Citrus Sinensis ID: 016094
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 395 | 2.2.26 [Sep-21-2011] | |||||||
| P51090 | 393 | Chalcone synthase OS=Viti | yes | no | 0.994 | 1.0 | 0.637 | 1e-148 | |
| Q9XJ57 | 391 | Chalcone synthase 2 OS=Ci | no | no | 0.989 | 1.0 | 0.636 | 1e-148 | |
| P51075 | 395 | Chalcone synthase OS=Betu | N/A | no | 0.984 | 0.984 | 0.634 | 1e-147 | |
| Q2R3A1 | 398 | Chalcone synthase 1 OS=Or | yes | no | 0.984 | 0.977 | 0.616 | 1e-147 | |
| A2ZEX7 | 398 | Chalcone synthase 1 OS=Or | N/A | no | 0.984 | 0.977 | 0.613 | 1e-147 | |
| O23730 | 394 | Chalcone synthase 4 OS=Br | N/A | no | 0.974 | 0.977 | 0.627 | 1e-146 | |
| O23729 | 394 | Chalcone synthase 3 OS=Br | N/A | no | 0.974 | 0.977 | 0.627 | 1e-146 | |
| P16107 | 398 | Chalcone synthase OS=Petr | N/A | no | 0.956 | 0.949 | 0.647 | 1e-146 | |
| O23731 | 394 | Chalcone synthase 8 OS=Br | N/A | no | 0.974 | 0.977 | 0.627 | 1e-146 | |
| Q9FSB8 | 393 | Chalcone synthase 2 OS=Ru | N/A | no | 0.984 | 0.989 | 0.634 | 1e-146 |
| >sp|P51090|CHSY_VITVI Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/395 (63%), Positives = 309/395 (78%), Gaps = 2/395 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M +V R+ GP A +LAIGTATP NC YQADYPD++FR+TNSEH ELKEKF+R+
Sbjct: 1 MVSVAEIRKAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
CE+S I KRY +LTEEILKENPN+ Y APSLDAR M++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CEKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL+PSV RLM+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN G+RVLVVC +IT + F P++ LD LVGQA+FGDGAAA IIGADPD + E PLF+
Sbjct: 180 NNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ELPLFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P++E + GHL+E+G + L KD+P +I K I+K L +A +PIGISDWNSL
Sbjct: 239 LVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSL 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL +EKL A+R+ LSEYGN+ + VLFILD++RKKS EE K
Sbjct: 299 FWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDSAN 395
+TGEGLE+GVLFGFGPG+TVETVVL S+ +A+
Sbjct: 359 GSTGEGLEWGVLFGFGPGLTVETVVLHSVSAPAAH 393
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Vitis vinifera (taxid: 29760) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4 |
| >sp|Q9XJ57|CHS2_CITSI Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/393 (63%), Positives = 308/393 (78%), Gaps = 2/393 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M TV+ + R+ GP A +LAIGTATP + QADYPD++FR+T SEH ELKEKF+R+
Sbjct: 1 MATVQEIRNAQRADGP-ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S I+KRY YLTEEILKENPNM Y APSLDAR +++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHLIF GVDMPGAD +L L+GL PSV R M+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN GARVLVVC +IT + F P + LD LVGQA+FGDGAAA I+GADPD S+ ERPL+Q
Sbjct: 180 NNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLYQ 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S SQ +P+++ + GHL+E+G + L KD+P +I K I+K L++A +P+GISDWNS+
Sbjct: 239 LVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSI 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL EKL A+R LSEYGN+ + VLFILD++RKKS EE K
Sbjct: 299 FWIAHPGGPAILDQVESKLGLKGEKLKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDS 393
ATTGEGL++GVLFGFGPG+TVETVVL S+PI +
Sbjct: 359 ATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 391
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Citrus sinensis (taxid: 2711) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P51075|CHSY_BETPN Chalcone synthase OS=Betula pendula GN=CHS PE=2 SV=2 | Back alignment and function description |
|---|
Score = 522 bits (1345), Expect = e-147, Method: Compositional matrix adjust.
Identities = 248/391 (63%), Positives = 306/391 (78%), Gaps = 2/391 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M +V+ R+ GP A +LAIGTATP NC QADYPD++FR+T S+H ELKEKF+R+
Sbjct: 1 MASVEEIRKAQRAHGP-ATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S I+KRY YL EEIL ENPNM Y APSLDAR +++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CDKSMIKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL PSV RLM+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN GARVLVVC +IT + F PT+ LD LVGQA+FGDGAAA I+GADPD S+ ERPLF+
Sbjct: 180 NNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P+++ + GHL+E+G + L KD+P II K I+K LA+A +P+GISDWNSL
Sbjct: 239 LISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLAEAFAPLGISDWNSL 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL +EKL A+R+ LSEYGN+ + VLFILD++R+ S E K
Sbjct: 299 FWIAHPGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSLEGGK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391
TTGEGLE+GVLFGFGPG+TVETVVL S+P+
Sbjct: 359 VTTGEGLEWGVLFGFGPGLTVETVVLHSVPV 389
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Betula pendula (taxid: 3505) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q2R3A1|CHS1_ORYSJ Chalcone synthase 1 OS=Oryza sativa subsp. japonica GN=CHS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 241/391 (61%), Positives = 311/391 (79%), Gaps = 2/391 (0%)
Query: 3 TVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICE 62
TV+ R+ GP A +LAIGTATP NC YQADYPD++FR+T SEH +ELKEKF+R+C+
Sbjct: 6 TVEEVRRAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCD 64
Query: 63 RSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPV 122
+S IRKRY +LTEEIL+ENPNM Y APSLDAR +++ EVPKLGK AA KAIKEWGQP
Sbjct: 65 KSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPR 124
Query: 123 SKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182
S+ITHL+F GVDMPGAD +L +LGL P+VNRLM+Y QGC+ GG V+R AKD+AENN
Sbjct: 125 SRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDLAENN 184
Query: 183 PGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVL 242
GARVL VC +IT + F P+E+ LD +VGQA+FGDGAAA I+G+DPD ++ ERPLFQ++
Sbjct: 185 RGARVLAVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDPDEAV-ERPLFQMV 243
Query: 243 SCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFY 302
S SQ +P++E + GHL+E+G + L KD+P +I K I++ L DA +P+GISDWNS+F+
Sbjct: 244 SASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALGDAFTPLGISDWNSIFW 303
Query: 303 IVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362
+ HPGG ILDQVE +GL KE++ A+R+ LSEYGN+ + VLFILD++RK+S E+ AT
Sbjct: 304 VAHPGGPAILDQVEAKVGLDKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHAT 363
Query: 363 TGEGLEYGVLFGFGPGITVETVVLRSIPIDS 393
TGEG+++GVLFGFGPG+TVETVVL S+PI +
Sbjct: 364 TGEGMDWGVLFGFGPGLTVETVVLHSVPITA 394
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|A2ZEX7|CHS1_ORYSI Chalcone synthase 1 OS=Oryza sativa subsp. indica GN=CHS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 520 bits (1340), Expect = e-147, Method: Compositional matrix adjust.
Identities = 240/391 (61%), Positives = 311/391 (79%), Gaps = 2/391 (0%)
Query: 3 TVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICE 62
TV+ R+ GP A +LAIGTATP NC YQADYPD++FR+T SEH +ELKEKF+R+C+
Sbjct: 6 TVEEVRRAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCD 64
Query: 63 RSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPV 122
+S IRKRY +LTEEIL+ENPNM Y APSLDAR +++ EVPKLGK AA KAIKEWGQP
Sbjct: 65 KSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPR 124
Query: 123 SKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182
S+ITHL+F GVDMPGAD +L +LGL P+V+RLM+Y QGC+ GG V+R AKD+AENN
Sbjct: 125 SRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVSRLMMYQQGCFAGGTVLRVAKDLAENN 184
Query: 183 PGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVL 242
GARVL VC +IT + F P+E+ LD +VGQA+FGDGAAA I+G+DPD ++ ERPLFQ++
Sbjct: 185 RGARVLAVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDPDEAV-ERPLFQMV 243
Query: 243 SCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFY 302
S SQ +P++E + GHL+E+G + L KD+P +I K I++ L DA +P+GISDWNS+F+
Sbjct: 244 SASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALGDAFTPLGISDWNSIFW 303
Query: 303 IVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362
+ HPGG ILDQVE +GL KE++ A+R+ LSEYGN+ + VLFILD++RK+S E+ AT
Sbjct: 304 VAHPGGPAILDQVEAKVGLDKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHAT 363
Query: 363 TGEGLEYGVLFGFGPGITVETVVLRSIPIDS 393
TGEG+++GVLFGFGPG+TVETVVL S+PI +
Sbjct: 364 TGEGMDWGVLFGFGPGLTVETVVLHSVPITA 394
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|O23730|CHS4_BROFI Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/387 (62%), Positives = 302/387 (78%), Gaps = 2/387 (0%)
Query: 9 DVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRK 68
R+ GP+A +LAIGT+TPPN YQADYPD++FR+T SEH ELKEKF+R+C++S I+K
Sbjct: 10 QAQRAEGPAA-VLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKK 68
Query: 69 RYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHL 128
RY YLTEEILKENPN+ + APSLDAR +++ EVPKL KEAA++AIKEWG P S+ITHL
Sbjct: 69 RYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHL 128
Query: 129 IFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVL 188
IF G+DMPGAD +L LLGL PSVNR M+Y QGC+ GG V+R AKD+AENN GARVL
Sbjct: 129 IFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVL 188
Query: 189 VVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMT 248
VVC +IT + F P+E+ LD LVGQA+FGDGAAA I+G+DPD S ERPLFQ++S SQ
Sbjct: 189 VVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPD-SATERPLFQLVSASQTI 247
Query: 249 VPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGG 308
+P +E + GHL+E+G + L KD+P +I K I K L DA P+G+ DWNS+F+I HPGG
Sbjct: 248 LPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGG 307
Query: 309 KVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLE 368
ILDQVE LGL EKL ASR L+EYGN+ + VLFILD++R++S E +ATTGEGLE
Sbjct: 308 PAILDQVEIKLGLKAEKLAASRSVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLE 367
Query: 369 YGVLFGFGPGITVETVVLRSIPIDSAN 395
+GVLFGFGPG+TVET+VLRS+PI A
Sbjct: 368 WGVLFGFGPGLTVETIVLRSVPIAGAE 394
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Bromheadia finlaysoniana (taxid: 41205) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|O23729|CHS3_BROFI Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/387 (62%), Positives = 302/387 (78%), Gaps = 2/387 (0%)
Query: 9 DVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRK 68
R+ GP+A +LAIGT+TPPN YQADYPD++FR+T SEH ELKEKF+R+C++S I+K
Sbjct: 10 QAQRAEGPAA-VLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKK 68
Query: 69 RYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHL 128
RY YLTEEILKENPN+ + APSLDAR +++ EVPKL KEAA++AIKEWG P S+ITHL
Sbjct: 69 RYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHL 128
Query: 129 IFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVL 188
IF G+DMPGAD +L LLGL PSVNR M+Y QGC+ GG V+R AKD+AENN GARVL
Sbjct: 129 IFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVL 188
Query: 189 VVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMT 248
VVC +IT + F P+E+ LD LVGQA+FGDGAAA I+G+DPD S ERPLFQ++S SQ
Sbjct: 189 VVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPD-SATERPLFQLVSASQTI 247
Query: 249 VPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGG 308
+P +E + GHL+E+G + L KD+P +I K I K L DA P+G+ DWNS+F+I HPGG
Sbjct: 248 LPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGG 307
Query: 309 KVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLE 368
ILDQVE LGL EKL ASR L+EYGN+ + VLFILD++R++S E +ATTGEGLE
Sbjct: 308 PAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLE 367
Query: 369 YGVLFGFGPGITVETVVLRSIPIDSAN 395
+GVLFGFGPG+TVET+VLRS+PI A
Sbjct: 368 WGVLFGFGPGLTVETIVLRSVPIAGAE 394
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Bromheadia finlaysoniana (taxid: 41205) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P16107|CHSY_PETCR Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1 | Back alignment and function description |
|---|
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 246/380 (64%), Positives = 306/380 (80%), Gaps = 2/380 (0%)
Query: 11 HRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRY 70
R++GP A ILAIGTATP NC YQADYPD++FR+TNSEH +LK KF+R+CE+S IRKRY
Sbjct: 16 QRAQGP-ANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRMCEKSMIRKRY 74
Query: 71 FYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIF 130
++TEE LKENPN+ Y+APSLDAR +++ EVP+LGKEAA KAIKEWGQP SKITHLIF
Sbjct: 75 MHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAASKAIKEWGQPKSKITHLIF 134
Query: 131 GAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVV 190
GVDMPGAD +L LLGL PSV R M+Y QGC+ GG V+R AKD+AENN GARVLVV
Sbjct: 135 CTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGARVLVV 194
Query: 191 CCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250
C +IT + F P+++ LD LVGQA+FGDGAAA I+G+DPD+S+ ERPLFQ++S +Q +P
Sbjct: 195 CSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVILGSDPDLSV-ERPLFQLISAAQTILP 253
Query: 251 NTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKV 310
+++ + GHL+E+G + L KD+P +I K I+K L +A PIGISDWNSLF+I HPGG
Sbjct: 254 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSLFWIAHPGGPA 313
Query: 311 ILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYG 370
ILDQVE LGL +EK+ A+R LS+YGN+ + VLFILD++RKKS EE KATTGEGL++G
Sbjct: 314 ILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGEGLDWG 373
Query: 371 VLFGFGPGITVETVVLRSIP 390
VLFGFGPG+TVETVVL S+P
Sbjct: 374 VLFGFGPGLTVETVVLHSVP 393
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Petroselinum crispum (taxid: 4043) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|O23731|CHS8_BROFI Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/387 (62%), Positives = 301/387 (77%), Gaps = 2/387 (0%)
Query: 9 DVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRK 68
R+ GP+A +LAIGT+TPPN YQADYPD++FR+T SEH ELKEKF+R+C++S I+K
Sbjct: 10 QAQRAEGPAA-VLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKK 68
Query: 69 RYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHL 128
RY YLTEEILKENPN+ + APSLDAR +++ EVPKL KEAA +AIKEWG P S+ITHL
Sbjct: 69 RYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAARAIKEWGHPKSRITHL 128
Query: 129 IFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVL 188
IF G+DMPGAD +L LLGL PSVNR M+Y QGC+ GG V+R AKD+AENN GARVL
Sbjct: 129 IFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVL 188
Query: 189 VVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMT 248
VVC +IT + F P+E+ LD LVGQA+FGDGAAA I+G+DPD S ERPLFQ++S SQ
Sbjct: 189 VVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPD-SATERPLFQLVSASQTI 247
Query: 249 VPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGG 308
+P +E + GHL+E+G + L KD+P +I K I K L DA P+G+ DWNS+F+I HPGG
Sbjct: 248 LPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGG 307
Query: 309 KVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLE 368
ILDQVE LGL EKL ASR L+EYGN+ + VLFILD++R++S E +ATTGEGLE
Sbjct: 308 PAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLE 367
Query: 369 YGVLFGFGPGITVETVVLRSIPIDSAN 395
+GVLFGFGPG+TVET+VLRS+PI A
Sbjct: 368 WGVLFGFGPGLTVETIVLRSVPIAGAE 394
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Bromheadia finlaysoniana (taxid: 41205) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9FSB8|CHS2_RUTGR Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/391 (63%), Positives = 307/391 (78%), Gaps = 2/391 (0%)
Query: 3 TVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICE 62
TV+ R+ GP+A +LAIGTATP N QADYPD++FR+T SEH ELKEKF+R+C+
Sbjct: 5 TVEEIRKAQRADGPAA-VLAIGTATPANYVTQADYPDYYFRITKSEHMTELKEKFKRMCD 63
Query: 63 RSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPV 122
+S IRKRY YLTE+ILKENPNM Y APSLDAR +++ EVPKLGKEAA+KAIKEWGQP
Sbjct: 64 KSMIRKRYMYLTEDILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPK 123
Query: 123 SKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182
SKITHLIF GVDMPG D +L LLGL PSV R M+Y QGC+ GG V+R AKD+AENN
Sbjct: 124 SKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 183
Query: 183 PGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVL 242
GARVLVVC +IT + F P + LD LVGQA+FGDGAAA I+GADP+ S+ ERPL+Q++
Sbjct: 184 RGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPNESI-ERPLYQLV 242
Query: 243 SCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFY 302
S +Q +P+++ + GHL+E+G + L KD+P +I K I+K L +A PIGISDWNS+F+
Sbjct: 243 SAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSIFW 302
Query: 303 IVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362
I HPGG ILDQVE LGL +EKL A+R LSEYGN+ + VLFILD++RKK EE +AT
Sbjct: 303 IAHPGGPAILDQVEAKLGLKEEKLRATRQVLSEYGNMSSACVLFILDEMRKKCAEEGRAT 362
Query: 363 TGEGLEYGVLFGFGPGITVETVVLRSIPIDS 393
TGEGL++GVLFGFGPG+TVETVVLRS+PI++
Sbjct: 363 TGEGLDWGVLFGFGPGLTVETVVLRSVPINA 393
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Ruta graveolens (taxid: 37565) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 395 | ||||||
| 18376655 | 393 | chalcone synthase [Vitis vinifera] | 0.969 | 0.974 | 0.657 | 1e-147 | |
| 3288721 | 393 | chalcone synthase [Vitis vinifera] | 0.979 | 0.984 | 0.650 | 1e-147 | |
| 239949924 | 393 | CHS4 [Vitis labrusca x Vitis vinifera] | 0.994 | 1.0 | 0.640 | 1e-147 | |
| 225451637 | 393 | PREDICTED: chalcone synthase [Vitis vini | 0.994 | 1.0 | 0.640 | 1e-147 | |
| 171673164 | 391 | chalcone synthase [Citrus sinensis] | 0.989 | 1.0 | 0.638 | 1e-147 | |
| 223953610 | 393 | chalcone synthase [Vitis rotundifolia] | 0.994 | 1.0 | 0.637 | 1e-147 | |
| 444475577 | 393 | chalcone synthase [Lonicera japonica] | 0.977 | 0.982 | 0.652 | 1e-146 | |
| 228480555 | 391 | chalcone synthase [Citrus unshiu] | 0.989 | 1.0 | 0.638 | 1e-146 | |
| 375364633 | 389 | chalcone synthase [Acacia confusa] | 0.984 | 1.0 | 0.631 | 1e-146 | |
| 260402489 | 391 | chalcone synthase [Citrus maxima] | 0.989 | 1.0 | 0.636 | 1e-146 |
| >gi|18376655|dbj|BAB84112.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/385 (65%), Positives = 306/385 (79%), Gaps = 2/385 (0%)
Query: 11 HRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRY 70
R+ GP A +LAIGTATP NC YQADYPD++FR+TNSEH ELKEKF+R+CE+S I KRY
Sbjct: 11 QRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMINKRY 69
Query: 71 FYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIF 130
+LTEEILKENPN+ Y APSLDAR M++ EVPKLGKEAA+KAIKEWGQP SKITHL+F
Sbjct: 70 MHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVF 129
Query: 131 GAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVV 190
GVDMPGAD +L LLGL+PSV RLM+Y QGC+ GG V+R AKD+AENN GARVLVV
Sbjct: 130 CTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGARVLVV 189
Query: 191 CCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250
C +IT + F P++ LD LVGQA+FGDGAAA IIGADPD + ERPLF+++S +Q +P
Sbjct: 190 CSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPDTKI-ERPLFELVSAAQTILP 248
Query: 251 NTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKV 310
++E + GHL+E+G + L KD+P +I K I+K L +A PIGISDWNSLF+I HPGG
Sbjct: 249 DSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFKPIGISDWNSLFWIAHPGGPA 308
Query: 311 ILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYG 370
ILDQVE LGL +EKL A+R+ LSEYGN+ + VLFILD++RKKS EE K TTGEGLE+G
Sbjct: 309 ILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGTTGEGLEWG 368
Query: 371 VLFGFGPGITVETVVLRSIPIDSAN 395
VLFGFGPG+TVETVVL S+ S +
Sbjct: 369 VLFGFGPGLTVETVVLHSLATQSTH 393
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3288721|dbj|BAA31259.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/389 (65%), Positives = 309/389 (79%), Gaps = 2/389 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M +V R+ GP A +LAIGTATP NC YQADYPD++FR+TNSEH ELKEKF+R+
Sbjct: 1 MVSVAEIRKAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
CE+S I KRY +LTEEILKENPN+ Y APSLDAR M++ EVPKLGKEAA+KAIKEWGQ
Sbjct: 60 CEKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL+PSV RLM+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN G+RVLVVC +IT + F P++ LD LVGQA+FGDGAAA IIGADPD + ERPLF+
Sbjct: 180 NNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P++E + GHL+E+G + L KD+P +I K I+K L +A +PIGISDWNSL
Sbjct: 239 LVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSL 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL +EKL A+R+ LSEYGN+ + VLFILD++RKKS EE K
Sbjct: 299 FWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSI 389
A+TGEGLE+GVLFGFGPG+TVETVVL S+
Sbjct: 359 ASTGEGLEWGVLFGFGPGLTVETVVLHSV 387
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|239949924|gb|ACS36661.1| CHS4 [Vitis labrusca x Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/395 (64%), Positives = 312/395 (78%), Gaps = 2/395 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M +V R+ GP A +LAIGTATP NC YQADYPD++FR+TNSEH ELKEKF+R+
Sbjct: 1 MVSVAEIRKAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
CE+S I KRY +LTEEILKENPN+ Y APSLDAR M++ EVPKLGKEAA+KAIKEWGQ
Sbjct: 60 CEKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL+PSV RLM+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN G+RVLVVC +IT + F P++ LD LVGQA+FGDGAAA IIGADPD + ERPLF+
Sbjct: 180 NNAGSRVLVVCPEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P++E + GHL+E+G + L KD+P +I K I+K L +A +PIGISDWNSL
Sbjct: 239 LVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSL 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL +EKL A+R+ LSEYGN+ + VLFILD++RKKS EE K
Sbjct: 299 FWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDSAN 395
A+TGEGLE+GVLFGFGPG+T+ETVVL S+ +A+
Sbjct: 359 ASTGEGLEWGVLFGFGPGLTIETVVLHSVSAPAAH 393
|
Source: Vitis labrusca x Vitis vinifera Species: Vitis labrusca x Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451637|ref|XP_002276946.1| PREDICTED: chalcone synthase [Vitis vinifera] gi|122893266|gb|ABM67586.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/395 (64%), Positives = 310/395 (78%), Gaps = 2/395 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M +V R+ GP A +LAIGTATP NC YQADYPD++FR+TNSEH ELKEKF+R+
Sbjct: 1 MVSVAEIRKAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
CE+S I KRY +LTEEILKENPN+ Y APSLDAR M++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CEKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL+PSV RLM+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN G+RVLVVC +IT + F P++ LD LVGQA+FGDGAAA IIGADPD + ERPLF+
Sbjct: 180 NNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P++E + GHL+E+G + L KD+P +I K I+K L +A +PIGISDWNSL
Sbjct: 239 LVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSL 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL +EKL A+R+ LSEYGN+ + VLFILD++RKKS EE K
Sbjct: 299 FWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDSAN 395
+TGEGLE+GVLFGFGPG+TVETVVL S+ +A+
Sbjct: 359 GSTGEGLEWGVLFGFGPGLTVETVVLHSVSAPAAH 393
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|171673164|gb|ACB47461.1| chalcone synthase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 251/393 (63%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M TV+ + R+ GP A +LAIGTATP + QADYPD++FR+T SEH ELKEKF+R+
Sbjct: 1 MATVQEIRNAQRADGP-ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S I+KRY YLTEEILKENPNM Y APSLDAR +++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHLIF GVDMPGAD +L LLGL PSV R M+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN GARVLVVC +IT + F P + LD LVGQA+FGDGAAA I+GADPD S+ ERPL+Q
Sbjct: 180 NNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLYQ 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S SQ +P+++ + GHL+E+G + L KD+P +I K I+K L++A +P+GISDWNS+
Sbjct: 239 LVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSI 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL +EKL A+R LSEYGN+ + VLFILD++RKKS EE K
Sbjct: 299 FWIAHPGGPAILDQVESKLGLKEEKLKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDS 393
ATTGEGL++GVLFGFGPG+TVETVVL S+PI +
Sbjct: 359 ATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 391
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223953610|gb|ACN30003.1| chalcone synthase [Vitis rotundifolia] | Back alignment and taxonomy information |
|---|
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/395 (63%), Positives = 311/395 (78%), Gaps = 2/395 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M TV + R+ GP A ++AIGTATPPNC Q+ YPD++FR+TNSEHK ELKEKF+R+
Sbjct: 1 MVTVNEVRNAQRAEGP-ATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S I+KRY +LTEEILKENPN+ Y APSLDAR M++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CDKSMIKKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL+PSV RLM+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN GARVLVVC +IT + F P++ LD LVGQA+FGDGAAA IIGADPD + ERPLF+
Sbjct: 180 NNAGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPDTKI-ERPLFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P+++ + GHL+E+G + L KD+P +I K I+K L +A +PIGISDWNSL
Sbjct: 239 LVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFNPIGISDWNSL 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL +EKL A+R+ LSEYGN+ + VLFILD++RKKS EE K
Sbjct: 299 FWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDSAN 395
TTGEGLE+GVLFGFGPG+TVETVVL S+ S +
Sbjct: 359 GTTGEGLEWGVLFGFGPGLTVETVVLHSLATQSTH 393
|
Source: Vitis rotundifolia Species: Vitis rotundifolia Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|444475577|gb|AGE10597.1| chalcone synthase [Lonicera japonica] | Back alignment and taxonomy information |
|---|
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/388 (65%), Positives = 308/388 (79%), Gaps = 2/388 (0%)
Query: 3 TVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICE 62
TV+ R++GP A +LAIGTATP NC YQADYPDF+FR+T SEHK ELKEKF+R+CE
Sbjct: 5 TVEEIRKAQRAQGP-ATVLAIGTATPANCVYQADYPDFYFRITKSEHKAELKEKFKRMCE 63
Query: 63 RSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPV 122
+S IRKRY +L EEILKENP + Y APSLDAR M++ EVPKLGKEAA KAIKEWGQP
Sbjct: 64 KSMIRKRYMHLNEEILKENPGICEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPK 123
Query: 123 SKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182
SKITHL+F GVDMPGAD +L LLGL PSV RLM+Y QGC+ GG V+R AKD+AENN
Sbjct: 124 SKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENN 183
Query: 183 PGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVL 242
GARVLVVC +IT + F P++ LD LVGQA+FGDGAAA IIGADPD S+ ERPLF+++
Sbjct: 184 AGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDKSV-ERPLFELV 242
Query: 243 SCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFY 302
S +Q +P+++ + GHL+E+G + L KD+P +I K I+K L +A +PIGI+DWNSLF+
Sbjct: 243 SAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFAPIGITDWNSLFW 302
Query: 303 IVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362
I HPGG ILDQVE LGL +EKL +R+ LSEYGN+ + VLFILD++RKKS EE KAT
Sbjct: 303 IAHPGGPAILDQVEIKLGLKEEKLRPTRHVLSEYGNMSSACVLFILDELRKKSIEEGKAT 362
Query: 363 TGEGLEYGVLFGFGPGITVETVVLRSIP 390
TG+GLE+GVLFGFGPG+TVETVVL S+P
Sbjct: 363 TGDGLEWGVLFGFGPGLTVETVVLHSVP 390
|
Source: Lonicera japonica Species: Lonicera japonica Genus: Lonicera Family: Caprifoliaceae Order: Dipsacales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|228480555|gb|ACQ41890.1| chalcone synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 251/393 (63%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M TV+ + R+ GP A +LAIGTATP + QADYPD++FR+T SEH ELKEKF+R+
Sbjct: 1 MATVQEIRNAQRADGP-ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S I+KRY YLTEEILKENPNM Y APSLDAR +++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHLIF GVDMPGAD +L LLGL PSV R M+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN GARVLVVC +IT + F P + LD LVGQA+FGDGAAA I+GADPD S+ ERPL+Q
Sbjct: 180 NNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLYQ 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S SQ +P+++ + GHL+E+G + L KD+P +I K I+K L++A +P+GISDWNS+
Sbjct: 239 LVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSI 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL +EKL A+R LSEYGN+ + VLFILD++RKKS EE K
Sbjct: 299 FWIAHPGGPAILDQVESKLGLKEEKLKATRQVLSEYGNMPSACVLFILDEMRKKSAEEAK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDS 393
ATTGEGL++GVLFGFGPG+TVETVVL S+PI +
Sbjct: 359 ATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 391
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375364633|gb|AFA55180.1| chalcone synthase [Acacia confusa] | Back alignment and taxonomy information |
|---|
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/391 (63%), Positives = 311/391 (79%), Gaps = 2/391 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M TV+ + RSRGP A ILA GTATP NC QADYPD++FR+T SEH +LKEKF+R+
Sbjct: 1 MVTVEEIRNAQRSRGP-ATILAFGTATPSNCVLQADYPDYYFRITQSEHMTDLKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
CE+S I+KRY +LTEE+LKENPNM Y APSLDAR M++ EVPKLGKEAA+KAIKEWGQ
Sbjct: 60 CEKSMIKKRYMHLTEELLKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL PSV RLM+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN GARVLVVC +IT + F P++ LD LVGQA+FGDGAAA IIGADPD S+ ERP+F+
Sbjct: 180 NNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPDTSV-ERPIFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P+++ + GHL+E+G + L KD+P II K I+K L +A +PIGI+DWNS+
Sbjct: 239 MVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFTPIGINDWNSI 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F++ HPGG ILDQVE LGL +EKL +R+ LSEYG++ + V+FILD++R++S +E K
Sbjct: 299 FWVAHPGGPAILDQVEAKLGLKEEKLATTRHILSEYGDMSSACVIFILDELRRRSVKEGK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391
ATTGEGLE+GVLFGFGPG+TVETVVL S+P+
Sbjct: 359 ATTGEGLEWGVLFGFGPGLTVETVVLHSVPV 389
|
Source: Acacia confusa Species: Acacia confusa Genus: Acacia Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|260402489|gb|ACX37403.1| chalcone synthase [Citrus maxima] | Back alignment and taxonomy information |
|---|
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/393 (63%), Positives = 309/393 (78%), Gaps = 2/393 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M TV+ + R+ GP A +LAIGTATP + QADYPD++FR+T SEH ELKEKF+R+
Sbjct: 1 MATVQEIRNAQRADGP-ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S I+KRY YLTEEILKENPNM Y APSLDAR +++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHLIF GVDMPGAD +L LLGL PSV R M+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN GARVLVVC +IT + F P + LD LVGQA+FGDGAAA I+GADPD S+ ERPL+Q
Sbjct: 180 NNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLYQ 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S SQ +P+++ + GHL+E+G + L KD+P +I K I+K L++A +P+GISDW+S+
Sbjct: 239 LVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWSSI 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE LGL +EKL A+R LSEYGN+ + VLFILD++RKKS EE K
Sbjct: 299 FWIAHPGGPAILDQVESKLGLKEEKLKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAK 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDS 393
ATTGEGL++GVLFGFGPG+TVETVVL S+PI +
Sbjct: 359 ATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 391
|
Source: Citrus maxima Species: Citrus maxima Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 395 | ||||||
| UNIPROTKB|Q9FUB7 | 390 | Q9FUB7 "Chalcone synthase" [Hy | 0.987 | 1.0 | 0.586 | 3.1e-122 | |
| UNIPROTKB|Q8RVK9 | 389 | CHS "Naringenin-chalcone synth | 0.984 | 1.0 | 0.588 | 2.8e-121 | |
| TAIR|locus:2159098 | 395 | TT4 "TRANSPARENT TESTA 4" [Ara | 0.959 | 0.959 | 0.584 | 7.7e-119 | |
| UNIPROTKB|P30074 | 389 | CHS2 "Chalcone synthase 2" [Me | 0.984 | 1.0 | 0.572 | 7.9e-117 | |
| UNIPROTKB|Q27Z07 | 390 | BIS "Biphenyl synthase" [Sorbu | 0.936 | 0.948 | 0.595 | 8.2e-115 | |
| UNIPROTKB|D2DRC4 | 390 | BIS2 "Biphenyl synthase 2" [So | 0.936 | 0.948 | 0.597 | 1.3e-114 | |
| UNIPROTKB|D2DRC5 | 388 | BIS3 "Biphenyl synthase 3" [So | 0.936 | 0.953 | 0.573 | 2e-111 | |
| UNIPROTKB|Q8SAS8 | 395 | Q8SAS8 "Trihydroxybenzophenone | 0.946 | 0.946 | 0.537 | 6.5e-106 | |
| UNIPROTKB|Q8LIL0 | 402 | LOC_Os07g17010 "Curcuminoid sy | 0.954 | 0.937 | 0.423 | 5.4e-79 | |
| TAIR|locus:2116845 | 392 | LAP5 "LESS ADHESIVE POLLEN 5" | 0.982 | 0.989 | 0.331 | 1.5e-58 |
| UNIPROTKB|Q9FUB7 Q9FUB7 "Chalcone synthase" [Hypericum androsaemum (taxid:140968)] | Back alignment and assigned GO terms |
|---|
Score = 1202 (428.2 bits), Expect = 3.1e-122, P = 3.1e-122
Identities = 230/392 (58%), Positives = 289/392 (73%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M TV+ R+ GP A ++AIGTA PPNC QA YPD++FR+TNSEHK ELKEKF+R+
