Confidence              3566777766432211      145678899999999988877654  11235677766432221      1      


Q ss_pred             CCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          163 PPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       163 ~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                               .+. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       145 ---------~~~-~~~Y~asKaal~~ltk~lA~el-~~~gIrvN~I~PG~i~T  186 (244)
T d1edoa_         145 ---------NIG-QANYAAAKAGVIGFSKTAAREG-ASRNINVNVVCPGFIAS  186 (244)
T ss_dssp             ---------CTT-CHHHHHHHHHHHHHHHHHHHHH-HTTTEEEEEEEECSBCS
T ss_pred             ---------CCC-CHHHHHHHHHHHHChHHHHHHH-hhhCcEEEEEecceecc
Confidence                     011 112553        34444444 56789999999987754

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.97  E-value=2e-09  Score=94.52  Aligned_cols=156  Identities=15%  Similarity=0.028  Sum_probs=97.9

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      .+|++|||||+|  -||.+++++|++     .|++|++..|+....      .....+...+++|++|+++++++++.  
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~-----~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKE-----AGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHH-----CCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHH
Confidence            468999999997  699999999999     899998888864321      00123567899999999887766543  


Q ss_pred             -----CCCeeEEEEeccC---C---Cc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeecccccccccC
Q 016047           94 -----LTDVTHIFYVTWT---N---RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGKI  158 (396)
Q Consensus        94 -----~~~V~h~a~~~~~---~---~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~~  158 (396)
                           +|.++|+|+....   .   .+    +....+++|+.++..+.+++...-.+-.+++.+||..         +. 
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~---------~~-  151 (256)
T d1ulua_          82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYA---------SE-  151 (256)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGG---------GT-
T ss_pred             HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehH---------hc-
Confidence                 4556666553210   0   01    3445789999999998887765421223455554311         11 


Q ss_pred             CCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          159 KPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       159 ~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                          .+       .|. ...|+.        .+.+...+ ...|+++-.+.|+.|.-
T Consensus       152 ----~~-------~~~-~~~Y~asKaal~~ltr~lA~el-a~~gIrVN~I~PG~i~t  195 (256)
T d1ulua_         152 ----KV-------VPK-YNVMAIAKAALEASVRYLAYEL-GPKGVRVNAISAGPVRT  195 (256)
T ss_dssp             ----SB-------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTCEEEEEEECCC--
T ss_pred             ----CC-------CCC-chHHHHHHHHHHHHHHHHHHHh-cccCCEEeeeccceeee
Confidence                00       011 112553        34444444 45789999999998876

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.93  E-value=4.2e-09  Score=94.34  Aligned_cols=101  Identities=19%  Similarity=0.111  Sum_probs=72.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C--CCCCCeeEEEecCCChHHHHHHHh----
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W--NADHLVEYVQCDVSDPEETQAKLS----   92 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~--~~~~~v~~~~~Dl~d~~~~~~~~~----   92 (396)
                      +|++|||||+|-||.+++++|++     .|++|++++|+....      .  .....+..+.+|+++.+++++++.    
T Consensus        25 gK~alITGas~GIG~aiA~~la~-----~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          25 GKVAFITGGGTGLGKGMTTLLSS-----LGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            48999999999999999999999     899999999985321      0  012467789999999988766543    


Q ss_pred             ---cCCCeeEEEEeccCCCc------cHHHHHHhHHHHHHHHHHHHc
Q 016047           93 ---QLTDVTHIFYVTWTNRS------TEAENCKINGSMFRNVLRAVI  130 (396)
Q Consensus        93 ---~~~~V~h~a~~~~~~~~------~~~~~~~~nv~gt~~ll~a~~  130 (396)
                         .+|.++|+|+.......      +....+.+|+.+...+...+.
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  146 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIG  146 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhh
Confidence               35667777664332211      345567888888777655443

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=4.5e-09  Score=92.38  Aligned_cols=159  Identities=12%  Similarity=-0.005  Sum_probs=99.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHhcC-
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQL-   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~~~-   94 (396)
                      +|.++||||++-||..++++|.+..  .+|++|++++|+....         .....++..+.+|+++++++++++..+ 
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~--~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLL--SPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTB--CTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcc--cCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            4788999999999999999996310  0699999999975321         011236788999999999887765331 


Q ss_pred             ----------CCeeEEEEeccCCC---------ccHHHHHHhHHHHHHHHHHHHcccCC----CcceEEEeccceeeccc
Q 016047           95 ----------TDVTHIFYVTWTNR---------STEAENCKINGSMFRNVLRAVIPNAP----NLRHVCLQTGTKHYLGP  151 (396)
Q Consensus        95 ----------~~V~h~a~~~~~~~---------~~~~~~~~~nv~gt~~ll~a~~~~~~----~~~~~~~~s~~~~y~ss  151 (396)
                                +.+++.|+......         +.....+++|+.|+.++.+++.+.-.    .-.+++++||..     
T Consensus        84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~-----  158 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC-----  158 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG-----
T ss_pred             HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccc-----
Confidence                      12444444322111         13456789999999999888876521    134677665421     


Q ss_pred             ccccccCCCCCCCccCCCCCCCCCCcchhH-----HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          152 FEAFGKIKPYDPPFTEDMPRLDAPNFYYTL-----EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       152 ~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~-----e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                          +.     .+       .+. ...|+.     +.+.+....+..|+++..+.|+.|-.
T Consensus       159 ----~~-----~~-------~~~-~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T  202 (259)
T d1oaaa_         159 ----AL-----QP-------YKG-WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN  202 (259)
T ss_dssp             ----GT-----SC-------CTT-CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred             ----cc-----CC-------Ccc-chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCC
Confidence                11     01       011 112553     22222222246789999999988866

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=4.9e-09  Score=93.37  Aligned_cols=154  Identities=19%  Similarity=0.138  Sum_probs=96.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE---eCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV---ARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l---~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      |-||||||++-||.+++++|.+     .|.+|+.+   .|+....          .....++..+.+|++|++++.+++.
T Consensus         3 kVvlITGassGIG~a~A~~la~-----~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~   77 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLAS-----DPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARE   77 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHT-----CTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHH-----CCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhh
Confidence            4578999999999999999998     77765444   4443211          1123578899999999999988776


Q ss_pred             cC-----CCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCC
Q 016047           93 QL-----TDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIK  159 (396)
Q Consensus        93 ~~-----~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~  159 (396)
                      .+     |.+++.++......      +.....+++|+.|+.++.+++...  ..+-.+++.+||..         |.. 
T Consensus        78 ~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~---------g~~-  147 (285)
T d1jtva_          78 RVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVG---------GLM-  147 (285)
T ss_dssp             TCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGG---------GTS-
T ss_pred             hccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechh---------hcC-
Confidence            54     33555554322211      145667899999998888876543  11234566665421         210 


Q ss_pred             CCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          160 PYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       160 ~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                          +       .|. ...|+.        .+.+...+ ...|+++..+.|+.|--
T Consensus       148 ----~-------~~~-~~~Y~asKaal~~l~~~la~El-~~~gIrVn~V~PG~v~T  190 (285)
T d1jtva_         148 ----G-------LPF-NDVYCASKFALEGLCESLAVLL-LPFGVHLSLIECGPVHT  190 (285)
T ss_dssp             ----C-------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCC
T ss_pred             ----C-------CCC-chHHHHHHHHHHHHHHHHHHHh-hccCcEEEEEecCCCCC
Confidence                0       011 112553        23333333 56789999999998754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.89  E-value=4.7e-09  Score=90.88  Aligned_cols=112  Identities=11%  Similarity=-0.021  Sum_probs=73.9

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHH-------HHh--cCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQA-------KLS--QLT   95 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~-------~~~--~~~   95 (396)
                      +|+||||||+|-||.+++++|.+     +|++|.+++|......   .......+|..+.+..+.       .+.  .+|
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~-----~G~~V~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRA-----RNWWVASIDVVENEEA---SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESSCCTTS---SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEeCCccccc---cccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            58999999999999999999999     8999999998754321   223345566655543322       222  256


Q ss_pred             CeeEEEEecc--CC-Cc----cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEecc
Q 016047           96 DVTHIFYVTW--TN-RS----TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTG  144 (396)
Q Consensus        96 ~V~h~a~~~~--~~-~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~  144 (396)
                      .++|+|+...  .. ..    ..+..+++|+.++.++.+++.+.-.+-.+++++||
T Consensus        74 ~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS  129 (236)
T d1dhra_          74 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGA  129 (236)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEcc
Confidence            6778776311  11 11    24557899999999888877765222345666553

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.85  E-value=1.7e-09  Score=96.06  Aligned_cols=104  Identities=16%  Similarity=0.105  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C--CCCCCeeEEEecCCChHHHHHHHh-------
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W--NADHLVEYVQCDVSDPEETQAKLS-------   92 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~--~~~~~v~~~~~Dl~d~~~~~~~~~-------   92 (396)
                      .+|++|||||++-||.+++++|.+     +|++|++++|+.+..  .  ....++..+.+|++++++++++++       
T Consensus         4 ~gK~alITGas~GIG~aia~~la~-----~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVA-----EGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            358999999999999999999999     899999999975321  0  011467889999999987766554       


Q ss_pred             cCCCeeEEEEeccCCC-------c----cHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 QLTDVTHIFYVTWTNR-------S----TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~-------~----~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                      .+|.++|+|+......       +    ..+..+++|+.|+.++.+++.+.
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~  129 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPA  129 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHH
Confidence            4566777766422111       1    24567899999998888777554

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.82  E-value=5.5e-10  Score=97.89  Aligned_cols=154  Identities=15%  Similarity=0.057  Sum_probs=96.4

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHH-------HhcCCCee
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAK-------LSQLTDVT   98 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~-------~~~~~~V~   98 (396)
                      ++|||||++-||..++++|.+     +|++|++.+|+...... ......+..+|+++.++++++       +..+|.++
T Consensus         2 TAlVTGas~GiG~aiA~~la~-----~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSE-----AGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHH-----TTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            689999999999999999999     89999999987543100 000112446788777544433       33577788


Q ss_pred             EEEEeccCCCc-------cHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeecccccccccCCCCCCCccCCC
Q 016047           99 HIFYVTWTNRS-------TEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAFGKIKPYDPPFTEDM  169 (396)
Q Consensus        99 h~a~~~~~~~~-------~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~g~~~~~~~p~~E~~  169 (396)
                      |+|+.......       +....+++|+.++.++.+++.+.  ..+--+++.+||..       .+.       +     
T Consensus        77 nNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~-------~~~-------~-----  137 (252)
T d1zmta1          77 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSAT-------PFG-------P-----  137 (252)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCST-------TTS-------C-----
T ss_pred             ECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccc-------ccc-------c-----
Confidence            88764322111       35567899999998888876654  11234566665321       111       0     


Q ss_pred             CCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeec
Q 016047          170 PRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGF  208 (396)
Q Consensus       170 p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~  208 (396)
                        .+. ...|+.        .+.+...+ ...|+++-.+.|+.|-..
T Consensus       138 --~~~-~~~Y~asKaal~~lt~~lA~el-a~~gIrVN~I~PG~i~T~  180 (252)
T d1zmta1         138 --WKE-LSTYTSARAGACTLANALSKEL-GEYNIPVFAIGPNYLHSE  180 (252)
T ss_dssp             --CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTCCEEEEEESSBCCB
T ss_pred             --ccc-ccccccccccHHHHHHHHHHHh-cccCcEEEEEecCCCcCc
Confidence              011 112553        34444444 567899999999998763

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.82  E-value=7.9e-09  Score=92.68  Aligned_cols=154  Identities=12%  Similarity=0.039  Sum_probs=100.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCC-------------CCCeeEEEecCCChHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNA-------------DHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~-------------~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      .+|.+|||||++-||..++++|.+     +|++|++.+|+.......             ........+|+.|.+++++.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~-----~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAE-----RGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHH-----TTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH
Confidence            468999999999999999999999     899999998875422100             01234677898887654443


Q ss_pred             H-------hcCCCeeEEEEeccCCC------ccHHHHHHhHHHHHHHHHHHHccc--CCCcceEEEeccceeeccccccc
Q 016047           91 L-------SQLTDVTHIFYVTWTNR------STEAENCKINGSMFRNVLRAVIPN--APNLRHVCLQTGTKHYLGPFEAF  155 (396)
Q Consensus        91 ~-------~~~~~V~h~a~~~~~~~------~~~~~~~~~nv~gt~~ll~a~~~~--~~~~~~~~~~s~~~~y~ss~~~~  155 (396)
                      +       ..+|.++|+|+......      ++.+..+++|+.|+.++.+++...  ..+--+++.+||...+      +
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~------~  154 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI------Y  154 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH------H
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhc------C
Confidence            3       34777888877543221      145678899999999998877654  1123567776643211      1


Q ss_pred             ccCCCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCce
Q 016047          156 GKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTI  205 (396)
Q Consensus       156 g~~~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v  205 (396)
                      |.               +. ...|+.        .+.+.... ...|+++..+.|+.+
T Consensus       155 ~~---------------~~-~~~Y~asKaal~~lt~~la~E~-~~~gIrVN~I~PG~~  195 (302)
T d1gz6a_         155 GN---------------FG-QANYSAAKLGLLGLANTLVIEG-RKNNIHCNTIAPNAG  195 (302)
T ss_dssp             CC---------------TT-CHHHHHHHHHHHHHHHHHHHHT-GGGTEEEEEEEEECC
T ss_pred             CC---------------CC-cHHHHHHHHHHHHHHHHHHHHH-hccCCceeeeCCCCC
Confidence            11               11 112553        33444333 567899999998755

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.80  E-value=8.6e-09  Score=89.13  Aligned_cols=110  Identities=13%  Similarity=0.030  Sum_probs=72.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHH-------HHH--hcCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQ-------AKL--SQLTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~-------~~~--~~~~~   96 (396)
                      .|||||||+|-||.+++++|.+     +|++|++++|+.....   .....+.+|..+.+...       ..+  ..+|.
T Consensus         3 gkVlITGas~GIG~aia~~l~~-----~G~~V~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKK-----NGYTVLNIDLSANDQA---DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHH-----TTEEEEEEESSCCTTS---SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHH-----CCCEEEEEECCchhcc---cccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            5899999999999999999999     8999999999865421   23345566766554322       222  22566


Q ss_pred             eeEEEEeccC--C--Cc---cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEec
Q 016047           97 VTHIFYVTWT--N--RS---TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQT  143 (396)
Q Consensus        97 V~h~a~~~~~--~--~~---~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s  143 (396)
                      ++|+|+....  .  ..   ..+..+++|+.++.++.+++...-.+-.+++++|
T Consensus        75 linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~is  128 (235)
T d1ooea_          75 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTG  128 (235)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             EEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEec
Confidence            7887764221  1  11   2344689999999888887766521223555554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.4e-09  Score=96.59  Aligned_cols=117  Identities=15%  Similarity=0.035  Sum_probs=81.5

Q ss_pred             CEE-EEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------C-CCCCCeeEEEecCCChHHHHHHHh-----
Q 016047           26 SVA-LIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------W-NADHLVEYVQCDVSDPEETQAKLS-----   92 (396)
Q Consensus        26 ~~i-LVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~-~~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (396)
                      |+| |||||++-||..++++|++.    .|++|++.+|+....      . ....++.++.+|++|.++++++++     
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~----~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRL----FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE   78 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHH----SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHh----CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHh
Confidence            455 99999999999999999861    388999999985321      0 012468899999999987765443     


Q ss_pred             --cCCCeeEEEEeccCCCc------cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccce
Q 016047           93 --QLTDVTHIFYVTWTNRS------TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTK  146 (396)
Q Consensus        93 --~~~~V~h~a~~~~~~~~------~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~  146 (396)
                        .+|.++|.|+.......      +....+++|+.|+..+.+++...-.+-.+++.++|..
T Consensus        79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~  140 (275)
T d1wmaa1          79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  140 (275)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence              35557777664332211      2345789999999999998876522224566666543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=7.2e-09  Score=91.55  Aligned_cols=105  Identities=12%  Similarity=0.038  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHh--
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLS--   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~--   92 (396)
                      -.+|++|||||++-||.+++++|++     +|++|++++|+....        ......+..+.+|+.+.+.......  
T Consensus        12 L~GK~alITGassGIG~aiA~~la~-----~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   86 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAK-----MGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA   86 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHH-----CCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHH
Confidence            4579999999999999999999999     899999999975321        0112456788999998876544333  


