Citrus Sinensis ID: 016052

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390------
MASIRRTLSPAYHDRQYQNGANSPFSPSHHKLFTSGKYTSSLLAVNLRRKAWRKSLYRCLVFFALGLLLGMTPFGHVTTDIENRDVFFEIKPPHVNVQLDSDNRSDRMSKRDEILLDAVSLGVDFRNEINTVESYRYDFEPRKQLIVITPTYNRAMQAYFLNRLAQVLRLVQPPLLWIVVEENAASYETAELLRKTGVMYRQLVSQKNSSSVKDRGVHQRNLALEHIERHRLDGIVYFADDDNIYTMDLFDSLREISRFGTWPVAMLAQSKNKAIIEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWQRPFSNSIRQLDTVKEGFQETTFIEQVVEDESQMEGTPPSCSRILNWHLHLDAHNLPYPRGWLLPRNLEVVLPVE
ccccccccccccccccccccccccccccccccccccccccccHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHccEEcccccEEEEccccEEEEEcEEEcccEEEEEEccccccccccccccccEEEEEEccccccccccccccccccccccccccccHHHHHHHHccccccCECccccccEEEEEEccccccccccccccccccccCEEcccc
***********************************************RRKAWRKSLYRCLVFFALGLLLGMTPFGHVTTDIENR****************************EILL***SL*VDFRNEINTVESYRYDFEPRKQLIVITPTYNRAMQAYFLNRLAQVLRLVQPPLLWIVVEENAASYETAELLRKTGVMYRQLVSQKNSSSVKDRGVHQRNLALEHIERHRLDGIVYFADDDNIYTMDLFDSLREISRFGTWPVAMLAQSKNKAIIEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWQRPFSNSIRQLDTVKEGFQETTFIEQVVEDESQMEGTPPSCSRILNWHLHLDAHNLPYPRGWLLPRNLEVVLPV*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MASIRRTLSPAYHDRQYQNGANSPFSPSHHKLFTSGKYTSSLLAVNLRRKAWRKSLYRCLVFFALGLLLGMTPFGHVTTDIENRDVFFEIKPPHVNVQLDSDNRSDRMSKRDEILLDAVSLGVDFRNEINTVESYRYDFEPRKQLIVITPTYNRAMQAYFLNRLAQVLRLVQPPLLWIVVEENAASYETAELLRKTGVMYRQLVSQKNSSSVKDRGVHQRNLALEHIERHRLDGIVYFADDDNIYTMDLFDSLREISRFGTWPVAMLAQSKNKAIIEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWQRPFSNSIRQLDTVKEGFQETTFIEQVVEDESQMEGTPPSCSRILNWHLHLDAHNLPYPRGWLLPRNLEVVLPVE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable beta-1,4-xylosyltransferase IRX9H Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.probableQ9SXC4
Probable glucuronosyltransferase Os10g0205300 Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.probableQ8S626

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2D0J, chain A
Confidence level:very confident
Coverage over the Query: 142-387
View the alignment between query and template
View the model in PyMOL