Sbjct: 1 MVTVEEVRKAQRAEGP-ATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S I+KRY YL EE+LKENPNM Y APSLDAR +++ EVPKLGKEAA+KAIKEWGQ
Sbjct: 60 CDKSQIKKRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL PSV RLM+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPLFQ 240
NN GARVLVVC +IT + F PT+ LD LVGQ + E+PLF+
Sbjct: 180 NNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAIIIGSDPIPEV-EKPLFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P++E + GHL+E+G + L KD+P +I K ++K L +A P+GISDWNSL
Sbjct: 239 LVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSL 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE L L EKL A+R+ LSEYGN+ + VLFILD++R+KS E+
Sbjct: 299 FWIAHPGGPAILDQVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGL 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPID 392
TTGEG+E+GVLFGFGPG+TVETVVL S+ I+
Sbjct: 359 KTTGEGIEWGVLFGFGPGLTVETVVLHSVAIN 390
|
|
| UNIPROTKB|Q8RVK9 CHS "Naringenin-chalcone synthase" [Cannabis sativa (taxid:3483)] | Back alignment and assigned GO terms |
|---|
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 230/391 (58%), Positives = 288/391 (73%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M TV+ R+ GP A I+AIGTATP NC Q++YPD++FR+TNSEHK ELKEKF+R+
Sbjct: 1 MVTVEEFRKAQRAEGP-ATIMAIGTATPANCVLQSEYPDYYFRITNSEHKTELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S IRKRY +LTEEILKENPN+ Y+APSLDAR M++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CDKSMIRKRYMHLTEEILKENPNLCAYEAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL PSV RLM+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPLFQ 240
NN GARVLVVC +IT + F P + LD LVGQ + E+P+F+
Sbjct: 180 NNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGSAALIVGSDPIPEV-EKPIFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P+++ + GHL+E+G + L KD+P +I K I+K L +A P+GISDWNSL
Sbjct: 239 LVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLNEAFKPLGISDWNSL 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE L L EKL A+R+ LSEYGN+ + VLFILD++R+K E+
Sbjct: 299 FWIAHPGGPAILDQVESKLALKTEKLRATRHVLSEYGNMSSACVLFILDEMRRKCVEDGL 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391
TTGEGLE+GVLFGFGPG+TVETVVL S+ I
Sbjct: 359 NTTGEGLEWGVLFGFGPGLTVETVVLHSVAI 389
|
|
| TAIR|locus:2159098 TT4 "TRANSPARENT TESTA 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1170 (416.9 bits), Expect = 7.7e-119, P = 7.7e-119
Identities = 222/380 (58%), Positives = 286/380 (75%)
Query: 12 RSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYF 71
R+ GP A ILAIGTA P N QA+YPD++FR+TNSEH +LKEKF+R+C++S+IRKR+
Sbjct: 17 RADGP-AGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHM 75
Query: 72 YLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFG 131
+LTEE LKENP+M Y APSLD R +++ EVPKLGKEAA+KAIKEWGQP SKITH++F
Sbjct: 76 HLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFC 135
Query: 132 AVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVC 191
GVDMPGAD +L LLGL PSV RLM+Y QGC+ GG V+R AKD+AENN GARVLVVC
Sbjct: 136 TTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRGARVLVVC 195
Query: 192 CDITVLHFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPLFQVLSCSQMTVPN 251
+IT + F P++ LD LVGQ S+ E+P+F+++S +Q +P+
Sbjct: 196 SEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTILPD 255
Query: 252 TENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKVI 311
++ + GHL+E+G + L KD+P +I K I K L +A P+GISDWNSLF+I HPGG I
Sbjct: 256 SDGAIDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLFWIAHPGGPAI 315
Query: 312 LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGV 371
LDQVE LGL +EK+ A+R+ LSEYGN+ + VLFILD++R+KS ++ ATTGEGLE+GV
Sbjct: 316 LDQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDGVATTGEGLEWGV 375
Query: 372 LFGFGPGITVETVVLRSIPI 391
LFGFGPG+TVETVVL S+P+
Sbjct: 376 LFGFGPGLTVETVVLHSVPL 395
|
|
| UNIPROTKB|P30074 CHS2 "Chalcone synthase 2" [Medicago sativa (taxid:3879)] | Back alignment and assigned GO terms |
|---|
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 224/391 (57%), Positives = 281/391 (71%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M +V R+ GP A ILAIGTA P NC Q+ YPDF+F++TNSEHK ELKEKF+R+
Sbjct: 1 MVSVSEIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S I++RY YLTEEILKENPN+ Y APSLDAR M++ EVP+LGKEAA+KAIKEWGQ
Sbjct: 60 CDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHLI GVDMPGAD +L LLGL P V R M+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPLFQ 240
NN GARVLVVC ++T + F P++ LD LVGQ + E+P+F+
Sbjct: 180 NNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEI-EKPIFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++ +Q P++E + GHL+E G + L KD+P I+ K I K L +A P+GISD+NS+
Sbjct: 239 MVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSI 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVEQ L L EK+ A+R LSEYGN+ + VLFILD++RKKST+
Sbjct: 299 FWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGL 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391
TTGEGLE+GVLFGFGPG+T+ETVVLRS+ I
Sbjct: 359 KTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
|
|
| UNIPROTKB|Q27Z07 BIS "Biphenyl synthase" [Sorbus aucuparia (taxid:36599)] | Back alignment and assigned GO terms |
|---|
Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
Identities = 222/373 (59%), Positives = 271/373 (72%)
Query: 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEI 77
AKILAIGTA PPN +YQ DYPDF FRVT +EH+ +L+EKF RICE+S RKRY +LTEEI
Sbjct: 14 AKILAIGTANPPNVYYQKDYPDFLFRVTKNEHRTDLREKFDRICEKSRTRKRYLHLTEEI 73
Query: 78 LKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD 137
LK NP++ Y APSLD R ML EVPKLG++AALKAIKEWGQP+SKITHLIF VD
Sbjct: 74 LKANPSIYTYGAPSLDVRQDMLNSEVPKLGQQAALKAIKEWGQPISKITHLIFCTASCVD 133
Query: 138 MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVL 197
MPGAD +L+ LLGL PSV R MIY GCY G V+R AKD AENN GARVLVVC +IT +
Sbjct: 134 MPGADFQLVKLLGLNPSVTRTMIYEAGCYAGATVLRLAKDFAENNEGARVLVVCAEITTV 193
Query: 198 HFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPLFQVLSCSQMTVPNTENNVV 257
FH T+ LD+LVGQ + ERPLF++++C Q +PN+E+ VV
Sbjct: 194 FFHGLTDTHLDILVGQALFADGASAVIVGANPEPKI-ERPLFEIVACRQTIIPNSEHGVV 252
Query: 258 GHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPI-GIS-DWNSLFYIVHPGGKVILDQV 315
+++EMG+ Y LS ++P +G + L + G + DWNSLF+ VHPGG I+DQV
Sbjct: 253 ANIREMGFTYYLSGEVPKFVGGNVVDFLTKTFEKVDGKNKDWNSLFFSVHPGGPAIVDQV 312
Query: 316 EQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGF 375
E+ LGL + KL A+R+ LSEYGN+GAPSV FILDD+RKKS EE K+TTGEGLE+GV+ G
Sbjct: 313 EEQLGLKEGKLRATRHVLSEYGNMGAPSVHFILDDMRKKSIEEGKSTTGEGLEWGVVIGI 372
Query: 376 GPGITVETVVLRS 388
GPG+TVET VLRS
Sbjct: 373 GPGLTVETAVLRS 385
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| UNIPROTKB|D2DRC4 BIS2 "Biphenyl synthase 2" [Sorbus aucuparia (taxid:36599)] | Back alignment and assigned GO terms |
|---|
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 223/373 (59%), Positives = 270/373 (72%)
Query: 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEI 77
AKILAIGTA PPN +YQ DYPDF FRVT +EH+ +L+EKF RICE+S RKRY YLTEEI
Sbjct: 14 AKILAIGTANPPNVYYQEDYPDFLFRVTKNEHRTDLREKFDRICEKSRTRKRYLYLTEEI 73
Query: 78 LKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD 137
LK NP + Y APSLD R ML EVPKLG+EAALKAIKEWGQP+SKITHLIF VD
Sbjct: 74 LKANPCIYTYGAPSLDVRQDMLNPEVPKLGQEAALKAIKEWGQPISKITHLIFCTASCVD 133
Query: 138 MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVL 197
MPGAD +L+ LLGL PSV R MIY GCY G V+R AKD AENN GARVLVVC +IT +
Sbjct: 134 MPGADFQLVKLLGLNPSVTRTMIYEAGCYAGATVLRLAKDFAENNEGARVLVVCAEITTV 193
Query: 198 HFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPLFQVLSCSQMTVPNTENNVV 257
FH T+ LD+LVGQ + E PLF++++C Q +PN+E+ VV
Sbjct: 194 FFHGLTDTHLDILVGQALFADGASAVIVGANPEPEI-ESPLFEIVACRQTIIPNSEHGVV 252
Query: 258 GHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPI-GIS-DWNSLFYIVHPGGKVILDQV 315
+++EMG++Y LS ++P +G + L + G + DWNSLF+ VHPGG I+DQV
Sbjct: 253 ANIREMGFNYYLSGEVPKFVGGNVVDFLTKTFEKVDGKNKDWNSLFFSVHPGGPAIVDQV 312
Query: 316 EQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGF 375
E+ LGL + KL A+R+ LSEYGN+GAPSV FILD++RKKS EE KATTGEGLE+GV+ G
Sbjct: 313 EEQLGLKEGKLRATRHVLSEYGNMGAPSVHFILDEMRKKSIEEGKATTGEGLEWGVVIGI 372
Query: 376 GPGITVETVVLRS 388
GPG+TVET VLRS
Sbjct: 373 GPGLTVETAVLRS 385
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| UNIPROTKB|D2DRC5 BIS3 "Biphenyl synthase 3" [Sorbus aucuparia (taxid:36599)] | Back alignment and assigned GO terms |
|---|
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 214/373 (57%), Positives = 269/373 (72%)
Query: 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEI 77
AKILAIGTA PPN F+Q DYPDF FRVT +EH+ +L+EKF RICE+S +KRY +LTEE+
Sbjct: 12 AKILAIGTANPPNVFHQKDYPDFLFRVTKNEHRTDLREKFDRICEKSRTKKRYLHLTEEM 71
Query: 78 LKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD 137
LK NPN+ Y APSL+ R + EVPKLG+EA+LKAIKEWGQP+SKITHLIF VD
Sbjct: 72 LKANPNIYTYGAPSLNVRQDICNIEVPKLGQEASLKAIKEWGQPISKITHLIFCTASCVD 131
Query: 138 MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVL 197
MPG D +L+ LLGL+PSV R MIY GCY G V+R AKD AENN GARVLVVC +IT +
Sbjct: 132 MPGCDFQLIKLLGLDPSVTRTMIYEAGCYAGATVLRMAKDFAENNKGARVLVVCAEITTV 191
Query: 198 HFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPLFQVLSCSQMTVPNTENNVV 257
FH T+ LD+LVGQ + ERPLF++++C Q +PN+E+ VV
Sbjct: 192 FFHGLTDTHLDILVGQALFADGASAVIVGANPEPEI-ERPLFEIVACRQTILPNSEHGVV 250
Query: 258 GHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPI-GIS-DWNSLFYIVHPGGKVILDQV 315
+++EMG++Y LS D+P +G + + + G + DWNSLF+ VHPGG I+DQV
Sbjct: 251 ANIREMGFNYYLSGDVPKFVGGNVVDFMTKTFEKVDGKNKDWNSLFFSVHPGGPAIVDQV 310
Query: 316 EQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGF 375
E+ LGL + KL A+R+ LSEYGN+GAP+V FILD++R KS EE K TTGEGLE+GV+ G
Sbjct: 311 EEKLGLKEGKLRATRHVLSEYGNMGAPTVHFILDEMRNKSIEEGKTTTGEGLEWGVVIGI 370
Query: 376 GPGITVETVVLRS 388
GPG+TVET VLRS
Sbjct: 371 GPGLTVETAVLRS 383
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| UNIPROTKB|Q8SAS8 Q8SAS8 "Trihydroxybenzophenone synthase" [Hypericum androsaemum (taxid:140968)] | Back alignment and assigned GO terms |
|---|
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 201/374 (53%), Positives = 257/374 (68%)
Query: 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEI 77
A +LAIGT P + Q DYPDF+FR TNSEH ELKEKF+RIC +S IRKR+FYLTEEI
Sbjct: 20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRHFYLTEEI 79
Query: 78 LKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD 137
LKEN ++ Y A SLDAR +L EVPKLG+EAALKAI EWGQP+SKITH++F G
Sbjct: 80 LKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVFATTSGFM 139
Query: 138 MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVL 197
MPGAD + LLGL +V R+M+Y+QGC+ GG +R AKD+AENN GARVLVVC + T +
Sbjct: 140 MPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAENNEGARVLVVCAENTAM 199
Query: 198 HFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPLFQVLSCSQMTVPNTENNVV 257
FH P E+ LD++VGQ V+ ER +F +LS SQ VP ++ +
Sbjct: 200 TFHAPNESHLDVIVGQAMFSDGAAALIIGACPDVASGERAVFNILSASQTIVPGSDGAIT 259
Query: 258 GHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKVILDQVEQ 317
H EMG Y L +D+ + I ++ +A SP+G+SDWNSLFY +HPGG+ I+D V
Sbjct: 260 AHFYEMGMSYFLKEDVIPLFRDNIAAVMEEAFSPLGVSDWNSLFYSIHPGGRGIIDGVAG 319
Query: 318 NLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGP 377
NLG+ E L A+R+ L EYGN+G+ V+FILD++RK S K TTG+G E+G L G GP
Sbjct: 320 NLGIKDENLVATRHVLGEYGNMGSACVMFILDELRKSSKVNGKPTTGDGKEFGCLIGLGP 379
Query: 378 GITVETVVLRSIPI 391
G+TVE VVL+S+PI
Sbjct: 380 GLTVEAVVLQSVPI 393
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| UNIPROTKB|Q8LIL0 LOC_Os07g17010 "Curcuminoid synthase" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 164/387 (42%), Positives = 234/387 (60%)
Query: 8 GDVHRSRGPS--AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSS 65
G++ RS+ A +LAIGTA PPNC Q ++PDF+FRVTNS+H LK+KF+RIC+
Sbjct: 15 GEMRRSQRADGLAAVLAIGTANPPNCVTQEEFPDFYFRVTNSDHLTALKDKFKRICQEMG 74
Query: 66 IRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKI 125
+++RY + TEE+L +P APSLDAR + + VP+L EAA KAI EWG+P + I
Sbjct: 75 VQRRYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADI 134
Query: 126 THLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGA 185
THL+ G +PG D RL+ LLGL PSV R M++ GC+ G A +R AKD+AEN+ GA
Sbjct: 135 THLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGA 194
Query: 186 RVLVVCCDITVLHFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPLFQVLSCS 245
RVLVV ++T+++F P E L+ Q ERPLF+++S +
Sbjct: 195 RVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDV--ERPLFEIVSAA 252
Query: 246 QMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPI----GISDWNSLF 301
Q +P +++ + E D L + +P +IG +++ L D P+ G WN LF
Sbjct: 253 QTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLF 312
Query: 302 YIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKA 361
+ VHPG I+DQV+ LGL KL ASR LS+YGN+ +V+F LD++R++ E A
Sbjct: 313 WAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEA--A 370
Query: 362 TTGEGLEYGVLFGFGPGITVETVVLRS 388
GE E GV+ FGPG+TV+ ++L +
Sbjct: 371 AAGEWPELGVMMAFGPGMTVDAMLLHA 397
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| TAIR|locus:2116845 LAP5 "LESS ADHESIVE POLLEN 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 131/395 (33%), Positives = 221/395 (55%)
Query: 1 MGTVKSN--GDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFR 58
MG++ + G +S A ILA+G A P Q D +F+ T + ELK+K
Sbjct: 1 MGSIDAAVLGSEKKSNPGKATILALGKAFPHQLVMQEYLVDGYFKTTKCDDP-ELKQKLT 59
Query: 59 RICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEW 118
R+C+ ++++ RY ++EEILK+ P ++ ++ R + + V ++ EA+ IK W
Sbjct: 60 RLCKTTTVKTRYVVMSEEILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNW 119
Query: 119 GQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDI 178
G+ +S ITH+++ + +PG D+ L LGL P +R+++Y GC G A +R AKDI
Sbjct: 120 GRSISDITHVVYVSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDI 179
Query: 179 AENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQXXXXXXXXXXXXXXXXXVSLNERPL 238
AENNPG+RVL+ + T++ F P+ R LVG + E+PL
Sbjct: 180 AENNPGSRVLLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPD-PICEKPL 238
Query: 239 FQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGIS--D 296
F++ + Q +P TE + G L E G ++ LS++LP II ++ + G++ +
Sbjct: 239 FELHTAIQNFLPETEKTIDGRLTEQGINFKLSRELPQIIEDNVENFCKKLIGKAGLAHKN 298
Query: 297 WNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKST 356
+N +F+ VHPGG IL+++E+ L L EKL SR AL +YGN + S++++L+ + ++S
Sbjct: 299 YNQMFWAVHPGGPAILNRIEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEESK 358
Query: 357 EERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391
+ R E E+G++ FGPG+T E ++ R++ +
Sbjct: 359 KVRNMNEEEN-EWGLILAFGPGVTFEGIIARNLDV 392
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9XGX2 | CHS1_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6112 | 0.9848 | 0.9700 | N/A | no |
| Q9XGX1 | CHS7_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6122 | 0.9873 | 0.975 | N/A | no |
| P51090 | CHSY_VITVI | 2, ., 3, ., 1, ., 7, 4 | 0.6379 | 0.9949 | 1.0 | yes | no |
| Q9LKP7 | CHSY_DIAMO | 2, ., 3, ., 1, ., 7, 4 | 0.6198 | 0.9873 | 0.9974 | N/A | no |
| Q41436 | CHSA_SOLTU | 2, ., 3, ., 1, ., 7, 4 | 0.6323 | 0.9797 | 0.9948 | N/A | no |
| P51075 | CHSY_BETPN | 2, ., 3, ., 1, ., 7, 4 | 0.6342 | 0.9848 | 0.9848 | N/A | no |
| Q9ZS40 | CHS2_DAUCA | 2, ., 3, ., 1, ., 7, 4 | 0.6421 | 0.9569 | 0.9521 | N/A | no |
| Q9SBL7 | CHS2_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6163 | 0.9848 | 0.9700 | N/A | no |
| Q9SBL6 | CHS3_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6138 | 0.9848 | 0.9700 | N/A | no |
| Q9SBL5 | CHS4_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6138 | 0.9848 | 0.9700 | N/A | no |
| Q9SBL4 | CHS5_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6138 | 0.9848 | 0.9700 | N/A | no |
| Q9SBL3 | CHS6_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6138 | 0.9848 | 0.9700 | N/A | no |
| O04220 | CHSY_CHRAE | 2, ., 3, ., 1, ., 7, 4 | 0.6227 | 0.9721 | 0.9696 | N/A | no |
| Q9ZRR8 | CHS1_CASGL | 2, ., 3, ., 1, ., 7, 4 | 0.6298 | 0.9797 | 0.9948 | N/A | no |
| P48392 | CHS3_GERHY | 2, ., 3, ., 1, ., 7, 4 | 0.6382 | 0.9746 | 0.9553 | N/A | no |
| O04111 | CHSY_PERFR | 2, ., 3, ., 1, ., 7, 4 | 0.6132 | 0.9898 | 1.0 | N/A | no |
| P48390 | CHS1_GERHY | 2, ., 3, ., 1, ., 7, 4 | 0.6253 | 0.9746 | 0.9673 | N/A | no |
| P06515 | CHSY_ANTMA | 2, ., 3, ., 1, ., 7, 4 | 0.6071 | 0.9873 | 1.0 | N/A | no |
| O23729 | CHS3_BROFI | 2, ., 3, ., 1, ., 7, 4 | 0.6279 | 0.9746 | 0.9771 | N/A | no |
| Q43163 | CHSB_SOLTU | 2, ., 3, ., 1, ., 7, 4 | 0.6323 | 0.9797 | 0.9948 | N/A | no |
| A2ZEX7 | CHS1_ORYSI | 2, ., 3, ., 1, ., 7, 4 | 0.6138 | 0.9848 | 0.9773 | N/A | no |
| O22652 | CHSY_RAPSA | 2, ., 3, ., 1, ., 7, 4 | 0.6065 | 0.9873 | 0.9898 | N/A | no |
| P53414 | CHS1_SECCE | 2, ., 3, ., 1, ., 7, 4 | 0.6035 | 0.9797 | 0.9872 | N/A | no |
| P48389 | CHSY_DIACA | 2, ., 3, ., 1, ., 7, 4 | 0.6147 | 0.9873 | 0.9974 | N/A | no |
| Q9FSB9 | CHS1_RUTGR | 2, ., 3, ., 1, ., 7, 4 | 0.6317 | 0.9848 | 0.9898 | N/A | no |
| Q9FSB8 | CHS2_RUTGR | 2, ., 3, ., 1, ., 7, 4 | 0.6342 | 0.9848 | 0.9898 | N/A | no |
| P26018 | CHS1_HORVU | 2, ., 3, ., 1, ., 7, 4 | 0.6086 | 0.9848 | 0.9773 | N/A | no |
| Q9FUB7 | CHSY_HYPAN | 2, ., 3, ., 1, ., 7, 4 | 0.6198 | 0.9873 | 1.0 | N/A | no |
| Q8RVK9 | CHS_CANSA | 2, ., 3, ., 1, ., 7, 4 | 0.6163 | 0.9848 | 1.0 | N/A | no |
| Q9SEP2 | CHSY_CARAN | 2, ., 3, ., 1, ., 7, 4 | 0.6167 | 0.9620 | 0.9620 | N/A | no |
| P24825 | CHS2_MAIZE | 2, ., 3, ., 1, ., 7, 4 | 0.6138 | 0.9848 | 0.9725 | N/A | no |
| P16107 | CHSY_PETCR | 2, ., 3, ., 1, ., 7, 4 | 0.6473 | 0.9569 | 0.9497 | N/A | no |
| P53415 | CHS2_SECCE | 2, ., 3, ., 1, ., 7, 4 | 0.6086 | 0.9848 | 0.9873 | N/A | no |
| P48388 | CHS3_CAMSI | 2, ., 3, ., 1, ., 7, 4 | 0.6298 | 0.9797 | 0.9948 | N/A | no |
| P13417 | CHS3_SINAL | 2, ., 3, ., 1, ., 7, 4 | 0.6065 | 0.9873 | 0.9873 | N/A | no |
| P13416 | CHS1_SINAL | 2, ., 3, ., 1, ., 7, 4 | 0.6040 | 0.9873 | 0.9873 | N/A | no |
| P17818 | CHSY_MATIN | 2, ., 3, ., 1, ., 7, 4 | 0.6194 | 0.9620 | 0.9644 | N/A | no |
| P48385 | CHSY_CALCH | 2, ., 3, ., 1, ., 7, 4 | 0.6295 | 0.9721 | 0.9648 | N/A | no |
| P48387 | CHS2_CAMSI | 2, ., 3, ., 1, ., 7, 4 | 0.6169 | 0.9797 | 0.9948 | N/A | no |
| P48386 | CHS1_CAMSI | 2, ., 3, ., 1, ., 7, 4 | 0.6272 | 0.9797 | 0.9948 | N/A | no |
| Q2R3A1 | CHS1_ORYSJ | 2, ., 3, ., 1, ., 7, 4 | 0.6163 | 0.9848 | 0.9773 | yes | no |
| O22047 | CHSE_IPOPU | 2, ., 3, ., 1, ., 7, 4 | 0.6298 | 0.9797 | 0.9948 | N/A | no |
| O22046 | CHSE_IPONI | 2, ., 3, ., 1, ., 7, 4 | 0.6323 | 0.9797 | 0.9948 | N/A | no |
| O23730 | CHS4_BROFI | 2, ., 3, ., 1, ., 7, 4 | 0.6279 | 0.9746 | 0.9771 | N/A | no |
| O23731 | CHS8_BROFI | 2, ., 3, ., 1, ., 7, 4 | 0.6279 | 0.9746 | 0.9771 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | gVvCHS1 | RecName- Full=Chalcone synthase; EC=2.3.1.74; AltName- Full=Naringenin-chalcone synthase;; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin (By similarity) (393 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | MYBA1 | SubName- Full=Chromosome chr2 scaffold_97, whole genome shotgun sequence; (174 aa) | • | 0.483 | |||||||
 | F3H | RecName- Full=Naringenin,2-oxoglutarate 3-dioxygenase; EC=1.14.11.9; AltName- Full=Flavonone-3- [...] (363 aa) | • | 0.483 | |||||||
 | GSVIVG00024561001 | SubName- Full=Putative uncharacterized protein (Chromosome chr6 scaffold_3, whole genome shotgu [...] (717 aa) | • | 0.483 | |||||||
 | GSVIVG00023211001 | SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (710 aa) | • | 0.483 | |||||||
 | GSVIVG00018175001 | SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (723 aa) | • | 0.483 | |||||||
 | GSVIVG00016500001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (752 aa) | • | 0.483 | |||||||
 | GSVIVG00016492001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (797 aa) | • | 0.483 | |||||||
 | GSVIVG00016489001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (766 aa) | • | 0.483 | |||||||
 | UFGT | SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (457 aa) | • | 0.483 | |||||||
 | 4CL | SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (378 aa) | • | 0.483 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 395 | |||
| PLN03172 | 393 | PLN03172, PLN03172, chalcone synthase family prote | 0.0 | |
| PLN03170 | 401 | PLN03170, PLN03170, chalcone synthase; Provisional | 0.0 | |
| PLN03173 | 391 | PLN03173, PLN03173, chalcone synthase; Provisional | 0.0 | |
| PLN03168 | 389 | PLN03168, PLN03168, chalcone synthase; Provisional | 1e-141 | |
| pfam00195 | 227 | pfam00195, Chal_sti_synt_N, Chalcone and stilbene | 1e-139 | |
| cd00831 | 361 | cd00831, CHS_like, Chalcone and stilbene synthases | 1e-138 | |
| PLN03171 | 399 | PLN03171, PLN03171, chalcone synthase-like protein | 1e-133 | |
| PLN03169 | 391 | PLN03169, PLN03169, chalcone synthase family prote | 1e-109 | |
| pfam02797 | 151 | pfam02797, Chal_sti_synt_C, Chalcone and stilbene | 8e-75 | |
| COG3424 | 356 | COG3424, BcsA, Predicted naringenin-chalcone synth | 1e-59 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 5e-38 | |
| cd00827 | 324 | cd00827, init_cond_enzymes, "initiating" condensin | 6e-31 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 4e-30 | |
| cd00830 | 320 | cd00830, KAS_III, Ketoacyl-acyl carrier protein sy | 6e-11 | |
| COG0332 | 323 | COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | 4e-10 | |
| COG3425 | 377 | COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synt | 8e-09 | |
| PLN00415 | 466 | PLN00415, PLN00415, 3-ketoacyl-CoA synthase | 4e-07 | |
| TIGR01835 | 379 | TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylgluta | 9e-07 | |
| PLN02377 | 502 | PLN02377, PLN02377, 3-ketoacyl-CoA synthase | 1e-04 | |
| pfam08541 | 90 | pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- | 2e-04 | |
| PLN02192 | 511 | PLN02192, PLN02192, 3-ketoacyl-CoA synthase | 6e-04 | |
| CHL00203 | 326 | CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein syn | 0.002 | |
| PLN02854 | 521 | PLN02854, PLN02854, 3-ketoacyl-CoA synthase | 0.002 | |
| PLN02932 | 478 | PLN02932, PLN02932, 3-ketoacyl-CoA synthase | 0.004 |
| >gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Score = 538 bits (1386), Expect = 0.0
Identities = 245/384 (63%), Positives = 305/384 (79%), Gaps = 2/384 (0%)
Query: 11 HRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRY 70
R+ GP A ILAIG ATP NC QADYPD++FR+TNSEH ELKEKF+R+C++S I+KRY
Sbjct: 11 QRAEGP-ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRY 69
Query: 71 FYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIF 130
+LTEEILKENPNM Y APSLDAR M++ EVPKLGKEAA KAIKEWGQP SKITHL+F
Sbjct: 70 MHLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVF 129
Query: 131 GAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVV 190
GVDMPGAD +L LLGL+PSV R M+Y QGC+ GG V+R AKD+AENN G+RVLVV
Sbjct: 130 CTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVV 189
Query: 191 CCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250
C +IT + F P++ LD LVGQA+FGDGAAA IIGADPD + ERPLF+++S +Q +P
Sbjct: 190 CSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEIVSAAQTILP 248
Query: 251 NTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKV 310
+++ + GHL+E+G + L KD+P +I K I+K L +A +PIGI+DWNS+F+I HPGG
Sbjct: 249 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPA 308
Query: 311 ILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYG 370
ILDQVE L L +EKL A+R+ LS+YGN+ + VLFILD++RKKS EE K +TGEGLE+G
Sbjct: 309 ILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWG 368
Query: 371 VLFGFGPGITVETVVLRSIPIDSA 394
VLFGFGPG+TVETVVL S+P ++A
Sbjct: 369 VLFGFGPGLTVETVVLHSVPAEAA 392
|
Length = 393 |
| >gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 528 bits (1362), Expect = 0.0
Identities = 240/392 (61%), Positives = 307/392 (78%), Gaps = 2/392 (0%)
Query: 3 TVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICE 62
TV+ R+ GP A +LAIGTATP NC +QADYPD++FR+T SEH ELKEKF+R+C+
Sbjct: 7 TVEEVRKAQRATGP-ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCD 65
Query: 63 RSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPV 122
+S IRKRY +LTEE L ENPNM Y APSLDAR +++ EVPKLGK AA KAIKEWGQP
Sbjct: 66 KSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPK 125
Query: 123 SKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182
SKITHL+F GVDMPGAD +L +LGL PSVNRLM+Y QGC+ GG V+R AKD+AENN
Sbjct: 126 SKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENN 185
Query: 183 PGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVL 242
GARVLVVC +IT + F P+E+ LD +VGQA+FGDGAAA I+GADPD + ERPLFQ++
Sbjct: 186 RGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERV-ERPLFQLV 244
Query: 243 SCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFY 302
S SQ +P++E + GHL+E+G + L KD+P +I K I++ L +A P+GI+D+NS+F+
Sbjct: 245 SASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFW 304
Query: 303 IVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362
+ HPGG ILDQVE +GL KE++ A+R+ LSEYGN+ + VLFILD++RK+S E+ +AT
Sbjct: 305 VAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQAT 364
Query: 363 TGEGLEYGVLFGFGPGITVETVVLRSIPIDSA 394
TGEG ++GVLFGFGPG+TVETVVL S+PI +
Sbjct: 365 TGEGFDWGVLFGFGPGLTVETVVLHSVPITTG 396
|
Length = 401 |
| >gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 515 bits (1326), Expect = 0.0
Identities = 240/389 (61%), Positives = 302/389 (77%), Gaps = 2/389 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M TV R+ GP A I+AIGT+TPPNC Q+ YPD++FR+TNSEHK+ELKEKF+R+
Sbjct: 1 MVTVDEIRKAQRAEGP-ATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
CE+S I+KRY +LTEEILKENP++ Y APSLDAR M++ EVPKLGKEAA KAIKEWGQ
Sbjct: 60 CEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHL+F GVDMPGAD +L LLGL SV R M+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN GARVLVVC +IT + F P++ LD LVGQA+FGDGAAA IIG+DP + + E+PLF+
Sbjct: 180 NNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGV-EKPLFE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
++S +Q +P+++ + GHL+E+G + L KD+P +I K ++K L +A P+GISDWNSL
Sbjct: 239 LVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSL 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F+I HPGG ILDQVE L L EKL A+R+ LSEYGN+ + VLFILD++RKKS E+
Sbjct: 299 FWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGL 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSI 389
+TGEGLE+GVLFGFGPG+TVETVVL S+
Sbjct: 359 KSTGEGLEWGVLFGFGPGLTVETVVLHSV 387
|
Length = 391 |
| >gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 406 bits (1044), Expect = e-141
Identities = 190/380 (50%), Positives = 259/380 (68%), Gaps = 2/380 (0%)
Query: 12 RSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYF 71
R+ GP A +L IGTA PP F Q++YPDFFF +TN K LK KF+RIC++S IRKR+
Sbjct: 11 RAEGP-ACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHM 69
Query: 72 YLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFG 131
+LTEE+LK NP + Y PSL+ RH +++ +VPKL EAA KAIKEWG S ITH++F
Sbjct: 70 FLTEEVLKANPGICTYMEPSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFA 129
Query: 132 AVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVC 191
GV+MPGAD L LLGL+P+V R+M+Y GC+ G +V+R AKD+AENN GARVL V
Sbjct: 130 TTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVA 189
Query: 192 CDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPN 251
++T + + P+E LD LVG A+FGDGA ++G+DP + E+ LF+V + +P
Sbjct: 190 SEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEV-EKALFEVHWAGETILPE 248
Query: 252 TENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKVI 311
++ + GHL E G + L KD+P +I K I+K L +A +G DWN +F+ VHPGG I
Sbjct: 249 SDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAI 308
Query: 312 LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGV 371
LDQVE L L K+K+ SR LSE+GN+ + SVLF+LD +R++S + +T GEG E+G
Sbjct: 309 LDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGF 368
Query: 372 LFGFGPGITVETVVLRSIPI 391
GFGPG+T+E +VLR+
Sbjct: 369 FIGFGPGLTLEVLVLRAAAN 388
|
Length = 389 |
| >gnl|CDD|201072 pfam00195, Chal_sti_synt_N, Chalcone and stilbene synthases, N-terminal domain | Back alignment and domain information |
|---|
Score = 395 bits (1017), Expect = e-139
Identities = 149/218 (68%), Positives = 173/218 (79%), Gaps = 1/218 (0%)
Query: 12 RSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYF 71
R+ GP A ILAIGTATP NC Q+ YPD++FRVT SEH +LKEKF+RICE+S+I+KRY
Sbjct: 11 RAEGP-ATILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYM 69
Query: 72 YLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFG 131
LTEEILKENP + APSLDAR + + EVPKLGKEAALKAIKEWGQP SKITHL+F
Sbjct: 70 VLTEEILKENPELCTEMAPSLDARQDIAVVEVPKLGKEAALKAIKEWGQPKSKITHLVFC 129
Query: 132 AVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVC 191
GVDMPGAD +L LLGL PSV R+M+Y QGC+ GG V+R AKD+AENN GARVLVVC
Sbjct: 130 TTSGVDMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLAKDLAENNKGARVLVVC 189
Query: 192 CDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADP 229
+IT + F P+E LD LVGQA+FGDGAAA IIG+DP
Sbjct: 190 SEITAVTFRGPSETHLDSLVGQALFGDGAAAVIIGSDP 227
|
The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain. Length = 227 |
| >gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Score = 398 bits (1025), Expect = e-138
Identities = 148/374 (39%), Positives = 211/374 (56%), Gaps = 17/374 (4%)
Query: 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLT-- 74
+A ILAIGTA PP+ Q++ DF+ R+ +S+H ELKEK +R+C ++ I RY L
Sbjct: 1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGG 60
Query: 75 EEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVY 134
EE P MS PSLD R+ + +EE +L +EAA A+ E G S I HL+
Sbjct: 61 EETYAPRPEMS----PSLDERNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTST 116
Query: 135 GVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDI 194
G P D L+N LGL P V R + GC G + AKD+ E NPGARVLVV ++
Sbjct: 117 GNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTEL 176
Query: 195 TVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTEN 254
L + P MLVG A+FGDGAAA ++ DP ERPLF+++ + +P++E+
Sbjct: 177 CSLWYRGP--DHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSED 234
Query: 255 NVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSP--IGISDWNSLFYIVHPGGKVIL 312
+ HL E G + LS+D+P ++ K ++++L ++ IG+ + VHPGG+ +L
Sbjct: 235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVL 294
Query: 313 DQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVL 372
D VE+ LGL E L ASR L YGN+ + SVL++L + K +R + G+L
Sbjct: 295 DAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKR-------GDRGLL 347
Query: 373 FGFGPGITVETVVL 386
FGPG T E+ V
Sbjct: 348 IAFGPGFTCESAVW 361
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. Length = 361 |
| >gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Score = 386 bits (992), Expect = e-133
Identities = 180/381 (47%), Positives = 249/381 (65%), Gaps = 10/381 (2%)
Query: 11 HRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRY 70
R+ G +A +LAIGTA P NC Q ++PDF+FR T S+H LK+KF+RIC+ ++KRY
Sbjct: 17 QRADGLAA-VLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRY 75
Query: 71 FYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIF 130
+ TEE+L +P + APSLDAR + + VP+L EAA KAI EWG+P + ITHL+
Sbjct: 76 LHHTEELLSAHPEFLDHDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVV 135
Query: 131 GAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVV 190
G +PG D RL+ LLGL PSV R M++ GC+ G A +R AKD+AENN GARVLVV
Sbjct: 136 TTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVV 195
Query: 191 CCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250
+IT+L F+ P E L+ Q +FGDGAAA I+GAD D + ERPLF+++S +Q +P
Sbjct: 196 AAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAA--ERPLFEIVSAAQAIIP 253
Query: 251 NTENNVVGHLKEMGWDYTLS-KDLPVIIGKYIDKLLADAMSP----IGISDWNSLFYIVH 305
+++ + H E G D + + +P +IG I++ L DA +P G ++WN LF+ VH
Sbjct: 254 ESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH 313
Query: 306 PGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGE 365