Q ss_pred             -----cCCCeeEEEEeccCCC----c--cHHHHHHhHHHHHHHHHHHHccc
Q 016047           93 -----QLTDVTHIFYVTWTNR----S--TEAENCKINGSMFRNVLRAVIPN  132 (396)
Q Consensus        93 -----~~~~V~h~a~~~~~~~----~--~~~~~~~~nv~gt~~ll~a~~~~  132 (396)
                           ..|.+++.|+......    +  .....+++|+.|+..+.+++...
T Consensus        87 ~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~  137 (269)
T d1xu9a_          87 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM  137 (269)
T ss_dssp             HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHH
Confidence                 3444555554322211    1  34567899999988887776543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.74  E-value=1e-07  Score=82.25  Aligned_cols=203  Identities=16%  Similarity=0.101  Sum_probs=114.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc----CC--Cee
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ----LT--DVT   98 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----~~--~V~   98 (396)
                      +|++|||||++-||.+++++|.+     .|++|++++|+...     .+...+++|+.+......+...    ..  .+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~-----~Ga~V~i~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~   70 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKA-----RGYRVVVLDLRREG-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVV   70 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHH-----HTCEEEEEESSCCS-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCccc-----ccceEeeccccchhhhHHHHHhhhccccccchh
Confidence            47999999999999999999999     89999999998643     3567889999988655444332    11  122


Q ss_pred             EEEEeccC------CC----ccHHHHHHhHHHHHHHHHHHHccc--------CCCcceEEEeccceeecccccccccCCC
Q 016047           99 HIFYVTWT------NR----STEAENCKINGSMFRNVLRAVIPN--------APNLRHVCLQTGTKHYLGPFEAFGKIKP  160 (396)
Q Consensus        99 h~a~~~~~------~~----~~~~~~~~~nv~gt~~ll~a~~~~--------~~~~~~~~~~s~~~~y~ss~~~~g~~~~  160 (396)
                      +.++....      ..    ...+..+++|+.+..+++..+...        ..+-.+++.+||...+.      +    
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~------~----  140 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE------G----  140 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH------C----
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc------C----
Confidence            22111100      00    134566789998888777655432        11234677666432211      0    


Q ss_pred             CCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceeecCCCCcchhHHHHHHHHHHhhhcCC
Q 016047          161 YDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFGFSPYSLMNLVGALCVYAAVCKHEGI  232 (396)
Q Consensus       161 ~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~i~~~~~~  232 (396)
                        .         +. ...|+.        .+.+...+ ...|+++-.+.|+.|--+......  ....   ....  ...
T Consensus       141 --~---------~~-~~~Y~asKaal~~lt~~lA~el-a~~gIrVN~V~PG~i~T~~~~~~~--~~~~---~~~~--~~~  200 (241)
T d1uaya_         141 --Q---------IG-QAAYAASKGGVVALTLPAAREL-AGWGIRVVTVAPGLFDTPLLQGLP--EKAK---ASLA--AQV  200 (241)
T ss_dssp             --C---------TT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECSCSSHHHHTSC--HHHH---HHHH--TTC
T ss_pred             --C---------CC-chhhHHHHHHHHHHHHHHHHHH-hhcCCceeeecCCcccccccchhh--hhHH---HHHH--hcC
Confidence              0         11 112553        33344333 467899999999988652111111  0000   0001  111


Q ss_pred             CceecCCccccceeeecccHHHHHHHHHHHhcCCCCCCceeeecCC
Q 016047          233 PLRFPGTKAAWECYSIASDADLIAEHQIWAAVDPYAKNEAFNCNNG  278 (396)
Q Consensus       233 ~~~~~g~~~~~~~~~~~~da~~la~~~i~~~~~~~~~g~~~ni~~~  278 (396)
                      |  ..+      .   .....++|..+++++.+...-|+++.+.+|
T Consensus       201 ~--~~~------R---~g~pedvA~~v~fL~s~~~iTG~~i~VDGG  235 (241)
T d1uaya_         201 P--FPP------R---LGRPEEYAALVLHILENPMLNGEVVRLDGA  235 (241)
T ss_dssp             C--SSC------S---CCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             C--CCC------C---CcCHHHHHHHHHHHHhCCCCCCCEEEECCc
Confidence            2  111      1   123445577777777654455788888665

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.1e-07  Score=82.75  Aligned_cols=157  Identities=13%  Similarity=0.020  Sum_probs=98.8

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC----CCCCeeEEEecCCChHHHHHHHh------
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN----ADHLVEYVQCDVSDPEETQAKLS------   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~------   92 (396)
                      -++|.+|||||++-||.+++++|.+     +|++|++++|+......    ...+.....+|+.+.+.++....      
T Consensus         3 lkGKvalITGas~GIG~aia~~la~-----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVG-----QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccc
Confidence            3578999999999999999999999     89999999998643200    12466788999998866544332      


Q ss_pred             -cCCCeeEEEEeccCC------C------ccHHHHHHhHHHHHHHHHHHHccc--------CCCcceEEEeccceeeccc
Q 016047           93 -QLTDVTHIFYVTWTN------R------STEAENCKINGSMFRNVLRAVIPN--------APNLRHVCLQTGTKHYLGP  151 (396)
Q Consensus        93 -~~~~V~h~a~~~~~~------~------~~~~~~~~~nv~gt~~ll~a~~~~--------~~~~~~~~~~s~~~~y~ss  151 (396)
                       ..|.+.+.+......      .      +..+..+++|+.++.++.+++.+.        ..+-.+++++||...+.+ 
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~-  156 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG-  156 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC-
Confidence             234344333221110      0      134567899999999988877543        112235776664322210 


Q ss_pred             ccccccCCCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          152 FEAFGKIKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       152 ~~~~g~~~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                                          .|. ...|+.        .+.+...+ ...|+++..+.|+.+.-
T Consensus       157 --------------------~~~-~~~Y~asKaal~~lt~~la~e~-~~~gIrvN~I~PG~i~T  198 (248)
T d2o23a1         157 --------------------QVG-QAAYSASKGGIVGMTLPIARDL-APIGIRVMTIAPGLFGT  198 (248)
T ss_dssp             --------------------CTT-CHHHHHHHHHHHHHHHHHHHHH-GGGTEEEEEEEECCBCC
T ss_pred             --------------------CCC-chHHHHHHHHHHHHHHHHHHHh-cccCcceeeeccCceec
Confidence                                011 112553        34444333 46689999999998865

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=98.66  E-value=1.1e-07  Score=83.13  Aligned_cols=156  Identities=10%  Similarity=0.009  Sum_probs=95.8

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhc--
Q 016047           24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQ--   93 (396)
Q Consensus        24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~--   93 (396)
                      .+|+||||||+|  -||.++++.|++     +|++|++.+|+....      .........+.+|+.+..+....+..  
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~-----~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHR-----EGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHH-----TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHH-----cCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhh
Confidence            468999999998  689999999999     899999999975421      00123567889999998776555533  


Q ss_pred             -----CCCeeEEEEeccCCC---c--------cHHHHHHhHHHHHHHHHHHHcccCCCcceEEEeccceeeccccccccc
Q 016047           94 -----LTDVTHIFYVTWTNR---S--------TEAENCKINGSMFRNVLRAVIPNAPNLRHVCLQTGTKHYLGPFEAFGK  157 (396)
Q Consensus        94 -----~~~V~h~a~~~~~~~---~--------~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~~~s~~~~y~ss~~~~g~  157 (396)
                           .|.++|.++......   .        .......+|+.+...+++++.....+-..++.+|+..   +   ..  
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~---~---~~--  150 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLG---A---ER--  150 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGG---G---TS--
T ss_pred             hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchh---h---cc--
Confidence                 223555543321111   0        1233557888888888887776522223344444211   0   00  


Q ss_pred             CCCCCCCccCCCCCCCCCCcchhH--------HHHHHHHhhcCCCeeEEEEcCCceee
Q 016047          158 IKPYDPPFTEDMPRLDAPNFYYTL--------EDILFEEVEKKEELSWSVHRPDTIFG  207 (396)
Q Consensus       158 ~~~~~~p~~E~~p~~~~~~~~y~~--------e~~l~~~~~~~~~~~~~ilRp~~v~G  207 (396)
                            +       .|. ...|+.        .+.+...+ ...|+++-.+.|+.|..
T Consensus       151 ------~-------~~~-~~~Y~~sKaal~~ltr~lA~el-~~~gIrVN~I~PG~i~T  193 (258)
T d1qsga_         151 ------A-------IPN-YNVMGLAKASLEANVRYMANAM-GPEGVRVNAISAGPIRT  193 (258)
T ss_dssp             ------B-------CTT-TTHHHHHHHHHHHHHHHHHHHH-TTTTEEEEEEEECCCCC
T ss_pred             ------C-------CCC-cHHHHHHHHHHHHHHHHHHHHh-CccCceeeccccccccc
Confidence                  0       011 112553        34444444 56789999999999986

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.64  E-value=2.4e-09  Score=89.58  Aligned_cols=77  Identities=17%  Similarity=0.069  Sum_probs=63.9

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +-.+|+||||||+|.||..+++.|.+     .|++|++++|+....      .....++.+..+|+.|.+++.+++.++|
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~-----~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iD   94 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAG-----EGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAH   94 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCS
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHh-----hccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcC
Confidence            44579999999999999999999999     899999999985321      1111355678999999999999999999


Q ss_pred             CeeEEEEe
Q 016047           96 DVTHIFYV  103 (396)
Q Consensus        96 ~V~h~a~~  103 (396)
                      .|+|+++.
T Consensus        95 ilin~Ag~  102 (191)
T d1luaa1          95 FVFTAGAI  102 (191)
T ss_dssp             EEEECCCT
T ss_pred             eeeecCcc
Confidence            99998763

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=98.52  E-value=3.3e-06  Score=74.09  Aligned_cols=64  Identities=16%  Similarity=-0.011  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARRPKPN------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      .+|++|||||+|  -||.+++++|++     +|++|++++|+....      ........++.+|+++.+++.+++.
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~-----~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~   75 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFN-----QGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYN   75 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHT-----TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHH-----CCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHH
Confidence            468999999988  699999999999     899999999975321      0012355688999999987666553

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.32  E-value=3.5e-06  Score=74.74  Aligned_cols=35  Identities=17%  Similarity=0.092  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCC--hhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           24 YQSVALIVGVTG--IVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        24 ~~~~iLVtGatG--fiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      .+|++|||||+|  -||..++++|.+     +|.+|++..|.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~-----~Ga~Vvi~~~~   43 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAA-----AGAEILVGTWV   43 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEEEH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHH-----CCCEEEEEeCc
Confidence            468999999987  799999999999     89999998874

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.32  E-value=2.7e-06  Score=74.35  Aligned_cols=63  Identities=10%  Similarity=-0.042  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCCh--hHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHH
Q 016047           23 SYQSVALIVGVTGI--VGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAK   90 (396)
Q Consensus        23 ~~~~~iLVtGatGf--iG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~   90 (396)
                      ..+|++|||||+|.  ||.+++++|.+     +|++|++..|+....     .....+...+++|+++++++.++
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~-----~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~   73 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQE-----QGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASL   73 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHH-----TTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHH-----cCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccc
Confidence            34689999998764  99999999999     899999999875321     11224567899999998755443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=98.27  E-value=7.6e-06  Score=71.96  Aligned_cols=99  Identities=16%  Similarity=0.039  Sum_probs=65.0

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CC---------------CCCCeeEEEec
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WN---------------ADHLVEYVQCD   80 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~---------------~~~~v~~~~~D   80 (396)
                      -+|||||++-||.+++++|.+     .|++|++.+|++...           ..               ....+....+|
T Consensus         4 VAlITGas~GIG~aiA~~la~-----~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d   78 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHA-----EGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   78 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHH-----cCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeeccccccccccccccccc
Confidence            579999999999999999999     899999888764210           00               01123345677


Q ss_pred             CCChHHHHHHH-------hcCCCeeEEEEeccCCC--c----c--------------HHHHHHhHHHHHHHHHHHHc
Q 016047           81 VSDPEETQAKL-------SQLTDVTHIFYVTWTNR--S----T--------------EAENCKINGSMFRNVLRAVI  130 (396)
Q Consensus        81 l~d~~~~~~~~-------~~~~~V~h~a~~~~~~~--~----~--------------~~~~~~~nv~gt~~ll~a~~  130 (396)
                      +++.+++++++       ..+|.++|+|+......  +    .              ....+.+|+.+...+.+++.
T Consensus        79 v~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  155 (284)
T d1e7wa_          79 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  155 (284)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeecccc
Confidence            88888776655       34677888877533211  0    0              11356889999888877654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.05  E-value=3.5e-06  Score=66.04  Aligned_cols=110  Identities=15%  Similarity=0.105  Sum_probs=74.8

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ||.|+||+|++|+.++..|..++...   ++..++..+...    ............-+ ...+..+.++++|.|+..|+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~---elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVS---RLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCS---EEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHTTCSEEEECCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccc---eEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhCCCCEEEECCC
Confidence            79999999999999999998844332   788888754211    00001111111112 23455677899998888877


Q ss_pred             eccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047          103 VTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus       103 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                      .......+..+....|+.-++.+++.+.+++++...++
T Consensus        78 ~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiiv  115 (144)
T d1mlda1          78 VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI  115 (144)
T ss_dssp             CCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            55444457788899999999999999999876544433

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.98  E-value=9.4e-06  Score=70.24  Aligned_cols=89  Identities=15%  Similarity=0.201  Sum_probs=60.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh--------cCCCe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS--------QLTDV   97 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------~~~~V   97 (396)
                      |.||||||++-||.+++++|.+     .|++|++++|+...          ...|+.+.+.......        .+|.+
T Consensus         2 kVvlITGas~GIG~aiA~~la~-----~Ga~V~~~~~~~~~----------~~~d~~~~~~~~~~~~~~~~~~~~~id~l   66 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEA-----AGHQIVGIDIRDAE----------VIADLSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEEESSSSS----------EECCTTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECChHH----------HHHHhcCHHHHHHHHHHHHHHhCCCCcEE
Confidence            6789999999999999999999     89999999987432          2567777765443322        23445


Q ss_pred             eEEEEeccCCCccHHHHHHhHHHHHHHHHHHHc
Q 016047           98 THIFYVTWTNRSTEAENCKINGSMFRNVLRAVI  130 (396)
Q Consensus        98 ~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~  130 (396)
                      +++|+.. ...........+|..+...+.+...
T Consensus        67 v~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~   98 (257)
T d1fjha_          67 VLCAGLG-PQTKVLGNVVSVNYFGATELMDAFL   98 (257)
T ss_dssp             EECCCCC-TTCSSHHHHHHHHTHHHHHHHHHHH
T ss_pred             EEcCCCC-CcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            5554421 1222345566778888777665443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.79  E-value=3.3e-05  Score=62.39  Aligned_cols=122  Identities=16%  Similarity=0.052  Sum_probs=72.1

Q ss_pred             cccccCcCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCC--CCcEEEEEeCCCCCC----------CCCCCCee-EEEec
Q 016047           14 KFEEDEPARSYQSVALIVGVTGIVGNSLAEILPLPDTPG--GPWKVYGVARRPKPN----------WNADHLVE-YVQCD   80 (396)
Q Consensus        14 ~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~--~g~~V~~l~R~~~~~----------~~~~~~v~-~~~~D   80 (396)
                      |.+...++.....||.||||+|.||++++..|.+..-..  ....++.++......          ....+... .+.++
T Consensus        13 ~~~~~~~~~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~   92 (175)
T d7mdha1          13 KAEDKTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGI   92 (175)
T ss_dssp             --------CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES
T ss_pred             ccchhhhccCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccc
Confidence            444444444555689999999999999999987522110  112456566543110          00111222 11121


Q ss_pred             CCChHHHHHHHhcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceEE
Q 016047           81 VSDPEETQAKLSQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHVC  140 (396)
Q Consensus        81 l~d~~~~~~~~~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~~  140 (396)
                           +..+++.++|.|+-+++....+..+..+.+..|..-.+.+.+++.+..++-.+++
T Consensus        93 -----~~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vl  147 (175)
T d7mdha1          93 -----DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVL  147 (175)
T ss_dssp             -----CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred             -----cchhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEE
Confidence                 2356789999888887655444457888999999999999999999754333343

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.77  E-value=3.2e-06  Score=65.44  Aligned_cols=67  Identities=15%  Similarity=0.113  Sum_probs=51.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHH-HhcCCCee
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAK-LSQLTDVT   98 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~   98 (396)
                      |+|+|.|+ |.+|+.|++.|.+     .|++|+++++++...  .....++.++.||.+|++.++++ +..++.++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~-----~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv   70 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSE-----KGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYI   70 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHH-----CCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhc
Confidence            58999996 9999999999998     899999999986421  10112678999999999988775 34455333

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.72  E-value=3.8e-05  Score=66.60  Aligned_cols=73  Identities=15%  Similarity=0.089  Sum_probs=50.5

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------C--CCCCCeeEEEecCCCh----HHHHH----
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------W--NADHLVEYVQCDVSDP----EETQA----   89 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------~--~~~~~v~~~~~Dl~d~----~~~~~----   89 (396)
                      .+|||||++-||..++++|++     .|++|++++|+....       .  ........+..|+.+.    +.+.+    
T Consensus         3 vAlVTGas~GIG~aia~~la~-----~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQ-----QGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   77 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHH-----CCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHH
Confidence            579999999999999999999     899999999985421       0  0123455666666442    22322    


Q ss_pred             ---HHhcCCCeeEEEEec
Q 016047           90 ---KLSQLTDVTHIFYVT  104 (396)
Q Consensus        90 ---~~~~~~~V~h~a~~~  104 (396)
                         .+..+|.++|.|+..
T Consensus        78 ~~~~~g~iDilvnnAG~~   95 (266)
T d1mxha_          78 SFRAFGRCDVLVNNASAY   95 (266)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCCCEEEECCccC
Confidence               334577788887754

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.71  E-value=5.9e-05  Score=58.88  Aligned_cols=103  Identities=13%  Similarity=0.045  Sum_probs=69.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-------------CCCCCCeeEEEecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-------------WNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-------------~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      |||.|+||+|.+|+.++..|...+..   -++..+++++...             .....+++....--.|.    +.++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~---~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~   73 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFM---KDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIID   73 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTC---CEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcc---cccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhc
Confidence            58999999999999999999883322   2899998764210             11112333322111122    3577


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCC
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPN  135 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~  135 (396)
                      ++|.|+-+|+.......+..+.+..|..-.+.+.+.+.+++++
T Consensus        74 ~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~  116 (145)
T d1hyea1          74 ESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDT  116 (145)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             cceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCC
Confidence            8888777766544444467888999999999999999887653

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.61  E-value=8e-05  Score=57.79  Aligned_cols=101  Identities=16%  Similarity=0.091  Sum_probs=70.1

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC--CC----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK--PN----------WNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~--~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      ||.|+||+|.+|+.++..|..++...   ++..++....  ..          ........+..+|.   +    .+.++
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~---el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~a   71 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIAD---EVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGS   71 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCS---EEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCC---EEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----Hhhhc
Confidence            79999999999999999998743332   7888885321  00          01123445555553   2    35788


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      |.|+-.|+....+..+..+.+..|..-.+.+.+.+.+.+++-.
T Consensus        72 DiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i  114 (142)
T d1o6za1          72 DVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYI  114 (142)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCE
T ss_pred             CEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCce
Confidence            8777776654444446788999999999999999998876544

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.59  E-value=3e-05  Score=60.73  Aligned_cols=102  Identities=11%  Similarity=0.021  Sum_probs=65.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      ++||.|.|+ |++|+.++..|.....   ..+|++++++....          ...........+|.       +.+.++
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~---~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~a   73 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGI---AEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDA   73 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTC---CSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCC---CcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccc
Confidence            479999995 9999999999987322   14899999875210          01112334555664       236788


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      |.|+.+++.......+..+....|+.-.+.+.+.+.+++++-.
T Consensus        74 divvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~ai  116 (146)
T d1ez4a1          74 DLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGI  116 (146)
T ss_dssp             SEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred             cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcE
Confidence            8777776643333335677789999999999999998875443

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.59  E-value=0.00014  Score=65.07  Aligned_cols=103  Identities=10%  Similarity=0.082  Sum_probs=64.3

Q ss_pred             CCEEEEEc--CCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC----------CC------CC---CCCeeEEEe----
Q 016047           25 QSVALIVG--VTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP----------NW------NA---DHLVEYVQC----   79 (396)
Q Consensus        25 ~~~iLVtG--atGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~----------~~------~~---~~~v~~~~~----   79 (396)
                      +|-+||||  ++.-||..++++|.+     +|.+|++..+....          ..      ..   ........+    
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~-----~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSK-----RNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASF   76 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHH-----TTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTC
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHH-----cCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhccccccee
Confidence            46889999  556899999999999     89999988764210          00      00   011122223    


Q ss_pred             ----------------cCCChHHHH-------HHHhcCCCeeEEEEeccCCC--------ccHHHHHHhHHHHHHHHHHH
Q 016047           80 ----------------DVSDPEETQ-------AKLSQLTDVTHIFYVTWTNR--------STEAENCKINGSMFRNVLRA  128 (396)
Q Consensus        80 ----------------Dl~d~~~~~-------~~~~~~~~V~h~a~~~~~~~--------~~~~~~~~~nv~gt~~ll~a  128 (396)
                                      |+.+.+.++       +.+..+|.++|.++......        ++....+++|+.++..++++
T Consensus        77 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~  156 (329)
T d1uh5a_          77 DTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKY  156 (329)
T ss_dssp             SSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             hhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHH
Confidence                            444443332       33445677777766432111        14566789999999988888


Q ss_pred             Hccc
Q 016047          129 VIPN  132 (396)
Q Consensus       129 ~~~~  132 (396)
                      +.+.
T Consensus       157 ~~~~  160 (329)
T d1uh5a_         157 FVNI  160 (329)
T ss_dssp             HGGG
T ss_pred             HHhh
Confidence            8775

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.54  E-value=0.00014  Score=56.43  Aligned_cols=103  Identities=15%  Similarity=0.060  Sum_probs=65.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +||.|+|| |++|+.++..|+.....   .++.++++++...          ...........+|       .+.++++|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~---~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~ad   70 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTA---NELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCD   70 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCS---SEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCC---CEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCc
Confidence            58999996 99999999999874322   2899999876432          1111223333333       23478888


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                      .|+-.|+.......+..+....|+.-.+.+++.+.+++++-..+
T Consensus        71 ivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~i  114 (142)
T d1y6ja1          71 VIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVIL  114 (142)
T ss_dssp             EEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred             eEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEE
Confidence            77766654433344677888999999999999999887655433

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.53  E-value=0.00034  Score=55.09  Aligned_cols=107  Identities=14%  Similarity=0.080  Sum_probs=66.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCC--CcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGG--PWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~--g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      .++||.|+||+|++|++++..|...+....  ......+.-.....          .........+...-    ...+++
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~   78 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATD----DPKVAF   78 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES----CHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCC----chhhhc
Confidence            346999999999999999999987433211  11122222211000          00112233333321    124678


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCC
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  134 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  134 (396)
                      +++|.|+-+++....+..+..+.+..|+.-.+.+.+.+.+..+
T Consensus        79 ~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~  121 (154)
T d1y7ta1          79 KDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK  121 (154)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             ccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            8999888887654444447788899999999999999988644

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.53  E-value=4.7e-05  Score=61.62  Aligned_cols=69  Identities=19%  Similarity=0.197  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--C-CCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--W-NADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      .|+|||.|| |++|+++++.|.+     .||+|++++|+....  . ...........+..+.....+.+...+.++.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~-----~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTD-----SGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVIS   73 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHT-----TTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHh-----CCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEe
Confidence            479999996 9999999999999     899999999986421  0 0113444555666677777777776664443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.00026  Score=55.08  Aligned_cols=104  Identities=13%  Similarity=0.113  Sum_probs=69.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCC-CCCCCCcEEEEEeCCCCCC--------CCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLP-DTPGGPWKVYGVARRPKPN--------WNADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~-~~~~~g~~V~~l~R~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      +||.|+||+|.+|++++..|..+ +   ...++..++..+...        .........+ ..-.+    .+.++++|.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~---~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~~~~----~~~~~~aDv   72 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLP---SGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDA----TPALEGADV   72 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSC---TTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CSSCC----HHHHTTCSE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCC---CCcEEEEecccccchhHHHHHHCCccccCCcEE-EcCCC----ccccCCCCE
Confidence            58999999999999998877531 2   245899898754221        1001111111 11112    246789998


Q ss_pred             eeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           97 VTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        97 V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      |+.+++....+..+..++...|..-.+.+.+.+.+.+++-.
T Consensus        73 vvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~ai  113 (145)
T d2cmda1          73 VLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKAC  113 (145)
T ss_dssp             EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             EEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcE
Confidence            88887754444446778899999999999999999876544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.45  E-value=0.0001  Score=57.83  Aligned_cols=101  Identities=15%  Similarity=0.091  Sum_probs=70.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      ++||.|+|| |++|+.++..|......   -++..+++.+...           .+....+.+...|.       +.+.+
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~d   74 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIA---DEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRD   74 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCC---SEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTT
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCC---ceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhcc
Confidence            479999996 99999999999873222   2799999865321           11223444555553       34778


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCc
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNL  136 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~  136 (396)
                      +|.|+..++..........+....|+.-.+.+.+.+.+++++-
T Consensus        75 aDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a  117 (148)
T d1ldna1          75 ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQG  117 (148)
T ss_dssp             CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCS
T ss_pred             ceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCc
Confidence            8877777664333334567788999999999999998887654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.32  E-value=4.7e-05  Score=58.68  Aligned_cols=68  Identities=16%  Similarity=0.124  Sum_probs=52.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH   99 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h   99 (396)
                      |+++|.| .|.+|+++++.|.+     .|++|++++.++... .........+.+|.++++.+.++ +..++.|+-
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~-----~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~   70 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHR-----MGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIV   70 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHH-----TTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEE
Confidence            5788998 59999999999999     899999999876431 11224567889999999988776 676765443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.29  E-value=0.00044  Score=54.35  Aligned_cols=106  Identities=13%  Similarity=0.071  Sum_probs=68.2

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC------C-----CCCCCeeEEEecCCChHHHHH
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN------W-----NADHLVEYVQCDVSDPEETQA   89 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~------~-----~~~~~v~~~~~Dl~d~~~~~~   89 (396)
                      .++++||.|+|| |.+|+.++..|..     ++. ++++++.++...      .     ...........+     ..++
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~-----~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~-----~~~~   72 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCAL-----RELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEY-----SYEA   72 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHH-----HTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEEC-----SHHH
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHh-----CCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccC-----chhh
Confidence            445689999997 9999999987766     343 788888765321      0     000111111111     2345


Q ss_pred             HHhcCCCeeEEEEeccCCCc-----cHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047           90 KLSQLTDVTHIFYVTWTNRS-----TEAENCKINGSMFRNVLRAVIPNAPNLRH  138 (396)
Q Consensus        90 ~~~~~~~V~h~a~~~~~~~~-----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~  138 (396)
                      +++++|.|+-.++....+..     +..+....|+.-.+.+++.+.+.+++-..
T Consensus        73 ~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiv  126 (154)
T d1pzga1          73 ALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFI  126 (154)
T ss_dssp             HHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             hhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEE
Confidence            67888877777654433221     45677889999999999999988765443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.24  E-value=0.00024  Score=55.20  Aligned_cols=102  Identities=13%  Similarity=0.001  Sum_probs=68.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--------C---CCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--------W---NADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--------~---~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      +||.|+|| |.+|+.++..|......   .++..+++++...        .   ......++...+  +.    +++.++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~---~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~~da   70 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLA---RELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADTANS   70 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC---SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGGTTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCC---ceEEEeccccccchhhhhhhhcccchhcccceEEecC--CH----HHhcCC
Confidence            58999996 99999999999874322   3899999876421        0   001223333222  22    346888


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      |.|+-+++.......+..+....|..-.+.+.+.+.+.+++-.
T Consensus        71 dvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~ai  113 (142)
T d1guza1          71 DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPI  113 (142)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCE
T ss_pred             eEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeE
Confidence            8777776644444446778889999999999999998875543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.23  E-value=0.00043  Score=54.47  Aligned_cols=107  Identities=16%  Similarity=0.047  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCC--cEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGP--WKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g--~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      .++||.|+||+|.+|++++..|.+.......  .+++.++.+....          .........+.+-  +  +..+++
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~--~~~~~~   77 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT--D--KEEIAF   77 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE--S--CHHHHT
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC--c--cccccc
Confidence            3569999999999999999988752111011  1344444332110          0001122222211  1  124667


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCC
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAP  134 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~  134 (396)
                      .++|.|+-+++.......+..+.+..|..-.+.+.+.+.++.+
T Consensus        78 ~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~  120 (154)
T d5mdha1          78 KDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAK  120 (154)
T ss_dssp             TTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSC
T ss_pred             CCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCC
Confidence            8888777766544444446677889999999999999887644

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.19  E-value=0.00011  Score=60.10  Aligned_cols=35  Identities=26%  Similarity=0.235  Sum_probs=32.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |||.|+||+|.+|+.|++.|.+     .||+|++.+|++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~-----~G~~V~l~~R~~e   35 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLAT-----LGHEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHT-----TTCEEEEEESSHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHH-----CCCEEEEEECCHH
Confidence            5899999999999999999999     8999999999753

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.11  E-value=0.00028  Score=54.59  Aligned_cols=103  Identities=20%  Similarity=0.093  Sum_probs=69.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      +||.|+|| |.+|+.++..|+.....   -++..+++++...          ...........+|.       +.++++|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~---~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~ad   69 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFA---REMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSD   69 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCC---SEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCC---CEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCC
Confidence            58999996 99999999888764322   3799998764211          00112334444442       3467888


Q ss_pred             CeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcceE
Q 016047           96 DVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus        96 ~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                      .|+-+++..........+....|..-.+.+.+.+.+.+++-..+
T Consensus        70 ivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivi  113 (140)
T d1a5za1          70 VVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVI  113 (140)
T ss_dssp             EEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             EEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEE
Confidence            77777664433344677788999999999999999887655433

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.10  E-value=0.00057  Score=53.90  Aligned_cols=104  Identities=13%  Similarity=0.032  Sum_probs=70.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      .+++||.|+|+ |.+|+.++..|.......   ++..++++++..           .+.........+|.       +.+
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~---ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~   86 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLAD---ELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVT   86 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCS---EEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGG
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCc---EEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhc
Confidence            34579999995 999999999998833222   799999864211           11111222223332       236


Q ss_pred             hcCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      .++|.|+..|+.......+..+....|+.-.+.++..+.+.+++-.
T Consensus        87 ~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~ai  132 (160)
T d1i0za1          87 ANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCI  132 (160)
T ss_dssp             TTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             ccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence            7888888887755444446778889999999999999998865443