PG ILDQV+ LGL EKL ASR LS+YGN+ +V+F LD++R++ E A G
Sbjct: 314 PGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQ--MEEAAAAGA 371
Query: 366 GLEYGVLFGFGPGITVETVVL 386
E GV+ FGPG+TV+ ++L
Sbjct: 372 WPELGVMMAFGPGLTVDAMLL 392
|
Length = 399 |
| >gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Score = 325 bits (835), Expect = e-109
Identities = 156/396 (39%), Positives = 232/396 (58%), Gaps = 16/396 (4%)
Query: 1 MGTVKSNGDVHRSRGPS---AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKF 57
G+ + R + A ILA+G A P Q D +FR T + LKEK
Sbjct: 3 NGSSSA-SKAGSRRAANPGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDP-ALKEKL 60
Query: 58 RRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKE 117
R+C+ ++++ RY +++EIL + P ++ P++ R + E V ++ EA+L IKE
Sbjct: 61 ERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQRLDIANEAVTQMAVEASLACIKE 120
Query: 118 WGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKD 177
WG+PVS ITHL++ + +PG D+ L LGL P V R+M+Y GC G A +R AKD
Sbjct: 121 WGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKD 180
Query: 178 IAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERP 237
IAENNPG+RVL+ + T+L F P+ R LVG A+FGDGAAA IIGADP + ++E P
Sbjct: 181 IAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADP-IPVSESP 239
Query: 238 LFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYI----DKLLADAMSPIG 293
F++ + Q +P TE + G L E G ++ L ++LP I I KL+ A +
Sbjct: 240 FFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKA--GLV 297
Query: 294 ISDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRK 353
D+N LF+ VHPGG IL+++E+ L L EKL SR AL +YGN+ + +++++L+ +R
Sbjct: 298 EKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR- 356
Query: 354 KSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389
EE K E E+G++ FGPGIT E ++ R++
Sbjct: 357 ---EELKKKGEEDEEWGLILAFGPGITFEGILARNL 389
|
Length = 391 |
| >gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 8e-75
Identities = 90/151 (59%), Positives = 119/151 (78%)
Query: 240 QVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNS 299
+++S +Q +P+++ + GHL+E G + L KD+P +I K I+K L +A P+GISDWNS
Sbjct: 1 ELVSAAQTFLPDSDGAIDGHLREEGLTFHLLKDVPQLISKNIEKCLVEAFDPLGISDWNS 60
Query: 300 LFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEER 359
+F+I HPGG ILDQVE LGL EKL ASR+ LSEYGN+ + VLFILD++RKKS ++
Sbjct: 61 IFWIAHPGGPAILDQVEAKLGLKPEKLRASRHVLSEYGNMSSACVLFILDEMRKKSLKKG 120
Query: 360 KATTGEGLEYGVLFGFGPGITVETVVLRSIP 390
K+TTGEGLE+GVLFGFGPG+TVETVVLRS+P
Sbjct: 121 KSTTGEGLEWGVLFGFGPGLTVETVVLRSVP 151
|
This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. Length = 151 |
| >gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 1e-59
Identities = 106/381 (27%), Positives = 174/381 (45%), Gaps = 42/381 (11%)
Query: 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICER----SSIRKRYFYL 73
A I ++ TA PP + Q++ +T+S ++ +E I + I +R+ L
Sbjct: 2 AVIASVATALPPYRYNQSE-------ITDSFAELPFQEGREDIPRVLHANAQINRRHLVL 54
Query: 74 TEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAV 133
+ +E ++ + IEE LG +A +A+ I ++
Sbjct: 55 PLDWYRE--------PHGFGEKNEIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTS 106
Query: 134 YGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCD 193
G+ P D R++ LGL P R+ ++ GC G A + A+D P A VLVVC +
Sbjct: 107 TGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVE 166
Query: 194 ITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTE 253
+ L + + + + LVG A+FGDGAAA ++ D +L P++E
Sbjct: 167 LCSLTYVFADDTKSN-LVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSE 225
Query: 254 NNVVGHLKEMGWDYT-------LSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHP 306
MGWD LS+DLP +I Y+ + ++ G+S + ++VHP
Sbjct: 226 -------DIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHP 278
Query: 307 GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEG 366
GG ++D E++LGL E L S L EYGN+ + +VLF+L+D +K+ +
Sbjct: 279 GGPKVIDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKAPKS-------- 330
Query: 367 LEYGVLFGFGPGITVETVVLR 387
G++F GPG E V+L
Sbjct: 331 GSRGLMFAMGPGFCSELVLLD 351
|
Length = 356 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 5e-38
Identities = 65/288 (22%), Positives = 100/288 (34%), Gaps = 44/288 (15%)
Query: 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD-MPGADVRLMNLLGLEPSVNRLMIY 161
+LG EAA +AI + G I +I G G GA +L LG+ +
Sbjct: 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI-SGGPAYSVN 65
Query: 162 SQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAA 221
Q C G + A +N VL + +FGDGAA
Sbjct: 66 -QACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------FVFGDGAA 105
Query: 222 AAIIGADPDVSLN-ERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKY 280
AA++ ++ P +++S + + V G+
Sbjct: 106 AAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVS-------------------GEG 146
Query: 281 IDKLLADAMSPIGISDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLG--ASRYALSEYGN 338
+ + A+ G++ + + H G I D VE LGL + + A L G+
Sbjct: 147 LARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGH 206
Query: 339 LGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVL 386
+ L ILD++ E T +L GFG G T VVL
Sbjct: 207 PLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 6e-31
Identities = 76/296 (25%), Positives = 117/296 (39%), Gaps = 27/296 (9%)
Query: 101 EEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD-MPGADVRLMNLLGLEPSVNRLM 159
E+VP + EAA +A++ G I LI +D A L LLGL +
Sbjct: 46 EDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGL-TNAEAFD 104
Query: 160 IYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDG 219
+ Q CY G A ++ A ++ E+ P LVV DI E + GDG
Sbjct: 105 L-KQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSALE-------PTLGDG 156
Query: 220 AAAAIIGADPDV-SLNERPLFQVLSCSQ-------MTVPNTENNVVGHLKEMGWDYTLSK 271
AAA ++ +P + + M + + + + + +
Sbjct: 157 AAAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPA-GR 215
Query: 272 DLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASR- 330
+ K I K++ A+ G+S+ F P GK IL+ V + LG EK +R
Sbjct: 216 AVFEAAHKLIAKVVRKALDRAGLSEDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRW 275
Query: 331 YALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVL 386
L GN+ A S+L L + E K G+ + +LF +G G T E VL
Sbjct: 276 ILLRRVGNMYAASILLGLASLL----ESGKLKAGDRV---LLFSYGSGFTAEAFVL 324
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. Length = 324 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 4e-30
Identities = 59/343 (17%), Positives = 99/343 (28%), Gaps = 80/343 (23%)
Query: 103 VPKLGKEAALKAIKEWG----QPVSKITHLIFGAVYGVD--------------------- 137
V LG EAA +AI + G + I ++ G G
Sbjct: 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKA 70
Query: 138 -MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITV 196
PGA ++ LG+ + C + A D +N VL +
Sbjct: 71 MFPGASGQIATPLGI--HGPAYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELA 127
Query: 197 LHFHEPTEAR------------LDMLVGQAIFGDGAAAAIIGADPDVSLN-ERPLFQVLS 243
+A D +FGDGA A ++ +++
Sbjct: 128 APMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVG 187
Query: 244 CSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYI 303
+ + + + +A++ G++ W+ + +
Sbjct: 188 TAATIDGAGMG------------------AFAPSAEGLARAAKEALAVAGLTVWDIDYLV 229
Query: 304 VHPGGKVILDQVEQNLGLG--KEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKA 361
H G I D E L +K A + GNL + +V+ +D+
Sbjct: 230 AHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIP 289
Query: 362 ------------------TTGEGLEYGVLFGFGPGITVETVVL 386
TT L +L GFG G T T+VL
Sbjct: 290 PSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Score = 62.9 bits (154), Expect = 6e-11
Identities = 86/393 (21%), Positives = 139/393 (35%), Gaps = 96/393 (24%)
Query: 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSE--HKIELKEKFRRICERSSIRKRYFYLT 74
+A+IL IG+ P VTN E +++ + I R+ IR+R
Sbjct: 1 NARILGIGSYLPERV------------VTNDELEKRLDTSD--EWIRTRTGIRER----- 41
Query: 75 EEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAV- 133
R A E L EAA KA+++ G I +I
Sbjct: 42 --------------------RIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATST 81
Query: 134 --YGVDMPGADVRLMNLLGLEPSVNRLMIYSQGC--YMGGAVIRHAKDIAENNPGARVLV 189
Y P + LG + + + C ++ G A + + VLV
Sbjct: 82 PDYL--FPATACLVQARLGAKNAAA--FDINAACSGFLYGLST--AAGLIRSGGAKNVLV 135
Query: 190 VCCDIT--VLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADP------DVSL----NERP 237
V + +L + + + A +FGDGA A ++ A D L +
Sbjct: 136 VGAETLSRILDWTDRSTA--------VLFGDGAGAVVLEATEEDPGILDSVLGSDGSGAD 187
Query: 238 LFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGIS-- 295
L + P + M + K ++ + I++ L A G++
Sbjct: 188 LLTI-PAGGSRSPFEDAEGGDPYLVM-DGREVFKFAVRLMPESIEEALEKA----GLTPD 241
Query: 296 --DWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRK 353
DW ++ H I++ V + LGL +EK+ L YGN A S+ LD+
Sbjct: 242 DIDW----FVPHQANLRIIEAVAKRLGLPEEKV---VVNLDRYGNTSAASIPLALDEAI- 293
Query: 354 KSTEERKATTGEGLEYGVLFGFGPGITVETVVL 386
EE K G + +L GFG G+T +L
Sbjct: 294 ---EEGKLKKG---DLVLLLGFGAGLTWGAALL 320
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320 |
| >gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 60.3 bits (147), Expect = 4e-10
Identities = 79/387 (20%), Positives = 139/387 (35%), Gaps = 84/387 (21%)
Query: 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEE 76
+AKIL IG+ P VTN++ + + I R+ IR+R +E
Sbjct: 3 NAKILGIGSYLPER------------VVTNADLEKRVDTSDEWIETRTGIRERRIAADDE 50
Query: 77 ILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGV 136
+ L EAA KA+++ G I +I
Sbjct: 51 TTSD-------------------------LAVEAARKALEDAGISPDDIDLIIVATSTPD 85
Query: 137 D-MPGADVRLMNLLGLEPSVNRLMIY--SQGCYMGGAV--IRHAKDIAENNPGARVLVVC 191
P + LGL + + C G + + A + + VLVV
Sbjct: 86 HLFPSTACLVQARLGLGGAP----AFDLQAAC--SGFLYALSVADGLIRSGGYKNVLVVG 139
Query: 192 CDIT--VLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPD----VSLNERPL---FQVL 242
+ +L + + +FGDGA A ++ A D + + +L
Sbjct: 140 AETLSRILDWTDRDTC--------VLFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLL 191
Query: 243 SCS-QMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADA-MSPIGISDWNSL 300
+ E + G L + K + K I+++L A ++P I DW
Sbjct: 192 YLPGGGSATPKEESGGGLLVM--DGREVFKFAVRAMPKAIEEVLEKAGLTPEDI-DW--- 245
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
++ H I++ + + LG+ +EK+ + +YGN A S+ LD ++ E +
Sbjct: 246 -FVPHQANLRIIEAIAKKLGIPEEKV---VVTVDKYGNTSAASIPLALD----EALREGR 297
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLR 387
G + +L FG G+T ++R
Sbjct: 298 IKPG---DLVLLEAFGGGLTWGAALVR 321
|
Length = 323 |
| >gnl|CDD|225959 COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 8e-09
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 19/131 (14%)
Query: 106 LGKEAALKAIKEWGQPVSKITHLIFGAVYGVDM--PGADVRLMNLLGLEPSVNRLMIYSQ 163
+ EAA A+K SKI +I G+ G D P A + + LGL PS R
Sbjct: 54 MAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATI-VAEALGLNPSA-RAADVEF 111
Query: 164 GCYMGGAVIRHAKDIAENNPGARVLVVCCDIT---VLHFHEPTEARLDMLVGQAIFGDGA 220
CY G A ++ A E+ + LV+ D E T G GA
Sbjct: 112 ACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPGDALEYT------------AGAGA 159
Query: 221 AAAIIGADPDV 231
A +IG +P +
Sbjct: 160 VAFLIGKNPPI 170
|
Length = 377 |
| >gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 4e-07
Identities = 70/302 (23%), Positives = 112/302 (37%), Gaps = 69/302 (22%)
Query: 139 PGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH 198
P ++N L+ V + GC G + A ++ + NP ++V + L
Sbjct: 170 PSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLS 229
Query: 199 FHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVG 258
+ + MLV +F G AA V L+ R +V S ++T + V
Sbjct: 230 MYRGNDR--SMLVPNCLFRVGGAA--------VMLSNRSQDRVRSKYELT-----HIVRT 274
Query: 259 HLKEMGWDYT---------------LSKDLPVIIGKYI---------------------- 281
H YT LSK+L V+ G +
Sbjct: 275 HKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFIL 334
Query: 282 ----DKLLADAMSPIGISDWNSLF--YIVHPGGKVILDQVEQNLGLGKEKLGASRYALSE 335
KL +SP + D+ F + +H GG+ +LD VE+ LGL + L SR L
Sbjct: 335 FLVKSKLFRLKVSPY-VPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHR 393
Query: 336 YGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVV---LRSIPID 392
+GN + S+ + L V K +R + FG G ++V LR+IP +
Sbjct: 394 FGNTSSSSLWYELAYVEAKCRVKRGDRVWQ-------LAFGSGFKCNSIVWRALRTIPAN 446
Query: 393 SA 394
+
Sbjct: 447 ES 448
|
Length = 466 |
| >gnl|CDD|213655 TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 9e-07
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 101 EEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMP-GADVRLMNLLGLEPSVNRLM 159
E++ + AA + + KI +IFG G+D A V + LLGL+P R
Sbjct: 47 EDIVTMAASAAKPILDRNDK--QKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFC-RSF 103
Query: 160 IYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLV-GQAIFGD 218
Q CY A ++ AK +P +VLV+ DI A+ + G+ G
Sbjct: 104 ELKQACYGATAALQMAKGHVALSPDRKVLVIASDI----------AKYGLESPGEPTQGA 153
Query: 219 GAAAAIIGADPDV-SLNE 235
GA A ++ ADP + ++NE
Sbjct: 154 GAVAMLVSADPKLLAINE 171
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. Length = 379 |
| >gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 281 IDKLLADAMSPIGISDWNSLF--YIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGN 338
+ KL M P I D+ F + +H GG+ ++D++E+NL L + ASR L +GN
Sbjct: 376 VKKLFNKKMKPY-IPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGN 434
Query: 339 LGAPSVLFILDDVRKKSTEER 359
+ S+ + L + K +
Sbjct: 435 TSSSSIWYELAYIEAKGRMRK 455
|
Length = 502 |
| >gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 2e-04
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
+++ H I+D V + LGL EK L YGN A S+ LD+ EE K
Sbjct: 13 WFVPHQANLRIIDAVAKRLGLPPEK---VVVNLDRYGNTSAASIPLALDEAV----EEGK 65
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLR 387
G+ +L GFG G+T VLR
Sbjct: 66 LKPGD---LVLLVGFGAGLTWGAAVLR 89
|
This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 90 |
| >gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 6e-04
Identities = 79/383 (20%), Positives = 140/383 (36%), Gaps = 74/383 (19%)
Query: 47 SEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKL 106
+E +E + R+I ERS + + YL E +L PN C +A M + +L
Sbjct: 134 TEENLEFQ---RKILERSGLGEST-YLPEAVLNVPPN-PCMAEARKEAETVMF-GAIDQL 187
Query: 107 GKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCY 166
+ ++K I LI P ++N L ++ + GC
Sbjct: 188 LAKTSVKP--------KDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCS 239
Query: 167 MGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIG 226
G I AK + + +P + LV+ + L+++ + MLV +F G AA ++
Sbjct: 240 AGLISIDLAKHLLQVHPNSYALVISMENITLNWYFGNDR--SMLVSNCLFRMGGAAILLS 297
Query: 227 ADPD------------VSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLP 274
V ++ + +C +T +G +LSKDL
Sbjct: 298 NKRSDRRRSKYQLVHTVRTHKGADDKCFAC--VTQEEDSAGKIG--------VSLSKDLM 347
Query: 275 VIIGKYID--------------------------KLLADAMSPIGISDWNSLF--YIVHP 306
+ G + KL + P I D+ F + +H
Sbjct: 348 AVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPY-IPDFKLAFEHFCIHA 406
Query: 307 GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEG 366
GG+ +LD++E+NL L + SR L +GN + S+ + L K ++ T +
Sbjct: 407 GGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQ- 465
Query: 367 LEYGVLFGFGPGITVETVVLRSI 389
FG G + V +++
Sbjct: 466 ------IAFGSGFKCNSAVWKAL 482
|
Length = 511 |
| >gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 85/393 (21%), Positives = 145/393 (36%), Gaps = 94/393 (23%)
Query: 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEI 77
IL+ G++ P + D + S+H I R+ I+KR+
Sbjct: 3 VHILSTGSSVPNFSVENQQFEDI---IETSDH---------WISTRTGIKKRHL------ 44
Query: 78 LKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD 137
APS + + KL EAA KA+ + +I +I D
Sbjct: 45 -----------APSSTS--------LTKLAAEAANKALDKAHMDPLEIDLIILATSTPDD 85
Query: 138 MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVL 197
+ G+ +L +G +V + C + A +N +LVV D
Sbjct: 86 LFGSASQLQAEIGATRAV--AFDITAACSGFILALVTATQFIQNGSYKNILVVGADTL-- 141
Query: 198 HFHEPTEARLDMLVGQ-----AIFGDGAAAAIIGA-----------DPDVSLNERPLFQV 241
+ +FGDGA AAIIGA D LN Q+
Sbjct: 142 ---------SKWIDWSDRKTCILFGDGAGAAIIGASYENSILGFKLCTDGKLNSH--LQL 190
Query: 242 L-------SCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGI 294
+ S +P + + + + + + + +P +I K ++ L I I
Sbjct: 191 MNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQ-VPAVIIKCLNAL------NISI 243
Query: 295 SDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354
+ + ++I+H K IL+ + L + K+ + L +YGN A S+ LD+
Sbjct: 244 DEVD--WFILHQANKRILEAIANRLSVPNSKMITN---LEKYGNTSAASIPLALDE---- 294
Query: 355 STEERKATTGEGLEYGVLFGFGPGITVETVVLR 387
+ + K G+ + VL GFG G+T +VL+
Sbjct: 295 AIQNNKIQPGQII---VLSGFGAGLTWGAIVLK 324
|
Length = 326 |
| >gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 58/261 (22%), Positives = 101/261 (38%), Gaps = 43/261 (16%)
Query: 164 GCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAA 223
GC G I A D+ + NP + +VV + L+++ + ML+ IF G AA
Sbjct: 249 GCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDR--SMLLCNCIFRMGGAAV 306
Query: 224 IIGADP-DVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMG-WDYTLSKDLPVIIGKYI 281
++ D ++ L + + N V + G +L+++L + G +
Sbjct: 307 LLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDAL 366
Query: 282 D--------------------------KLLADAMSPIGISDWNSLF--YIVHPGGKVILD 313
KLL + P I D+ F + +H GG+ +LD
Sbjct: 367 KTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPY-IPDFKLAFEHFCIHAGGRAVLD 425
Query: 314 QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLF 373
++++NL L + SR L +GN + S+ + L TE + + + +
Sbjct: 426 ELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYEL-----AYTEAKGRVSAGDRVWQI-- 478
Query: 374 GFGPGITVETVV---LRSIPI 391
FG G + V LR IP
Sbjct: 479 AFGSGFKCNSAVWKALREIPT 499
|
Length = 521 |
| >gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 38.9 bits (90), Expect = 0.004
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 302 YIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFIL 348
+ +H GG+ ++D++E+NL L + ASR L +GN + S+ + L
Sbjct: 374 FCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYEL 420
|
Length = 478 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 395 | |||
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 100.0 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 100.0 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 100.0 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 100.0 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 100.0 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 100.0 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 100.0 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 100.0 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 100.0 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 100.0 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 100.0 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 100.0 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 100.0 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 100.0 | |
| PRK06840 | 339 | hypothetical protein; Validated | 100.0 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 100.0 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 100.0 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 100.0 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 100.0 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 100.0 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 100.0 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 100.0 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 100.0 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 100.0 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.97 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.95 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 99.94 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 99.93 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.87 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 99.85 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.82 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 99.8 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.78 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.75 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.72 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.7 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.7 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.68 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.66 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.66 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.65 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.65 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.65 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.64 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.64 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.64 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.64 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.63 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.61 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.61 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 99.6 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.59 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.59 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.59 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.58 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.57 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.57 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.57 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.55 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.54 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.54 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.54 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.54 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.53 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.52 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.52 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.51 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.5 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.5 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.5 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.5 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.49 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.49 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.49 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.49 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.48 | |
| PRK06158 | 384 | thiolase; Provisional | 99.48 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.47 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.47 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.47 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.47 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.47 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.46 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.46 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.46 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.46 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.45 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.45 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.45 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.45 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.45 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.44 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.44 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.43 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 99.42 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.41 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.41 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.41 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.37 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.34 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.33 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.28 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.26 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.26 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 99.25 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.24 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 99.18 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.13 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.09 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.02 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 98.98 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 98.96 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 98.93 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 98.87 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 98.81 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 98.8 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 98.78 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 98.32 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 98.2 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 98.14 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.66 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 97.63 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 97.49 | |
| PF08540 | 282 | HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s | 97.18 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 96.21 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 96.08 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 94.85 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 93.74 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 93.65 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 92.77 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 92.51 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 92.3 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 92.17 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 92.1 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 92.08 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.83 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 91.67 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 91.26 | |
| PRK06840 | 339 | hypothetical protein; Validated | 90.93 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 90.89 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 90.51 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 89.36 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 89.12 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 88.87 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 88.66 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 88.62 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 88.37 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 88.31 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 88.21 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 88.18 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 86.58 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 85.73 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 82.16 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 82.02 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 81.73 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 81.64 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 80.38 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 80.02 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 80.01 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 80.01 |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-63 Score=484.18 Aligned_cols=376 Identities=64% Similarity=1.075 Sum_probs=327.7
Q ss_pred cCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCC
Q 016094 11 HRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAP 90 (395)
Q Consensus 11 ~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~ 90 (395)
+++++| +.|.|+|+++|++.++|+++.+++.+.++.++.+.+++++.+|++++||++||++.+.+.+..++++..++.|
T Consensus 11 ~~~~~~-~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p 89 (393)
T PLN03172 11 QRAEGP-ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAP 89 (393)
T ss_pred CCCCCC-eEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCC
Confidence 477789 9999999999999999999999987666443445666667889999999999999876555555655556789
Q ss_pred CHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHH
Q 016094 91 SLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGA 170 (395)
Q Consensus 91 ~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~ 170 (395)
++++|++.|.+...+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.++++++.||+|++.
T Consensus 90 ~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~ 169 (393)
T PLN03172 90 SLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGT 169 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHH
Confidence 99999999999999999999999999999999999999999999966999999999999998876446899999999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecC
Q 016094 171 VIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250 (395)
Q Consensus 171 al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p 250 (395)
||++|..++++++.++||||++|.+|.+|.++.|.+.++.....+|||||+|+||++++..+. ..+.|++.+..+..+|
T Consensus 170 aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~-~~~~~~i~~~~~~~~~ 248 (393)
T PLN03172 170 VLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEIVSAAQTILP 248 (393)
T ss_pred HHHHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcc-cCceeEEeeeccEEec
Confidence 999999999999999999999999996576565533444567899999999999998654322 2245788888778889
Q ss_pred CCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHH
Q 016094 251 NTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGAS 329 (395)
Q Consensus 251 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~ 329 (395)
.+++.+.|.+.+.|+.+.+.+++|+.+.+.++++++++|+++|++. .|+ +|++||+|+++++.+++.||++++++..+
T Consensus 249 ~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~-~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s 327 (393)
T PLN03172 249 DSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGIND-WNSIFWIAHPGGPAILDQVEIKLDLKEEKLRAT 327 (393)
T ss_pred CCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999888888888899999999999999999999999997 888 99999999999999999999999999999
Q ss_pred HHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEec
Q 016094 330 RYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 330 ~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
|+++++||||+|+++|++|++++++..++|++++|++.|++++++||+|++|++++|||.
T Consensus 328 ~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 328 RHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred HHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEec
Confidence 999999999999999999999985323336777764447899999999999999999995
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-63 Score=485.66 Aligned_cols=377 Identities=62% Similarity=1.072 Sum_probs=327.5
Q ss_pred cCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCC
Q 016094 11 HRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAP 90 (395)
Q Consensus 11 ~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~ 90 (395)
+++++| .+|.+||+.+|++.++++++.+++++.++.+..+++++++.+|++++||++||++.+++.+..++++..++.|
T Consensus 15 ~~~~~~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p 93 (401)
T PLN03170 15 QRATGP-ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAP 93 (401)
T ss_pred CCCCCC-eEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCC
Confidence 467788 9999999999999999999999987766433345566678899999999999999876555455665566789
Q ss_pred CHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHH
Q 016094 91 SLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGA 170 (395)
Q Consensus 91 ~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~ 170 (395)
++++|++.|.+...+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.++++++.||+|++.
T Consensus 94 ~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~ 173 (401)
T PLN03170 94 SLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGT 173 (401)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHHHH
Confidence 99999999999999999999999999999999999999999999966999999999999999876457999999999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecC
Q 016094 171 VIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250 (395)
Q Consensus 171 al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p 250 (395)
||++|.+++++++.++||||++|.+|..|.+|.+.+++++....+|||||+|+||++++..++ ..+.|++.+.++..+|
T Consensus 174 aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~-~~~~~~l~~~~~~~~p 252 (401)
T PLN03170 174 VLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERV-ERPLFQLVSASQTILP 252 (401)
T ss_pred HHHHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccc-cCCceEEeeccceEec
Confidence 999999999999999999999999998665555433456667889999999999998765322 2235778877777788
Q ss_pred CCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHH
Q 016094 251 NTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGAS 329 (395)
Q Consensus 251 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~ 329 (395)
++++.+.|.+.+.|+.+.+++++++.+.+.++++++++|+++|++. +|+ +|++||+|+++++.+++.||++++|+..+
T Consensus 253 ~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~-~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s 331 (401)
T PLN03170 253 DSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITD-YNSIFWVAHPGGPAILDQVEAKVGLEKERMRAT 331 (401)
T ss_pred CCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEecCCcHHHHHHHHHHcCCChHHHHHH
Confidence 8888888888888988888899999999999999999999999997 888 99999999999999999999999999988
Q ss_pred HHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 330 RYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 330 ~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
|+++++||||+|+++|++|++++++..++|++++|++.|++++++||+|++|++++|||.+
T Consensus 332 ~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 332 RHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVP 392 (401)
T ss_pred HHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHheecc
Confidence 9999999999999999999999853222377777744478999999999999999999953
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-62 Score=479.20 Aligned_cols=379 Identities=61% Similarity=1.045 Sum_probs=327.6
Q ss_pred cccCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCC
Q 016094 9 DVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYK 88 (395)
Q Consensus 9 ~~~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 88 (395)
.-+++++| ++|.++|+.+|++.++++++.+++.+...++..+.+++++.+|++++||++||++.+.+.+..+|++..+.
T Consensus 9 ~~~~~~~~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~ 87 (391)
T PLN03173 9 KAQRAEGP-ATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYM 87 (391)
T ss_pred cCCCCCCC-eEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCccccccc
Confidence 34578899 99999999999999999999999877663333455666688999999999999998766555556666667
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 016094 89 APSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMG 168 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~ 168 (395)
.|++++|+++|.+...+|+++|+++||+++|++++|||+||++|++++..|+.+.+|+++||+++...++++++.||+|+
T Consensus 88 ~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~ 167 (391)
T PLN03173 88 APSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAG 167 (391)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHH
Confidence 89999999999999999999999999999999999999999999999668999999999999998764478999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeccee
Q 016094 169 GAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMT 248 (395)
Q Consensus 169 ~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~ 248 (395)
+.||++|.+++++++.++||||++|.+|.+|.++.+.++++.....+|||||+|+||+.++..++ ..+.|++.+..+..
T Consensus 168 ~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~-~~~~~~l~~~~~~~ 246 (391)
T PLN03173 168 GTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGV-EKPLFELVSAAQTI 246 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCc-CCcceEEEeeeeEE
Confidence 99999999999999999999999999996576665533444467899999999999998654332 22457888887788
Q ss_pred cCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccch
Q 016094 249 VPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLG 327 (395)
Q Consensus 249 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~ 327 (395)
+|.+++.+.|.+.+.|+.+.+.+++|+.+.+.++++++++|+++|++. +|| +|++||+|+++++.+++.||++++|+.
T Consensus 247 ~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~-~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~ 325 (391)
T PLN03173 247 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISD-WNSLFWIAHPGGPAILDQVEAKLALKPEKLR 325 (391)
T ss_pred ecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEECCCcHHHHHHHHHHcCCChHHHH
Confidence 899999899999888888888899999999999999999999999997 898 999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 328 ASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 328 ~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
.+|+++++||||+|+++|++|++++++..+++.+++|++.+++++++||+|+++++++|||..
T Consensus 326 ~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~~ 388 (391)
T PLN03173 326 ATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHSVA 388 (391)
T ss_pred HHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHhhcc
Confidence 999999999999999999999999964222244444433378999999999999999999854
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-62 Score=478.18 Aligned_cols=377 Identities=50% Similarity=0.881 Sum_probs=321.5
Q ss_pred ccCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCC
Q 016094 10 VHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKA 89 (395)
Q Consensus 10 ~~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~ 89 (395)
-+++++| ++|.+||+.+|++.++|+++.+++++...++..+.+++++.+|++++||++||++.+.+.+..++++..+..
T Consensus 9 ~~~~~~~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ 87 (389)
T PLN03168 9 QPRAEGP-ACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYME 87 (389)
T ss_pred CCCCCCC-eEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccC
Confidence 4588899 999999999999999999999998776643344566777889999999999999987665555666666678
Q ss_pred CCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHH
Q 016094 90 PSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGG 169 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~ 169 (395)
|++++|+++|.+...+|+.+|+++||+++|++++|||+||++|+|++..|+++.+|+++||+++.+.++++++.||+|++
T Consensus 88 ps~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~ 167 (389)
T PLN03168 88 PSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGA 167 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHH
Confidence 99999999999999999999999999999999999999999999997789999999999999987655899999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceec
Q 016094 170 AVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTV 249 (395)
Q Consensus 170 ~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~ 249 (395)
.||++|..++++++.++||||++|.+|.+|.++.+.+.+++.+..+|||||+|+||++++.... +.+.+++....+..+
T Consensus 168 ~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~-~~~~~~~~~~~~~~~ 246 (389)
T PLN03168 168 SVLRVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEV-EKALFEVHWAGETIL 246 (389)
T ss_pred HHHHHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCcc-CCcceEEEeeeeEEE
Confidence 9999999999999999999999999998665443322344567899999999999998654321 123567776666678
Q ss_pred CCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchH
Q 016094 250 PNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGA 328 (395)
Q Consensus 250 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~ 328 (395)
|++.+.+.|.+.+.|+.+.+.+++++.+.+.+..+++++|++.++.. .|+ +|++||+|++|++.++++||+++||+..
T Consensus 247 p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~-~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~ 325 (389)
T PLN03168 247 PESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD-WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQG 325 (389)
T ss_pred cCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHHH
Confidence 98888888988888888877789999999999999999999999886 666 9999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEec
Q 016094 329 SRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 329 ~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
+|+++++||||+||++|++|++++++++++|....|.|.|++++++||+|++|++++|||.
T Consensus 326 s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~ 386 (389)
T PLN03168 326 SRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAA 386 (389)
T ss_pred HHHHHHHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEEEcchhhhhhhhheec
Confidence 8999999999999999999999876532222100011128999999999999999999994
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-60 Score=468.76 Aligned_cols=363 Identities=41% Similarity=0.724 Sum_probs=308.4
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.|+|+++|+++++|+++.+.+.+..... .+.++++.++|++++||++||++.+.+.+..+|.+..+..|++++|++
T Consensus 22 ~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 100 (391)
T PLN03169 22 ATILALGKAFPSQLVPQEYLVDGYFRDTKCD-DPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQRLD 100 (391)
T ss_pred eEEEEEEeeCCCeecCHHHHHHHHHHHhccc-CHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHHHH
Confidence 8999999999999999999998664433211 345666678899999999999987544444456666667899999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ 177 (395)
.|.+...+|+++|+++||+++|++++|||+||++|++.+..|+.+.+|+++||+++...++++++.||+|++.||.+|.+
T Consensus 101 ~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~ 180 (391)
T PLN03169 101 IANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKD 180 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999876889999999999999987653468999999999999999999
Q ss_pred HHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCcee
Q 016094 178 IAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVV 257 (395)
Q Consensus 178 ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 257 (395)
++++++.++||||++|.++..+..+.+..+.++.+..+|||||+|+||++++.... ....+++...+...+|.+.+.+.
T Consensus 181 ~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~-~~~~~~l~~~~~~~ip~~~~~~~ 259 (391)
T PLN03169 181 IAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVS-ESPFFELHTAIQQFLPGTEKTID 259 (391)
T ss_pred HHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCccc-CCcceEEEeeeeeEcCCCccccC
Confidence 99999999999999999886554222222345667899999999999998664210 11346666666667888776677
Q ss_pred eeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCC--CCceEEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHh
Q 016094 258 GHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISD--WNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSE 335 (395)
Q Consensus 258 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~--~~di~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~ 335 (395)
|.+.+.|+.+.+++++|+++.+.++++++++|+++|+++ .++++|++||+|++|++.++++||++++|+..+|+++++
T Consensus 260 ~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~ 339 (391)
T PLN03169 260 GRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMD 339 (391)
T ss_pred ceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 777788888888999999999999999999999999985 134478999999999999999999999999988889999
Q ss_pred cCCCCcchHHHHHHHHHhhhhhhhccc---CCCCCceEEEEEEcccceeeeeeEEec
Q 016094 336 YGNLGAPSVLFILDDVRKKSTEERKAT---TGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 336 ~Gn~~sasi~~~L~~~~~~~~~~g~l~---~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
||||+||++|++|++++++ ++++ +| |++++++||+|++|++++|||.
T Consensus 340 ~GNtsSasip~~L~~~~~~----~~~~~~~~g---d~~ll~afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 340 YGNVSSNTIVYVLEYMREE----LKKKGEEDE---EWGLILAFGPGITFEGILARNL 389 (391)
T ss_pred hCCchHhHHHHHHHHHHHh----hcccCCCCC---cEEEEEEEcccHhHHHHHHhhh
Confidence 9999999999999999987 6665 57 9999999999999999999984
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-61 Score=456.18 Aligned_cols=313 Identities=22% Similarity=0.283 Sum_probs=271.0
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
.++|.++|.|+|+++++|++++..+ ..+ .+||.+++||++||++.++|.
T Consensus 3 ~a~i~g~G~~lP~~~vtn~d~e~~~---~ts---------dewI~~rtGir~R~~a~~~e~------------------- 51 (323)
T COG0332 3 NAKILGIGSYLPERVVTNADLEKRV---DTS---------DEWIETRTGIRERRIAADDET------------------- 51 (323)
T ss_pred cceEEEEEeecCCcccChHHHHhcc---CCC---------cceeeeecCCceeeecCCCcc-------------------
Confidence 3789999999999999999999653 443 379999999999999988774
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
.++|+++|+++||+++|++|+|||+||++|++| +.+|++|+.||++||+.... +||++.+|+|++.||.+|
T Consensus 52 ------~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--afDl~aaCsgf~yaL~~A 123 (323)
T COG0332 52 ------TSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--AFDLQAACSGFLYALSVA 123 (323)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--eeechhhhHHHHHHHHHH
Confidence 899999999999999999999999999999999 78999999999999999866 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCC-CCCCCCCCceEEEeeccee----cC
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADP-DVSLNERPLFQVLSCSQMT----VP 250 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~-~~~~~~~~~~~l~~~~~~~----~p 250 (395)
.++|++|.+++||||++|.+|. +.++ ++|.+.++|||||+|+||++.+ ..++ ..+.+.+.+... .|
T Consensus 124 ~~~i~sG~~k~vLVVg~e~~S~-~ld~-----~dR~t~vlFgDGAgAvvl~~~~~~~~i---~~~~l~sdg~~~~~l~~~ 194 (323)
T COG0332 124 DGLIRSGGYKNVLVVGAETLSR-ILDW-----TDRDTCVLFGDGAGAVVLEATEDDNGI---LDTDLGSDGSQGDLLYLP 194 (323)
T ss_pred HHHHHcCCCCEEEEEehhHhhc-cCCH-----hhccceEEEcCCceEEEEecCCCCcCe---eeeeeeccccCCCeeecc
Confidence 9999999999999999999997 5554 3567899999999999999987 4333 234454444321 12
Q ss_pred CCCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchH
Q 016094 251 NTENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGA 328 (395)
Q Consensus 251 ~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~ 328 (395)
...... .........+.| ++++|+++++.++++++++|+++++++ +|| +|+|||+|.++++.++++|++|++|++.
T Consensus 195 ~~~~~~-~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~-~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~ 272 (323)
T COG0332 195 GGGSAT-PKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP-EDIDWFVPHQANLRIIEAIAKKLGIPEEKVVV 272 (323)
T ss_pred CCCCcc-ccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEccccccHHHHHHHHHHcCCCHHHHhh
Confidence 211110 000011124555 899999999999999999999999998 999 9999999999999999999999999998
Q ss_pred HHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEec
Q 016094 329 SRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 329 ~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
+ +++|||+++||+|++|++++++ |++++| |+++|++||+|++||++++||.
T Consensus 273 ~---~~~yGNtsaAsiplaL~~~~~~----g~ik~G---d~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 273 T---VDKYGNTSAASIPLALDEALRE----GRIKPG---DLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred H---HHHhcccccchHHHHHHHHhhh----CCCCCC---CEEEEEeecCcceeeeEEEEeC
Confidence 5 9999999999999999999999 999999 9999999999999999999984
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-58 Score=453.78 Aligned_cols=370 Identities=48% Similarity=0.826 Sum_probs=304.0
Q ss_pred CCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCC
Q 016094 12 RSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPS 91 (395)
Q Consensus 12 ~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
+++++ ++|.|+|+|+|+++++|+++.+.+.+.+..+..++++++.+||++++||++||++.+++.+..+|++.....|+
T Consensus 18 ~~~~~-~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 18 RADGL-AAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCCC-cEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 67788 99999999999999999999998644322233345666788999999999999998765445556666667899
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHH
Q 016094 92 LDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAV 171 (395)
Q Consensus 92 ~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~a 171 (395)
+++|+++|.+...+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++...+++++.+||+|++.+
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~a 176 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAA 176 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHH
Confidence 99999999999999999999999999999999999999999999558999999999999987653356778899999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEecccccccCCCCchh-hhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecC
Q 016094 172 IRHAKDIAENNPGARVLVVCCDITVLHFHEPTEAR-LDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250 (395)
Q Consensus 172 l~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~-~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p 250 (395)
|++|.+++++++.++||||++|.+|..+ ++.+.+ ++......+|||||+|+||++.++.. ....+++........|
T Consensus 177 L~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~--~~~~~~l~~~~~~~~p 253 (399)
T PLN03171 177 LRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAA--ERPLFEIVSAAQAIIP 253 (399)
T ss_pred HHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCC--CCCceEEEEeeeEEec
Confidence 9999999999999999999999999744 343322 33344578999999999999866421 1134677766666688
Q ss_pred CCCCceeeeEecCceeEEeC-CcchHHHHHhHHHHHHHhhcc-----cCCCCCCceEEEEcCCChHHHHHHHHHcCCCcc
Q 016094 251 NTENNVVGHLKEMGWDYTLS-KDLPVIIGKYIDKLLADAMSP-----IGISDWNSLFYIVHPGGKVILDQVEQNLGLGKE 324 (395)
Q Consensus 251 ~~~~~~~~~~~~~g~~~~~~-~~v~~~~~~~~~~~i~~~L~~-----~g~~~~~di~~i~H~~~~~~~~~i~~~lgi~~e 324 (395)
.+.+.+.|...+.++.+.+. +.+++.+.+.+.++++++|++ .|++. +|+.|++||+|.++++.++++||++++
T Consensus 254 ~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~-~di~~~~Hq~~~~il~~v~~~Lgl~~e 332 (399)
T PLN03171 254 ESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEW-NDLFWAVHPGSSAILDQVDAALGLEPE 332 (399)
T ss_pred CCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCc-ccceEEEcCCcHHHHHHHHHHcCCCHH
Confidence 88777888777777766664 777777766666666666553 47776 888556799999999999999999999
Q ss_pred cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhc--ccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 325 KLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK--ATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 325 k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~--l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
|+..+|.++++|||++|||+|++|++++++ ++ +++|.+.|+|++++||+|++|++++|+|..
T Consensus 333 k~~~s~~~l~~yGNtssaSip~~L~~~~~~----~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~ 396 (399)
T PLN03171 333 KLAASRRVLSDYGNMFGATVIFALDELRRQ----MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASG 396 (399)
T ss_pred HhHHHHHHHHHhCcchhhhHHHHHHHHHhh----HhhcCCCCCCcceEEEEEEcccHHHHHHHhhccc
Confidence 999888899999999999999999999886 43 455522389999999999999999999964
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-54 Score=425.72 Aligned_cols=354 Identities=40% Similarity=0.695 Sum_probs=296.0
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeec--hhhhhcCCCCcCCCCCCHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLT--EEILKENPNMSCYKAPSLDAR 95 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~--~~~~~~~~~~~~~~~~~~~~~ 95 (395)
++|.++|+++|+++++|+++.+.+.........+..+++.+||.+++||++||++.+ .+.. .+ .....|++++|
T Consensus 2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~--~~--~~~~~~~~~~~ 77 (361)
T cd00831 2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETY--AP--RPEMSPSLDER 77 (361)
T ss_pred cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhc--CC--ccccCCCcCcc
Confidence 689999999999999999999987432211011334556789999999999999987 3321 00 01134788999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccchHHHHHHH
Q 016094 96 HAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYS-QGCYMGGAVIRH 174 (395)
Q Consensus 96 ~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~-~~C~s~~~al~~ 174 (395)
+..+.+.+.+|+.+|+++||+++|+++++||+||+++++++..|+++.+|+++||+++... +++++ ++|+|++.||++
T Consensus 78 ~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~-~~dv~~~~C~~~~~al~~ 156 (361)
T cd00831 78 NDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVK-RYNLGGMGCSAGAIALDL 156 (361)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccc-hhccccccchhHHHHHHH
Confidence 9999999999999999999999999999999999999988889999999999999986443 78888 899999999999
Q ss_pred HHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCC
Q 016094 175 AKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTEN 254 (395)
Q Consensus 175 A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 254 (395)
|.+++++++.++||||++|.++..+ ++.+ ++......++|||||+|+||++++.........+++.+.....+|.+.+
T Consensus 157 A~~~~~~~~~~~aLvv~~e~~s~~~-~~~d-~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 234 (361)
T cd00831 157 AKDLLEANPGARVLVVSTELCSLWY-RGPD-HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSED 234 (361)
T ss_pred HHHHHHHCCCCEEEEEEeeccccee-CCCC-cHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCC
Confidence 9999999999999999999998744 4443 1233346789999999999998765320011345666555556777766
Q ss_pred ceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhccc--CCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHH
Q 016094 255 NVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPI--GISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRY 331 (395)
Q Consensus 255 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~--g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~ 331 (395)
.+.|...+.++.+.+++++++.+.+.++++++++|+++ |++. +|| +|++||+|+++++.+++.||++++|+..+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~-~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~ 313 (361)
T cd00831 235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFK-LAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRM 313 (361)
T ss_pred ceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCcc-ccceEEEECCCChHHHHHHHHHcCCCHHHHHHHHH
Confidence 66777666677777788899999999999999999999 9997 999 9999999999999999999999999987777
Q ss_pred HHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeE
Q 016094 332 ALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVL 386 (395)
Q Consensus 332 ~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~ll 386 (395)
++++|||+++||+|++|++++++ |++++| |+|++++||+|++|+++++
T Consensus 314 ~l~~~GN~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 314 VLRRYGNMSSSSVLYVLAYMEAK----GRVKRG---DRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHhCCchhccHHHHHHHHHHh----CCCCCC---CEEEEEEEcCCceeeeeeC
Confidence 89999999999999999999998 889999 9999999999999999875
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-52 Score=377.51 Aligned_cols=350 Identities=30% Similarity=0.509 Sum_probs=310.6
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHH-hcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICE-RSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
..|.++++++|++.++|.|+.+.+..+-..+ + +|.+.+.+. ..+|++|+++.|.++. +..+++.+||
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~---~-~~~I~r~l~~~~~i~~R~~v~Pl~~y--------~e~~~f~ekN 69 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQE---G-REDIPRVLHANAQINRRHLVLPLDWY--------REPHGFGEKN 69 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhcccc---c-hHHHHHHHhhccccccceecccHhhc--------cCCCChhhhh
Confidence 5799999999999999999988875433222 2 334455555 7899999999998862 2346899999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
+.|.|.+..|.++|+++||+.+++.|+|||+|+++|+|+...|++..+|..+||+++...|......||+++..+|..|.
T Consensus 70 ~ifie~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~ 149 (356)
T COG3424 70 EIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARAR 149 (356)
T ss_pred hhHHHHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCc
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENN 255 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~ 255 (395)
.++++.+..+|||||+|.||.+|. ..++..++.+...+||||+||+|++.+... +. ....+.+.+..++.+|++++.
T Consensus 150 ~y~ra~P~~~vlvV~vELCSLt~~-~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~-~~~~p~i~~s~StL~~dse~~ 227 (356)
T COG3424 150 DYCRAAPDANVLVVCVELCSLTYV-FADDTKSNLVGTALFGDGAAAVVVSGDRRAEGK-RPLRPDILDSFSTLYPDSEDI 227 (356)
T ss_pred HHHhhCccceEEEEEeeeeeeeee-cCCCCcccceeeeeecCCeeEEEEecccccccc-CCCCceecccccccCCccccc
Confidence 999999999999999999998775 334344577788999999999999986542 21 223466777777889999999
Q ss_pred eeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHH
Q 016094 256 VVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALS 334 (395)
Q Consensus 256 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~ 334 (395)
|.|.+.++|++..++++++..+-..+...+..+|..++++. +|| .|+.|+++++++++..+.||+++|++..+|+.++
T Consensus 228 Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~-~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~ 306 (356)
T COG3424 228 MGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSI-EDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLR 306 (356)
T ss_pred cceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCch-hhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 999 9999999999999999999999999999999999
Q ss_pred hcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 335 EYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 335 ~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
+||||+||++++.|.+.+++ . .++| ++.+++++|+|++...++++|..
T Consensus 307 ~~GNMSSatvLfVL~d~l~~----~-~~~g---~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 307 EYGNMSSATVLFVLEDTLQK----A-PKSG---SRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HhCCccchhhHHHHHHHHHh----c-CCCC---cceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999997 4 5788 89999999999999999999974
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-51 Score=402.20 Aligned_cols=316 Identities=19% Similarity=0.262 Sum_probs=256.2
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
+++|.++|+|+|+++++|+++...+ ...+ . ...+++.+.+||++||++.+++.
T Consensus 7 ~~~I~~~g~~lP~~~v~~~~~~~~~---~~~~---~--~~~~~i~~~~Gi~~R~~~~~~e~------------------- 59 (353)
T PRK12880 7 KAKISGICVSVPEHKICIDDELESV---FSND---I--KTLKRMKKVIGLNTRYICDENTC------------------- 59 (353)
T ss_pred ccEEEEEEEECCCeEecHHHHHHHh---cCcc---h--hhhhhhhhccCceEEEeCCCCCC-------------------
Confidence 3889999999999999999754442 1111 0 12457888999999999876653
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
..+|+++|+++||+++|++++|||+||++|+++ +..|+++.+|+++||+++... +++++.+|+|++.||++|
T Consensus 60 ------~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~-~~di~~~C~g~~~aL~~A 132 (353)
T PRK12880 60 ------VSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTI-AFDLGQACAGYLYGLFVA 132 (353)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCce-EEehhhhhHHHHHHHHHH
Confidence 899999999999999999999999999999998 899999999999999986543 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc----eecCC
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----MTVPN 251 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----~~~p~ 251 (395)
.+++++|+.+ ||||++|.+|. +.+|.+ +....+|||||+|+||++++... ..+.+...+. ..+|.
T Consensus 133 ~~~i~~~~~~-~LVv~~e~~S~-~~~~~d-----~~~~~lFGDGAaA~vl~~~~~~~----~~~~~~~~~~~~~~~~~p~ 201 (353)
T PRK12880 133 HSLIQSGLGK-ILLICGDTLSK-FIHPKN-----MNLAPIFGDGVSATLIEKTDFNE----AFFELGSDGKYFDKLIIPK 201 (353)
T ss_pred HHHHHcCCCC-EEEEEehhhhc-cCCccc-----CCceeeecccceEEEEEecCCCC----ceEEEEecCCCCCeEEecC
Confidence 9999999888 99999999997 445543 23568999999999999765321 1244444332 23343
Q ss_pred CCCc-eeeeEec-----------CceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHH
Q 016094 252 TENN-VVGHLKE-----------MGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQ 317 (395)
Q Consensus 252 ~~~~-~~~~~~~-----------~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~ 317 (395)
.... ..|.... ....+.+ ++.+|+++.+.++++++++|+++|++. +|| +|++||+|+++++.+++
T Consensus 202 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~HQ~~~~i~~~i~~ 280 (353)
T PRK12880 202 GAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDE-KDIAFHLFHQSNAYLVDCIKE 280 (353)
T ss_pred CCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHH
Confidence 3211 1111100 0113445 789999999999999999999999997 999 99999999999999999
Q ss_pred HcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 318 NLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 318 ~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
+||+|++|+... ++++|||++||++|++|++++++ ++ -++++++||+|++|+++++||.+.
T Consensus 281 ~Lgl~~ek~~~~--~l~~~GNtssasip~~L~~~~~~----~~-------~~~ll~~~G~G~s~g~~ll~~~~~ 341 (353)
T PRK12880 281 ELKLNDDKVPNF--IMEKYANLSACSLPALLCELDTP----KE-------FKASLSAFGAGLSWGSAVLNFKDL 341 (353)
T ss_pred HhCCCHHHhhhh--hHHhhCCHHHHHHHHHHHHHHHc----CC-------cEEEEEEEchhhhheEeEEEECCc
Confidence 999999998643 58999999999999999999876 33 458999999999999999999765
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-51 Score=397.62 Aligned_cols=313 Identities=19% Similarity=0.207 Sum_probs=255.8
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+|+.+.+. .. .+++.+++||++||++.+++.
T Consensus 4 ~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~e~-------------------- 51 (326)
T PRK05963 4 SRIAGFGHAVPDRRVENAEIEAQLG---LE---------TGWIERRTGIRCRRWAAPDET-------------------- 51 (326)
T ss_pred cEEEEEEEECCCCeecHHHHHHHcC---CC---------HHHhhhccCCeEEEEcCCCCC--------------------
Confidence 7999999999999999999988741 11 357889999999999876663
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
+.+|+++|+++||+++|+++++||+||++|+++ +..|+.+.+|+++||+++.. +++++++|+|++.||++|.
T Consensus 52 -----~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~--~~di~~~C~g~~~aL~~A~ 124 (326)
T PRK05963 52 -----LSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSG--AIDLAGACAGFLYALVLAD 124 (326)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCc--eeeccchhhHHHHHHHHHH
Confidence 899999999999999999999999999999998 78999999999999998765 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecce----ecCCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM----TVPNT 252 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~----~~p~~ 252 (395)
++|+++ .++||||++|.++. +.++. ++...++|||||+|+||++++....+. ....+...+.. ..|..
T Consensus 125 ~~l~~~-~~~aLVv~~d~~s~-~~~~~-----~~~~~~lfGDgA~A~ll~~~~~~~~~~-l~~~~~t~~~~~~~~~~~~g 196 (326)
T PRK05963 125 GFVRAQ-GKPVLVVAANILSR-RINMA-----ERASAVLFADAAGAVVLAPSAKANSGV-LGSQLISDGSHYDLIKIPAG 196 (326)
T ss_pred HHHHcC-CCeEEEEEechhhc-cCCcc-----ccCceEEEeecceEEEEEecCCCCCce-EEEEEEEcCCCCCeEEeCCC
Confidence 999998 49999999999886 33443 234578999999999999876431100 01222222110 12221
Q ss_pred CCceeee--EecCceeEE--eCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccch
Q 016094 253 ENNVVGH--LKEMGWDYT--LSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLG 327 (395)
Q Consensus 253 ~~~~~~~--~~~~g~~~~--~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~ 327 (395)
.....+. .......+. .++.+++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+.+.||+|++|+.
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~l~l~~~k~~ 275 (326)
T PRK05963 197 GSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTP-QDIDRFFPHQANARIVDKVCETIGIPRAKAA 275 (326)
T ss_pred CcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCHHHhh
Confidence 1111110 011111222 2577888888899999999999999998 999 999999999999999999999999987
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 328 ASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 328 ~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
. ++++|||+++||+|++|++++++ +++++| |+|++++||+|++|+++++||
T Consensus 276 ~---~l~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 276 S---TLETYGNSSAATIPLSLSLANLE----QPLREG---ERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred h---hHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEehhhhheeeEEeC
Confidence 6 59999999999999999999988 889999 999999999999999999997
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-51 Score=401.00 Aligned_cols=314 Identities=22% Similarity=0.285 Sum_probs=256.6
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.|+|+|+|+++++|+++.+.+. .. ..+|.+++||++||++.+++.
T Consensus 48 ~~I~g~g~~lP~~~v~n~el~~~~~---~~---------~~~i~~~tGi~~R~~~~~~~~-------------------- 95 (379)
T PLN02326 48 SKLVGCGSAVPKLLITNDDLSKLVD---TS---------DEWIATRTGIRNRRVLSGDET-------------------- 95 (379)
T ss_pred cEEEEEEEECCCceecHHHHHHhcC---Cc---------hhheecccCcceEeecCCCCC--------------------
Confidence 8999999999999999999988742 11 357899999999999876663
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ 177 (395)
..+|+.+|+++||+++|++++|||+||++++++...+..+..+++.||+++.. +++++++|+|++.||++|.+
T Consensus 96 -----~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~~~--~~dv~~~Ca~~~~aL~~A~~ 168 (379)
T PLN02326 96 -----LTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNAL--AFDLTAACSGFVLGLVTAAR 168 (379)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCCCc--eeeccccchHHHHHHHHHHH
Confidence 89999999999999999999999999999988744456788999999998655 78999999999999999999
Q ss_pred HHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecce----e--cCC
Q 016094 178 IAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM----T--VPN 251 (395)
Q Consensus 178 ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~----~--~p~ 251 (395)
+|++|..++||||++|.++. +.++.+ +....+|||||+|+||++++.... ....+.+.+.+.. . .+.
T Consensus 169 ~l~~g~~~~vLVv~~e~~s~-~~~~~d-----~~~~~lfGDGAaAvlL~~~~~~~~-~i~~~~~~t~g~~~~~~~~~~~g 241 (379)
T PLN02326 169 FIRGGGYKNVLVIGADALSR-YVDWTD-----RGTCILFGDGAGAVVLQACDDDED-GLLGFDMHSDGNGHKHLHATFKG 241 (379)
T ss_pred HHHcCCCCEEEEEEechhcC-CCCccc-----cCceEEEcceeEEEEEEEcCCCCC-ceEEEEEEEcCCCCCeEEecCCC
Confidence 99999999999999999886 544432 334579999999999998764310 0012333332210 0 111
Q ss_pred CC---------CceeeeEecCce-eEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHc
Q 016094 252 TE---------NNVVGHLKEMGW-DYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNL 319 (395)
Q Consensus 252 ~~---------~~~~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~l 319 (395)
.. ....+.....++ .+.+ ++++++++.+.++++++++|+++|++. +|| +|++||+|+++++.+++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~~~~~L 320 (379)
T PLN02326 242 EDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTA-ESIDWLLLHQANQRIIDAVAQRL 320 (379)
T ss_pred CcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHc
Confidence 10 000111111122 2445 678999888999999999999999997 999 9999999999999999999
Q ss_pred CCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 320 GLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 320 gi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
|+++||+..+ +++|||+++||+|++|++++++ |++++| |+||+++||+|++|++++++|
T Consensus 321 gl~~ek~~~~---l~~~GNt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 321 GIPPEKVISN---LANYGNTSAASIPLALDEAVRS----GKVKKG---DVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred CCCHHHeeec---HhhcCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhheeeEEEEEC
Confidence 9999999864 8999999999999999999998 889999 999999999999999999997
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-50 Score=391.53 Aligned_cols=313 Identities=18% Similarity=0.236 Sum_probs=255.9
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
.++|.++|+|+|+++++|+++.+.+. .. .+|+.+++||++||++. ++.