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.00  E-value=0.00078  Score=52.10  Aligned_cols=103  Identities=15%  Similarity=0.081  Sum_probs=68.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN----------WNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      +.||.|+|+ |++|++++..|..+...   -++.++++++...          ........+...+  +.    +.++++
T Consensus         1 p~Ki~IIGa-G~VG~~~a~~l~~~~l~---~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~da   70 (143)
T d1llda1           1 PTKLAVIGA-GAVGSTLAFAAAQRGIA---REIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDA   70 (143)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCC---SEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCC---cEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCC
Confidence            358999996 99999999998874322   2799999765211          0001222333332  11    236778


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      |.|+-.|+.......+..+.+..|..-.+.+.+.+.+.+++-.
T Consensus        71 DvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai  113 (143)
T d1llda1          71 DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAI  113 (143)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             cEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeE
Confidence            8777776644333446778899999999999999998875543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.93  E-value=0.00086  Score=51.81  Aligned_cols=101  Identities=17%  Similarity=0.106  Sum_probs=67.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEE-ecCCChHHHHHHHhc
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQ-CDVSDPEETQAKLSQ   93 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~-~Dl~d~~~~~~~~~~   93 (396)
                      |||.|+|| |.+|+.++..|..+...   -++..+++++...           ........+.. .|.       +.+.+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~---~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~   69 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDV---DEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKG   69 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCC---SEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcC---ceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhcc
Confidence            58999996 99999999988863322   2799998765321           00111223332 232       24778


Q ss_pred             CCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           94 LTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      +|.|+-.|+.......+..+....|..-.+.+.+.+.+.+++-.
T Consensus        70 adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~ai  113 (142)
T d1ojua1          70 SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESK  113 (142)
T ss_dssp             CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCE
T ss_pred             ccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcE
Confidence            88776665544334446788889999999999999998875543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.0006  Score=53.72  Aligned_cols=101  Identities=17%  Similarity=0.071  Sum_probs=65.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      .||.|+|+ |.+|+.++..|...+..   .++..+++++...           ............|.       +.+.++
T Consensus        20 ~KI~IIGa-G~VG~~~A~~l~~~~l~---~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~a   88 (159)
T d2ldxa1          20 CKITVVGV-GDVGMACAISILLKGLA---DELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANS   88 (159)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTSC---SEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCC---CEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccc
Confidence            58999995 99999999999884322   2799999764211           11111222233332       235677


Q ss_pred             CCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           95 TDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      |.|+-.|+.......+..+.++.|+.-.+.+...+.+.+++-.
T Consensus        89 divvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~i  131 (159)
T d2ldxa1          89 KLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCK  131 (159)
T ss_dssp             EEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCE
T ss_pred             cEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeE
Confidence            7776666544434345667788999999999888887765444

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.77  E-value=0.00065  Score=52.58  Aligned_cols=99  Identities=15%  Similarity=0.093  Sum_probs=60.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCCCC-----------CCCCCCeeEE-EecCCChHHHHHHHh
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPKPN-----------WNADHLVEYV-QCDVSDPEETQAKLS   92 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~~~-----------~~~~~~v~~~-~~Dl~d~~~~~~~~~   92 (396)
                      +||.|+|+ |.+|+.++..|..     ++ .++.+++.++...           ........+. ..|.       +.+.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~-----~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~   68 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAA-----KELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTA   68 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----HTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGT
T ss_pred             CeEEEECC-CHHHHHHHHHHHh-----CCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhc
Confidence            69999995 9999999988876     33 2788888765321           0001122232 2332       2356


Q ss_pred             cCCCeeEEEEeccCCCccHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           93 QLTDVTHIFYVTWTNRSTEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        93 ~~~~V~h~a~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      ++|.|+-+|+.......+..+.+..|..-.+.+++.+.+.+++-.
T Consensus        69 ~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~ai  113 (142)
T d1uxja1          69 NSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAV  113 (142)
T ss_dssp             TCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCE
T ss_pred             CCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCce
Confidence            778776666543333335667789999999999999998876544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.0013  Score=54.97  Aligned_cols=72  Identities=15%  Similarity=-0.003  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC----------------CChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChH--
Q 016047           24 YQSVALIVGV----------------TGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPE--   85 (396)
Q Consensus        24 ~~~~iLVtGa----------------tGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~--   85 (396)
                      .+++||||+|                ||..|.+|++++..     +|++|+++.-......  ...+..+...  ..+  
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~-----~Ga~V~li~g~~~~~~--p~~~~~~~~~--t~~~m   75 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAAR-----RGANVTLVSGPVSLPT--PPFVKRVDVM--TALEM   75 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHH-----TTCEEEEEECSCCCCC--CTTEEEEECC--SHHHH
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHH-----cCCchhhhhcccccCc--ccccccceeh--hhHHH
Confidence            4567777764                79999999999999     8999999886544322  2456655443  333  


Q ss_pred             --HHHHHHhcCCCeeEEEEec
Q 016047           86 --ETQAKLSQLTDVTHIFYVT  104 (396)
Q Consensus        86 --~~~~~~~~~~~V~h~a~~~  104 (396)
                        .+.+.+..+|.++++|+.+
T Consensus        76 ~~~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          76 EAAVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             HHHHHHHGGGCSEEEECCBCC
T ss_pred             HHHHHhhhccceeEeeeechh
Confidence              3445567788888887753

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.68  E-value=0.00076  Score=52.38  Aligned_cols=102  Identities=17%  Similarity=0.014  Sum_probs=64.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      |||.|+| +|++|+.++..|+....   ..++..++++....           ...........+|.       +.++++
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~---~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~a   70 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGV---ADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADA   70 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTC---CSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTC
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCC---CceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccc
Confidence            7999999 59999999998886321   13788888764321           01112233444442       336788


Q ss_pred             CCeeEEEEeccCCCc----cHHHHHHhHHHHHHHHHHHHcccCCCcce
Q 016047           95 TDVTHIFYVTWTNRS----TEAENCKINGSMFRNVLRAVIPNAPNLRH  138 (396)
Q Consensus        95 ~~V~h~a~~~~~~~~----~~~~~~~~nv~gt~~ll~a~~~~~~~~~~  138 (396)
                      |.|+-.|+.......    +..+....|+.-.+.+.+.+.+.+++-..
T Consensus        71 diVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiv  118 (146)
T d1hyha1          71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVL  118 (146)
T ss_dssp             SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEE
T ss_pred             cEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEE
Confidence            877776664332221    33456788999999999999888765443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.40  E-value=0.0012  Score=51.57  Aligned_cols=35  Identities=23%  Similarity=0.254  Sum_probs=32.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ++|.|.||.|.+|+.+++.|.+     .||+|++.+|+..
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~-----~G~~V~~~d~~~~   44 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRA-----SGYPISILDREDW   44 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHT-----TTCCEEEECTTCG
T ss_pred             CeEEEEcCCCHHHHHHHHHHHH-----cCCCcEecccccc
Confidence            6999999999999999999999     8999999998753

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.34  E-value=0.0013  Score=51.98  Aligned_cols=35  Identities=26%  Similarity=0.352  Sum_probs=31.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      |||+|.|+ |.+|+.++..|.+     .||+|++++|.+..
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~-----~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCK-----QGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHH-----CCCceEEEEcCHHH
Confidence            58999996 9999999999998     89999999998653

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.28  E-value=0.0076  Score=44.05  Aligned_cols=62  Identities=13%  Similarity=0.065  Sum_probs=48.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQL   94 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~   94 (396)
                      .||.|.| +|.+|+-++....+     -|++|++++..+..... .-.-+++.+|+.|.+.+.+....+
T Consensus        12 ~kigIlG-gGQL~rMla~aA~~-----lG~~v~v~d~~~~~PA~-~va~~~i~~~~~d~~~l~~~~~~~   73 (111)
T d1kjqa2          12 TRVMLLG-SGELGKEVAIECQR-----LGVEVIAVDRYADAPAM-HVAHRSHVINMLDGDALRRVVELE   73 (111)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHT-----TTCEEEEEESSTTCGGG-GGSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEEe-CCHHHHHHHHHHHH-----CCCEEEEEcCCCCCchh-hcCCeEEECCCCCHHHHHHHHHhh
Confidence            5899999 89999999999998     89999999987653210 001258889999999998877544

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.27  E-value=0.00091  Score=45.54  Aligned_cols=37  Identities=22%  Similarity=0.337  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .+.+|||+||+|-+|...+..+..     .|++|++++++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~-----~G~~Vi~~t~s~~   67 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHK-----LGYQVVAVSGRES   67 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESCGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHH-----cCCeEEEEECCHH
Confidence            356899999999999999998777     7999999998754

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.22  E-value=0.0011  Score=53.49  Aligned_cols=34  Identities=21%  Similarity=0.216  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +|||.|.| +|.+|..++..|.+     .||+|++++|++
T Consensus         1 sk~iaIiG-aG~~G~~~A~~l~~-----~G~~V~~~~r~~   34 (184)
T d1bg6a2           1 SKTYAVLG-LGNGGHAFAAYLAL-----KGQSVLAWDIDA   34 (184)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHH-----CCCEEEEEECCH
Confidence            47999999 59999999999999     899999999975

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.82  E-value=0.0031  Score=48.74  Aligned_cols=38  Identities=13%  Similarity=0.095  Sum_probs=27.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |+|.|.||||++|+.+++.|++.+.. .-.+++++.++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~-p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDF-DAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGG-GGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCC-CeeEEEEeeccc
Confidence            58999999999999999988753111 012577777543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.82  E-value=0.0074  Score=46.73  Aligned_cols=102  Identities=14%  Similarity=0.081  Sum_probs=65.0

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      +.||.|+|+ |.+|+.++..|.... .   .++.++++.+...           ........+...+  +    .+.+.+
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~-l---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~   71 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKN-L---GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAG   71 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-C---CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCC-C---CeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCC
Confidence            358999995 999999998776632 1   2788888865321           0001122333322  1    234677


Q ss_pred             CCCeeEEEEeccCCCc-----cHHHHHHhHHHHHHHHHHHHcccCCCcc
Q 016047           94 LTDVTHIFYVTWTNRS-----TEAENCKINGSMFRNVLRAVIPNAPNLR  137 (396)
Q Consensus        94 ~~~V~h~a~~~~~~~~-----~~~~~~~~nv~gt~~ll~a~~~~~~~~~  137 (396)
                      +|.|+-+++.......     +..+.+..|..-.+.+++.+.+.+++-.
T Consensus        72 advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~ai  120 (150)
T d1t2da1          72 ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAF  120 (150)
T ss_dssp             CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             CcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence            8877776654332211     3567789999999999999998876543

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=95.82  E-value=0.0046  Score=47.68  Aligned_cols=36  Identities=17%  Similarity=0.073  Sum_probs=25.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      |||.|.||||++|..|++.|++.+.. ...++..++.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~-p~~~i~~~ss   36 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDF-DLIEPVFFST   36 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGG-GGSEEEEEES
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCC-CceEEEEecc
Confidence            58999999999999999988752110 1125665553

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.49  E-value=0.0036  Score=48.78  Aligned_cols=69  Identities=10%  Similarity=0.121  Sum_probs=51.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-----CCCCCCeeEEEecCCChHHHHHH-HhcCCCeeE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-----WNADHLVEYVQCDVSDPEETQAK-LSQLTDVTH   99 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~h   99 (396)
                      -+|+|.| .|-+|..+++.|.+     .|++|++++.++...     .....++.++.||.+|++.++++ +..++.|+-
T Consensus         4 nHiII~G-~g~~g~~l~~~L~~-----~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           4 DHFIVCG-HSILAINTILQLNQ-----RGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----cCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEE
Confidence            3799999 58999999999998     789999999876321     01125789999999999988653 344554443


Q ss_pred             E
Q 016047          100 I  100 (396)
Q Consensus       100 ~  100 (396)
                      +
T Consensus        78 ~   78 (153)
T d1id1a_          78 L   78 (153)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.28  E-value=0.0058  Score=48.13  Aligned_cols=34  Identities=32%  Similarity=0.393  Sum_probs=30.5

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |||.|.| .|.+|+.+++.|.+     .||+|++.+|++.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~-----~g~~V~~~d~~~~   34 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRR-----RGHYLIGVSRQQS   34 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHH-----CCCEEEEEECCch
Confidence            5799998 69999999999998     8999999999753

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.24  E-value=0.0069  Score=44.70  Aligned_cols=38  Identities=16%  Similarity=0.115  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ...+++++|.| .|++|..++..|.+     .|.+|+++.|.+.
T Consensus        19 ~~~p~~v~IiG-gG~ig~E~A~~l~~-----~G~~Vtlve~~~~   56 (117)
T d1ebda2          19 GEVPKSLVVIG-GGYIGIELGTAYAN-----FGTKVTILEGAGE   56 (117)
T ss_dssp             SSCCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSSS
T ss_pred             hhcCCeEEEEC-CCccceeeeeeecc-----cccEEEEEEecce
Confidence            34568999999 89999999999998     8999999998753

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.23  E-value=0.009  Score=44.86  Aligned_cols=30  Identities=17%  Similarity=0.189  Sum_probs=25.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV   60 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l   60 (396)
                      +||.|.|++|-.|+.+.+.+.+     +++++.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~-----~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSE-----KGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHH-----TTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhc-----CCCeEEEE
Confidence            5899999999999999988877     78886544

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.03  E-value=0.016  Score=46.39  Aligned_cols=34  Identities=12%  Similarity=0.306  Sum_probs=27.5

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   61 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~   61 (396)
                      ++.||.|.||||++|..|++.|.+.|    ..++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP----~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHP----QFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCS----SEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCC----CceEEEEe
Confidence            34689999999999999999999853    45666554

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.97  E-value=0.0076  Score=48.24  Aligned_cols=32  Identities=22%  Similarity=0.324  Sum_probs=26.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   61 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~   61 (396)
                      ++|.|.|||||+|..|++.|.+.|    .++|..+.
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP----~~ei~~l~   33 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHP----HMTITALT   33 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCT----TEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCC----CCceEeeE
Confidence            689999999999999999998843    45665554

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.96  E-value=0.0096  Score=44.32  Aligned_cols=37  Identities=24%  Similarity=0.296  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ..+++++|.| +|+||..++..|.+     .|.+|+.+.|.+.
T Consensus        21 ~~p~~~vIiG-~G~ig~E~A~~l~~-----lG~~Vtii~~~~~   57 (122)
T d1v59a2          21 EIPKRLTIIG-GGIIGLEMGSVYSR-----LGSKVTVVEFQPQ   57 (122)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred             cCCCeEEEEC-CCchHHHHHHHHHh-----hCcceeEEEeccc
Confidence            4568999999 89999999999998     8999999998753

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=94.81  E-value=0.0027  Score=50.60  Aligned_cols=73  Identities=15%  Similarity=0.110  Sum_probs=46.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC-CCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .+.+.+|||+||+|-+|...+..+..     .|.+|+++++++..... ..-+.+. ..|..+.........++|.|+.+
T Consensus        25 ~~~g~~VlI~ga~G~vG~~aiqlak~-----~G~~vi~~~~~~~~~~~~~~lGa~~-~i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          25 ARPGEKVLVQAAAGALGTAAVQVARA-----MGLRVLAAASRPEKLALPLALGAEE-AATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHH-----TTCEEEEEESSGGGSHHHHHTTCSE-EEEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCCCCEEEEEeccccchhhhhhhhcc-----cccccccccccccccccccccccce-eeehhhhhhhhhccccccccccc
Confidence            34567999999999999999988877     79999999987643200 0012222 23444433333334556666664

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.81  E-value=0.011  Score=46.90  Aligned_cols=33  Identities=27%  Similarity=0.255  Sum_probs=26.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      ++|.|.||||++|..|++.|.+.|    ..+|..+.-
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP----~~ei~~l~s   34 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHP----EAKITYLSS   34 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCT----TEEEEEEEC
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCC----CceEEEeec
Confidence            589999999999999999998753    356666653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.59  E-value=0.012  Score=45.31  Aligned_cols=34  Identities=21%  Similarity=0.336  Sum_probs=28.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      |+|.|.|+||.||...++-+.+.+   ..++|.+++=
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~---d~f~v~~Lsa   35 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNP---EHFRVVALVA   35 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCT---TTEEEEEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCC---CCcEEEEEEe
Confidence            689999999999999999887643   4688888874