T Consensus 4 ~~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~R~~~~-~~~------------------- 51 (329)
T PRK07204 4 YISIKGIGTYLPKRKVDSLELDKKLD---LP---------EGWVLKKSGVKTRHFVD-GET------------------- 51 (329)
T ss_pred CcEEEEEEEeCCCceecHHHHHHhhC---CC---------HhHhhhccCceEEeecC-CCC-------------------
Confidence 38999999999999999999988642 11 25788999999999986 442
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCc-cccceeeccccchHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPS-VNRLMIYSQGCYMGGAVIRH 174 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~-~~~~~~i~~~C~s~~~al~~ 174 (395)
..+|+.+|+++||+++|++++|||+||++++++ +..|+.+.+|+++||+++. .. +++++.+|+|++.||.+
T Consensus 52 ------~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~-~~~v~~~C~~~~~al~~ 124 (329)
T PRK07204 52 ------SSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIP-CFDINSTCLSFITALDT 124 (329)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCce-EEEccchhHHHHHHHHH
Confidence 889999999999999999999999999999888 6689999999999999863 22 88999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecc----eec
Q 016094 175 AKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQ----MTV 249 (395)
Q Consensus 175 A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~----~~~ 249 (395)
|.+++++|..++||||++|.++. +.++. ++.+.++|||||+|+||++++.. .+ ....+...+. ..+
T Consensus 125 a~~~l~~g~~~~~Lvv~~e~~s~-~~~~~-----~~~~~~lfGDGAaA~ll~~~~~~~~i---l~~~~~t~~~~~~~~~~ 195 (329)
T PRK07204 125 ISYAIECGRYKRVLIISSEISSV-GLNWG-----QNESCILFGDGAAAVVITKGDHSSRI---LASHMETYSSGAHLSEI 195 (329)
T ss_pred HHHHHHCCCCCEEEEEEeccccC-CCCcc-----cCcceEEEecccEEEEEEEcCCCCcE---EEEEEEEecCCCCceEE
Confidence 99999999999999999999886 33332 22356899999999999987643 11 0111111110 001
Q ss_pred CCCCCc----eeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCc
Q 016094 250 PNTENN----VVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGK 323 (395)
Q Consensus 250 p~~~~~----~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ 323 (395)
|..... ..+.....++.+.+ ++++++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.|++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~H~~~~~~~~~i~~~l~l~~ 274 (329)
T PRK07204 196 RGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTL-ADIDLIVPHQASGPAMRLIRKKLGVDE 274 (329)
T ss_pred ecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCH
Confidence 111000 01111222334555 678899899999999999999999997 999 99999999999999999999999
Q ss_pred ccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 324 EKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 324 ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
||+.. ++++|||++++|+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 275 e~~~~---~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 275 ERFVT---IFEDHGNMIAASIPVALFEAIKQ----KKVQRG---NKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HHhhh---hHhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeEEeC
Confidence 99875 59999999999999999999998 889999 999999999999999999986
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-50 Score=389.96 Aligned_cols=313 Identities=24% Similarity=0.329 Sum_probs=254.2
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+|+++.+. .. ..+|.+++||++||++.+++.
T Consensus 3 v~I~~~g~~lP~~~v~~~e~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~~-------------------- 50 (326)
T CHL00203 3 VHILSTGSSVPNFSVENQQFEDIIE---TS---------DHWISTRTGIKKRHLAPSSTS-------------------- 50 (326)
T ss_pred cEEEEEEEECCCeEEcHHHHHHhcC---CC---------hhhEeeccCeEEEEeCCCCCC--------------------
Confidence 7899999999999999999998752 11 247889999999999876653
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ 177 (395)
..+|+.+|+++||+++|+++++||.||++++++...+..+..+++.||+.+.+ +++++++|+|++.||++|.+
T Consensus 51 -----~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~--~~~v~~~Casg~~al~~A~~ 123 (326)
T CHL00203 51 -----LTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAV--AFDITAACSGFILALVTATQ 123 (326)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCc--eeeecccchhHHHHHHHHHH
Confidence 89999999999999999999999999999888733345578999999998765 78999999999999999999
Q ss_pred HHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecce----ecCCC-
Q 016094 178 IAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM----TVPNT- 252 (395)
Q Consensus 178 ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~----~~p~~- 252 (395)
+|++|..+++|||++|.++. +.++.+ +...++|||||+|+||++.+..++ ..+.+...+.. .++..
T Consensus 124 ~i~sg~~~~~Lvv~~e~~s~-~~~~~~-----~~~~~~fgDga~A~ll~~~~~~~~---~~~~~~t~g~~~~~~~~~~~~ 194 (326)
T CHL00203 124 FIQNGSYKNILVVGADTLSK-WIDWSD-----RKTCILFGDGAGAAIIGASYENSI---LGFKLCTDGKLNSHLQLMNKP 194 (326)
T ss_pred HHHcCCCCEEEEEEehhhhC-cCCccc-----CCceEEEcceeeEEEEEEcCCCCe---EEEEEEEcCCCcceEEecCCC
Confidence 99999999999999999987 434443 235689999999999998665321 12222222210 11100
Q ss_pred --CCceeeeEecC-ce-eEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccc
Q 016094 253 --ENNVVGHLKEM-GW-DYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKL 326 (395)
Q Consensus 253 --~~~~~~~~~~~-g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~ 326 (395)
.........++ .+ .+.+ +++++++..+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|+||+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~hq~~~~~~~~~~~~lgl~~~k~ 273 (326)
T CHL00203 195 VNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI-DEVDWFILHQANKRILEAIANRLSVPNSKM 273 (326)
T ss_pred CCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHh
Confidence 00000000011 11 2334 677888877889999999999999997 999 99999999999999999999999999
Q ss_pred hHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEec
Q 016094 327 GASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 327 ~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
.. ++++|||++||++|++|++++++ |++++| |+|++++||+|++|+++++||+
T Consensus 274 ~~---~l~~~Gn~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 274 IT---NLEKYGNTSAASIPLALDEAIQN----NKIQPG---QIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred hh---HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence 76 59999999999999999999998 889999 9999999999999999999995
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-49 Score=384.22 Aligned_cols=313 Identities=20% Similarity=0.261 Sum_probs=256.0
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++++|+.+... .. .+++++++||++||++.+++.
T Consensus 5 ~~I~~ig~~~P~~~v~~~e~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~~~-------------------- 52 (325)
T PRK12879 5 ARITGIGTYVPPRVLTNDDLETFID---TS---------DEWIVQRTGIKERRIAHVEEY-------------------- 52 (325)
T ss_pred CEEEEEEEECCCcEEcHHHHHHhcC---CC---------HHHhhhccCceEEEECCCCCC--------------------
Confidence 8899999999999999999998642 11 256888999999999876663
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+|++.||+++.+ +++++++|+|++.||.+|.
T Consensus 53 -----~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~--~~~v~~~C~~~~~al~~A~ 125 (325)
T PRK12879 53 -----TSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAA--AFDINAACAGFLYGLETAN 125 (325)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--EEEECccchHHHHHHHHHH
Confidence 899999999999999999999999999999887 77899999999999998755 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecc----eecCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQ----MTVPN 251 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~----~~~p~ 251 (395)
++|++|+.++||||++|.++. +.++.+ +...++|||||+|+||++++.. ++ ....+...+. ...+.
T Consensus 126 ~~l~~g~~~~~Lvv~~e~~s~-~~~~~~-----~~~~~~~GDgAaA~ll~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 196 (325)
T PRK12879 126 GLITSGLYKKVLVIGAERLSK-VTDYTD-----RTTCILFGDGAGAVVLEATENEPGF---IDYVLGTDGDGGDILYRTG 196 (325)
T ss_pred HHHHcCCCCEEEEEEehhhcC-cCCccc-----cCceEEEeecceEEEEEecCCCCCe---EEEEEEEcCCCCCeEEEcC
Confidence 999999999999999999886 333322 2345799999999999997753 11 0111111110 00111
Q ss_pred CCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHH
Q 016094 252 TENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGAS 329 (395)
Q Consensus 252 ~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~ 329 (395)
............+..+.+ ++++++...+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||++++|++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~- 274 (325)
T PRK12879 197 LGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTK-DDIDWVIPHQANLRIIESLCEKLGIPMEKTLV- 274 (325)
T ss_pred CCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHhhh-
Confidence 100000000111223344 577888888899999999999999997 999 9999999999999999999999999886
Q ss_pred HHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEec
Q 016094 330 RYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 330 ~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
++++|||+++||+|++|++++++ |++++| |+|++++||+|++|+++++||+
T Consensus 275 --~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 275 --SVEYYGNTSAATIPLALDLALEQ----GKIKPG---DTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred --hHhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEeC
Confidence 48999999999999999999998 889999 9999999999999999999995
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=387.49 Aligned_cols=322 Identities=18% Similarity=0.160 Sum_probs=256.8
Q ss_pred CceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHH
Q 016094 16 PSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDAR 95 (395)
Q Consensus 16 ~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
++++|.++|+|+|+++++|+++.+.+.+...... ....++.+.+||++||+..++++
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~-----~~~~~i~~~~Gi~~R~~~~~~~~------------------ 60 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLR-----LPPGQLEALTGIRERRWWPEGTQ------------------ 60 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccC-----CChhHhhhhcCceeEecCCCCCC------------------
Confidence 3489999999999999999999987532211000 01256788899999999755442
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHH
Q 016094 96 HAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRH 174 (395)
Q Consensus 96 ~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~ 174 (395)
..+|+.+|+++||+++|+++++||+||++++++ +..|+.+.+++++||+++... .++++++|+|++.||++
T Consensus 61 -------~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~-~~~v~~~C~~~~~al~~ 132 (338)
T PRK09258 61 -------LSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCA-NFDVSNACLGFLNGMLD 132 (338)
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCc-eeehhhhhHHHHHHHHH
Confidence 889999999999999999999999999999987 788999999999999985433 78999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEecccccccCCCC------ch----hhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEee
Q 016094 175 AKDIAENNPGARVLVVCCDITVLHFHEPT------EA----RLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSC 244 (395)
Q Consensus 175 A~~ll~~g~~~~vLvv~~e~~s~~~~~~~------~~----~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~ 244 (395)
|.++|++|..++|||+++|.++..+ ++. +. .+......++|||||+|+||++++.... .+.+...
T Consensus 133 A~~~i~~g~~~~~Lvv~~e~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~----~~~~~~~ 207 (338)
T PRK09258 133 AANMIELGQIDYALVVSGESAREIV-EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPR----GHRLLGG 207 (338)
T ss_pred HHHHHHcCCCCEEEEEEecccchhc-cchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCC----cceeeee
Confidence 9999999999999999999987632 221 10 0111123578999999999998654211 1334332
Q ss_pred cceecCCCCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCC
Q 016094 245 SQMTVPNTENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLG 322 (395)
Q Consensus 245 ~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~ 322 (395)
.....+...+.+.|. ...+.+ ++++++...+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|
T Consensus 208 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~-~did~~i~H~~~~~~~~~~~~~lgl~ 282 (338)
T PRK09258 208 VTRAATEHHELCQGG----RDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAV-EQVDRVICHQVGAAHTRAILKALGID 282 (338)
T ss_pred eeecCCCcccccccC----ccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEecCCCCHHHHHHHHHHhCCC
Confidence 222233322212221 112333 466777777888899999999999997 999 9999999999999999999999
Q ss_pred cccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 323 KEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 323 ~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
++|++.+ +++||||+++|+|++|++++++ |++++| |+|++++||+|++|+++++||
T Consensus 283 ~~k~~~~---~~~~GN~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 283 PEKVFTT---FPTLGNMGPASLPITLAMAAEE----GFLKPG---DRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred HHHceeh---HhhhCCcHHhHHHHHHHHHHHh----CCCCCC---CEEEEEEechhHhhHhHeeeC
Confidence 9999875 8999999999999999999988 889999 999999999999999999997
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-48 Score=373.96 Aligned_cols=306 Identities=22% Similarity=0.294 Sum_probs=253.1
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++++++.+.+. . . .+++.+++||++||++.+++.
T Consensus 2 ~~I~~i~~~lP~~~~~~~~~~~~~~-~--~---------~~~~~~~~Gi~~r~~~~~~~~-------------------- 49 (320)
T cd00830 2 ARILGIGSYLPERVVTNDELEKRLD-T--S---------DEWIRTRTGIRERRIADPGET-------------------- 49 (320)
T ss_pred CEEEEEEEECCCcEEcHHHHHHHcC-C--C---------HHHhhhccCceEEeeCCCCCC--------------------
Confidence 7899999999999999999988751 1 1 356788999999999976553
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
+.+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+|+..||+++.+ +++++++|++++.||.+|.
T Consensus 50 -----~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~--~~~v~~~C~s~~~al~~A~ 122 (320)
T cd00830 50 -----TSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAA--AFDINAACSGFLYGLSTAA 122 (320)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EeeccccchHHHHHHHHHH
Confidence 899999999999999999999999999999887 66899999999999998555 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCce
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNV 256 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 256 (395)
++|++|+.++|||+++|.++..+ ++. ++...++|||||+|+||++++... .+........+...+.+
T Consensus 123 ~~i~~g~~~~vLvv~~e~~s~~~-~~~-----~~~~~~~~GDgAaA~ll~~~~~~~-------~i~~~~~~~~~~~~~~~ 189 (320)
T cd00830 123 GLIRSGGAKNVLVVGAETLSRIL-DWT-----DRSTAVLFGDGAGAVVLEATEEDP-------GILDSVLGSDGSGADLL 189 (320)
T ss_pred HHHHcCCCCEEEEEEehhhcccc-Ccc-----cCCceEEEeccceEEEEEecCCCC-------cEEEEEEEEcCCCCCeE
Confidence 99999999999999999988633 332 223568999999999999976521 11111111122222211
Q ss_pred eeeE----------ecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc
Q 016094 257 VGHL----------KEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE 324 (395)
Q Consensus 257 ~~~~----------~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e 324 (395)
.|.. ...+..+.+ ++++++...+.++++++++|+++|+++ +|| +|++||++.++++.+++.||+|++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgl~~~ 268 (320)
T cd00830 190 TIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTP-DDIDWFVPHQANLRIIEAVAKRLGLPEE 268 (320)
T ss_pred EeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHH
Confidence 1110 111123334 778888888889999999999999997 999 999999999999999999999999
Q ss_pred cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeE
Q 016094 325 KLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVL 386 (395)
Q Consensus 325 k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~ll 386 (395)
|+.. ++++|||+++||+|++|++++++ +++++| |+|+++++|+|++|+++++
T Consensus 269 ~~~~---~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 269 KVVV---NLDRYGNTSAASIPLALDEAIEE----GKLKKG---DLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred Hhhh---hHHhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchHHhhHHhhC
Confidence 9875 59999999999999999999998 889999 9999999999999999875
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-47 Score=376.56 Aligned_cols=354 Identities=19% Similarity=0.250 Sum_probs=272.7
Q ss_pred CCCceEEEeeeecCCCC--cccccchHHHHHhh---cC-CcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCC
Q 016094 14 RGPSAKILAIGTATPPN--CFYQADYPDFFFRV---TN-SEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCY 87 (395)
Q Consensus 14 ~~~~v~I~~ig~~lP~~--~i~~~~~~~~~~~~---~~-~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~ 87 (395)
+++ |+++..++|.|+. +++.+.+.+..... .. ++..++..+.++||.+++||.+|++..+...
T Consensus 65 ~~~-vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~---------- 133 (478)
T PLN02932 65 PKP-VYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQ---------- 133 (478)
T ss_pred CCc-EEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccc----------
Confidence 667 9999999999985 88999988876433 11 2222344567899999999999998854431
Q ss_pred CCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccc
Q 016094 88 KAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYS-QGCY 166 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~-~~C~ 166 (395)
. .+++++++.+++...+|+.+|+++||+++|++|+|||+||++|+++...|+++.+|+++||+++... .++++ +||+
T Consensus 134 ~-~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~-~fdL~gmGCS 211 (478)
T PLN02932 134 C-LPLQQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIK-SLNLGGMGCS 211 (478)
T ss_pred c-CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCce-EEEeccchhh
Confidence 1 2378899999999999999999999999999999999999999999889999999999999985554 78888 8999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc
Q 016094 167 MGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ 246 (395)
Q Consensus 167 s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~ 246 (395)
+++.+|++|.+++++++.++||||++|.+|.++ ++.+ ++..+.++.+|||||+|+||++.+... ....+++.+...
T Consensus 212 ggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~r~~l~t~~LFgDGAAAvlLs~~~~~~--~~~~~~L~~~v~ 287 (478)
T PLN02932 212 AGVIAIDAAKSLLQVHRNTYALVVSTENITQNL-YLGN-NKSMLVTNCLFRIGGAAILLSNRSRDR--KRAKYELVHTVR 287 (478)
T ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEEeeccccc-CCCc-chhhhccceeecccceEEEEecccccc--cCcceEEEeeee
Confidence 999999999999999999999999999999754 3433 233456789999999999999865321 113566764433
Q ss_pred ee---cCCCCCceeeeEecCce-eEEeCCcchHHHHHhHHHHH----------------------HHhhccc--CCCC--
Q 016094 247 MT---VPNTENNVVGHLKEMGW-DYTLSKDLPVIIGKYIDKLL----------------------ADAMSPI--GISD-- 296 (395)
Q Consensus 247 ~~---~p~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~~--g~~~-- 296 (395)
.+ .+.+.+.+.+...+.|. .+.++++++..+.+.++..+ +++++.. ++.+
T Consensus 288 t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~ 367 (478)
T PLN02932 288 VHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDF 367 (478)
T ss_pred eeeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhH
Confidence 32 22222223333333443 45556666655443333111 1222211 2221
Q ss_pred CCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEE
Q 016094 297 WNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGF 375 (395)
Q Consensus 297 ~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~ 375 (395)
..+| +|++||+|+++++.+++.||++++++..++.++++||||+|+|+|+.|+++.++ |++++| |+|++++|
T Consensus 368 ~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~----grik~G---d~vl~iaF 440 (478)
T PLN02932 368 KLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAK----GRMKKG---DRIWQIAL 440 (478)
T ss_pred HhhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHc----CCCCCC---CEEEEEEE
Confidence 1457 999999999999999999999997776666789999999999999999999887 889999 99999999
Q ss_pred cccceeeeeeEEeccC
Q 016094 376 GPGITVETVVLRSIPI 391 (395)
Q Consensus 376 G~G~~~~a~llr~~~~ 391 (395)
|+|++|+++++|....
T Consensus 441 GsGf~~~s~vw~~~~~ 456 (478)
T PLN02932 441 GSGFKCNSSVWVALRN 456 (478)
T ss_pred eccHHHHHHHHHHhcC
Confidence 9999999999987644
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-48 Score=370.92 Aligned_cols=310 Identities=21% Similarity=0.275 Sum_probs=255.7
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++++++.+.+. .. ..++.+++||++||++.+++.
T Consensus 3 ~~I~~i~~~~P~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~~-------------------- 50 (318)
T TIGR00747 3 AGILGTGSYLPEKVLTNADLEKMVD---TS---------DEWIVTRTGIKERRIAADDET-------------------- 50 (318)
T ss_pred CEEEEEEEECCCceecHHHHHHhcC---Cc---------hHHeecccCceEEEECCCCCC--------------------
Confidence 7899999999999999999988742 11 246788899999999876663
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
+.+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.++++.||+++.+ +++++++|++++.||++|.
T Consensus 51 -----~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~--~~~v~~~C~s~~~al~~A~ 123 (318)
T TIGR00747 51 -----SSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIP--AFDLSAACAGFIYALSVAK 123 (318)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCc--EeehhhhhHHHHHHHHHHH
Confidence 899999999999999999999999999999888 67888999999999998755 7889999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc----eecCCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----MTVPNT 252 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----~~~p~~ 252 (395)
++|++|..+++||+++|.++. +.++.+ +....+|||||+|+||++++... ....+.+...+. ..+|..
T Consensus 124 ~~i~~g~~~~~Lvv~~e~~~~-~~~~~~-----~~~~~~~GDGAaA~lL~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~ 195 (318)
T TIGR00747 124 QYIESGKYKTVLVVGAEKLSS-TLDWTD-----RGTCVLFGDGAGAVVLGESEDPG--GIISTHLGADGTQGEALYLPAG 195 (318)
T ss_pred HHHHcCCCCEEEEEEehhhcC-cCCcCC-----CCeEEEEecceeEEEEeecCCCC--cEEEEEEEEcCCCcceEEECCC
Confidence 999999999999999999876 333332 22357899999999999977542 001223322221 112221
Q ss_pred CCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHH
Q 016094 253 ENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRY 331 (395)
Q Consensus 253 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~ 331 (395)
... .....++....++++++...+.+.++++++|+++|+++ +|| +|++||++.++++.+++.||+|++|++.
T Consensus 196 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~--- 268 (318)
T TIGR00747 196 GRP---TSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDP-EDIDWFVPHQANLRIIEALAKRLELDMSQVVK--- 268 (318)
T ss_pred CcC---CCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHeee---
Confidence 110 01112222333677888888889999999999999997 999 9999999999999999999999999986
Q ss_pred HHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 332 ALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 332 ~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
++++|||+++||+|++|++++++ |++++| |+|+++++|+|++|++++|||
T Consensus 269 ~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 269 TVHKYGNTSAASIPLALDELLRT----GRIKPG---DLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred hHhhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeeEEEEEC
Confidence 49999999999999999999998 889999 999999999999999999997
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-47 Score=368.21 Aligned_cols=316 Identities=17% Similarity=0.133 Sum_probs=244.2
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+. .. .+++.+++||++||++.++++
T Consensus 5 v~I~~~~~~lP~~~v~~~~l~~~~g---~~---------~~~~~~~~Gi~~r~~~~~~~~-------------------- 52 (339)
T PRK06840 5 VGIVGTGVYLPKDVMTAEEIAEKTG---IP---------EEVVIEKFGIYEKPVPGPEDH-------------------- 52 (339)
T ss_pred eEEEEEEEeCCCcccCHHHHHHHhC---CC---------HHHHhhhcCcceEeeCCCCCC--------------------
Confidence 8999999999999999999987642 11 256778899999999876553
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC-C-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVY-G-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~-~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
..+|+.+|+++||+++|++|++||+||+++++ + +..|+.+.+|+++||+++.+ +++++++|++++.||.+|
T Consensus 53 -----~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~~~--~~~v~~~C~~~~~al~~A 125 (339)
T PRK06840 53 -----TSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKNAW--AFDIMAVCASFPIALKVA 125 (339)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCCcc--cccccccchHHHHHHHHH
Confidence 89999999999999999999999999987654 4 56889999999999998655 788999999999999999
Q ss_pred HHHHHc-CCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc----eecC
Q 016094 176 KDIAEN-NPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----MTVP 250 (395)
Q Consensus 176 ~~ll~~-g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----~~~p 250 (395)
.++|++ |..+++|||++|..+. +.++.+. ... ..++|||||+|+||++++.... -....+...+. ..+|
T Consensus 126 ~~~l~~~g~~~~~Lvv~~~~~s~-~~~~~~~--~~~-~~~~~GDgAaA~ll~~~~~~~~--il~~~~~t~~~~~~~~~~~ 199 (339)
T PRK06840 126 KDLLYSDPSIENVLLVGGYRNSD-LVDYDNP--RTR-FMFNFAAGGSAALLKKDAGKNR--ILGSAIITDGSFSEDVRVP 199 (339)
T ss_pred HHHHhcCCCccEEEEEeeccccc-ccCcCCC--Cee-eeccCCCceeEEEEEecCCCCc--eEEEEEEEcCCccceEEec
Confidence 999999 7889999999999876 4343221 110 1135799999999998764310 00111111111 0112
Q ss_pred CCC--CceeeeEecCc-eeEEe-CCcchHH-----HHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcC
Q 016094 251 NTE--NNVVGHLKEMG-WDYTL-SKDLPVI-----IGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLG 320 (395)
Q Consensus 251 ~~~--~~~~~~~~~~g-~~~~~-~~~v~~~-----~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lg 320 (395)
... ..........+ +.+.+ +++.++. ....++++++++|+++|+++ +|| +|++||.|.++++.+++.||
T Consensus 200 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~Lg 278 (339)
T PRK06840 200 AGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYTP-KDIDYLAILHMKRSAHIALLEGLG 278 (339)
T ss_pred CCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCcCHHHHHHHHHHcC
Confidence 110 00000000111 12222 3444432 23457789999999999998 999 99999999999999999999
Q ss_pred CCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 321 LGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 321 i~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
+|++|+. ++++||||+++++|++|.+++++ +++++| |++++++||+|++|+++++||.+
T Consensus 279 l~~~~~~----~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~ill~~~G~G~s~~~~~l~~~~ 337 (339)
T PRK06840 279 LTEEQAI----YLDEYGHLGQLDQILSLHLALEQ----GKLKDG---DLVVLVSAGTGYTWAATVIRWGP 337 (339)
T ss_pred CCHHHeE----eHHhccchhhhhHHHHHHHHHHc----CCCCCC---CEEEEEEEehhhheeEEEEEecC
Confidence 9999985 38999999999999999999988 889999 99999999999999999999975
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-47 Score=364.72 Aligned_cols=310 Identities=22% Similarity=0.308 Sum_probs=255.1
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
.++|.++|+|+|+++++++++.+... .. ..++.+++||++|+++.+++.
T Consensus 3 ~v~I~ai~~~lP~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~~------------------- 51 (319)
T PRK09352 3 YAKILGTGSYLPERVVTNDDLEKMVD---TS---------DEWIVTRTGIKERRIAAPDET------------------- 51 (319)
T ss_pred ceEEEEEEEECCCeEEcHHHHHHHcC---CC---------HHHhhhhcCeEEEEeCCCCCC-------------------
Confidence 38899999999999999999998742 11 246778899999999876653
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
..+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.+|+..||+.+.+ .+.++++|++++.||..|
T Consensus 52 ------~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~--~~~v~~~Casg~~al~~A 123 (319)
T PRK09352 52 ------TSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAA--AFDLSAACSGFVYALSTA 123 (319)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCc--EeeccccchhHHHHHHHH
Confidence 899999999999999999999999999999887 56888899999999997655 788899999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecce----ecCC
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM----TVPN 251 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~----~~p~ 251 (395)
.++|++|.+++|||+++|.++..+ ++.+ +...++|||||+|+||++++..++ ..+++...+.. ..|.
T Consensus 124 ~~~i~~g~~~~vLvv~~e~~s~~~-~~~~-----~~~~~~~gDGaaA~ll~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 194 (319)
T PRK09352 124 DQFIRSGAYKNVLVIGAEKLSRIV-DWTD-----RSTCVLFGDGAGAVVLGASEEPGI---LSTHLGSDGSYGDLLYLPG 194 (319)
T ss_pred HHHHHcCCCCEEEEEEehhhcccc-Cccc-----CCceEEEeccceEEEEEEcCCCCe---EEEEEEEcCCCCCeEEeCC
Confidence 999999999999999999988633 3322 224579999999999999875321 12333332221 1222
Q ss_pred CCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHH
Q 016094 252 TENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGAS 329 (395)
Q Consensus 252 ~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~ 329 (395)
......+. .+ .+.+ ++++++...+.+.++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++++..
T Consensus 195 ~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~- 268 (319)
T PRK09352 195 GGSRGPAS---PG-YLRMEGREVFKFAVRELAKVAREALEAAGLTP-EDIDWLVPHQANLRIIDATAKKLGLPMEKVVV- 268 (319)
T ss_pred CCCCCCCC---CC-ceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh-
Confidence 21111000 11 1233 567788888889999999999999997 999 9999999999999999999999999865
Q ss_pred HHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEec
Q 016094 330 RYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 330 ~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
++++|||+++||+|++|++++++ |++++| |++++++||+|++|++++|||+
T Consensus 269 --~~~~~Gn~~~a~~~~~L~~~~~~----g~~~~G---d~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 269 --TVDKYGNTSAASIPLALDEAVRD----GRIKRG---DLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred --hHHhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeC
Confidence 58999999999999999999998 889999 9999999999999999999995
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-47 Score=371.73 Aligned_cols=330 Identities=16% Similarity=0.216 Sum_probs=253.8
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
+++|.++|+|+|+++++|+++.+.+.... +. ++ ...+|+++++||++||++.+.+. .+..
T Consensus 2 ~v~I~gig~~lP~~~v~n~~~~~~~~~~~--~~-~~--~~~~~i~~~~Gi~~R~~~~~~~~---~~~~------------ 61 (378)
T PRK06816 2 NVYITSTGAFLPGEPVSNDEMEAYLGLIN--GK-PS--RARRIILRNNGIKTRHYALDPEG---RPTH------------ 61 (378)
T ss_pred CeEEEeeeecCCCCccCHHHHHHHHhhcc--CC-cH--HHHHHHHHhCCCceEEEEECCCC---CCCC------------
Confidence 38999999999999999999988764321 11 11 12358999999999999875421 1111
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
+..+|+.+|+++||+++|++++|||+||++++++ +..|+.+..|++.||+++.+ +++++.+|+|++.||++|
T Consensus 62 -----~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~--~~~v~~~Cas~~~al~~A 134 (378)
T PRK06816 62 -----SNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIE--VVSSAGVCAAGMMALKYA 134 (378)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCc--eeeecCcCHHHHHHHHHH
Confidence 2789999999999999999999999999999888 77898889999999998765 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchh----------------hhhhhhhhhhccccEEEEEecCCCC-CCCCCCc
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEAR----------------LDMLVGQAIFGDGAAAAIIGADPDV-SLNERPL 238 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~----------------~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~ 238 (395)
.++|++|+.++||||++|.+|..+ ++.+.. ++....+++|||||+|+||++.+.. +. .
T Consensus 135 ~~~i~sg~~~~vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~----~ 209 (378)
T PRK06816 135 YLSVKAGESRNAVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGL----S 209 (378)
T ss_pred HHHHHCCCCCEEEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCc----e
Confidence 999999999999999999998633 332100 0111124579999999999986652 21 1
Q ss_pred eEE--Eeecce------ec-CCCC-----CceeeeEe------cCc-eeEEe-CCcchHHHHHhHHHHHHHhhcccCCCC
Q 016094 239 FQV--LSCSQM------TV-PNTE-----NNVVGHLK------EMG-WDYTL-SKDLPVIIGKYIDKLLADAMSPIGISD 296 (395)
Q Consensus 239 ~~l--~~~~~~------~~-p~~~-----~~~~~~~~------~~g-~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~ 296 (395)
+.+ ....+. .. +... ....|... .++ ..+.+ ++.+++.+...+++.++++|+++|+++
T Consensus 210 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~ 289 (378)
T PRK06816 210 LRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRNLDP 289 (378)
T ss_pred EEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcCCCh
Confidence 221 111110 00 1000 01122210 011 12223 456777777777999999999999997
Q ss_pred CCce-EEEEcCCChHHHHHHHHHc-----CCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceE
Q 016094 297 WNSL-FYIVHPGGKVILDQVEQNL-----GLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYG 370 (395)
Q Consensus 297 ~~di-~~i~H~~~~~~~~~i~~~l-----gi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~v 370 (395)
+|| +|++||+|.++++.++++| |+|++|++. ++++|||+++||+|++|++++++ |++++| |+|
T Consensus 290 -~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~---~~~~~GNt~sAsipi~L~~a~~~----g~~~~G---d~v 358 (378)
T PRK06816 290 -DDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFT---NLATVGNTGSASIYIMLDELLNS----GRLKPG---QKI 358 (378)
T ss_pred -hhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEE---eccccccccchHHHHHHHHHHHc----CCCCCC---CEE
Confidence 999 9999999999999999988 999999986 49999999999999999999998 899999 999
Q ss_pred EEEEEccc-ceeeeeeEEec
Q 016094 371 VLFGFGPG-ITVETVVLRSI 389 (395)
Q Consensus 371 ll~~~G~G-~~~~a~llr~~ 389 (395)
++++.|+| ++++.++|+|.
T Consensus 359 l~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 359 LCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred EEEEecccchhheeEEEEEC
Confidence 99988766 99999999984
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-47 Score=368.58 Aligned_cols=304 Identities=17% Similarity=0.179 Sum_probs=243.0
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
+++|.++|+|+|+++++|+++++.+. .. .+|+.+++||++||++.++++
T Consensus 2 ~v~I~~~g~ylP~~~v~~~el~~~~~---~~---------~~~i~~~~Gi~~R~~~~~~~~------------------- 50 (347)
T PRK04262 2 MVGIVGYGAYIPRYRIKVEEIARVWG---DD---------PEAIKRGLGVEEKSVPGPDED------------------- 50 (347)
T ss_pred ceeEEEEEEeCCCEEecHHHHHHHhC---cC---------HHHHhhccCeeeeecCCCCcC-------------------
Confidence 48899999999999999999998752 11 368999999999999876663
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
..+|+.+|+++||+++|++++|||+||++++++ +..|+.+.+|+++||+++... +++++++|++++.+|+.|
T Consensus 51 ------~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~-~~dv~~~C~~~~~aL~~A 123 (347)
T PRK04262 51 ------TATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLT-AADLEFACKAGTAALQAA 123 (347)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCce-EEEHHHhHHHHHHHHHHH
Confidence 899999999999999999999999999999888 778999999999999976433 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCc
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENN 255 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 255 (395)
.++|++|+.++||||++|.... +|.+ . ...++||||+|+||++++.. +.+.+.... .++..+.
T Consensus 124 ~~~i~sg~~~~aLVv~~e~~~~---~~~~-----~-~~~~~GDGA~A~ll~~~~~~-------~~i~~~~~~-~~d~~d~ 186 (347)
T PRK04262 124 MGLVKSGMIKYALAIGADTAQG---APGD-----A-LEYTAAAGGAAFIIGKEEVI-------AEIEATYSY-TTDTPDF 186 (347)
T ss_pred HHHHHcCCCCEEEEEEEeeecc---CCCC-----C-CCCcCCCCcEEEEEecCccc-------ceeeccccc-cccchhh
Confidence 9999999999999999998432 3332 1 12568999999999975431 233322111 1111111
Q ss_pred ee---eeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHH
Q 016094 256 VV---GHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRY 331 (395)
Q Consensus 256 ~~---~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~ 331 (395)
+. +.....+..+. .+ ....+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|++.++
T Consensus 187 ~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~- 260 (347)
T PRK04262 187 WRREGEPYPRHGGRFT--GE--PAYFKHIISAAKGLMEKLGLKP-SDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGL- 260 (347)
T ss_pred cCCCCCcCCCcCceec--ch--HHHHHHHHHHHHHHHHHhCcCH-HHhceeecCCCchHHHHHHHHHcCCCHHHhhccc-
Confidence 10 00011111111 11 1233578889999999999997 999 999999999999999999999999998652
Q ss_pred HHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 332 ALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 332 ~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
++++||||++||+|++|++++++ +++| |+|++++||+|++|.++++||++
T Consensus 261 ~~~~~GNt~sAsi~~~L~~~~~~------~~~G---d~vll~~~G~G~~~~~~~~~~~~ 310 (347)
T PRK04262 261 LTPYIGNTYSGSALLGLAAVLDV------AKPG---DRILVVSFGSGAGSDAFSITVTD 310 (347)
T ss_pred hhhhhCChHHHHHHHHHHHHHHh------CCCC---CEEEEEecCCCcceeeEEEEech
Confidence 47999999999999999999864 6789 99999999999999999999964
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-46 Score=368.05 Aligned_cols=342 Identities=19% Similarity=0.272 Sum_probs=255.0
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhc---CCcchHHHH---------HHHHHHHHhcCcceeeeeechhhhhcCCCCc
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVT---NSEHKIELK---------EKFRRICERSSIRKRYFYLTEEILKENPNMS 85 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~---~~~~~~~~~---------~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~ 85 (395)
++|.++|+|+|+++++|+|+++.+.... +.++.++++ ...+||++++||++||++.+.+.+. +
T Consensus 3 ~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~--~--- 77 (372)
T PRK07515 3 VVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILD--P--- 77 (372)
T ss_pred cEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCc--c---
Confidence 7899999999999999999998752111 000001110 1256899999999999986422110 0
Q ss_pred CCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccc
Q 016094 86 CYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQG 164 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~ 164 (395)
....+.+++|...+.....+|+.+|+++||+++|+++++||.||++++++ +..|+.+..|++.||++. + +++++.+
T Consensus 78 ~~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~~-~--~~~v~~a 154 (372)
T PRK07515 78 DRMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEG-F--AFDMNVA 154 (372)
T ss_pred cccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCCC-c--EEEecch
Confidence 11234455555445456789999999999999999999999999998887 778999999999999973 3 7899999
Q ss_pred cchHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEee
Q 016094 165 CYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSC 244 (395)
Q Consensus 165 C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~ 244 (395)
|+|++.||.+|.++|++|.+++|||+++|.++. +.++.+ +...++|||||+|+||++.+.... +..+++.+.
T Consensus 155 Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~d-----~~~~~lfGDgAaA~vL~~~~~~~~--~~~~~il~~ 226 (372)
T PRK07515 155 CSSATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFRD-----RDSHFIFGDVATAVIVERADTATS--AGGFEILGT 226 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCCEEEEEeeecccc-cccccC-----CCCCEEecCccEEEEEeecccccc--CCCceEEEE
Confidence 999999999999999999999999999999886 334432 235689999999999998654210 012233221
Q ss_pred cc-----eecCCCCCce-e---eeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHH
Q 016094 245 SQ-----MTVPNTENNV-V---GHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILD 313 (395)
Q Consensus 245 ~~-----~~~p~~~~~~-~---~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~ 313 (395)
.. ..++...+.. . .........+.+ +..+++.+.+.++++|+++|+++|+++ +|| +|++||+|.++++
T Consensus 227 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~-~dId~~~~Hq~~~~~~d 305 (372)
T PRK07515 227 RLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTP-ADVKRFWLHQANINMNQ 305 (372)
T ss_pred EeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHH
Confidence 10 0000000000 0 000011123444 677888889999999999999999997 999 9999999999999
Q ss_pred HHHHH-cCC--CcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 314 QVEQN-LGL--GKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 314 ~i~~~-lgi--~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.+.+. ||+ ++++.+. ++++|||++||++|++|+++. +++++| |+|++++||+|++|++++||.
T Consensus 306 ~~~~~llg~~~~~~~~~~---~~~~~GNt~sasi~~~L~~~~------~~~~~G---d~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 306 LIGKKVLGRDATPEEAPV---ILDEYANTSSAGSIIAFHKHS------DDLAAG---DLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred HHHHHhccCCCChhhceE---eHHhcCCchhhHHHHHHHHHh------ccCCCC---CEEEEEEecccHHHHHHHhcc
Confidence 99988 564 5566555 599999999999999999974 347899 999999999999999999985
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-46 Score=363.35 Aligned_cols=305 Identities=16% Similarity=0.146 Sum_probs=238.8
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+. .+ .+|+.+++||++|+++.++++
T Consensus 2 ~~I~g~g~~lP~~~v~n~~l~~~~~---~~---------~~~i~~~~Gi~~r~v~~~~~~-------------------- 49 (345)
T TIGR00748 2 AGIVGYGAYIPMYRIKVEEIARVWG---KD---------PESISNGLPVEEKAVPGLDED-------------------- 49 (345)
T ss_pred ccEEEEEEeCCCeeecHHHHHHHhC---CC---------HhHeeeccceeeeecCCCCCC--------------------
Confidence 6899999999999999999987641 11 367888999999999876663
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+++|+++||+++|+++++||+||++++++ +..|..+..+++.||+++... .++++++|+|++.||++|.
T Consensus 50 -----~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~-~~dv~~aC~g~~~al~~A~ 123 (345)
T TIGR00748 50 -----TATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLT-AADLEFACKAGTAGIQACM 123 (345)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCce-EEEHHHhHHHHHHHHHHHH
Confidence 899999999999999999999999999999888 777889999999999974433 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeccee--cCCCCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMT--VPNTEN 254 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~--~p~~~~ 254 (395)
++|++|..++||||++|.++. +|.+ . ..++|||||+|+||++.+.. ..+....... .++...
T Consensus 124 ~~i~sg~~~~vLVv~~d~~~~---~~~~-----~-~~~~~GDGAaA~vl~~~~~~-------~~~~~~~~~~~d~~~~~~ 187 (345)
T TIGR00748 124 GLVASGMIKYGLAIGADTAQG---APGD-----A-LEYTAGAGGAAYIIGEKNTV-------AYFEGTYSYTTDTPDFWR 187 (345)
T ss_pred HHHHcCCCCEEEEEEEeeccc---CCCc-----c-CcccCCCceEEEEEccCCcc-------eEeecccceecccccccc
Confidence 999999999999999999863 2322 1 23678999999999976532 1221111000 000000
Q ss_pred ceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHH
Q 016094 255 NVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYAL 333 (395)
Q Consensus 255 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~ 333 (395)
.........+..+.....+++ .+.++++++|+++|+++ +|| +|++||+|.++++.+.+.||+|++|++.+. ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~~~gl~~-~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~-~~ 261 (345)
T TIGR00748 188 REGEPYPRHGGRFTGEPAYFH----HVVTAAKGLMEKLGLTP-EDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGL-LT 261 (345)
T ss_pred cCCCcCCCcCCeecChHHHHH----HHHHHHHHHHHHcCCCH-HHcCEEEeCCCChHHHHHHHHHcCCCHHHeeccc-cc
Confidence 000000000101111122333 34478899999999997 999 999999999999999999999999998741 13
Q ss_pred HhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 334 SEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 334 ~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
++|||+++||+|++|+++++. +++| |+|++++||+|++|+++++||++.
T Consensus 262 ~~~GNt~sAsipl~L~~~~~~------~~~G---d~vll~~~G~G~s~~~~~~~~~~~ 310 (345)
T TIGR00748 262 PRIGNTYSGATPVGLSAVLDI------AEPG---DRILAVSYGSGAGSDAFSIVVQDA 310 (345)
T ss_pred cccCchhhhHHHHHHHHHHHh------cCCC---CEEEEEEecCCcceeEEEEEEchh
Confidence 899999999999999999864 7899 999999999999999999999743
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=359.24 Aligned_cols=350 Identities=18% Similarity=0.223 Sum_probs=261.0
Q ss_pred CCCceEEEeeeecCCCC--cccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCC
Q 016094 14 RGPSAKILAIGTATPPN--CFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPS 91 (395)
Q Consensus 14 ~~~~v~I~~ig~~lP~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
++| |+++..++|.|+. +++.+.+.+.......-+ ++-.+++.++.+++||.+ +...|..... .+
T Consensus 95 ~~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~ri~~~sgig~-~t~~p~~~~~----------~~ 160 (502)
T PLN02377 95 PRP-VYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFD--DSSLEFQRKILERSGLGE-DTYVPEAMHY----------IP 160 (502)
T ss_pred CCC-EEEEeeeeecCCccccccHHHHHHHHHHhCCCC--HHHHHHHHHHHHhcCCCC-ccccCchhcc----------CC
Confidence 667 9999999999985 899999998875433221 233456789999999987 4555533211 23
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeec-cccchHH
Q 016094 92 LDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYS-QGCYMGG 169 (395)
Q Consensus 92 ~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~-~~C~s~~ 169 (395)
.+.++..+++...+++..|+++||+++|++|+|||+||+ ++++ +..|+++.+|+++||+++... .++++ +||++++
T Consensus 161 ~~~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~-afdL~gmGCsggl 238 (502)
T PLN02377 161 PRPSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIR-SFNLGGMGCSAGV 238 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCe-EEecccchhhHHH
Confidence 445789999999999999999999999999999999987 7888 689999999999999986554 78998 7999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCce---EEEeecc
Q 016094 170 AVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLF---QVLSCSQ 246 (395)
Q Consensus 170 ~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~---~l~~~~~ 246 (395)
.+|++|.+++++++.++||||++|.+|..+ ++.++ ......+.+|||||+|+||++.+... .+..+ .++....
T Consensus 239 ~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d~-~s~lv~n~LFgDGAaAvlLs~~~~~~--~~a~~~l~~iv~t~~ 314 (502)
T PLN02377 239 IAVDLAKDMLQVHRNTYAVVVSTENITQNW-YFGNK-KSMLIPNCLFRVGGSAVLLSNKSRDK--RRSKYKLVHVVRTHR 314 (502)
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEecccccc-CCCCC-ccccccceeeccccEEEEEecccccc--cccccccceEEEEEE
Confidence 999999999999999999999999998744 34432 22233469999999999999854221 01112 2333222
Q ss_pred eecCCCCCceeeeEecCc-eeEEe-------------------CCcc-------hHHHHHhHHHHHHHhhcccC-CCCCC
Q 016094 247 MTVPNTENNVVGHLKEMG-WDYTL-------------------SKDL-------PVIIGKYIDKLLADAMSPIG-ISDWN 298 (395)
Q Consensus 247 ~~~p~~~~~~~~~~~~~g-~~~~~-------------------~~~v-------~~~~~~~~~~~i~~~L~~~g-~~~~~ 298 (395)
...+...+.+.+...+.| ..+.+ ++.+ +.++...+++.+++.++..+ ... +
T Consensus 315 ~~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~-~ 393 (502)
T PLN02377 315 GADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFK-L 393 (502)
T ss_pred EEcCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcH-h
Confidence 111211111111111111 11111 2222 22344555666676776554 334 7
Q ss_pred ce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcc
Q 016094 299 SL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGP 377 (395)
Q Consensus 299 di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~ 377 (395)
++ +|++||+|+++++.+++.||+++++...++.++++||||+|+|+|+.|+++.++ |++++| |+|++++||+
T Consensus 394 didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~----grik~G---d~VlliaFGs 466 (502)
T PLN02377 394 AFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAK----GRMRKG---NRVWQIAFGS 466 (502)
T ss_pred hcCEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHc----CCCCCC---CeEEEEEEcc
Confidence 78 999999999999999999999975555556679999999999999999999988 999999 9999999999
Q ss_pred cceeeeeeEEeccC
Q 016094 378 GITVETVVLRSIPI 391 (395)
Q Consensus 378 G~~~~a~llr~~~~ 391 (395)
|++|+++++||...
T Consensus 467 Gf~~~s~v~~~~~~ 480 (502)
T PLN02377 467 GFKCNSAVWEALRH 480 (502)
T ss_pred ccEeeeEEEEEecC
Confidence 99999999999754
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-44 Score=355.03 Aligned_cols=351 Identities=19% Similarity=0.251 Sum_probs=259.5
Q ss_pred CCCceEEEeeeecCCCC--cccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCC
Q 016094 14 RGPSAKILAIGTATPPN--CFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPS 91 (395)
Q Consensus 14 ~~~~v~I~~ig~~lP~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
+++ |+++..++|.|+. +++.+.+.+.......-+ ++-.+.+.++.+++|+.+..+..+.- +. . .
T Consensus 111 ~~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~sg~g~~ty~P~~~-~~---------~-~ 176 (521)
T PLN02854 111 SKP-VYLVDFACYKPEDERKISVDSFLTMTEENGSFE--DETVQFQRRISTRSGLGDETYLPRGI-TS---------R-P 176 (521)
T ss_pred CCc-EEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHhcCCCCccccCccc-cC---------C-C
Confidence 567 9999999999985 899999998875433221 33345678999999999876654332 11 1 1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeec-cccchHH
Q 016094 92 LDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYS-QGCYMGG 169 (395)
Q Consensus 92 ~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~-~~C~s~~ 169 (395)
....+...++........|++++|+++|++|+|||.||++ +++ +..|+++.+|+++||+++... +++++ +||++++
T Consensus 177 ~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~-afdLsgmGCSggl 254 (521)
T PLN02854 177 PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIK-SYNLGGMGCSAGL 254 (521)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCce-EEecccchhhhHH
Confidence 2235677788889999999999999999999999999985 667 689999999999999985554 78888 8999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceec
Q 016094 170 AVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTV 249 (395)
Q Consensus 170 ~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~ 249 (395)
.+|++|.+++++++.++||||++|.++.++...+| +.....+.+|||||+|+||++.+... .++.+++.+....+.
T Consensus 255 ~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~D--rs~lv~~~LFgDGAAAvlLs~~~~~~--~~~k~~L~~~v~t~~ 330 (521)
T PLN02854 255 ISIDLANDLLKANPNSYAVVVSTENITLNWYFGND--RSMLLCNCIFRMGGAAVLLSNKARDR--KRSKYQLVHTVRTHK 330 (521)
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCc--hhhhcceeeeccceeEEEEecccccc--cccchheeeEEEEEE
Confidence 99999999999999999999999999854421122 23333478999999999999854221 112344432211111
Q ss_pred ---CCCCCceeeeEecCce-------------------eEE-eCCcchHHHHHh--HHHHHHHhhcccCCCCC-----Cc
Q 016094 250 ---PNTENNVVGHLKEMGW-------------------DYT-LSKDLPVIIGKY--IDKLLADAMSPIGISDW-----NS 299 (395)
Q Consensus 250 ---p~~~~~~~~~~~~~g~-------------------~~~-~~~~v~~~~~~~--~~~~i~~~L~~~g~~~~-----~d 299 (395)
+...+.+.+.....|. .++ .++.++....+. +...+++.|.++|+++. ++
T Consensus 331 ~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~d 410 (521)
T PLN02854 331 GADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLA 410 (521)
T ss_pred eeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCccccc
Confidence 1111111111001110 111 144444333222 45678899999998841 47
Q ss_pred e-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEccc
Q 016094 300 L-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPG 378 (395)
Q Consensus 300 i-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G 378 (395)
+ +|++||+|+++++.+++.||+++++...++.++++||||+|+|+|+.|+++.++ |++++| |+|++++||+|
T Consensus 411 idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~k----Grik~G---D~Vl~iaFGsG 483 (521)
T PLN02854 411 FEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAK----GRVSAG---DRVWQIAFGSG 483 (521)
T ss_pred CcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchh
Confidence 8 999999999999999999999944433344469999999999999999999988 999999 99999999999
Q ss_pred ceeeeeeEEeccC
Q 016094 379 ITVETVVLRSIPI 391 (395)
Q Consensus 379 ~~~~a~llr~~~~ 391 (395)
++|+++++||...
T Consensus 484 ft~~sav~~~~~~ 496 (521)
T PLN02854 484 FKCNSAVWKALRE 496 (521)
T ss_pred hhhhheeeEEecc
Confidence 9999999999754
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=351.40 Aligned_cols=352 Identities=20% Similarity=0.255 Sum_probs=261.6
Q ss_pred CCCceEEEeeeecCCCC--cccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCC
Q 016094 14 RGPSAKILAIGTATPPN--CFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPS 91 (395)
Q Consensus 14 ~~~~v~I~~ig~~lP~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
+++ |+++..++|.|+. +++.+.+.+.......-+ ++-.+++.++.+++|+.+..+..+.- +..-| .+
T Consensus 99 ~~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~sglg~~t~~p~~~-~~~~~------~~- 167 (511)
T PLN02192 99 PRP-VYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFT--EENLEFQRKILERSGLGESTYLPEAV-LNVPP------NP- 167 (511)
T ss_pred CCc-EEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHhcCCCCcccCChhh-ccCCC------Cc-
Confidence 567 9999999999985 899999998875433221 33346678999999999877764432 11111 11
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccchHHH
Q 016094 92 LDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYS-QGCYMGGA 170 (395)
Q Consensus 92 ~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~-~~C~s~~~ 170 (395)
-+...++....+...|+++||+++|++|+|||.||++++..+..|+++..|+++||++.... .++++ +||++++.
T Consensus 168 ---~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~-afdLsgmGCSggl~ 243 (511)
T PLN02192 168 ---CMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIL-SYNLGGMGCSAGLI 243 (511)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCce-EEEcccchhhhHHH
Confidence 35556777999999999999999999999999999885533789999999999999985443 88998 79999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecC
Q 016094 171 VIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250 (395)
Q Consensus 171 al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p 250 (395)
||++|.+++++++.++||||++|.+|..+...+| +.....+.+|||||+|+||++.+... ..+.+++.+....+.+
T Consensus 244 aLdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~d--rs~lv~n~LFgDGAaAvLLs~~~~~~--~~~k~~L~~~vrt~~~ 319 (511)
T PLN02192 244 SIDLAKHLLQVHPNSYALVISMENITLNWYFGND--RSMLVSNCLFRMGGAAILLSNKRSDR--RRSKYQLVHTVRTHKG 319 (511)
T ss_pred HHHHHHHHHHcCCCCeEEEEEEEeccccCCCCCC--HHHHhccccccccceEEEEecccccc--ccccceeeeeEEEEec
Confidence 9999999999999999999999999854421122 23333458999999999999854321 1134566654444445
Q ss_pred CCCCceeeeE----ecCceeEEeCCcchHHHHHhHHHHHHHh--------------hcccC-------CC--CC---Cce
Q 016094 251 NTENNVVGHL----KEMGWDYTLSKDLPVIIGKYIDKLLADA--------------MSPIG-------IS--DW---NSL 300 (395)
Q Consensus 251 ~~~~~~~~~~----~~~g~~~~~~~~v~~~~~~~~~~~i~~~--------------L~~~g-------~~--~~---~di 300 (395)
..+..+.+.. .+.+..+.++++++..+...++..++.+ +.-.| +. .+ .+|
T Consensus 320 ~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~I 399 (511)
T PLN02192 320 ADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAF 399 (511)
T ss_pred CChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhh
Confidence 4444333221 1233566677777766655444333221 00001 11 00 357
Q ss_pred -EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccc
Q 016094 301 -FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGI 379 (395)
Q Consensus 301 -~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~ 379 (395)
+|++||+|+++++.+++.||+++++...++.++++||||+|+|+|+.|+++.++ |++++| |+|++++||+|+
T Consensus 400 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eak----grik~G---DrVl~iaFGsGf 472 (511)
T PLN02192 400 EHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKKG---DRTWQIAFGSGF 472 (511)
T ss_pred ceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEcchH
Confidence 999999999999999999999985444445579999999999999999999988 899999 999999999999
Q ss_pred eeeeeeEEeccC
Q 016094 380 TVETVVLRSIPI 391 (395)
Q Consensus 380 ~~~a~llr~~~~ 391 (395)
+|+++++||...
T Consensus 473 ~~~sav~~~~~~ 484 (511)
T PLN02192 473 KCNSAVWKALRT 484 (511)
T ss_pred hhhhhheeeecc
Confidence 999999999754
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=344.70 Aligned_cols=349 Identities=21% Similarity=0.313 Sum_probs=270.7
Q ss_pred CCCceEEEeeeecCCCC--cccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCC
Q 016094 14 RGPSAKILAIGTATPPN--CFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPS 91 (395)
Q Consensus 14 ~~~~v~I~~ig~~lP~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
+++ ||++..++|.|+. +++.+.+.+.......-+ ++-.+.+.+|.+++||.+-.+. |...+... ..++
T Consensus 57 ~~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~s~~F~~~i~~rSGlg~et~~-p~~~~~~~------~~~~ 126 (466)
T PLN00415 57 SKP-VYLVDFSCHQPTDSCKISSETFFNMAKGAQLYT--EETIQFMTRILNRSGLGDDTYS-PRCMLTSP------PTPS 126 (466)
T ss_pred CCc-EEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHHcCCCCCeee-CCccccCC------CCCC
Confidence 667 9999999999884 899999998875433221 2334567889999999886554 33221111 1223
Q ss_pred HHHHHHHHHHhHHHHHHH-HHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeecc-ccchH
Q 016094 92 LDARHAMLIEEVPKLGKE-AALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQ-GCYMG 168 (395)
Q Consensus 92 ~~~~~~~~~~~~~~la~~-Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~-~C~s~ 168 (395)
+++ .+...+|+.. |+++||+++|++|+|||+||+ ++++ +..|+.+.+++++||+++... .++++. ||+++
T Consensus 127 ~~~-----~~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr~~v~-~~dL~gmGCsgg 199 (466)
T PLN00415 127 MYE-----ARHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLKTDVK-TYNLSGMGCSAG 199 (466)
T ss_pred hhh-----hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCCCCce-EEEeccccchHH
Confidence 221 1245666665 778899999999999999985 5677 589999999999999985554 788886 99999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeccee
Q 016094 169 GAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMT 248 (395)
Q Consensus 169 ~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~ 248 (395)
+.+|++|.+++++++.++||||++|.++.++.++.+ +.....+.+|||||+|+||++++... ..+.|++.....++
T Consensus 200 v~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~d--r~~lv~n~LFgDGAAAvlLs~~~~~~--~~~~~~L~~~vrt~ 275 (466)
T PLN00415 200 AISVDLATNLLKANPNTYAVIVSTENMTLSMYRGND--RSMLVPNCLFRVGGAAVMLSNRSQDR--VRSKYELTHIVRTH 275 (466)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCc--HhHhccceeecccceEEEEecCcccc--cCccceeeeEEEec
Confidence 999999999999999999999999999975534433 33444568999999999999865421 12457665444444
Q ss_pred cCCCCCcee---eeEecCce-eEEeCCcchHHHHHhHHHHHHHhhcccC----------------------CCC--CC-c
Q 016094 249 VPNTENNVV---GHLKEMGW-DYTLSKDLPVIIGKYIDKLLADAMSPIG----------------------ISD--WN-S 299 (395)
Q Consensus 249 ~p~~~~~~~---~~~~~~g~-~~~~~~~v~~~~~~~~~~~i~~~L~~~g----------------------~~~--~~-d 299 (395)
.|++++.+. |...++|+ .+.++++++..+.+.++..++.+ .... ++. ++ +
T Consensus 276 ~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l-~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~ 354 (466)
T PLN00415 276 KGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTAL-GPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFK 354 (466)
T ss_pred CCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHh-hhhccchHHHHHHHHHHHhhhhhhccCCCCCCCcc
Confidence 577776666 66777787 78889999998888877666553 2221 221 01 2
Q ss_pred --e-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEc
Q 016094 300 --L-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFG 376 (395)
Q Consensus 300 --i-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G 376 (395)
+ +|++|++++++++.+++.||++++++..+|+++++||||+|+++++.|+++.++ ++.++| |++++++||
T Consensus 355 ~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~----~~~~~G---drvl~iaFG 427 (466)
T PLN00415 355 LCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAK----CRVKRG---DRVWQLAFG 427 (466)
T ss_pred ccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhh----ccCCCC---CEEEEEEEc
Confidence 6 899999999999999999999999999999999999999999999999999887 778899 999999999
Q ss_pred ccceeeeeeEEeccC
Q 016094 377 PGITVETVVLRSIPI 391 (395)
Q Consensus 377 ~G~~~~a~llr~~~~ 391 (395)
+|+++.++++|+...
T Consensus 428 pGf~~es~v~~~~~~ 442 (466)
T PLN00415 428 SGFKCNSIVWRALRT 442 (466)
T ss_pred CcchhhHhHHHHhcc
Confidence 999999999999754
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-43 Score=338.45 Aligned_cols=307 Identities=26% Similarity=0.338 Sum_probs=247.8
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++++.+. . .++.+.+||++|++..+++.
T Consensus 2 v~I~~i~~~lP~~~v~~~~~~~~~~----~----------~~~~~~~gi~~r~~~~~~~~-------------------- 47 (324)
T cd00827 2 VGIEAIGAYLPRYRVDNEELAEGLG----V----------DPGKYTTGIGQRHMAGDDED-------------------- 47 (324)
T ss_pred ccEEEEEecCCceeecHHHHHHHhC----C----------CcceeeeecceeEecCCCCC--------------------
Confidence 7899999999999999999988741 1 25777899999999876442
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|++++|+++|+++++||.||++++++ ...|+.+.++++.||++..+ +++++++|+|++.||.+|.
T Consensus 48 -----~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~~~~--~~~v~~~C~s~~~al~~A~ 120 (324)
T cd00827 48 -----VPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAE--AFDLKQACYGGTAALQLAA 120 (324)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCCCCc--eeehhhhhHHHHHHHHHHH
Confidence 889999999999999999999999999999887 56888999999999998554 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCC---
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTE--- 253 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~--- 253 (395)
++|++|..++|||+++|.++.... . .....++|||||+|+||++++... .+.+........+...
T Consensus 121 ~~i~~g~~~~vlvv~~e~~~~~~~-~------~~~~~~~~gdgaaA~ll~~~~~~~-----~~~i~~~~~~~~~~~~~~~ 188 (324)
T cd00827 121 NLVESGPWRYALVVASDIASYLLD-E------GSALEPTLGDGAAAMLVSRNPGIL-----AAGIVSTHSTSDPGYDFSP 188 (324)
T ss_pred HHHHcCCCCEEEEEEEHHhhhccc-C------CCCccccccCceEEEEEecCcccc-----cCCceeeeeecccccccCc
Confidence 999999999999999999986331 1 112568999999999999877520 0112211111111110
Q ss_pred -CceeeeEe-----cCceeEEeC---CcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCCh-HHHHHHHHHcCCC
Q 016094 254 -NNVVGHLK-----EMGWDYTLS---KDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGK-VILDQVEQNLGLG 322 (395)
Q Consensus 254 -~~~~~~~~-----~~g~~~~~~---~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~-~~~~~i~~~lgi~ 322 (395)
..+..... .....|.+. .++++...+.++.+++++|++.+++ +|| +|++||+|. .+++.+++.|+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~~~h~~~~~~~~~~~~~~l~~~ 266 (324)
T cd00827 189 YPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS--EDIDYFVPHQPNGKKILEAVAKKLGGP 266 (324)
T ss_pred cceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc--cccceeeccCchHHHHHHHHHHHccch
Confidence 01111000 012234453 4788888899999999999999988 678 999999999 9999999999999
Q ss_pred cccchHHHH-HHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeE
Q 016094 323 KEKLGASRY-ALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVL 386 (395)
Q Consensus 323 ~ek~~~~~~-~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~ll 386 (395)
++++..++. ++++|||+++|++|++|++++++ +++++| |+|+++++|+|++|+++++
T Consensus 267 ~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~----~~~~~G---d~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 267 PEKASQTRWILLRRVGNMYAASILLGLASLLES----GKLKAG---DRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred HhhhccchhhHHHHhCchHHHHHHHHHHHHHhc----CCCCCC---CEEEEEEeccchhheeccC
Confidence 888886542 69999999999999999999998 889999 9999999999999998763
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=320.46 Aligned_cols=305 Identities=22% Similarity=0.208 Sum_probs=238.4
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
|+|.++|.|+|+++++++++++.. +. + .+|+.+.+|+++|+++.++|+
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~-g~--~---------~~~~~~g~G~~~~~~~~~~ed-------------------- 48 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEAR-GV--D---------PEKFHIGIGQKKMAVPPIDED-------------------- 48 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHh-CC--C---------HHHHHhhcCceEEeeCCCCCC--------------------
Confidence 579999999999999999999864 11 1 257888999999999877764
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+++|+++||+++ ++++||+||++|+++ +..|+.+.+|++.||+++... ++++.++|+|++.||++|.
T Consensus 49 -----~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~-~~dv~~aC~gg~~aL~~A~ 120 (379)
T TIGR01835 49 -----IVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCR-SFELKQACYGATAALQMAK 120 (379)
T ss_pred -----HHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCce-EEEeccccHHHHHHHHHHH
Confidence 8899999999999998 899999999999999 778999999999999986443 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCce
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNV 256 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 256 (395)
++|++|+.++||||++|.... . +.+ ....+|||||+|+||++++. .+.+... +... +++.+
T Consensus 121 ~~i~s~~~~~aLVv~~D~a~~--~-~~~------~~~~~~GdGA~A~Ll~~~~~-------i~~~~~~-~~~~--t~~~~ 181 (379)
T TIGR01835 121 GHVALSPDRKVLVIASDIAKY--G-LES------PGEPTQGAGAVAMLVSADPK-------LLAINED-SVLY--TDDIM 181 (379)
T ss_pred HHHHcCCCCeEEEEEeehhhc--c-cCC------CCCccccCccEEEEEecCCC-------eeEEecc-ceee--ecCCC
Confidence 999999999999999999653 1 111 12467999999999998643 1222110 0000 11111
Q ss_pred eeeEecCce-eEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHH----HHHHHHHcCCCc-ccch-
Q 016094 257 VGHLKEMGW-DYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVI----LDQVEQNLGLGK-EKLG- 327 (395)
Q Consensus 257 ~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~----~~~i~~~lgi~~-ek~~- 327 (395)
++. ++.+. ...+ ++...+.+.+.+.++++++|+++|+++ +|+ +|++||++.++ ++.+.+.++++. +++.