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.43  E-value=0.0097  Score=45.91  Aligned_cols=35  Identities=17%  Similarity=0.367  Sum_probs=29.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      +|+|.|.|+||.||...++-+.+.+   ..++|.+++=
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~---d~f~v~~lsa   36 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNL---DRYQVIALTA   36 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTG---GGEEEEEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCC---CCcEEEEEEe
Confidence            3899999999999999999987643   4678888874

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.31  E-value=0.023  Score=41.91  Aligned_cols=36  Identities=14%  Similarity=0.155  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..+++++|.| +|+||..++..|.+     .|.+|+++.|..
T Consensus        20 ~~p~~i~IiG-~G~ig~E~A~~l~~-----~G~~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIG-AGVIGLELGSVWAR-----LGAEVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSS
T ss_pred             cCCCeEEEEC-CChHHHHHHHHHHH-----cCCceEEEEeec
Confidence            4568999999 89999999999998     899999999874

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.28  E-value=0.024  Score=41.69  Aligned_cols=34  Identities=24%  Similarity=0.236  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +++|+|.| .|++|..++..|.+     .|.+|+.+.|.+
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~-----~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKR-----LGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEECSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHh-----ccccceeeehhc
Confidence            57999999 89999999999998     799999999874

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.24  E-value=0.022  Score=41.77  Aligned_cols=35  Identities=17%  Similarity=0.097  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+++|+|.| .|++|..++..|.+     .|.+|+.+.|.+
T Consensus        20 ~p~~vvIiG-gG~ig~E~A~~l~~-----~G~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVG-AGYIGVELGGVING-----LGAKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CCCEEEEEC-CChhhHHHHHHhhc-----cccEEEEEeecc
Confidence            458999999 89999999999998     799999999875

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.21  E-value=0.0071  Score=48.46  Aligned_cols=68  Identities=18%  Similarity=0.089  Sum_probs=45.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---------CCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---------WNADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---------~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      |+|.|.| +|-.|+.++..|.+     .|++|+...|..+..         ............++.-.+++.++++++|.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~-----~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~   74 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVD-----NGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV   74 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHH-----HCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccch
Confidence            5899999 79999999999998     799999998843210         00001111112233335667888999985


Q ss_pred             eeE
Q 016047           97 VTH   99 (396)
Q Consensus        97 V~h   99 (396)
                      |+-
T Consensus        75 Ii~   77 (180)
T d1txga2          75 VLL   77 (180)
T ss_dssp             EEE
T ss_pred             hhc
Confidence            544

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.21  E-value=0.017  Score=42.32  Aligned_cols=37  Identities=22%  Similarity=0.203  Sum_probs=32.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ...+++++|.| .|++|..++..|.+     .|++|+++.|.+
T Consensus        18 ~~~p~~vvIiG-gG~~G~E~A~~l~~-----~g~~Vtlve~~~   54 (115)
T d1lvla2          18 KALPQHLVVVG-GGYIGLELGIAYRK-----LGAQVSVVEARE   54 (115)
T ss_dssp             SSCCSEEEEEC-CSHHHHHHHHHHHH-----HTCEEEEECSSS
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHhh-----cccceEEEeeec
Confidence            34568999999 89999999999998     899999998864

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.18  E-value=0.02  Score=45.67  Aligned_cols=58  Identities=19%  Similarity=0.208  Sum_probs=43.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCee
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVT   98 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~   98 (396)
                      ..+++|.|.| .|-||+.+++.|..     -|.+|++.+|.+.....            ...+++++++..+|.|+
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~-----~g~~v~~~d~~~~~~~~------------~~~~~l~ell~~sDiv~   97 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAA-----LGAQVRGFSRTPKEGPW------------RFTNSLEEALREARAAV   97 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHH-----TTCEEEEECSSCCCSSS------------CCBSCSHHHHTTCSEEE
T ss_pred             ccCceEEEec-cccccccceeeeec-----cccccccccccccccce------------eeeechhhhhhccchhh
Confidence            4578999999 89999999999988     79999999987543210            01124677889998633

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.13  E-value=0.011  Score=44.44  Aligned_cols=65  Identities=12%  Similarity=0.017  Sum_probs=45.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHH-HhcCCCee
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAK-LSQLTDVT   98 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~~~V~   98 (396)
                      |+|+|.| -|-+|..+++.|.+       ++|.+++..+... .....++.++.||.++++.++++ +..++.++
T Consensus         1 kHivI~G-~g~~g~~l~~~L~~-------~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi   67 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELRG-------SEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVI   67 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSCG-------GGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHcC-------CCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEE
Confidence            5799999 68889999999854       4677788765421 11225788999999999888662 34444333

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.05  E-value=0.01  Score=45.66  Aligned_cols=36  Identities=28%  Similarity=0.301  Sum_probs=26.1

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      +++|.|.||||++|..|++.|.+...  ...++..+..
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~h--P~~~l~~~~s   37 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDF--PLHRLHLLAS   37 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTC--CCSCEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCC--CceEEEEEee
Confidence            36899999999999999999964211  1235666654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.03  E-value=0.023  Score=42.02  Aligned_cols=35  Identities=37%  Similarity=0.445  Sum_probs=31.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .++|+|.| .|++|..++..|.+     .|.+|+.+.|.+.
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~-----~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATART-----AGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSSS
T ss_pred             CCeEEEEC-cchhHHHHHHHhhc-----ccceEEEEeeccc
Confidence            47999999 89999999999998     8999999998753

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.99  E-value=0.016  Score=47.20  Aligned_cols=33  Identities=30%  Similarity=0.288  Sum_probs=29.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |||.|.| .||+|..++..|.+     .||+|++++.++
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~-----~g~~V~g~D~n~   33 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSA-----RGHEVIGVDVSS   33 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHh-----CCCcEEEEeCCH
Confidence            5899997 99999999999998     899999999763

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.92  E-value=0.022  Score=44.15  Aligned_cols=22  Identities=32%  Similarity=0.563  Sum_probs=20.4

Q ss_pred             EEEEEcCCChhHHHHHHHcCCC
Q 016047           27 VALIVGVTGIVGNSLAEILPLP   48 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~   48 (396)
                      +|.|.||||++|..|++.|.+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~H   24 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEES   24 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTC
T ss_pred             EEEEECCCcHHHHHHHHHHHcC
Confidence            7999999999999999999873

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.83  E-value=0.022  Score=42.29  Aligned_cols=35  Identities=23%  Similarity=0.138  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      .++++++|.| .|+||..++..|.+     .|.+|+++.|+
T Consensus        18 ~~P~~vvIIG-gG~iG~E~A~~l~~-----lG~~Vtii~~~   52 (122)
T d1h6va2          18 YCPGKTLVVG-ASYVALECAGFLAG-----IGLDVTVMVRS   52 (122)
T ss_dssp             SCCCSEEEEC-CSHHHHHHHHHHHH-----TTCCEEEEESS
T ss_pred             cCCCeEEEEC-CCccHHHHHHHHhh-----cCCeEEEEEec
Confidence            3557899999 89999999999999     79999999875

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.73  E-value=0.023  Score=44.66  Aligned_cols=33  Identities=39%  Similarity=0.671  Sum_probs=28.4

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCc--EEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPW--KVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~--~V~~l~R~~   64 (396)
                      |+|+|.| .|.+|..+++.|.+     .|+  +|++.+|++
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~-----~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRR-----SGFKGKIYGYDINP   36 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHH-----TTCCSEEEEECSCH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHh-----cCCCeEEEEEECCh
Confidence            5799998 79999999999987     564  799998875

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.64  E-value=0.064  Score=42.54  Aligned_cols=39  Identities=15%  Similarity=0.087  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      +...+|+|+|.| +|..|-.-+..|.+     +||+|+++.+.+.
T Consensus        39 ~~~~~k~V~IIG-aGPAGL~AA~~la~-----~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVG-AGPAGLAFAINAAA-----RGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEEESSSS
T ss_pred             CCCCCcEEEEEC-ccHHHHHHHHHHHh-----hccceEEEeccCc
Confidence            444568999999 89999999999998     8999999998753

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.49  E-value=0.038  Score=40.88  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..++|+|.| .|++|..++..|.+     .|.+|+.+.|.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~-----~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAK-----AGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhc-----cceEEEEEEecC
Confidence            347999998 89999999999998     899999998864

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.48  E-value=0.0099  Score=48.30  Aligned_cols=59  Identities=19%  Similarity=0.088  Sum_probs=42.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      -.+++|.|.| .|.||+.+++.|..     -|.+|++.++......         ..+....+++.+.++.+|.
T Consensus        41 l~gk~vgIiG-~G~IG~~va~~l~~-----fg~~V~~~d~~~~~~~---------~~~~~~~~~l~~~l~~sDi   99 (197)
T d1j4aa1          41 VRDQVVGVVG-TGHIGQVFMQIMEG-----FGAKVITYDIFRNPEL---------EKKGYYVDSLDDLYKQADV   99 (197)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCHHH---------HHTTCBCSCHHHHHHHCSE
T ss_pred             ccCCeEEEec-ccccchhHHHhHhh-----hcccccccCccccccc---------ccceeeecccccccccccc
Confidence            3468999999 99999999999987     7999999987543210         0011122346777888886

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.38  E-value=0.026  Score=44.09  Aligned_cols=34  Identities=15%  Similarity=0.140  Sum_probs=31.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ++|.|.| .|.+|+.+++.|++     .||+|++.+|++.
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~-----~g~~v~~~d~~~~   35 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLK-----AGYLLNVFDLVQS   35 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEECSSHH
T ss_pred             CEEEEEE-EHHHHHHHHHHHHH-----CCCeEEEEECchh
Confidence            5799998 99999999999999     8999999998754

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.037  Score=44.13  Aligned_cols=72  Identities=13%  Similarity=0.066  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCCC---------CCCCCeeEEEecCCChHHHHHHHh
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPNW---------NADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ..+++|||.| +|-.|+.++..|.+     .|. +|+++.|++....         ...-.......|+.+.+.+...+.
T Consensus        16 l~~k~vlIlG-aGGaarai~~al~~-----~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (182)
T d1vi2a1          16 IKGKTMVLLG-AGGASTAIGAQGAI-----EGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA   89 (182)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHH-----TTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHhh-----cCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc
Confidence            3558999999 58889999999998     454 6888898764310         001123356788888888888888


Q ss_pred             cCCCeeEE
Q 016047           93 QLTDVTHI  100 (396)
Q Consensus        93 ~~~~V~h~  100 (396)
                      .+|.|+++
T Consensus        90 ~~diiIN~   97 (182)
T d1vi2a1          90 SADILTNG   97 (182)
T ss_dssp             TCSEEEEC
T ss_pred             ccceeccc
Confidence            88888876

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.039  Score=40.93  Aligned_cols=34  Identities=26%  Similarity=0.274  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +++++|.| .|++|..++..|.+     .|.+|+++.|.+
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~-----~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSA-----LGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhc-----CCcEEEEEeecc
Confidence            48999999 89999999999998     899999999975

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.23  E-value=0.042  Score=43.32  Aligned_cols=39  Identities=23%  Similarity=0.240  Sum_probs=33.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .+.+.+|||+||+|-+|...+..+..     .|.+|+++++++.
T Consensus        26 ~~~g~~VlV~Ga~G~vG~~aiq~a~~-----~G~~vi~~~~~~~   64 (174)
T d1yb5a2          26 VKAGESVLVHGASGGVGLAACQIARA-----YGLKILGTAGTEE   64 (174)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCCEEEEEeccccccccccccccc-----cCccccccccccc
Confidence            34567999999999999999988877     7999999998653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.06  E-value=0.031  Score=44.89  Aligned_cols=33  Identities=24%  Similarity=0.288  Sum_probs=30.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +||.|.| +|..|++++..|.+     .||+|++.+|++
T Consensus         8 ~KI~ViG-aG~wGtAlA~~La~-----~g~~V~l~~r~~   40 (189)
T d1n1ea2           8 NKAVVFG-SGAFGTALAMVLSK-----KCREVCVWHMNE   40 (189)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHT-----TEEEEEEECSCH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHH-----cCCeEEEEEecH
Confidence            5799999 89999999999998     799999999874

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.037  Score=38.69  Aligned_cols=66  Identities=15%  Similarity=0.084  Sum_probs=44.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--CCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--ADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      -.+|+|+|.|. |-.|..+++.|.+     .|++|++.+.+......  ....+.+..+.. +.    ..+.++|.|+.
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~-----~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~d~vi~   70 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLA-----RGVTPRVMDTRMTPPGLDKLPEAVERHTGSL-ND----EWLMAADLIVA   70 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHH-----TTCCCEEEESSSSCTTGGGSCTTSCEEESBC-CH----HHHHHCSEEEE
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHH-----CCCEEEEeeCCcCchhHHHHhhccceeeccc-ch----hhhccCCEEEE
Confidence            45689999995 8899999999999     89999999986543211  123444555543 22    23456665444

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.97  E-value=0.03  Score=45.09  Aligned_cols=35  Identities=17%  Similarity=0.282  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      =++|.|.|| |.+|+.++..++.     .||+|+++++++.
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~-----~G~~V~l~D~~~~   38 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAA-----TGHTVVLVDQTED   38 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEECSCHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHh-----CCCcEEEEECChH
Confidence            479999995 9999999999998     8999999998753

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=92.97  E-value=0.0037  Score=49.14  Aligned_cols=68  Identities=21%  Similarity=0.118  Sum_probs=46.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCCCC--CCCCCCeeEEEecCCChHHHHHHHhcCCCeeE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPKPN--WNADHLVEYVQCDVSDPEETQAKLSQLTDVTH   99 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h   99 (396)
                      ..+++|||.|+ |-+|..+++.|.+     .|. +|++..|.....  +...-+.+     ..+-+++.+.+..+|.|+.
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~-----~g~~~i~v~nRt~~ka~~l~~~~~~~-----~~~~~~~~~~l~~~Divi~   90 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVD-----RGVRAVLVANRTYERAVELARDLGGE-----AVRFDELVDHLARSDVVVS   90 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHH-----HCCSEEEEECSSHHHHHHHHHHHTCE-----ECCGGGHHHHHHTCSEEEE
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHh-----cCCcEEEEEcCcHHHHHHHHHhhhcc-----cccchhHHHHhccCCEEEE
Confidence            34589999996 9999999999998     676 588888864321  00000112     2233567778899998777


Q ss_pred             EE
Q 016047          100 IF  101 (396)
Q Consensus       100 ~a  101 (396)
                      +.
T Consensus        91 at   92 (159)
T d1gpja2          91 AT   92 (159)
T ss_dssp             CC
T ss_pred             ec
Confidence            63

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.96  E-value=0.024  Score=42.04  Aligned_cols=38  Identities=13%  Similarity=0.156  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ...+++++|.| .|+||-.++..|.+     .|.+|+.+.|.+.
T Consensus        22 ~~~p~~~viiG-~G~iglE~A~~~~~-----~G~~Vtvi~~~~~   59 (123)
T d1dxla2          22 SEIPKKLVVIG-AGYIGLEMGSVWGR-----IGSEVTVVEFASE   59 (123)
T ss_dssp             SSCCSEEEESC-CSHHHHHHHHHHHH-----HTCEEEEECSSSS
T ss_pred             cccCCeEEEEc-cchHHHHHHHHHHh-----cCCeEEEEEEccc
Confidence            34568999999 89999999999998     8999999998754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.94  E-value=0.044  Score=41.18  Aligned_cols=36  Identities=14%  Similarity=0.191  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ..++|+|.| +|++|..++..|.+     .|.+|+.+.+.+.
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~-----~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIK-----ANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHh-----hCcceeeeeeccc
Confidence            358999999 89999999999998     7999999998753

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.88  E-value=0.043  Score=43.99  Aligned_cols=58  Identities=17%  Similarity=0.036  Sum_probs=42.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      ..+++|.|.| .|.||+.+++.|..     -|.+|+..++.......   .  ....     ++++++++.+|.
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~-----fg~~v~~~d~~~~~~~~---~--~~~~-----~~l~ell~~sDi   99 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAES-----LGMYVYFYDIENKLPLG---N--ATQV-----QHLSDLLNMSDV   99 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCCCCT---T--CEEC-----SCHHHHHHHCSE
T ss_pred             ccceEEEEee-cccchhhhhhhccc-----ccceEeeccccccchhh---h--hhhh-----hhHHHHHhhccc
Confidence            4568999998 99999999999987     78999999986543211   1  1111     246677888886

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.81  E-value=0.057  Score=41.52  Aligned_cols=34  Identities=15%  Similarity=0.159  Sum_probs=30.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |||.+.| +|.+|+++++.|++     .|++|++.+|++.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~-----~~~~i~v~~r~~~   34 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQ-----TPHELIISGSSLE   34 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTT-----SSCEEEEECSSHH
T ss_pred             CEEEEEe-ccHHHHHHHHHHHh-----CCCeEEEEcChHH
Confidence            5799998 99999999999998     7899999988753

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.80  E-value=0.038  Score=40.79  Aligned_cols=33  Identities=30%  Similarity=0.424  Sum_probs=30.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ++++|.| .|++|..++..|.+     .|++|+.+.|.+
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~-----~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAE-----AGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CcEEEEC-CcHHHHHHHHHhhc-----ccceEEEEeccc
Confidence            7899999 89999999999998     899999998864

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.79  E-value=0.028  Score=43.85  Aligned_cols=62  Identities=18%  Similarity=0.167  Sum_probs=42.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCC-CCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNW-NADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      |||-|.| .|.+|+.+++.|++     .||+|++.+|++.... ....+...    ..   +..++++++|.|+-+
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~-----~G~~V~~~d~~~~~~~~~~~~~~~~----~~---~~~e~~~~~d~ii~~   63 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLK-----AGYSLVVSDRNPEAIADVIAAGAET----AS---TAKAIAEQCDVIITM   63 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHH-----TTCEEEEECSCHHHHHHHHHTTCEE----CS---SHHHHHHHCSEEEEC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHH-----CCCeEEEEeCCcchhHHHHHhhhhh----cc---cHHHHHhCCCeEEEE
Confidence            5799999 89999999999999     8999999999764310 00011111    11   235667788865554

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.65  E-value=0.027  Score=42.47  Aligned_cols=31  Identities=13%  Similarity=0.227  Sum_probs=25.2

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEe
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVA   61 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~   61 (396)
                      ||.|.|++|-.|+.+++.+.+.    .++++.+..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~----~~~~l~~~~   31 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAA----DDLTLSAEL   31 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHS----TTSEEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhC----CCCEEEEEE
Confidence            6999999999999999998764    567765443

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.58  E-value=0.049  Score=39.57  Aligned_cols=54  Identities=22%  Similarity=0.268  Sum_probs=40.7

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC---CCCCCCeeEEEecCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN---WNADHLVEYVQCDVSD   83 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~---~~~~~~v~~~~~Dl~d   83 (396)
                      .+|+|||.| .|.+|..-++.|++     .|.+|+.++......   +....+++++..++.+
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~-----~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~   67 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLE-----AGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE   67 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHH-----TTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-----CCCeEEEEeccCChHHHHHHhcCCceeeccCCCH
Confidence            368999999 89999999999999     799999998765432   1123467777766544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=92.40  E-value=0.03  Score=43.99  Aligned_cols=36  Identities=22%  Similarity=0.311  Sum_probs=31.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      .+|||+||+|-+|...+.....     .|.+|+++++++.+
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~-----~Ga~Viat~~s~~k   60 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNK-----RGYDVVASTGNREA   60 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHH-----HTCCEEEEESSSST
T ss_pred             CEEEEeCCcchHHHHHHHHHHH-----cCCceEEEecCHHH
Confidence            4699999999999999877766     78999999997654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=92.37  E-value=0.046  Score=43.42  Aligned_cols=39  Identities=26%  Similarity=0.316  Sum_probs=33.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .+.+.+|||+||+|-+|...+.....     .|.+|+++++++.
T Consensus        27 v~~G~~VlV~ga~ggvG~~aiqlak~-----~Ga~vi~~~~~~~   65 (182)
T d1v3va2          27 VKGGETVLVSAAAGAVGSVVGQIAKL-----KGCKVVGAAGSDE   65 (182)
T ss_dssp             CCSSCEEEESSTTSHHHHHHHHHHHH-----TTCEEEEEESSHH
T ss_pred             CCCCCEEEEEeCCCchhHHHHHHHHc-----cCCEEEEeCCCHH
Confidence            34568999999999999999988887     7999999998754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.35  E-value=0.049  Score=40.43  Aligned_cols=36  Identities=19%  Similarity=0.227  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..+++++|.| .|+||..++..|.+     .|.+|+.+.|.+
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~-----~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYST-----LGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHH-----HTCEEEEECSSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhc-----CCCEEEEEEeec
Confidence            3458999999 89999999999998     799999999875

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.34  E-value=0.041  Score=44.55  Aligned_cols=57  Identities=18%  Similarity=0.100  Sum_probs=42.2

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD   96 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~   96 (396)
                      .+++|.|.| .|.||+.+++.|..     -|.+|++.++.......  ..+.+        .++++.++.+|.
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~-----fg~~v~~~d~~~~~~~~--~~~~~--------~~l~~l~~~~D~  100 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKG-----FGAKVIAYDPYPMKGDH--PDFDY--------VSLEDLFKQSDV  100 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSCCSSCC--TTCEE--------CCHHHHHHHCSE
T ss_pred             cceeeeeee-cccccccccccccc-----cceeeeccCCccchhhh--cchhH--------HHHHHHHHhccc
Confidence            458999999 99999999999987     79999999986543211  12221        235677888886

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.15  E-value=0.046  Score=42.03  Aligned_cols=34  Identities=21%  Similarity=0.090  Sum_probs=30.1

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |||.|.| .|.+|+.+++.|++     .||+|+..+|.+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~-----~g~~v~~~~~~~~   34 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRS-----RGVEVVTSLEGRS   34 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHH-----TTCEEEECCTTCC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHH-----CCCeEEEEcCchh
Confidence            5799998 89999999999999     8999998887654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.14  E-value=0.065  Score=44.52  Aligned_cols=34  Identities=32%  Similarity=0.417  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .++|+|.| +|..|...+..|.+     +|++|+++.|..
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~-----~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILAR-----KGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHH-----CCCCEEEEeCCC
Confidence            46899999 89999999999999     899999999865

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.11  E-value=0.036  Score=43.94  Aligned_cols=34  Identities=26%  Similarity=0.258  Sum_probs=30.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |||-|.| .|.+|..+++.|++     .||+|++.+|.+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~-----~G~~V~~~dr~~~   35 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAE-----KGFKVAVFNRTYS   35 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHH-----CCCeEEEEECCHH
Confidence            5799999 99999999999999     8999999999753

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.90  E-value=0.041  Score=43.61  Aligned_cols=37  Identities=22%  Similarity=0.314  Sum_probs=32.4

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      +.+|||+||+|-+|+..+..+..     .|.+|++.++++.+
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~-----~Ga~Viat~~s~~k   68 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAK-----RGYTVEASTGKAAE   68 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESCTTC
T ss_pred             CCEEEEEeccchHHHHHHHHHHH-----cCCceEEecCchHH
Confidence            46899999999999999988877     79999999987654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=91.77  E-value=0.04  Score=43.70  Aligned_cols=36  Identities=22%  Similarity=0.354  Sum_probs=31.7

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      .+|||+||+|-+|...+.....     .|.+|++++|++.+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~-----~Ga~Via~~~~~~k   68 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHK-----LGYQVVAVSGREST   68 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHH-----TTCCEEEEESCGGG
T ss_pred             CcEEEEEccccchHHHHHHHHH-----cCCCeEEEecchhH
Confidence            4899999999999999888877     79999999997654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.68  E-value=0.022  Score=45.98  Aligned_cols=65  Identities=15%  Similarity=0.000  Sum_probs=44.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      -.+++|.|.| .|.||+.+++.|..     -|.+|++.++.......  ..     ..+....+++++++.+|. ++|+
T Consensus        47 L~gktvgIiG-~G~IG~~va~~l~~-----fg~~v~~~d~~~~~~~~--~~-----~~~~~~~~l~~ll~~sD~i~~~~  112 (193)
T d1mx3a1          47 IRGETLGIIG-LGRVGQAVALRAKA-----FGFNVLFYDPYLSDGVE--RA-----LGLQRVSTLQDLLFHSDCVTLHC  112 (193)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEECTTSCTTHH--HH-----HTCEECSSHHHHHHHCSEEEECC
T ss_pred             eeCceEEEec-cccccccceeeeec-----cccceeeccCcccccch--hh-----hccccccchhhccccCCEEEEee
Confidence            4568999999 99999999999988     89999999986543210  00     011112346677888886 4444

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.52  E-value=0.091  Score=45.67  Aligned_cols=34  Identities=26%  Similarity=0.341  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +|+|+|.| +|+-|...+..|.+     .|++|+++.+++
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k-----~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAE-----KGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHh-----CCCCEEEEECCC
Confidence            58999999 99999999999998     899999999875

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.38  E-value=0.1  Score=38.09  Aligned_cols=34  Identities=12%  Similarity=0.100  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +++|+|.| +|++|..++..|.+     .|.+|+.+.|.+
T Consensus        22 ~~~vvVvG-gG~ig~E~A~~l~~-----~g~~vt~i~~~~   55 (121)
T d1mo9a2          22 GSTVVVVG-GSKTAVEYGCFFNA-----TGRRTVMLVRTE   55 (121)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHh-----cchhheEeeccc
Confidence            57999999 89999999999998     788999999875

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.18  E-value=0.09  Score=40.86  Aligned_cols=35  Identities=17%  Similarity=0.128  Sum_probs=27.9

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEE-eCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGV-ARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l-~R~~   64 (396)
                      .||.|.|++|-+|+.+++.+.++    ++.++.+. +|..
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~----~~~~lv~~~~~~~   40 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALAL----EGVQLGAALEREG   40 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHS----TTEECCCEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC----CCCEEEEEEeccc
Confidence            58999999999999999999874    57785544 4543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.07  E-value=0.062  Score=42.51  Aligned_cols=38  Identities=26%  Similarity=0.207  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      +.+.+|||+||+|-+|...+..+..     .|.+|+++++++.
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~-----~g~~vi~~~~~~~   61 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKM-----IGARIYTTAGSDA   61 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHH-----HTCEEEEEESSHH
T ss_pred             CCCCEEEEECCCCCcccccchhhcc-----ccccceeeecccc
Confidence            4457999999999999999988877     7899999998653

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=90.50  E-value=0.051  Score=43.45  Aligned_cols=34  Identities=18%  Similarity=0.164  Sum_probs=30.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ++|.|.|| |.+|+.++..++.     .|++|+++++++.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~-----~G~~V~l~D~~~~   38 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSAS-----KGTPILMKDINEH   38 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHH-----TTCCEEEECSSHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHh-----CCCeEEEEECCHH
Confidence            58999995 9999999999988     7999999998753

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=90.43  E-value=0.08  Score=41.69  Aligned_cols=38  Identities=16%  Similarity=0.038  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      +.+.+|||+||+|-+|..++..+..     .|.+|+++++++.
T Consensus        27 ~~g~~Vlv~ga~g~vG~~~iqlak~-----~Ga~Vi~~~~s~~   64 (179)
T d1qora2          27 KPDEQFLFHAAAGGVGLIACQWAKA-----LGAKLIGTVGTAQ   64 (179)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHH-----HTCEEEEEESSHH
T ss_pred             CCCCEEEEEccccccchHHHHHHHH-----hCCeEeecccchH
Confidence            4467999999999999999988877     7899999998764

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.39  E-value=0.14  Score=40.97  Aligned_cols=32  Identities=31%  Similarity=0.259  Sum_probs=27.2

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |||.|.| .||+|..++..| +     +||+|++++-++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a-----~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-S-----LQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-T-----TTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-H-----CCCcEEEEECCH
Confidence            5899998 999999998655 5     689999999764

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=90.35  E-value=0.077  Score=40.70  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=29.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |+|.+.| +|.+|+++++.|++.    ++++|++.+|++.
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~----~~~~i~v~~r~~~   35 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQ----GGYRIYIANRGAE   35 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHH----CSCEEEEECSSHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHC----CCCcEEEEeCChh
Confidence            5899998 699999999999872    3489999999764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.29  E-value=0.11  Score=39.68  Aligned_cols=33  Identities=24%  Similarity=0.117  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      .+|+|||+|| |.+|..-++.|++     .|.+|++++.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~-----~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMP-----TGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGG-----GTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-----CCCEEEEEeC
Confidence            3689999995 9999999999999     7889998864

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=90.12  E-value=0.2  Score=39.08  Aligned_cols=33  Identities=24%  Similarity=0.388  Sum_probs=26.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      .||.|.| +|++|+..++.|.+.    .+.+++++..+
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~----~~~elvav~~~   36 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQ----PDMDLVGIFSR   36 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTC----SSEEEEEEEES
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhC----CCcEEEEEEec
Confidence            5899999 799999999999974    46787766643

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=89.90  E-value=0.082  Score=41.67  Aligned_cols=68  Identities=15%  Similarity=0.132  Sum_probs=44.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC--CC-CCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN--WN-ADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~--~~-~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .+|-|.| .|.+|+.+++.|++     .||+|++.+|.+...  +. .........+ ....+++.+.+..++.++-+
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~-----~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~-a~~~~~~~~~~~~~~~ii~~   73 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMND-----HGFVVCAFNRTVSKVDDFLANEAKGTKVLG-AHSLEEMVSKLKKPRRIILL   73 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSTHHHHHHHHTTTTTSSCEE-CSSHHHHHHHBCSSCEEEEC
T ss_pred             CcEEEEe-EhHHHHHHHHHHHH-----CCCeEEEEcCCHHHHHHHHHhccccccccc-hhhhhhhhhhhcccceEEEe
Confidence            5799999 89999999999999     899999999986421  00 0000000011 23455666666766654444

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.88  E-value=0.084  Score=41.93  Aligned_cols=35  Identities=17%  Similarity=0.234  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      .++||+|.| +|..|-..+..|.+     .|+ +|+++.|.+
T Consensus         3 ~~~kVaIIG-aGpaGl~aA~~l~~-----~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLG-AGPASISCASFLAR-----LGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHH-----TTCCCEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHH-----CCCCeEEEEEecC
Confidence            358999999 89999999999998     798 499999864

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=89.79  E-value=0.27  Score=35.51  Aligned_cols=46  Identities=24%  Similarity=0.159  Sum_probs=33.5

Q ss_pred             ccccccccccCcCCCCCCEEEEEcCCChhHHHHHHHc---CCCCCCCCCcEEEEEeCCC
Q 016047            9 IGAARKFEEDEPARSYQSVALIVGVTGIVGNSLAEIL---PLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~iLVtGatGfiG~~l~~~L---~~~~~~~~g~~V~~l~R~~   64 (396)
                      ++++--|++    +..+++++|.| .|++|-.++..|   .+     .|.+|+.+.|.+
T Consensus         6 ~ts~~~~~l----~~~p~~v~IiG-gG~ig~E~A~~l~~~~~-----~g~~Vtli~~~~   54 (117)
T d1feca2           6 ITSNEAFYL----DEAPKRALCVG-GGYISIEFAGIFNAYKA-----RGGQVDLAYRGD   54 (117)
T ss_dssp             BCHHHHTTC----SSCCSEEEEEC-SSHHHHHHHHHHHHHSC-----TTCEEEEEESSS
T ss_pred             EchHHhhCc----cccCCeEEEEC-CChHHHHHHHHhHhhcc-----cccccceecccc
Confidence            444445552    33458999999 899999998654   34     588999999864

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=89.77  E-value=0.024  Score=44.52  Aligned_cols=73  Identities=11%  Similarity=0.049  Sum_probs=46.5