T Consensus 182 df~-~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~-~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~ 259 (379)
T TIGR01835 182 DFW-RPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSL-ADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQN 259 (379)
T ss_pred Ccc-CCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCH-HHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHH
Confidence 110 12221 1222 556666788889999999999999997 999 99999998777 345666777773 3332
Q ss_pred ---HHHHHHHhcCCCCcchHHHHHHHHHhhhhhhh-cccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 328 ---ASRYALSEYGNLGAPSVLFILDDVRKKSTEER-KATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 328 ---~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g-~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
.++.+.+++||+++||+|++|..++++ + ++++| |+|+|++||+|.......++..+
T Consensus 260 ~~~~s~~~~~~~GN~~sas~~l~L~~~l~~----~~~~~~G---d~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 260 AYLESIIYNREVGNLYTGSLYLGLASLLEN----AFEDTTG---DKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred HhhhhhhhhhhcCchHhHHHHHHHHHHHHh----cccCCCC---CEEEEEEecCCcceeeEEEEEcc
Confidence 233468999999999999999999987 5 68899 99999999999998888887754
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=280.17 Aligned_cols=220 Identities=50% Similarity=0.794 Sum_probs=187.4
Q ss_pred cccCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCC
Q 016094 9 DVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYK 88 (395)
Q Consensus 9 ~~~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 88 (395)
+=++.+++ .+|.+||+.+|+++++|+++.+.+.+....+..++.++++.++++++||++||++.+.+++..+|++....
T Consensus 7 ~~~~~~g~-A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~ 85 (226)
T PF00195_consen 7 RAQRSPGP-AYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFA 85 (226)
T ss_dssp HHHS-SSS-EEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSS
T ss_pred hcccCCCC-eEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhcc
Confidence 34678888 99999999999999999999998765554444456677889999999999999999988888888877788
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 016094 89 APSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMG 168 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~ 168 (395)
.|++++|++.|.+...+|+.+|+++||+++|++++|||+||++|+|++..|++..+|.++|||++.+.|......||+++
T Consensus 86 ~ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg 165 (226)
T PF00195_consen 86 DPSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGG 165 (226)
T ss_dssp SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhH
Confidence 89999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCC
Q 016094 169 GAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 169 ~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~ 229 (395)
+.+|+.|..+.++.+..+||||++|.+|.+|+.+.+.+.++.....+|||||+|+||+.+|
T Consensus 166 ~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 166 AAGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999999888755555567888999999999999998764
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=299.93 Aligned_cols=304 Identities=17% Similarity=0.172 Sum_probs=232.5
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeee--chhhhhcCCCCcCCCCCCHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYL--TEEILKENPNMSCYKAPSLDA 94 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~--~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.++|.++|.|+|+++|+|+++++.+ ..+ .+|+ .+||.+|+++. ++|+
T Consensus 4 ~vgI~gig~Y~P~~~v~n~eLa~~~---g~~---------~~~~--~~GI~~r~~ava~~~Ed----------------- 52 (459)
T PLN02577 4 NVGILAMEVYFPPTCVQQEALEAHD---GVS---------KGKY--TIGLGQDCMAFCTDVED----------------- 52 (459)
T ss_pred ccEEEEEEEeCCCeEEcHHHHHHHh---CCC---------HHHH--hhccceeEeccCCCCCC-----------------
Confidence 3899999999999999999998874 222 2565 68999999753 4553
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHH---HHcCCCCccccceeeccccchHHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLM---NLLGLEPSVNRLMIYSQGCYMGGA 170 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~---~~LGl~~~~~~~~~i~~~C~s~~~ 170 (395)
..+||++|+++||+++|++|++||+||++|.++ +..|+++.+|+ +.||.+... ++++.++|+|++.
T Consensus 53 --------~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~~~~--afDi~~AC~G~~~ 122 (459)
T PLN02577 53 --------VISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNTDIE--GVDSTNACYGGTA 122 (459)
T ss_pred --------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCCCcE--EeehhhhhHHHHH
Confidence 899999999999999999999999999999999 88999998885 678887654 8999999999999
Q ss_pred HHHHHHHHHHcCC--CCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEE--Eeecc
Q 016094 171 VIRHAKDIAENNP--GARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQV--LSCSQ 246 (395)
Q Consensus 171 al~~A~~ll~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l--~~~~~ 246 (395)
||.+|.++|++|. .++||||++|..+... +|. ..++||||+|+||++++.. .++. .+.++
T Consensus 123 AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~-~~~---------e~t~GdGA~A~lv~~~~~~------~l~~~~~g~~~ 186 (459)
T PLN02577 123 ALLNCVNWVESSSWDGRYGLVVAADSAVYAE-GPA---------RPTGGAGAVAMLVGPNAPI------VFESKYRGSHM 186 (459)
T ss_pred HHHHHHHHHHcCCCCCCeEEEEEechhhccC-CCC---------CCCCCcceEEEEEccCCCc------eeecccccccC
Confidence 9999999999986 4999999999977522 232 2456999999999975531 1221 11111
Q ss_pred eecCCCCCceeeeEecCc-e-eEEe-CCcchHHHHHhHHHHHHHhhccc------CCCCCCce-EEEEcCCChHHHHHHH
Q 016094 247 MTVPNTENNVVGHLKEMG-W-DYTL-SKDLPVIIGKYIDKLLADAMSPI------GISDWNSL-FYIVHPGGKVILDQVE 316 (395)
Q Consensus 247 ~~~p~~~~~~~~~~~~~g-~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~------g~~~~~di-~~i~H~~~~~~~~~i~ 316 (395)
. +.+++ .++.+ . ...+ |+.+++++.+.+..++++++++. |++. +|+ +++|||+..+|.....
T Consensus 187 ~------~~~Df-~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~-~d~d~~vfHqP~~km~~ka~ 258 (459)
T PLN02577 187 A------HVYDF-YKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSI-SDADYFVFHAPYNKLVQKSF 258 (459)
T ss_pred c------ccchh-cccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCH-HHcCEEEecCCccchhHHHH
Confidence 1 11110 12221 1 1333 78899999999999999998887 7887 999 9999999888866655
Q ss_pred HHcCCC----------------------------------------------cccchHHHHHHHhcCCCCcchHHHHHHH
Q 016094 317 QNLGLG----------------------------------------------KEKLGASRYALSEYGNLGAPSVLFILDD 350 (395)
Q Consensus 317 ~~lgi~----------------------------------------------~ek~~~~~~~~~~~Gn~~sasi~~~L~~ 350 (395)
+.|.+. .+|+..+...-+++||++++|+++.|..
T Consensus 259 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~S 338 (459)
T PLN02577 259 ARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALAS 338 (459)
T ss_pred HHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHH
Confidence 444311 0222223335689999999999999999
Q ss_pred HHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 351 VRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 351 ~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
+++.. ...-+| ++|+++++|+|.......+++.+.
T Consensus 339 lL~~~---~~~~~G---~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 339 LVHNK---HSELAG---KRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred HHhhc---cccCCC---CEEEEEeecCCccceeEEEEEeCC
Confidence 99751 113378 999999999999999988888754
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=280.00 Aligned_cols=307 Identities=20% Similarity=0.232 Sum_probs=248.1
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
.++|.++|.|+|.++|..+|+++.- +-+ .+++.+.+|+.+|.+..++|+
T Consensus 2 ~iGI~~~g~y~p~~~i~~~ela~~~----g~d--------~~k~~~gl~~~e~sv~~~~ED------------------- 50 (377)
T COG3425 2 MIGIVGIGAYIPRYRIKLEELARAW----GVD--------PEKIKKGLGVEEKSVPPWDED------------------- 50 (377)
T ss_pred ccccceEEEeccceEeeHHHHHhhc----CCC--------hHHhhhccccccccCCCCchh-------------------
Confidence 3789999999999999999998862 111 357888999999999887775
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
...|+++|++++|+++++||++|+.|+++|.++ +...+++.+|++.||+++... ++++..+|.++..||+.|
T Consensus 51 ------~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~-~~d~~~AC~agT~aL~~a 123 (377)
T COG3425 51 ------AVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSAR-AADVEFACYAGTAALQAA 123 (377)
T ss_pred ------HHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCcee-hhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 888899999999999998775 999999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecce--ecCCCC
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM--TVPNTE 253 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~--~~p~~~ 253 (395)
..++.+|+.+++|||++|+.-. . |.+ ......|+||+|+||++.+.. ...+...+++ ..|+..
T Consensus 124 ~~~v~s~~~~~~LvI~sD~a~~--~-~~~------~~E~t~GAGavA~lIg~n~~~------~a~~~~~~syt~d~~DFw 188 (377)
T COG3425 124 IGWVESGMISYGLVIGADTAQY--A-PGD------ALEYTAGAGAVAFLIGKNPPI------VAEFEGTGSYTTDTPDFW 188 (377)
T ss_pred HHHHHcCCccceEEEeehhhcc--C-CCc------ccCccCCCceEEEEEccCCCe------EEEecCceEEecCCCccc
Confidence 9999999999999999999753 1 221 134678999999999997432 2333232222 233322
Q ss_pred CceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHH
Q 016094 254 NNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYA 332 (395)
Q Consensus 254 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~ 332 (395)
....+.....+ ++..-..+.+.+..+.++++++.|+++ +|+ ++++|+++.++-...++.++++.+++..+...
T Consensus 189 Rp~~~~yp~~d-----g~~s~~~Y~~~~~~a~~~~~~k~gls~-~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~ 262 (377)
T COG3425 189 RPDGQPYPYVD-----GRFSEPAYFKHVENAAKGYMEKTGLSP-DDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVY 262 (377)
T ss_pred ccCCCcccccC-----ceecHHHHHHHHHHHHHHHHHHhCCCh-hhhCeEEecCCCCchHHHHHHHhCccHhhcCccchh
Confidence 21111111111 222234567788899999999999997 999 99999999999999999999998888877444
Q ss_pred HHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 333 LSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 333 ~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
.+++||++++|+++.|..+++. .. .+| |+|++++||+|....+..++..+
T Consensus 263 ~~~vGN~YtgS~~L~Las~L~~----a~-~~G---~rIl~~SYGSGa~s~~fs~~v~~ 312 (377)
T COG3425 263 PQRIGNTYTGSLLLGLASLLDN----AK-LPG---DRILLFSYGSGAGSEAFSITVTD 312 (377)
T ss_pred hhhcCcccchhHHHHHHHHHhh----cC-CCC---CEEEEEeeCCCcceeEEEEEecc
Confidence 5689999999999999999997 33 588 99999999999988777766654
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=270.45 Aligned_cols=308 Identities=18% Similarity=0.169 Sum_probs=211.1
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeee--eechhhhhcCCCCcCCCCCCHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYF--YLTEEILKENPNMSCYKAPSLDA 94 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
+|+|.+||.|+|+++++|+++++.. +. + ..|+ .+||.+|++ +.++|+
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~-g~---~--------~~k~--~~GI~~rr~av~~~~Ed----------------- 49 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYD-GV---S--------AGKY--TIGLGQTKMGFCTDRED----------------- 49 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhc-CC---C--------HHHh--eechhheecccCCCCCC-----------------
Confidence 4899999999999999999998763 11 1 2455 699999994 555553
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHc---CCCCccccceeeccccchHHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLL---GLEPSVNRLMIYSQGCYMGGA 170 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~L---Gl~~~~~~~~~i~~~C~s~~~ 170 (395)
..+|+++|++++|++++++|++||+||++|.++ +..|+++.+|++.| |.++.. ++++.++|+|++.
T Consensus 50 --------~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~--~fDi~~AC~G~t~ 119 (454)
T TIGR01833 50 --------INSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVE--GIDTTNACYGGTA 119 (454)
T ss_pred --------HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCce--EEeccccchhHHH
Confidence 999999999999999999999999999999999 88999999999855 555544 8999999999999
Q ss_pred HHHHHHHHHHcCC--CCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeccee
Q 016094 171 VIRHAKDIAENNP--GARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMT 248 (395)
Q Consensus 171 al~~A~~ll~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~ 248 (395)
||.+|..+|+++. .++||||++|... +.+. ....++||||+|+||++++.-.+ + ..+.......
T Consensus 120 AL~~A~~~i~s~~~~~~~aLVV~sDia~--y~~~--------~~~~t~GaGAvAmLv~~~~~~~~-~---~~~~~~~~~~ 185 (454)
T TIGR01833 120 ALFNAINWIESSSWDGRYALVVAGDIAV--YAKG--------NARPTGGAGAVAMLIGPNAPIVF-E---RGLRGSHMQH 185 (454)
T ss_pred HHHHHHHHHHcCCcCCCeEEEEEecccc--ccCC--------CeeeccccceEEEEeccCcccee-c---CccceEEEee
Confidence 9999999999985 5999999999943 2111 12457899999999998765211 0 0001111111
Q ss_pred cCCCCCcee-e-eEecCceeEEeCCcchHHHHHhH-------HHHHHHhhcc----cCCCCCCce-EEEEcCCChHHHHH
Q 016094 249 VPNTENNVV-G-HLKEMGWDYTLSKDLPVIIGKYI-------DKLLADAMSP----IGISDWNSL-FYIVHPGGKVILDQ 314 (395)
Q Consensus 249 ~p~~~~~~~-~-~~~~~g~~~~~~~~v~~~~~~~~-------~~~i~~~L~~----~g~~~~~di-~~i~H~~~~~~~~~ 314 (395)
.++...... . ...-+| +.--..+.+.+ .+.+..++++ .+.++ +|+ +++||++..+|...
T Consensus 186 ~~DF~rP~~~~~~p~vdg------~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~-~dfd~~~fH~P~~km~~k 258 (454)
T TIGR01833 186 AYDFYKPDLASEYPVVDG------KLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL-NDFDYMVFHSPYCKLVQK 258 (454)
T ss_pred cccccCCCCCCcccccCC------ccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH-hHcCEEeccCCcccHHHH
Confidence 111111000 0 000011 11111122222 2223333333 35776 899 99999998777554
Q ss_pred H-HHHc----C-C----------------------------------------CcccchHHHHHHHhcCCCCcchHHHHH
Q 016094 315 V-EQNL----G-L----------------------------------------GKEKLGASRYALSEYGNLGAPSVLFIL 348 (395)
Q Consensus 315 i-~~~l----g-i----------------------------------------~~ek~~~~~~~~~~~Gn~~sasi~~~L 348 (395)
. ++.+ . - ..+|+..+...-+++||++++|+++.|
T Consensus 259 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L 338 (454)
T TIGR01833 259 SLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCL 338 (454)
T ss_pred HHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHH
Confidence 3 2222 1 0 012333332234699999999999999
Q ss_pred HHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 349 DDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 349 ~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
..+++... .....| ++|+|+++|+|.......+++.+.
T Consensus 339 ~Sll~~~~--~~~~~g---~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 339 ASLLSSKS--AQELAG---KRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHhhCC--ccccCC---CEEEEEeccCCcceeeEEEEEeCC
Confidence 99998511 113468 999999999999999999988754
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=238.08 Aligned_cols=236 Identities=27% Similarity=0.336 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|++++|+++|++++|||.||++++++ +..|+.+.+++..+|++..+ .+++..+|++++.||+.|..+|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~--~~~i~~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGP--AYSVNQACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCC--cceeccHhHHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999999998 66899999999999996444 789999999999999999999999
Q ss_pred CCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeE
Q 016094 182 NPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHL 260 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~ 260 (395)
|..++|||+++|. ++|||||+|+||++++... .+..+..++.+......+...
T Consensus 85 g~~~~~lv~~~e~-------------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~------- 138 (254)
T cd00327 85 GKADIVLAGGSEE-------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM------- 138 (254)
T ss_pred CCCCEEEEEecce-------------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCC-------
Confidence 9999999999988 3589999999999865321 111123444443221111100
Q ss_pred ecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccch--HHHHHHHhcC
Q 016094 261 KEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLG--ASRYALSEYG 337 (395)
Q Consensus 261 ~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~--~~~~~~~~~G 337 (395)
.+....+.+.++++++|+++|+++ +|+ ++++|+.+..+++.+.+.+++++++.. .......++|
T Consensus 139 ------------~~~~~~~~~~~~i~~~l~~ag~~~-~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 205 (254)
T cd00327 139 ------------VPAVSGEGLARAARKALEGAGLTP-SDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTG 205 (254)
T ss_pred ------------CCCCChHHHHHHHHHHHHHcCCCH-HHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccc
Confidence 011124456788999999999997 999 999999999999999999999887763 0012588999
Q ss_pred CCCcchHHHHHHHHHhhhhhhhccc-------CCCCCceEEEEEEcccceeeeeeE
Q 016094 338 NLGAPSVLFILDDVRKKSTEERKAT-------TGEGLEYGVLFGFGPGITVETVVL 386 (395)
Q Consensus 338 n~~sasi~~~L~~~~~~~~~~g~l~-------~G~~~d~vll~~~G~G~~~~a~ll 386 (395)
|+++|+.++.|.++++. .+.+ +| ++++++++|.|+++++++|
T Consensus 206 ~~~~as~~~~l~~~~~~----~~~~~~~~~~~~~---~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 206 HPLGAAGLAILDELLLM----LEHEFIPPTPREP---RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred cchHHHHHHHHHHHHHH----HhCCCcCCCCCCc---CEEEEeeEcCCCcceEEEC
Confidence 99999999999999886 3343 66 9999999999999999875
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-28 Score=236.14 Aligned_cols=254 Identities=21% Similarity=0.223 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHcCCC----CCCcCEEEEEecCC-CC---------------------CCCHHHHHHHHcCCCCccc
Q 016094 103 VPKLGKEAALKAIKEWGQP----VSKITHLIFGAVYG-VD---------------------MPGADVRLMNLLGLEPSVN 156 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~----~~~Id~li~~s~~~-~~---------------------~p~~a~~l~~~LGl~~~~~ 156 (395)
..+|+++|+++||+++|++ +++||+||++++++ +. .|+.+.+++..||++. +
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g-~- 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHG-P- 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCC-C-
Confidence 6789999999999999999 99999999988876 33 6778899999999954 3
Q ss_pred cceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccccCC----------CCc--hhhhhhhhhhhhccccEEEE
Q 016094 157 RLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHE----------PTE--ARLDMLVGQAIFGDGAAAAI 224 (395)
Q Consensus 157 ~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~----------~~~--~~~~~~~~~~l~GDGAaA~v 224 (395)
.+++..+|+|++.||+.|.++|++|..+++||+++|..+..+.. |.. ..+.+...+++|||||+|+|
T Consensus 89 -~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 -AYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred -ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 67889999999999999999999999999999999987642211 000 00112335789999999999
Q ss_pred EecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EE
Q 016094 225 IGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FY 302 (395)
Q Consensus 225 L~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~ 302 (395)
|++.+.. ..+......+.+.+....+... ..+....+.+.++++++|+++|+++ +|| ++
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~~~~~~~~~~------------------~~~~~~~~~~~~~i~~al~~agl~~-~did~~ 228 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGTAATIDGAGM------------------GAFAPSAEGLARAAKEALAVAGLTV-WDIDYL 228 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEEEEccCCCCC------------------CCCCcCHHHHHHHHHHHHHHcCCCH-hHCCEE
Confidence 9986542 0111123444443322111110 0011123456688999999999998 999 99
Q ss_pred EEcCCChHHHHHHHHHcCCCcccc---hHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhccc-----------------
Q 016094 303 IVHPGGKVILDQVEQNLGLGKEKL---GASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT----------------- 362 (395)
Q Consensus 303 i~H~~~~~~~~~i~~~lgi~~ek~---~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~----------------- 362 (395)
++|+.+.++.+.+.+.++++.++. .. +.+..++||+++|+.++.|..++.. .+.+
T Consensus 229 ~~h~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~G~~~aas~~~~l~~~~~~----~~~~~~p~~~~~~~~~~~~~~ 303 (332)
T cd00825 229 VAHGTGTPIGDVKELKLLRSEFGDKSPAV-SATKAMTGNLSSAAVVLAVDEAVLM----LEHGFIPPSIHIEELDEAGLN 303 (332)
T ss_pred EccCCCCCCCCHHHHHHHHHHhCCCCcee-ECCCcccccchhHhHHHHHHHHHHH----HhcCccCCCCCCCCCCcccCc
Confidence 999999999999888887765541 11 1258899999999999999999876 3333
Q ss_pred --------CCCCCceEEEEEEcccceeeeeeE
Q 016094 363 --------TGEGLEYGVLFGFGPGITVETVVL 386 (395)
Q Consensus 363 --------~G~~~d~vll~~~G~G~~~~a~ll 386 (395)
+| ++++++++|.|.++++++|
T Consensus 304 ~~~~~~~~~~---~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 304 IVTETTPREL---RTALLNGFGLGGTNATLVL 332 (332)
T ss_pred ccCCCCCCCC---CEEEEeeecCCCeeEEEeC
Confidence 56 9999999999999999875
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-25 Score=202.39 Aligned_cols=259 Identities=20% Similarity=0.264 Sum_probs=199.2
Q ss_pred CCCCCceEEEeeeecCCCC--cccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCC
Q 016094 12 RSRGPSAKILAIGTATPPN--CFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKA 89 (395)
Q Consensus 12 ~~~~~~v~I~~ig~~lP~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~ 89 (395)
+-++| |+++...+|-|+. +++.+.+.+.+.....- .++-.+.+.+|.+++|+.++.+..+ ..+..
T Consensus 4 ~R~r~-VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f--~~~sl~F~~kIlerSGlG~eTy~P~-~~~~~--------- 70 (290)
T PF08392_consen 4 RRPRP-VYLVDFACYKPPDELRVSREEFIEHARRCGRF--DEESLDFQRKILERSGLGDETYLPP-ALHEI--------- 70 (290)
T ss_pred CCCCC-EEEEeeeecCCCcccccCHHHHHHHHHhcccC--ChhHHHHHHHHHHhcCCCccccCCc-ccccC---------
Confidence 34557 9999999999985 89999999987543221 1333456788999999999988743 32111
Q ss_pred CCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHH
Q 016094 90 PSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGG 169 (395)
Q Consensus 90 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~ 169 (395)
..+..+...++.+..++..|++++|+++|++|+|||.||+.+++....|+++.+|.+++|++.........++||++++
T Consensus 71 -p~~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgl 149 (290)
T PF08392_consen 71 -PPDPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGL 149 (290)
T ss_pred -CCcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhH
Confidence 1124566667778889999999999999999999999999998889999999999999999987753555778999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceec
Q 016094 170 AVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTV 249 (395)
Q Consensus 170 ~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~ 249 (395)
.+|++|+++++..+..++|||++|..+..+.. ..+++...++.+|+|||||+||++.+... .+..|++.+...++.
T Consensus 150 iai~lA~~lL~~~p~~~ALVVstE~~s~~~Y~--G~~rsmlv~NcLFr~GgAAvLLSn~~~~~--~~aky~L~~~vRt~~ 225 (290)
T PF08392_consen 150 IAIDLAKDLLQAHPNSYALVVSTENISANWYR--GNDRSMLVSNCLFRMGGAAVLLSNKPSDR--RRAKYELLHTVRTHT 225 (290)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEEeeccccccc--CCcHHHhhccccccCCceeEEeecCcccc--ccchhhhhheeeeec
Confidence 99999999999999999999999999875532 22356667899999999999999988642 235688887766666
Q ss_pred CCCCCceeee--E-ecCc-eeEEeCCcchHHHHHhHHHHHHHh
Q 016094 250 PNTENNVVGH--L-KEMG-WDYTLSKDLPVIIGKYIDKLLADA 288 (395)
Q Consensus 250 p~~~~~~~~~--~-~~~g-~~~~~~~~v~~~~~~~~~~~i~~~ 288 (395)
...++.+..- . .++| .-+.+++++...+.+.+..-|..+
T Consensus 226 g~~d~ay~~v~q~eD~~g~~Gv~lsk~l~~vag~al~~ni~~l 268 (290)
T PF08392_consen 226 GADDDAYRCVFQEEDEEGIVGVSLSKDLMKVAGKALKANITTL 268 (290)
T ss_pred CCCCCceeeEEEeEcCCCceEEEEecchHHHHHHHHHHHHHHh
Confidence 6666655432 2 2344 356778998888877666655544
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-25 Score=188.47 Aligned_cols=150 Identities=43% Similarity=0.801 Sum_probs=127.4
Q ss_pred EEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHH
Q 016094 240 QVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQN 318 (395)
Q Consensus 240 ~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~ 318 (395)
+++...+..+|++++.+.|.+.+.|+++.+++++|..+.+.+..+++++|++.+++. .++ +|++|+++++|++.+++.
T Consensus 1 el~~~~~~~iP~te~~m~~~i~~~Gf~~~Ls~~vP~~i~~~i~~~~~~~L~~~g~~~-~~~~~wavHPGG~~ILd~v~~~ 79 (151)
T PF02797_consen 1 ELVSTSSHLIPDTEDAMGWDIGDTGFHFILSKEVPDLISDNIPPFVEDLLARHGLSD-WDILFWAVHPGGRKILDAVEEA 79 (151)
T ss_dssp EEEEEEEEE-TT-TTSEEEEEETTEEEEEE-TTHHHHHHHHHHHHHHHHHHGGTCCS-GGGSEEEEE-SSHHHHHHHHHH
T ss_pred CceeccceEecCCcCceEEEEeCCeEEEEEhhHhHHHHHHHHHHHHHHHHhhhcccc-cccceeeecCChHHHHHHHHHH
Confidence 456677788999999999999999999999999999999999999999999999996 566 999999999999999999
Q ss_pred cCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 319 LGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 319 lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
|+++++++..+|+++++||||+|++++++|++++++..++|....|.|.+++++++||+|++..+++||.-|
T Consensus 80 L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~~ 151 (151)
T PF02797_consen 80 LGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSVP 151 (151)
T ss_dssp HTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-B
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeCC
Confidence 999999999999999999999999999999999985333354555444589999999999999999999753
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-21 Score=186.57 Aligned_cols=320 Identities=15% Similarity=0.071 Sum_probs=206.9
Q ss_pred eEEEeeeecCCCCcccccchHHHHH-hhcCCcchHHHHH-HHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFF-RVTNSEHKIELKE-KFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDAR 95 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~-~~~~~~~~~~~~~-~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
++|+++|..-|=-. +.++....++ ++.+.+..+.+-. ..+||..++++.+|++.. .+
T Consensus 5 v~I~~~g~vs~lG~-~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~------------------- 63 (348)
T PRK06147 5 LAIVGSGMVTAVGL-DAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPPWRG-PE------------------- 63 (348)
T ss_pred eEEEecceeecCcC-CHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcccCc-hH-------------------
Confidence 88999988887643 2222222221 1111110000000 024677778888887743 22
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHcC-CCCCCcCEEEEEecC-----C-CCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 016094 96 HAMLIEEVPKLGKEAALKAIKEWG-QPVSKITHLIFGAVY-----G-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMG 168 (395)
Q Consensus 96 ~~~~~~~~~~la~~Aa~~aL~~ag-i~~~~Id~li~~s~~-----~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~ 168 (395)
...+|+..|++++|++++ +++++||++|+.+.. + ...+..+..++++||+..... .+++..+|+|+
T Consensus 64 ------r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~-~~~i~~~casg 136 (348)
T PRK06147 64 ------RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPG-SAVIARGRVSG 136 (348)
T ss_pred ------HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCC-cccccccchHH
Confidence 278999999999999999 799999999986541 2 234456788999999954332 68999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEecccccc-----cCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe
Q 016094 169 GAVIRHAKDIAENNPGARVLVVCCDITVLH-----FHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLS 243 (395)
Q Consensus 169 ~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~ 243 (395)
+.||..|.++|++|.++.+||+++|.++.. |.........+...+++|||||+++||++.+.... ....+..
T Consensus 137 ~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~---rga~i~a 213 (348)
T PRK06147 137 AVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEA---PGLPLLG 213 (348)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhc---CCCceEE
Confidence 999999999999999999999999987641 10000000012336899999999999998664310 1122332
Q ss_pred ecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHH-----HHHH
Q 016094 244 CSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILD-----QVEQ 317 (395)
Q Consensus 244 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~ 317 (395)
.+....++ +.+...+. + ...+.+.++++++|+++|+++ +|| ++..|..+....+ .+.+
T Consensus 214 ~g~~~~~~------------~~~~~~~~--p-~~g~gl~~ai~~AL~~agl~~-~dId~v~ah~~gt~~~d~~e~~A~~~ 277 (348)
T PRK06147 214 LGLGREPA------------PVGESEDL--P-LRGDGLTQAIRAALAEAGCGL-EDMDYRIADLNGEQYRFKEAALAEMR 277 (348)
T ss_pred EEEeecCC------------CcccCCCC--C-CChHHHHHHHHHHHHHcCCCH-HHCCEEEcCCCCCccchHHHHHHHHH
Confidence 11111111 00000000 0 023467789999999999997 999 9999998765533 2344
Q ss_pred HcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 318 NLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 318 ~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
.++-..+..+. |.....+||+++|+-++.|...+.. +.+| .-+| +++|+++..-...-++++|+.++
T Consensus 278 ~f~~~~~~~~~-~~~k~~~Gh~~aAaG~~~~~~a~~~-~~~g-~~~g---~~~L~~s~~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 278 LFRVRKEFFDL-WHPAECIGEIGAAIGPALLGVALAA-SRKG-YGPG---PNVLCHLSDDDGARAALVLEYRR 344 (348)
T ss_pred HhhhccCCCce-ecchHhhcchHHHHHHHHHHHHHHH-HHcC-cCCC---CcEEEEecCCCCceEEEEEeccc
Confidence 55532222222 1257889999999999988865543 1114 4467 89999999988888999999764
|
|
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-21 Score=152.50 Aligned_cols=89 Identities=33% Similarity=0.599 Sum_probs=78.2
Q ss_pred hcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCC
Q 016094 289 MSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGL 367 (395)
Q Consensus 289 L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~ 367 (395)
|+++|+++ +|| ++++||.|.++++.+++.+|+++++++.+ +++|||+++||+|++|++++++ |++++|
T Consensus 1 L~~~g~~~-~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~---~~~~Gn~~sa~~~~~L~~~~~~----g~~~~G--- 69 (90)
T PF08541_consen 1 LERAGLSP-DDIDHFIPHQASKKILDSIAKRLGIPPERFPDN---LAEYGNTGSASIPINLADALEE----GRIKPG--- 69 (90)
T ss_dssp HHHTT--G-GGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-T---HHHH-B-GGGHHHHHHHHHHHT----TSSCTT---
T ss_pred CccccCCH-HHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHH---HhccCcchhhhHHHHHHHHHHc----CCCCCC---
Confidence 67899997 999 99999999999999999999999999875 8999999999999999999999 899999
Q ss_pred ceEEEEEEcccceeeeeeEEe
Q 016094 368 EYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 368 d~vll~~~G~G~~~~a~llr~ 388 (395)
|+|+++++|+|++|+++++||
T Consensus 70 d~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 70 DRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEEEEEEETTTEEEEEEEE-
T ss_pred CEEEEEEEEhhheeEEEEEEC
Confidence 999999999999999999998
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=162.79 Aligned_cols=244 Identities=14% Similarity=0.113 Sum_probs=160.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
...+|+.+|+++||+++|++++|||.+|+++. +. .+..+..+++.||+ + .++++.+|+++..||.+|..+|++
T Consensus 49 Ae~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~-Q~~~As~vA~~LGI---P--~fdV~~ACSTf~~AL~lAa~lI~S 121 (327)
T TIGR02845 49 AERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN-QIITANFVARDLGI---P--FLGLYGACSTSMETLALGAMLVDG 121 (327)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC-cccHHHHHHHHhCC---C--EEEEeccCHHHHHHHHHHHHHHhC
Confidence 37789999999999999999999999999874 31 34568899999997 2 589999999999999999999999
Q ss_pred CCCCeEEEEEeccccc---ccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCceee
Q 016094 182 NPGARVLVVCCDITVL---HFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVG 258 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~---~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 258 (395)
|.+++|||+++++.+. +|+-|.+..-+++.+..+|||||+|+||++.+.. +...-...|.. .++
T Consensus 122 G~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~~~-----~~i~~~t~gkv--------~d~ 188 (327)
T TIGR02845 122 GFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGG-----PRITSATIGKV--------VDY 188 (327)
T ss_pred CCCCEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecCCC-----CceEEEEEEEE--------Eec
Confidence 9999999999999872 2433422111345578999999999999987543 12111111110 111
Q ss_pred eEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcC---CChHHHHHHHHHcCCCcccchHHHH--H
Q 016094 259 HLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHP---GGKVILDQVEQNLGLGKEKLGASRY--A 332 (395)
Q Consensus 259 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~---~~~~~~~~i~~~lgi~~ek~~~~~~--~ 332 (395)
.+.+ -+.||. .+.....+.|.+.|++.|.++ +|. .++.-- .+++++..+.++-|++.++.+.+.- +
T Consensus 189 g~~d---~~nmga----amapaa~dti~~h~~d~~~~~-~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~~dcg~~i 260 (327)
T TIGR02845 189 GITD---PLDMGA----AMAPAAADTIEAHFKDTGRSV-DDYDLIVTGDLARVGSEILRKLLKERGYDVTERYDDCGVMI 260 (327)
T ss_pred CCCC---cccchh----hhhHHHHHHHHHHHHHcCCCh-hhccEEEecchHHHHHHHHHHHHHHcCCChhhccccCCeEE
Confidence 1111 122322 233344567888999999997 887 555533 5678888888877876543222100 0
Q ss_pred H-----HhcCCCCcchHHHHHH-HHHhhhhhhhcccCCCCCceEEEEEEcccce
Q 016094 333 L-----SEYGNLGAPSVLFILD-DVRKKSTEERKATTGEGLEYGVLFGFGPGIT 380 (395)
Q Consensus 333 ~-----~~~Gn~~sasi~~~L~-~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~ 380 (395)
+ -.-|-.|++-.-.++. +++++ ++.| ...+||+++.|+=++
T Consensus 261 y~~~~~~~aggsgc~csa~v~~~~~~~~------~~~g-~~~r~l~v~tgalls 307 (327)
T TIGR02845 261 YRPDQQVFAGGSGCACSAVVTYGHILKE------MLRG-KLKKVLVVATGALLS 307 (327)
T ss_pred EcCCCcccCCCcccchhHHHHHHHHHHH------HhcC-cceEEEEEEchhhcC
Confidence 0 1224444444444444 44443 3334 135899999997443
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-19 Score=153.99 Aligned_cols=166 Identities=23% Similarity=0.290 Sum_probs=127.8
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
+|+|.+|+.|+|...++.+++++.- ++ + ..++....|.+++.++.+.|+
T Consensus 4 ~VGI~~i~~y~p~~~v~~~~La~~~-g~---d--------~~K~~~glgq~~~av~~~~ED------------------- 52 (174)
T PF01154_consen 4 NVGIDAIEFYIPRYYVDQEELAEAR-GV---D--------PGKYTIGLGQEKMAVPPPDED------------------- 52 (174)
T ss_dssp SEEEEEEEEE-ESEEEEHHHHHHHT-TS------------TCHHHTTT--SEEEE--TTS--------------------
T ss_pred cccEeEEEEecCceEecHHHHHHHh-CC---C--------HHHhhhhcCeeEEEeCCCccc-------------------
Confidence 3999999999999999999998762 22 1 135666788888899887775
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCcc-ccceeeccccchHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSV-NRLMIYSQGCYMGGAVIRH 174 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~-~~~~~i~~~C~s~~~al~~ 174 (395)
...||+.|++.+|++.++++++|+.|+++|.+. +...+++.+|++.||+.... .+.+++.++|.|+..||+.