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCC-CCCCCCeeEEEecCCChHHHHHHHhcCCCeeEE
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPN-WNADHLVEYVQCDVSDPEETQAKLSQLTDVTHI  100 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~  100 (396)
                      .+.+.+|||.|+ |-+|...+..+..     .|.+|+++++++... ....-+.+ ...|..+.+......+++|.|+.+
T Consensus        28 ~~~G~~VlI~Ga-G~vG~~a~qlak~-----~Ga~~i~~~~~~~~~~~a~~lGad-~~i~~~~~~~~~~~~~~~D~vid~  100 (168)
T d1uufa2          28 AGPGKKVGVVGI-GGLGHMGIKLAHA-----MGAHVVAFTTSEAKREAAKALGAD-EVVNSRNADEMAAHLKSFDFILNT  100 (168)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESSGGGHHHHHHHTCS-EEEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCCCCEEEEecc-chHHHHHHHHhhc-----ccccchhhccchhHHHHHhccCCc-EEEECchhhHHHHhcCCCceeeee
Confidence            345679999985 8899999888777     788988888876432 00001122 235666666555555566666665


Q ss_pred             E
Q 016047          101 F  101 (396)
Q Consensus       101 a  101 (396)
                      .
T Consensus       101 ~  101 (168)
T d1uufa2         101 V  101 (168)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.76  E-value=0.049  Score=43.46  Aligned_cols=64  Identities=17%  Similarity=0.119  Sum_probs=43.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      ..++++.|.| .|.||+.+++.|..     -|.+|++.++...........++        ..+++++++.+|. ++||
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~-----fg~~v~~~d~~~~~~~~~~~~~~--------~~~l~ell~~sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAA-----FGAYVVAYDPYVSPARAAQLGIE--------LLSLDDLLARADFISVHL  106 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEECTTSCHHHHHHHTCE--------ECCHHHHHHHCSEEEECC
T ss_pred             ccceeeeecc-ccchhHHHHHHhhh-----ccceEEeecCCCChhHHhhcCce--------eccHHHHHhhCCEEEEcC
Confidence            3568899999 99999999999988     78999999876432100001111        1235678888986 4444

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.60  E-value=0.11  Score=44.89  Aligned_cols=38  Identities=29%  Similarity=0.284  Sum_probs=33.1

Q ss_pred             CCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           21 ARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        21 ~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +...+|+|+|+| +|..|...+..|.+     .|++|+++.+.+
T Consensus        26 ~~~~pkkV~IIG-aG~aGLsaA~~L~~-----~G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVG-AGMAGLSAAYVLAG-----AGHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEEC-CBHHHHHHHHHHHH-----HTCEEEEECSSS
T ss_pred             CCCCCCeEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEeCCC
Confidence            344568999999 89999999999998     899999999764

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=89.56  E-value=0.11  Score=43.70  Aligned_cols=31  Identities=23%  Similarity=0.326  Sum_probs=28.9

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |+|+| +|..|..++.+|.+     +|++|+++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~-----~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAK-----ENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHH-----CCCcEEEEeCCC
Confidence            99999 89999999999999     899999999864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.28  E-value=0.35  Score=34.94  Aligned_cols=35  Identities=23%  Similarity=0.140  Sum_probs=27.9

Q ss_pred             CCCEEEEEcCCChhHHHHHHH---cCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEI---LPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~---L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+++++|.| .|++|..++..   |..     +|.+|+.+.|.+
T Consensus        19 ~p~~v~ivG-gG~ig~E~A~~l~~l~~-----~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVG-GGFISVEFAGIFNAYKP-----KDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHHCC-----TTCEEEEEESSS
T ss_pred             cCCeEEEEC-CcHHHHHHHHHhhhccc-----CCcEEEEEeccc
Confidence            457999999 59999999854   444     577899999864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.16  E-value=0.21  Score=41.00  Aligned_cols=45  Identities=20%  Similarity=0.255  Sum_probs=35.6

Q ss_pred             cccccCcCC-CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           14 KFEEDEPAR-SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        14 ~~~~~~~~~-~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .|++...++ ..+++|+|.| +|+.|...+..|.+     .|++|+++.+.+
T Consensus        37 ~~~p~~~~~~~~~k~VvIIG-aGpAGl~aA~~l~~-----~G~~v~l~E~~~   82 (233)
T d1djqa3          37 GWHPEKFRQTKNKDSVLIVG-AGPSGSEAARVLME-----SGYTVHLTDTAE   82 (233)
T ss_dssp             CCCSSCCCCCSSCCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CCCCCccCcccCCceEEEEc-ccHHHHHHHHHHHH-----hccceeeEeecc
Confidence            444433333 3468999999 89999999999998     899999998764

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.10  E-value=0.15  Score=39.58  Aligned_cols=38  Identities=21%  Similarity=0.170  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKP   66 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~   66 (396)
                      ..+.+|+|+|+ |-+|...+..+..     .|.+|+++++++.+
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~-----~G~~vi~~~~~~~k   63 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKA-----MGAETYVISRSSRK   63 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHH-----HTCEEEEEESSSTT
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhh-----ccccccccccchhH
Confidence            34579999996 9999998877766     78999999987543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=88.80  E-value=0.17  Score=42.00  Aligned_cols=35  Identities=26%  Similarity=0.227  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .+||+|.| .|..|..++..|.+     .|++|+++.|.+.
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~-----~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRD-----AGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHH-----CCCCEEEEeCCCC
Confidence            46899999 89999999999998     8999999998654

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=88.66  E-value=0.26  Score=36.33  Aligned_cols=34  Identities=24%  Similarity=0.290  Sum_probs=28.0

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+|+|.| +|.+|..|+++|...    .+|+++++.-+.
T Consensus         4 ~~v~I~G-aG~~G~~l~~~l~~~----~~~~iv~fiDdd   37 (126)
T d2dt5a2           4 WGLCIVG-MGRLGSALADYPGFG----ESFELRGFFDVD   37 (126)
T ss_dssp             EEEEEEC-CSHHHHHHHHCSCCC----SSEEEEEEEESC
T ss_pred             ceEEEEc-CCHHHHHHHHhHhhc----CCcEEEEEEeCc
Confidence            4899999 899999999988653    689988877643

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=88.53  E-value=0.22  Score=33.23  Aligned_cols=51  Identities=14%  Similarity=0.165  Sum_probs=38.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSD   83 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d   83 (396)
                      |+|.|.| +|.+|+-++..-.+     -|++|+.++-.+..... ....+++..++.+
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~-----LG~~v~vldp~~~~pa~-~~a~dvIT~e~E~   52 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEP-----LGIAVWPVGLDAEPAAV-PFQQSVITAEIER   52 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGG-----GTEEEEEECTTSCGGGS-CGGGSEEEESSSC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHH-----cCCEEEEEcCCCCCccc-ccccceEEEeecc
Confidence            6899999 99999999999988     79999999976543211 1233577777664

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=88.21  E-value=0.21  Score=42.15  Aligned_cols=34  Identities=18%  Similarity=0.196  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .|||+|+| +|.-|...+.+|.+     .|++|+++.+.+
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~-----~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKI-----HGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHT-----TSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHh-----CCCCEEEEeCCC
Confidence            37999999 89999999999998     899999998764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.14  E-value=0.29  Score=35.91  Aligned_cols=68  Identities=13%  Similarity=0.133  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCC----------ChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHh
Q 016047           23 SYQSVALIVGVT----------GIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLS   92 (396)
Q Consensus        23 ~~~~~iLVtGat----------GfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   92 (396)
                      ...|+|||.|+.          -+-+.+.+++|.+     .|++++.+.-+|.....+..-..-+...-...+.+.+.++
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke-----~g~~~iliN~NP~TVstd~d~aD~lYfePlt~e~v~~Ii~   79 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALRE-----EGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIE   79 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHH-----HTCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHH-----cCCeEEEecCchHhhhcChhhcceeeeecCCHHHHHHHHH
Confidence            445899999973          4678999999999     8999999988875432111222345566667778877776


Q ss_pred             cCC
Q 016047           93 QLT   95 (396)
Q Consensus        93 ~~~   95 (396)
                      .-.
T Consensus        80 ~E~   82 (127)
T d1a9xa3          80 KER   82 (127)
T ss_dssp             HHC
T ss_pred             HhC
Confidence            533

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=87.25  E-value=0.073  Score=42.68  Aligned_cols=65  Identities=12%  Similarity=-0.008  Sum_probs=43.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCC-eeEE
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTD-VTHI  100 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~-V~h~  100 (396)
                      .++++.|.| .|.||+.+++.|..     -|.+|.+.++.......  ..    .......++++++++.+|. ++|+
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~-----fg~~v~~~d~~~~~~~~--~~----~~~~~~~~~l~~ll~~sD~v~l~~  111 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQG-----FDMDIDYFDTHRASSSD--EA----SYQATFHDSLDSLLSVSQFFSLNA  111 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEECSSCCCHHH--HH----HHTCEECSSHHHHHHHCSEEEECC
T ss_pred             cccceEEee-cccchHHHHHHHHh-----hccccccccccccccch--hh----cccccccCCHHHHHhhCCeEEecC
Confidence            468999999 99999999999988     79999999875432100  00    0000112346778888886 3444

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.23  E-value=0.83  Score=32.97  Aligned_cols=64  Identities=8%  Similarity=-0.004  Sum_probs=45.5

Q ss_pred             CCEEEEEcCCC----------hhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhc
Q 016047           25 QSVALIVGVTG----------IVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQ   93 (396)
Q Consensus        25 ~~~iLVtGatG----------fiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   93 (396)
                      .++|||.|+..          +-+.+.++.|.+     .|++++.+..+|.....+..-..-+...-...+.+.+.+..
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~-----~g~~~IliN~NPeTVstd~d~aD~lYfeplt~e~v~~Ii~~   77 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALRE-----DGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRI   77 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHH-----TTCEEEEECCCTTSSTTSTTSSSEEECCCCSHHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHh-----cCCeEEEEecChhhhhcChhhcCceEEccCCHHHHHHHHHH
Confidence            47999999733          788999999999     89999999888765432222334455555666777665544

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=87.10  E-value=0.5  Score=36.40  Aligned_cols=56  Identities=16%  Similarity=0.168  Sum_probs=43.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ..+|+|+|.|.+..+|+.|+..|.+     +|..|+.+.....                    ++.+.++.+|.|+..++
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~-----~gatVt~~h~~t~--------------------~l~~~~~~ADivI~a~G   89 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLL-----AGCTTTVTHRFTK--------------------NLRHHVENADLLIVAVG   89 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHT-----TTCEEEEECSSCS--------------------CHHHHHHHCSEEEECSC
T ss_pred             cccceEEEEeccccccHHHHHHHHH-----hhccccccccccc--------------------hhHHHHhhhhHhhhhcc
Confidence            3468999999999999999999998     7889987754321                    13556778887777755


Q ss_pred             e
Q 016047          103 V  103 (396)
Q Consensus       103 ~  103 (396)
                      .
T Consensus        90 ~   90 (166)
T d1b0aa1          90 K   90 (166)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=86.84  E-value=0.2  Score=38.81  Aligned_cols=36  Identities=22%  Similarity=0.301  Sum_probs=28.5

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .|||+|.| .|+.|..++..|.+..   ...+|+++.+.+
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~---~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLAD---PSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHC---TTSEEEEECSCS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcC---CCCcEEEEECCC
Confidence            47999999 8999999999998721   124788887764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=86.56  E-value=0.064  Score=42.92  Aligned_cols=35  Identities=14%  Similarity=-0.019  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+++|.|.| .|.||+.+++.|..     -|.+|...+|..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~-----fg~~v~~~d~~~   77 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAP-----FDVHLHYTDRHR   77 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGG-----GTCEEEEECSSC
T ss_pred             cccceeecc-ccccchhhhhhhhc-----cCceEEEEeecc
Confidence            468999999 99999999999987     788999999864

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.48  E-value=0.13  Score=43.62  Aligned_cols=35  Identities=20%  Similarity=0.256  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |+.+|+|.| .|..|..++..|.+     .|++|+++.|++
T Consensus         1 mk~~V~IvG-aGp~Gl~~A~~L~~-----~G~~v~vlE~~~   35 (292)
T d1k0ia1           1 MKTQVAIIG-AGPSGLLLGQLLHK-----AGIDNVILERQT   35 (292)
T ss_dssp             CBCSEEEEC-CSHHHHHHHHHHHH-----HTCCEEEECSSC
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHH-----CCCCEEEEeCCC
Confidence            556899999 78999999999998     899999999875

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.26  E-value=0.37  Score=41.81  Aligned_cols=36  Identities=25%  Similarity=0.151  Sum_probs=29.3

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |+|+|+| +|.-|...+..|++..   .+++|+++-|+..
T Consensus         5 KrVaIIG-aG~sGl~~A~~L~~~~---~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIG-AGPSGLVTAKALLAEK---AFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTT---CCSEEEEECSSSS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHhC---CCCCEEEEECCCC
Confidence            6899999 8999999999987621   2369999998753

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=85.87  E-value=0.3  Score=38.34  Aligned_cols=37  Identities=22%  Similarity=0.081  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~~   65 (396)
                      +.+.+|||+|| |-+|...+..+..     .|. +|+++++++.
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~-----~Ga~~Vi~~~~~~~   64 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARS-----LGAENVIVIAGSPN   64 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHH-----TTBSEEEEEESCHH
T ss_pred             CCCCEEEEECC-Cccchhheecccc-----cccccccccccccc
Confidence            34579999996 8999998888877     787 7999998754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.81  E-value=0.24  Score=41.66  Aligned_cols=33  Identities=21%  Similarity=0.161  Sum_probs=29.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |+|+|+| +|.-|...+.+|.+     .|++|+++-+.+
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~-----~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRS-----RGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHT-----TTCCEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHh-----CCCCEEEEecCC
Confidence            4799999 69999999999999     899999998764

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.32  E-value=0.42  Score=36.76  Aligned_cols=37  Identities=14%  Similarity=0.072  Sum_probs=30.1

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ..+.+|+|.|+ |-+|...+..+..     .|.+|+++++++.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~-----~G~~Vi~~~~~~~   62 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARA-----MGLHVAAIDIDDA   62 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHH-----TTCEEEEEESCHH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHH-----cCCccceecchhh
Confidence            34578999985 9999998887776     7899999998753

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.59  E-value=0.51  Score=36.01  Aligned_cols=32  Identities=31%  Similarity=0.449  Sum_probs=27.2

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ||+|.| .|++|..++..|.+      +.+|+++.|.+.
T Consensus         2 rVvIIG-gG~~G~e~A~~l~~------~~~Vtvv~~~~~   33 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLSQ------TYEVTVIDKEPV   33 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT------TSEEEEECSSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHHc------CCCEEEEecccc
Confidence            799999 89999999999964      669999987653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=84.42  E-value=0.36  Score=37.59  Aligned_cols=108  Identities=11%  Similarity=-0.041  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCChhHHH--HHHHcCCCCCCCCCcEEEEEeCCCCCC-----------CCCCCCeeEEEecCCChHHHHHHH
Q 016047           25 QSVALIVGVTGIVGNS--LAEILPLPDTPGGPWKVYGVARRPKPN-----------WNADHLVEYVQCDVSDPEETQAKL   91 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~--l~~~L~~~~~~~~g~~V~~l~R~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~   91 (396)
                      ++||.|.|| |.+|..  ++..|+..+.. .+.+|+.+++++...           .......++...     .+.++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l-~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~-----td~~eaL   74 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGL-SGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLDDVI   74 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGG-TTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhcccc-CCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe-----CChhhcc
Confidence            358999995 888865  33334432111 245899999875321           000112222222     2356788


Q ss_pred             hcCCCeeEEEEeccCCCccHHHH--------------------------HHhHHHHHHHHHHHHcccCCCcceE
Q 016047           92 SQLTDVTHIFYVTWTNRSTEAEN--------------------------CKINGSMFRNVLRAVIPNAPNLRHV  139 (396)
Q Consensus        92 ~~~~~V~h~a~~~~~~~~~~~~~--------------------------~~~nv~gt~~ll~a~~~~~~~~~~~  139 (396)
                      .++|.|+..+...........+.                          ..-|+.-.+.+++.+++.+++-..+
T Consensus        75 ~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i  148 (171)
T d1obba1          75 IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYL  148 (171)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             cCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEE
Confidence            99997776644211000000000                          1237788888888888877554433

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=84.14  E-value=0.13  Score=40.49  Aligned_cols=34  Identities=12%  Similarity=0.213  Sum_probs=26.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVAR   62 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R   62 (396)
                      .|+.+|+|.| +|++|-.++..|.+     .|.+|.++.+
T Consensus         1 ~m~a~VvIIG-gG~~G~e~A~~l~~-----~g~~v~i~~~   34 (183)
T d1d7ya1           1 ALKAPVVVLG-AGLASVSFVAELRQ-----AGYQGLITVV   34 (183)
T ss_dssp             CCCSSEEEEC-CSHHHHHHHHHHHH-----HTCCSCEEEE
T ss_pred             CCCCCEEEEC-ccHHHHHHHHHHHh-----cCCceEEEEE
Confidence            3778899999 99999999999987     5666444443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=84.12  E-value=0.52  Score=36.28  Aligned_cols=37  Identities=22%  Similarity=0.221  Sum_probs=30.7

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      ..+.+|||+| +|-+|...+..+..     .|.+|+++++++.
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~-----~Ga~vi~v~~~~~   61 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKA-----YGAFVVCTARSPR   61 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEEESCHH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhh-----hcccccccchHHH
Confidence            3456899998 79999999888876     7889999998754

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.11  E-value=0.41  Score=40.91  Aligned_cols=36  Identities=22%  Similarity=0.230  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+..||+|+| +|.-|-.-+.+|.+     .|++|+++-.++
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~-----~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQS-----FGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHH-----TTCEEEEECSSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHh-----CCCCEEEEeCCC
Confidence            4557899999 89999999999998     899999997653

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.82  E-value=0.32  Score=41.69  Aligned_cols=38  Identities=18%  Similarity=0.047  Sum_probs=32.3

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |.....|+|+| +|+.|-..+.+|.+     .|.+|+++.+.+.
T Consensus         4 p~~~~dV~IIG-AG~sGl~~a~~L~~-----~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           4 PPEEVDVLVVG-AGFSGLYALYRLRE-----LGRSVHVIETAGD   41 (298)
T ss_dssp             CCSEEEEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSSS
T ss_pred             CCCCCCEEEEC-ccHHHHHHHHHHHh-----CCCCEEEEEcCCC
Confidence            33445799999 89999999999998     8999999998753

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=83.59  E-value=0.56  Score=37.50  Aligned_cols=37  Identities=22%  Similarity=0.197  Sum_probs=32.1

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ...+++|+|-| -|.+|+++++.|.+     .|.+|++.+.++
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~-----~Gakvvv~d~d~   60 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAE-----AGAQLLVADTDT   60 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHH-----CCCEEEEecchH
Confidence            45678999999 99999999999999     899999877653

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=83.41  E-value=0.5  Score=36.57  Aligned_cols=36  Identities=17%  Similarity=-0.008  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..+|+|||.| +|-.+++++..|.+     .|.+|+++.|..
T Consensus        16 ~~~k~vlIlG-aGGaarai~~al~~-----~g~~i~I~nRt~   51 (170)
T d1nyta1          16 RPGLRILLIG-AGGASRGVLLPLLS-----LDCAVTITNRTV   51 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSSH
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHhcc-----cceEEEeccchH
Confidence            3468999999 57789999999998     678899888864

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=83.26  E-value=0.52  Score=33.35  Aligned_cols=40  Identities=18%  Similarity=0.023  Sum_probs=30.5

Q ss_pred             cCCCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           20 PARSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        20 ~~~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      +.+-.+|+|||.| +|.-|.-++..|.+     ..-+|+.+.|++.
T Consensus        27 ~~~f~gK~VlVVG-~g~Sa~dia~~l~~-----~ak~v~~~~~r~~   66 (107)
T d2gv8a2          27 PELFVGESVLVVG-GASSANDLVRHLTP-----VAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGGTTCCEEEEC-SSHHHHHHHHHHTT-----TSCSSEEEECTTC
T ss_pred             hhhcCCCeEEEEC-CCCCHHHHHHHHHH-----hcCEEEEEEecCc
Confidence            3445679999999 88999999999987     3335666666654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.04  E-value=1  Score=34.81  Aligned_cols=55  Identities=15%  Similarity=0.108  Sum_probs=42.0

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCCCeeEEEE
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLTDVTHIFY  102 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~V~h~a~  102 (396)
                      ..+|+|.|.|.+..+|..|+..|.+     +|..|+.+......                    +.+..+.+|.|+..++
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~-----~gatVt~~~~~t~~--------------------l~~~~~~aDivi~a~G   91 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLW-----NNATVTTCHSKTAH--------------------LDEEVNKGDILVVATG   91 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHH-----TTCEEEEECTTCSS--------------------HHHHHTTCSEEEECCC
T ss_pred             cccceEEEEecCCccchHHHHHHHh-----ccCceEEEeccccc--------------------HHHHHhhccchhhccc
Confidence            4568999999999999999999998     78889877654321                    3455677776666544

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=82.94  E-value=0.42  Score=37.82  Aligned_cols=36  Identities=11%  Similarity=-0.007  Sum_probs=28.6

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      |||+|.| .|++|..++..|.+..   .+.+|+.+.|.+.
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~---~~~~V~v~~~~~~   36 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLH---PDAEIQWYEKGDF   36 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHC---TTSEEEEEESSSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcC---CCCeEEEEeCCCc
Confidence            5899999 8899999999997521   3568998888653

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.65  E-value=0.26  Score=38.34  Aligned_cols=76  Identities=18%  Similarity=0.155  Sum_probs=49.7

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCC--CC-CCeeEEEecC--CChHHHHHHHhcCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWN--AD-HLVEYVQCDV--SDPEETQAKLSQLTD   96 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~--~~-~~v~~~~~Dl--~d~~~~~~~~~~~~~   96 (396)
                      +..+|+|+|.|-+.-+|+.|+..|++     +|..|+.+.........  .. .-......|+  ..++.+++....+|.
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~-----~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDI  100 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLAN-----DGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDV  100 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHT-----TSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHH-----CCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCE
Confidence            44579999999999999999999998     78888877654321100  00 0011122333  345678888888887


Q ss_pred             eeEEEE
Q 016047           97 VTHIFY  102 (396)
Q Consensus        97 V~h~a~  102 (396)
                      |+..++
T Consensus       101 vIsavG  106 (171)
T d1edza1         101 VITGVP  106 (171)
T ss_dssp             EEECCC
T ss_pred             EEEccC
Confidence            776543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=82.33  E-value=0.55  Score=35.60  Aligned_cols=57  Identities=21%  Similarity=0.081  Sum_probs=38.6

Q ss_pred             CCEEEEE-cCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCCCCCCCCCCeeEEEecCCChHHHHHHHhcCC
Q 016047           25 QSVALIV-GVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPKPNWNADHLVEYVQCDVSDPEETQAKLSQLT   95 (396)
Q Consensus        25 ~~~iLVt-GatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~   95 (396)
                      ++.++|. .+.||+|..++..|.+     .|++|+.+.+.+.-.    +     ..|-.....+.+.+....
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~-----~G~~Vtlv~~~~~~~----~-----~~~~~~~~~~~~~l~~~G   96 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLAT-----AGHEVTIVSGVHLAN----Y-----MHFTLEYPNMMRRLHELH   96 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHH-----TTCEEEEEESSCTTT----H-----HHHTTCHHHHHHHHHHTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHH-----cCCeEEEEecCCccc----c-----ccchhHHHHHHHHHhhcc
Confidence            3566665 3479999999999999     899999999864221    0     124444455555565544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.24  E-value=0.36  Score=39.14  Aligned_cols=31  Identities=26%  Similarity=0.462  Sum_probs=28.9

Q ss_pred             EEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           28 ALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        28 iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      |+|.| +|+-|...+.+|.+     .|++|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~-----~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSV-----DGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHH-----CCCCEEEEcCCC
Confidence            79999 99999999999998     899999999875

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.93  E-value=0.46  Score=40.54  Aligned_cols=33  Identities=30%  Similarity=0.311  Sum_probs=29.8

Q ss_pred             CEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           26 SVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        26 ~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..|+|.| +|+.|..++++|.+     .|++|.++.+++
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~-----~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKK-----LNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGG-----GTCCEEEECSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHh-----CCCcEEEEECCC
Confidence            4699999 89999999999998     799999999875

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.80  E-value=0.48  Score=36.41  Aligned_cols=35  Identities=29%  Similarity=0.214  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      .+|++.|.| .|.+|+.+++.|..     .|.+|++....|
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg-----~G~~V~v~e~dp   57 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRG-----FGARVIITEIDP   57 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHH-----TTCEEEEECSCH
T ss_pred             cCCEEEEec-cccccHHHHHHHHh-----CCCeeEeeeccc
Confidence            468999999 99999999999998     799999998875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=81.33  E-value=0.61  Score=35.90  Aligned_cols=39  Identities=23%  Similarity=0.262  Sum_probs=31.0

Q ss_pred             CCCCCEEEEEcCCChhHHHHHHHcCCCCCCCCC-cEEEEEeCCCC
Q 016047           22 RSYQSVALIVGVTGIVGNSLAEILPLPDTPGGP-WKVYGVARRPK   65 (396)
Q Consensus        22 ~~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g-~~V~~l~R~~~   65 (396)
                      ...+.+|+|+|++|-+|...+..+..     .| .+|+++++++.
T Consensus        25 ~~~g~~vlV~G~~G~vG~~~~~~~~~-----~g~~~V~~~~~~~~   64 (170)
T d1jvba2          25 LDPTKTLLVVGAGGGLGTMAVQIAKA-----VSGATIIGVDVREE   64 (170)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHH-----HTCCEEEEEESSHH
T ss_pred             CCCCCEEEEEeccccceeeeeecccc-----cccccccccccchh
Confidence            34457999999999999998888876     55 47888887653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=80.89  E-value=0.87  Score=37.49  Aligned_cols=35  Identities=29%  Similarity=0.100  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      ..+++|+|-| -|.+|+++++.|.+     .|.+|++++-.
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~-----~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEK-----MGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHT-----TTCEEEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHH-----cCCeEEEeecc
Confidence            4568999999 99999999999999     89999988854

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.87  E-value=1.4  Score=32.18  Aligned_cols=37  Identities=19%  Similarity=0.108  Sum_probs=30.6

Q ss_pred             CCCCCEEEEEcCC---ChhHHHHHHHcCCCCCCCCC-cEEEEEeCC
Q 016047           22 RSYQSVALIVGVT---GIVGNSLAEILPLPDTPGGP-WKVYGVARR   63 (396)
Q Consensus        22 ~~~~~~iLVtGat---GfiG~~l~~~L~~~~~~~~g-~~V~~l~R~   63 (396)
                      ...+++|.|.|||   |..|..+++.|.+     .| ++|+.+..+
T Consensus         5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~-----~~~g~v~pVnP~   45 (129)
T d2csua1           5 FFNPKGIAVIGASNDPKKLGYEVFKNLKE-----YKKGKVYPVNIK   45 (129)
T ss_dssp             TTSCSEEEEETCCSCTTSHHHHHHHHHTT-----CCSSEEEEECSS
T ss_pred             hCCCCeEEEEccCCCCCCcHHHHHHHHHH-----cCCCcEEEeccC
Confidence            3457899999998   9999999999987     44 689988754

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=80.74  E-value=0.52  Score=37.14  Aligned_cols=37  Identities=24%  Similarity=0.142  Sum_probs=29.7

Q ss_pred             CCCEEEE-EcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCCC
Q 016047           24 YQSVALI-VGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRPK   65 (396)
Q Consensus        24 ~~~~iLV-tGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~~   65 (396)
                      .+.+++| +||+|-+|...+.....     .|.+|++++|.+.
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~-----~Ga~vI~~v~~~~   65 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKL-----LNFNSISVIRDRP   65 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHH-----HTCEEEEEECCCT
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhh-----cCCeEEEEEeccc
Confidence            3456777 59999999999887776     7889999998754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=80.68  E-value=0.49  Score=36.66  Aligned_cols=34  Identities=26%  Similarity=0.269  Sum_probs=27.6

Q ss_pred             CCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           25 QSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        25 ~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      +++|+|.| +|++|..++..|.+     .|.+|+++.+.+
T Consensus         3 ~~~VvIIG-gG~~G~e~A~~l~~-----~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVG-TGLAGVEVAFGLRA-----SGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHH-----TTCCSEEEEECS
T ss_pred             CCCEEEEC-CcHHHHHHHHHHHH-----cCCceEEEEecC
Confidence            46899999 89999999999998     677766655543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=80.65  E-value=0.48  Score=39.64  Aligned_cols=32  Identities=22%  Similarity=0.155  Sum_probs=29.2

Q ss_pred             EEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           27 VALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        27 ~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      -|+|.| +|..|..++.+|.+     +|++|+++.+..
T Consensus         5 DvvIIG-aGi~Gls~A~~La~-----~G~~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVG-AGSMGMAAGYQLAK-----QGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHH-----TTCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHH-----CCCcEEEEeCCC
Confidence            389999 89999999999999     899999999864

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.54  E-value=0.72  Score=33.20  Aligned_cols=33  Identities=21%  Similarity=0.218  Sum_probs=28.7

Q ss_pred             CEEEEEcCC---ChhHHHHHHHcCCCCCCCCCcEEEEEeCC
Q 016047           26 SVALIVGVT---GIVGNSLAEILPLPDTPGGPWKVYGVARR   63 (396)
Q Consensus        26 ~~iLVtGat---GfiG~~l~~~L~~~~~~~~g~~V~~l~R~   63 (396)
                      |+|.|.||+   +-.|..+++.|++     .||+|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~-----~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLS-----KGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHH-----TTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHH-----CCCEEEEEccc
Confidence            689999997   7799999999999     89999987643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=80.43  E-value=0.99  Score=35.02  Aligned_cols=35  Identities=17%  Similarity=0.108  Sum_probs=28.9

Q ss_pred             CCCCEEEEEcCCChhHHHHHHHcCCCCCCCCCcEEEEEeCCC
Q 016047           23 SYQSVALIVGVTGIVGNSLAEILPLPDTPGGPWKVYGVARRP   64 (396)
Q Consensus        23 ~~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~~V~~l~R~~   64 (396)
                      ..+|+|||.| +|-.++.++..|.+     .| +|+++.|..
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~-----~~-~i~I~nR~~   50 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAK-----DN-NIIIANRTV   50 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTS-----SS-EEEEECSSH
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHcc-----cc-ceeeehhhh
Confidence            4568999999 67789999999976     45 899888864

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=80.39  E-value=0.47  Score=36.65  Aligned_cols=35  Identities=14%  Similarity=0.202  Sum_probs=29.1

Q ss_pred             CCCEEEEEcCCChhHHHHHHHcCCCCCCCCCc-EEEEEeCCC
Q 016047           24 YQSVALIVGVTGIVGNSLAEILPLPDTPGGPW-KVYGVARRP   64 (396)
Q Consensus        24 ~~~~iLVtGatGfiG~~l~~~L~~~~~~~~g~-~V~~l~R~~   64 (396)
                      .+++|||.| +|-.|++++..|.+     .|. +|+++.|+.
T Consensus        16 ~~~~vlIlG-aGGaarai~~aL~~-----~g~~~I~I~nR~~   51 (167)
T d1npya1          16 KNAKVIVHG-SGGMAKAVVAAFKN-----SGFEKLKIYARNV   51 (167)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHH-----TTCCCEEEECSCH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHH-----CCCCEEEEecccH
Confidence            457899999 58889999999998     676 588888864