T Consensus 53 ------~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~ 126 (174)
T PF01154_consen 53 ------IVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQN 126 (174)
T ss_dssp ------HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHH
Confidence 999999999999999999999999999999999 78889999999999994322 2378999999999999999
Q ss_pred HHHHHHcCC--CCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCC
Q 016094 175 AKDIAENNP--GARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 175 A~~ll~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~ 229 (395)
|..+++++. .+++|||++|... |- +.. ...+-|-||+|+||+++.
T Consensus 127 a~~~v~s~~~~g~~aLVVasDiA~--y~-~g~-------~e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 127 AVNWVASSPWDGRKALVVASDIAR--YD-LGS-------AEPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp HHHHHCSTTSTTEEEEEEEEEEE----S-TTT-------TGGG-EEEEEEEEEECS-
T ss_pred HHHHHhcCCCCCCeEEEEeccccc--cC-CCC-------ccccccceeEEEEecCCC
Confidence 999999985 5799999999975 31 111 235789999999999864
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=156.55 Aligned_cols=243 Identities=14% Similarity=0.115 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g 182 (395)
..+|+.+|+++||+++|++++|||.+|+++...+ +..+..+++.||+ + ++++..+|+++..+|.+|..+|++|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI---P--a~dV~gACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI---P--FLGLYGACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC---c--EEEEeccCHHHHHHHHHHHHHHhcC
Confidence 7789999999999999999999999999975333 3567899999997 3 7899999999999999999999999
Q ss_pred CCCeEEEEEeccccc---ccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCceeee
Q 016094 183 PGARVLVVCCDITVL---HFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGH 259 (395)
Q Consensus 183 ~~~~vLvv~~e~~s~---~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~ 259 (395)
.+++|||+++++.+. +|+.|.+-.-+...+...++|||+|+||++.... +...-...|.. +++.
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~~~-----~~i~~~t~Gkv--------~D~g 195 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREGSG-----PRITHATIGKV--------VDLG 195 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCCCC-----ceEEEEeEEEE--------EecC
Confidence 999999999999874 4665643222233467889999999999987542 12221111110 1111
Q ss_pred EecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcC---CChHHHHHHHHHcCCCcccchHHH--HHH
Q 016094 260 LKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHP---GGKVILDQVEQNLGLGKEKLGASR--YAL 333 (395)
Q Consensus 260 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~---~~~~~~~~i~~~lgi~~ek~~~~~--~~~ 333 (395)
+.+ -+.||. .+.....+.|.+.|++.|.++ +|. .++.-- .+..++..+.++-|++.++.+.++ .++
T Consensus 196 ~~d---~~nmga----aMapAa~dti~~h~~d~~~~~-~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy 267 (337)
T PRK08304 196 IKD---PNDMGA----AMAPAAADTIQQHFKDTGRSP-EDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMIY 267 (337)
T ss_pred CCC---cccchh----hhhHHHHHHHHHHHHHcCCCh-hhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEEe
Confidence 111 122322 233344567788999999997 888 555533 567888888888788764322210 001
Q ss_pred ---H---hcCCCCcchHHHHHH-HHHhhhhhhhcccCCCCCceEEEEEEcccce
Q 016094 334 ---S---EYGNLGAPSVLFILD-DVRKKSTEERKATTGEGLEYGVLFGFGPGIT 380 (395)
Q Consensus 334 ---~---~~Gn~~sasi~~~L~-~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~ 380 (395)
+ .-|-.|++-.-.++. +++++ ++.| ...+||+++.|+=++
T Consensus 268 ~~~~q~~~aGgSGc~csa~v~~~~~~~~------~~~g-~~~rvl~v~tGaLls 314 (337)
T PRK08304 268 DSEQQDVFAGGSGCACSAVVTYGYLLKE------LQKG-KLKRVLVVATGALLS 314 (337)
T ss_pred ccCCCcccCCCcccchhHHHHHHHHHHH------HhcC-CceEEEEEEchhhcC
Confidence 1 124444444444444 44443 3333 125899999997443
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.2e-17 Score=163.43 Aligned_cols=259 Identities=15% Similarity=0.182 Sum_probs=171.0
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC-C--------------------------CCCCHHHHHHHH
Q 016094 100 IEEVPKLGKEAALKAIKEWGQPVSKITH----LIFGAVYG-V--------------------------DMPGADVRLMNL 148 (395)
Q Consensus 100 ~~~~~~la~~Aa~~aL~~agi~~~~Id~----li~~s~~~-~--------------------------~~p~~a~~l~~~ 148 (395)
......|+.+|+++||+++|++++++|. ++++++.+ . ..+..+.+|+..
T Consensus 68 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 147 (406)
T cd00834 68 MDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIR 147 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHH
Confidence 3457889999999999999999877663 55555432 1 124567899999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccccc---------------------CCCCchhh
Q 016094 149 LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHF---------------------HEPTEARL 207 (395)
Q Consensus 149 LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~---------------------~~~~~~~~ 207 (395)
||++.. .+.+..+|+|++.||..|..+|++|.+++|||+++|..+..+ ..|.+
T Consensus 148 lgl~g~---~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~--- 221 (406)
T cd00834 148 LGLRGP---NYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFD--- 221 (406)
T ss_pred hCCCCc---ccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCC---
Confidence 999753 678999999999999999999999999999999999876110 01111
Q ss_pred hhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHH
Q 016094 208 DMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLA 286 (395)
Q Consensus 208 ~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 286 (395)
....++++||||+|+||++.+... .+......+.+.+... ++..... +. .....+.++++
T Consensus 222 -~~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~--------------d~~~~~~-~~---~~~~~~~~~i~ 282 (406)
T cd00834 222 -KDRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASS--------------DAYHITA-PD---PDGEGAARAMR 282 (406)
T ss_pred -CCCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecc--------------cCCCCCC-CC---CCcHHHHHHHH
Confidence 123578999999999999865321 1111233444432210 0100000 00 01235567899
Q ss_pred HhhcccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhc
Q 016094 287 DAMSPIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360 (395)
Q Consensus 287 ~~L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~ 360 (395)
++|+++|+++ +|| ++.+|..+....+ .+.+.++-..++++.+ ..-..+||+.+|+-++.|..++.. ++++.
T Consensus 283 ~al~~agi~~-~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ 359 (406)
T cd00834 283 AALADAGLSP-EDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVS-STKSMTGHLLGAAGAVEAIATLLA-LRDGV 359 (406)
T ss_pred HHHHHcCCCH-HHCCEEecccccCccccHHHHHHHHHHhcccCCCCcee-CcchhhccchhhhhHHHHHHHHHH-HhcCC
Confidence 9999999997 999 9999988765533 4555565533344432 246788999999988887765432 11133
Q ss_pred ccCC---------C------------CCceEEEEEEcccceeeeeeE
Q 016094 361 ATTG---------E------------GLEYGVLFGFGPGITVETVVL 386 (395)
Q Consensus 361 l~~G---------~------------~~d~vll~~~G~G~~~~a~ll 386 (395)
+.+- . ...+++..+||.|.+-.+++|
T Consensus 360 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 360 LPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred cCCCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 2210 0 014678888998887777664
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.4e-16 Score=155.96 Aligned_cols=253 Identities=15% Similarity=0.108 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.||+++.++ ...+..+..++..+|++...+ +++++.+|+|++.++..|.++|++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p-~~~V~~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVP-AMTLNKVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcc-eEEecccchhHHHHHHHHHHHHHc
Confidence 789999999999999999999999999999876 445677888999999986332 889999999999999999999999
Q ss_pred CCCCeEEEEEecccccc-cC---------------------CC-Cc----h---------------h-------------
Q 016094 182 NPGARVLVVCCDITVLH-FH---------------------EP-TE----A---------------R------------- 206 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~-~~---------------------~~-~~----~---------------~------------- 206 (395)
|..++|||+++|+++.. +. ++ .+ . +
T Consensus 105 G~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Av~sh~ 184 (393)
T PRK05656 105 GDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAASQQ 184 (393)
T ss_pred CCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999977631 10 00 00 0 0
Q ss_pred ----------hhhh---------------------------------------hhhhh-------hccccEEEEEecCCC
Q 016094 207 ----------LDML---------------------------------------VGQAI-------FGDGAAAAIIGADPD 230 (395)
Q Consensus 207 ----------~~~~---------------------------------------~~~~l-------~GDGAaA~vL~~~~~ 230 (395)
+++. ..+.+ ++|||+|+||++++.
T Consensus 185 ~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~ 264 (393)
T PRK05656 185 KAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAK 264 (393)
T ss_pred HHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEEccccCCCCCceEEEEEecHHH
Confidence 0000 00002 455555555554332
Q ss_pred CC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCC
Q 016094 231 VS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGG 308 (395)
Q Consensus 231 ~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~ 308 (395)
.. .+..+..++.+.+.. +. -+.........+++++|+++|+++ +|| ++-+|-..
T Consensus 265 A~~~g~~~~a~i~g~~~~----------------------~~-~~~~~~~~~~~a~~~al~~agl~~-~dId~~e~~d~f 320 (393)
T PRK05656 265 AKALGLPVLAKIAAYANA----------------------GV-DPAIMGIGPVSATRRCLDKAGWSL-AELDLIEANEAF 320 (393)
T ss_pred HHHCCCCeeEEEEEEEEe----------------------cC-CCcccchhHHHHHHHHHHHcCCCH-HHCCEEEecCcc
Confidence 10 001111223322111 00 011111234468899999999997 999 99999876
Q ss_pred hHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 309 KVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 309 ~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
......+.+.||++.+++..+ --...+||...|+-...+.+++.+ -+.+.| .+.|.....+|..-++++|+.
T Consensus 321 ~~~~~~~~e~lg~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~l~~~----l~~~~~---~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 321 AAQSLAVGKELGWDAAKVNVN-GGAIALGHPIGASGCRVLVTLLHE----MIRRDA---KKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred HHHHHHHHHHhCCCCccCCcC-CCHHHhCccHHHHHHHHHHHHHHH----HHHcCC---CEEEEEEcccCcceEEEEEec
Confidence 666667789999987666442 235668999988888878777776 222333 444444444444445666654
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.7e-16 Score=152.35 Aligned_cols=251 Identities=15% Similarity=0.142 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEP-SVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~-~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|++++|||.||+++.++ +..|..+..++..||++. .+ +++++++|+|++.+|..|.++|+
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~--~~~v~~~c~s~~~al~~A~~~I~ 99 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVP--ATTVNRVCGSGLQAVALAAQSIA 99 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc--hhhhccccHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999988776 556777888999999985 44 78999999999999999999999
Q ss_pred cCCCCeEEEEEecccccc-----------cCC--------CC---c---h----------------hhh--------h--
Q 016094 181 NNPGARVLVVCCDITVLH-----------FHE--------PT---E---A----------------RLD--------M-- 209 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~-----------~~~--------~~---~---~----------------~~~--------~-- 209 (395)
+|.+++|||+++|.++.. +.. +. + . +++ +
T Consensus 100 sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~~ 179 (386)
T cd00751 100 AGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQ 179 (386)
T ss_pred CCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999999999999976421 000 00 0 0 000 0
Q ss_pred -----h-----------------------------------------------------hhhhhhccccEEEEEecCCCC
Q 016094 210 -----L-----------------------------------------------------VGQAIFGDGAAAAIIGADPDV 231 (395)
Q Consensus 210 -----~-----------------------------------------------------~~~~l~GDGAaA~vL~~~~~~ 231 (395)
+ .....++|||+|+||++.+..
T Consensus 180 ~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~dGaaavvl~s~~~a 259 (386)
T cd00751 180 RAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEKA 259 (386)
T ss_pred HHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCcceEEEEEecHHHH
Confidence 0 000122577777777665421
Q ss_pred C-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCCh
Q 016094 232 S-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGK 309 (395)
Q Consensus 232 ~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~ 309 (395)
. .+..+...+.+.+... . +... .......+++++|+++|+++ +|| ++-+|-...
T Consensus 260 ~~~~~~~~~~I~g~~~~~----~----------------~~~~---~~~~~~~a~~~a~~~Agi~~-~did~~e~~d~f~ 315 (386)
T cd00751 260 KELGLKPLARIVGYAVAG----V----------------DPAI---MGIGPVPAIPKALKRAGLTL-DDIDLIEINEAFA 315 (386)
T ss_pred HHCCCCeeEEEEEEEEcc----C----------------CCcc---cchhHHHHHHHHHHHcCCCH-HHcCEEEeechhH
Confidence 1 1011112333322110 0 0000 01123478889999999997 999 888997765
Q ss_pred HHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEE
Q 016094 310 VILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 310 ~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr 387 (395)
...-...+.||+.+..+..+ --.-.+||...++-...+.++..+.. |+ .+ .+.|...-|+|..-++++|+
T Consensus 316 ~~~~~~~e~lg~~~~pvn~~-GG~l~~Gh~~gasG~~~~~e~~~qL~--g~--~~---~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 316 AQALACLKELGLDPEKVNVN-GGAIALGHPLGASGARIVVTLLHELK--RR--GG---RYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred HHHHHHHHHhCCChhhcCCC-cchHhhCccHHHHHHHHHHHHHHHHH--hc--CC---CEEEEEEcccccceEEEEEE
Confidence 55555678899876444432 12346899999988888888777622 21 22 56677667777777778876
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-16 Score=156.07 Aligned_cols=265 Identities=16% Similarity=0.164 Sum_probs=172.0
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-CC-------------------CCCHHHHHHHHcCCCCc
Q 016094 99 LIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-VD-------------------MPGADVRLMNLLGLEPS 154 (395)
Q Consensus 99 ~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~~-------------------~p~~a~~l~~~LGl~~~ 154 (395)
.......|+.+|+++||+++|+++++|| .|++++.++ +. .+..+.+++..+|+...
T Consensus 83 ~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g~ 162 (424)
T smart00825 83 AMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRGP 162 (424)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCCC
Confidence 4445678999999999999999999998 788887643 21 33567789999999763
Q ss_pred cccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCCCCch--hhhhhhhhhhhccccEE
Q 016094 155 VNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHEPTEA--RLDMLVGQAIFGDGAAA 222 (395)
Q Consensus 155 ~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~~~~~--~~~~~~~~~l~GDGAaA 222 (395)
.+.+..+|++++.||..|..+|++|.++.|||+++|..... +..+... .+.....++++||||+|
T Consensus 163 ---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaa 239 (424)
T smart00825 163 ---SVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGV 239 (424)
T ss_pred ---ccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEE
Confidence 67899999999999999999999999999999999975321 1111110 01122257899999999
Q ss_pred EEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-
Q 016094 223 AIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL- 300 (395)
Q Consensus 223 ~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di- 300 (395)
+||++.+... .+.....++.+.+.... +.+... ..+ ....+..+++++|+++|+++ +||
T Consensus 240 lVLe~~e~A~~~g~~i~a~I~g~~~~~~--------------~~~~~~--~~~--~~~~~~~a~~~al~~Agl~~-~dId 300 (424)
T smart00825 240 VVLKRLSDALRDGDPILAVIRGSAVNQD--------------GRSNGL--TAP--SGPAQARLIRQALARAGVDP-ADVD 300 (424)
T ss_pred EEEccHHHHHHCCCeEEEEEEEEEEeCC--------------CCCCCC--CCc--CHHHHHHHHHHHHHHhCCCH-HHcc
Confidence 9999864321 11112234444332110 000000 001 12345678899999999997 999
Q ss_pred EEEEcCCChHH-----HHHHHHHcCCCc---ccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC---------
Q 016094 301 FYIVHPGGKVI-----LDQVEQNLGLGK---EKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT--------- 363 (395)
Q Consensus 301 ~~i~H~~~~~~-----~~~i~~~lgi~~---ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~--------- 363 (395)
++.+|-.+... ...+.+.++... .+++.+ .+-..+||+.+|+-.+.|...+... .++.+.+
T Consensus 301 ~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~l-~~~~ip~~~~~~~~~~ 378 (424)
T smart00825 301 YVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLG-SVKSNIGHLEAAAGVAGLIKVVLAL-RHGTIPPTLHFETPNP 378 (424)
T ss_pred EEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEe-ccccccCCcccchhHHHHHHHHHHH-hCCCCCCCCCCCCCCC
Confidence 99999765443 334556665321 223222 1345679999998877776544210 0021110
Q ss_pred --------------------CCCCceEEEEEEcccceeeeeeEE
Q 016094 364 --------------------GEGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 364 --------------------G~~~d~vll~~~G~G~~~~a~llr 387 (395)
+...+.++..+||-|...++++|+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~ 422 (424)
T smart00825 379 HIDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILE 422 (424)
T ss_pred CCCcccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEe
Confidence 001267899999998888888876
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-15 Score=148.97 Aligned_cols=93 Identities=14% Similarity=0.053 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCC-CCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDM-PGADVRLMNLLGLEP-SVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~-p~~a~~l~~~LGl~~-~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++|++++|||.||++++++ ... +..+..++..+|++. .+ +++++.+|+|++.|+..|.++|
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p--~~~V~~aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETP--AFNVNRLCGSGLQAIVSAAQAI 104 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCc--eEEecccchHHHHHHHHHHHHH
Confidence 889999999999999999999999999999887 433 356667777889974 44 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
++|.+++|||+++|++|.
T Consensus 105 ~sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 105 LLGDADVAIGGGAESMSR 122 (394)
T ss_pred HcCCCCEEEEEeehhccc
Confidence 999999999999998874
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.2e-15 Score=149.02 Aligned_cols=251 Identities=17% Similarity=0.176 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEP-SVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~-~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|++++|||.+|+++.++ ...|..+..++..+|++. .+ +++++.+|++++.+|..|.++|+
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~--~~~v~~~Casg~~al~~A~~~I~ 98 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVP--AYTVNRQCASGLQAVILAAQLIR 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCce--eeeecchhhHHHHHHHHHHHHHH
Confidence 889999999999999999999999999988766 445777888999999985 44 78999999999999999999999
Q ss_pred cCCCCeEEEEEeccccccc---CC-------C-----------C---c----h---------------hh----------
Q 016094 181 NNPGARVLVVCCDITVLHF---HE-------P-----------T---E----A---------------RL---------- 207 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~~---~~-------~-----------~---~----~---------------~~---------- 207 (395)
+|.+++|||+++|+++... .. . . + . ++
T Consensus 99 sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~y~~~yG~t~e~la~vav~~ 178 (386)
T TIGR01930 99 AGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAENLAKKYGISREEQDEYALRS 178 (386)
T ss_pred CCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 9999999999989854310 00 0 0 0 0 00
Q ss_pred -----hh-----------h------------------------------------------hhhhhhccccEEEEEecCC
Q 016094 208 -----DM-----------L------------------------------------------VGQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 208 -----~~-----------~------------------------------------------~~~~l~GDGAaA~vL~~~~ 229 (395)
.+ . .....++|||+|+||++.+
T Consensus 179 ~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~~~d~~~~~dGAaa~vl~s~~ 258 (386)
T TIGR01930 179 HQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSEE 258 (386)
T ss_pred HHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeeeCCccCCCCcceeEEEEecHH
Confidence 00 0 0000124666666665543
Q ss_pred CCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCC
Q 016094 230 DVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPG 307 (395)
Q Consensus 230 ~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~ 307 (395)
... .+.++...+.+.+... ..... .......+++++|+++|+++ +|| ++-+|-.
T Consensus 259 ~A~~~~~~~~~~i~g~g~~~--------------------~~~~~---~~~~~~~a~~~a~~~Agi~~-~did~~e~~d~ 314 (386)
T TIGR01930 259 RAKELGLTPLARIVSFAVAG--------------------VDPEI---MGLGPVPAIPKALKKAGLSI-SDIDLFEINEA 314 (386)
T ss_pred HHHHCCCCccEEEEEEEEec--------------------CCCcc---ccccHHHHHHHHHHHcCCCH-HHCCeeehcch
Confidence 210 0011122333322110 00000 01123478899999999997 999 8888877
Q ss_pred ChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEE
Q 016094 308 GKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 308 ~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr 387 (395)
.....-...+.||+....+..+ --..-+||+..++-...+.++..+.. |+ .+ .+.|..+.+.|..-.+++++
T Consensus 315 fa~~~~~~~e~lG~~~~pvn~~-GG~l~~Ghp~gasG~~~~~e~~~qL~--g~--~~---~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 315 FAAQVLACIKELGLDLEKVNVN-GGAIALGHPLGASGARIVTTLLHELK--RR--GG---RYGLATICIGGGQGIAVILE 386 (386)
T ss_pred hHHHHHHHHHHhCCChhhcCCC-CChHhhCCcHHHHHHHHHHHHHHHHH--hc--CC---CEEEEEEeccCCceEEEEeC
Confidence 6555555678899854444332 12446899999998888888887622 21 23 67777667766565666653
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.6e-15 Score=144.75 Aligned_cols=251 Identities=18% Similarity=0.182 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C--CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-V--DMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~--~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++|+++++||.|+++++.+ . ..+..+..++..||++..+ ++.++.+|+++..+|..|..+|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIP--ATRVEAACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCC--eeEEeCCcHHHHHHHHHHHHHH
Confidence 789999999999999999999999999988765 3 2467788999999998555 7889999999999999999999
Q ss_pred HcCCCCeEEEEEeccccccc----------------CCCCchh-h--------------------------hh-------
Q 016094 180 ENNPGARVLVVCCDITVLHF----------------HEPTEAR-L--------------------------DM------- 209 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~~~----------------~~~~~~~-~--------------------------~~------- 209 (395)
++|.+++|||+++|.++... ..|.... + ..
T Consensus 100 ~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~n 179 (389)
T PRK06064 100 ASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGSKN 179 (389)
T ss_pred HCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhC
Confidence 99999999999999754210 0010000 0 00
Q ss_pred -------------------------hhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecC
Q 016094 210 -------------------------LVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEM 263 (395)
Q Consensus 210 -------------------------~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~ 263 (395)
......++|||+|+||++.+... .+. ....+.+.+....+..
T Consensus 180 p~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~-~~v~I~g~g~~~~~~~----------- 247 (389)
T PRK06064 180 PYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTD-TPVWIKASGQASDTIA----------- 247 (389)
T ss_pred cHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcC-CCeEEEEEEEecCccc-----------
Confidence 00122569999999999765321 111 1234554432211100
Q ss_pred ceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc----------------cc
Q 016094 264 GWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE----------------KL 326 (395)
Q Consensus 264 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e----------------k~ 326 (395)
+...+++. .......+++++|+++|+++ +|| ++-+|-......-...+.||+.+. ++
T Consensus 248 ---~~~~~~~~--~~~~~~~a~~~al~~aGi~~-~did~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~ 321 (389)
T PRK06064 248 ---LHDRKDFT--TLDAAVVAAEKAYKMAGIEP-KDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDI 321 (389)
T ss_pred ---cccccccc--ccHHHHHHHHHHHHHcCCCH-HHCCEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe
Confidence 00001111 01233467889999999997 999 999999887776677899998652 22
Q ss_pred hHHHHH---HHhcCCCCcchHHHHHHHHHhhhhhh-----hcccCCCCCceEEEEEEccc
Q 016094 327 GASRYA---LSEYGNLGAPSVLFILDDVRKKSTEE-----RKATTGEGLEYGVLFGFGPG 378 (395)
Q Consensus 327 ~~~~~~---~~~~Gn~~sasi~~~L~~~~~~~~~~-----g~l~~G~~~d~vll~~~G~G 378 (395)
+.| . .--+||...++-+..+.++..+...+ .++. | .++.+..++|..
T Consensus 322 pvN--~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~rqv~-~--a~~~l~~~~g~~ 376 (389)
T PRK06064 322 PVN--PSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQQVI-G--AGYGLTHNVGGT 376 (389)
T ss_pred eec--CCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCCccCC-C--ccEEEEecCCCc
Confidence 222 1 12389999888888888777652211 1121 3 377788887743
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.7e-15 Score=148.24 Aligned_cols=94 Identities=15% Similarity=0.095 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCC-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMP-GADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p-~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|+++++||.||+++.++ ...| ..+..++..+|++...+ +++++.+|+|++.||.+|.++|+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p-~~~V~~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVP-GMTVNRFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCc-eeeecchhhHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999887 4444 48889999999985343 89999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 016094 181 NNPGARVLVVCCDITVL 197 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~ 197 (395)
+|.++.||++++|++|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999874
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.8e-15 Score=144.19 Aligned_cols=94 Identities=13% Similarity=0.045 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VD-MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
+.+|+.+|++++|+++|++|++||.||+++.++ .. .+..+...+..+|++...+ +++++.+|+|++.||.+|.++|+
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~p-a~~Vn~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVP-GVQINRFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCC-eEEEcchhhhHHHHHHHHHHHHH
Confidence 889999999999999999999999999999987 33 3456677778899965443 89999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 016094 181 NNPGARVLVVCCDITVL 197 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~ 197 (395)
+|..+.||++++|++|.
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999874
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-14 Score=135.05 Aligned_cols=245 Identities=16% Similarity=0.128 Sum_probs=157.0
Q ss_pred HhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 101 EEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 101 ~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
+...+|+.+|+++||+++|++++|||.++.++.+.+..|+ ..+++.||++ ++.+.++|+++..||.+|..+|+
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP-----~~gV~gACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP-----YLGLFGACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC-----ccceeecCHHHHHHHHHHHHHHH
Confidence 3477999999999999999999999999999987655555 4999999954 57899999999999999999999
Q ss_pred cCCCCeEEEEEeccccc---ccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCcee
Q 016094 181 NNPGARVLVVCCDITVL---HFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVV 257 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~---~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~ 257 (395)
+|.+++||++++-+... +|+-|.+-.-+...+...---||+|+||++.... +...-...|.. ++
T Consensus 125 SG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~~~-----~~i~~~T~Gkv--------~D 191 (334)
T PRK12404 125 SGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGDG-----PRVTSATIGRV--------VD 191 (334)
T ss_pred cCCCCEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCCCC-----ceEEEEEEEEE--------Ee
Confidence 99999999999888652 4655543211112233334568899999886432 12221211110 11
Q ss_pred eeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcC---CChHHHHHHHHHcCCCc-ccchHHH--
Q 016094 258 GHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHP---GGKVILDQVEQNLGLGK-EKLGASR-- 330 (395)
Q Consensus 258 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~---~~~~~~~~i~~~lgi~~-ek~~~~~-- 330 (395)
+.+.+ -+.||. .+.....+.|.+.|++.|.++ +|. .++.-- .+++++..+.++-|++. ++.+.+.
T Consensus 192 ~g~~d---~~nMGa----aMAPAA~dti~~h~~d~~~~~-~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DCG~ 263 (334)
T PRK12404 192 MGLTD---PFNMGG----AMAPAAVDTIEAHLRDRQIDA-SYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDCGL 263 (334)
T ss_pred cCCCC---cccchh----hhhHHHHHHHHHHHHHhCCCh-hhccEEEEcchHHHHHHHHHHHHHHcCCCCCcccccccCe
Confidence 11111 122322 223344567788999999997 887 555533 56788888887777764 3222110
Q ss_pred HHH-----HhcCCCCcchHHHHHH-HHHhhhhhhhcccCCCCCceEEEEEEcccce
Q 016094 331 YAL-----SEYGNLGAPSVLFILD-DVRKKSTEERKATTGEGLEYGVLFGFGPGIT 380 (395)
Q Consensus 331 ~~~-----~~~Gn~~sasi~~~L~-~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~ 380 (395)
.++ -.-|-.|++-.-.++. +++++ ++.| ...+||+++.|+=++
T Consensus 264 ~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~------~~~g-~~~rvL~v~TGALlS 312 (334)
T PRK12404 264 LIYREGQPVIAGASGPGCSATVTYGHLLNR------MKRG-ELKRILVVATGALLS 312 (334)
T ss_pred EEecCCCcccCCCcccchHHHHHHHHHHHH------HhcC-CceEEEEEEchhhcC
Confidence 000 1224444444444444 44443 3334 125899999997443
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.6e-15 Score=145.24 Aligned_cols=253 Identities=18% Similarity=0.139 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEP-SVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~-~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|++++|||.||+++.++ ...+..+..++..+|++. .+ .++++.+|+|++.+|..|.++|+
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~--~~~v~~~Casg~~al~~A~~~I~ 103 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVP--ALTINKVCGSGLKAVALAAQAIR 103 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCc--eeeecccchHHHHHHHHHHHHHH
Confidence 889999999999999999999999999988765 334455556777889874 44 78999999999999999999999
Q ss_pred cCCCCeEEEEEecccccc-c--C--------------C------CCch-------------------hh-----------
Q 016094 181 NNPGARVLVVCCDITVLH-F--H--------------E------PTEA-------------------RL----------- 207 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~-~--~--------------~------~~~~-------------------~~----------- 207 (395)
+|.+++|||+++|.++.. . . + +.+. ++
T Consensus 104 sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~~ 183 (393)
T PRK05790 104 AGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALASQ 183 (393)
T ss_pred cCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 999999999999976421 0 0 0 0000 00
Q ss_pred ----hhhh------------------------------------------------------hhhhhccccEEEEEecCC
Q 016094 208 ----DMLV------------------------------------------------------GQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 208 ----~~~~------------------------------------------------------~~~l~GDGAaA~vL~~~~ 229 (395)
.++. ....++|||+|+||++++
T Consensus 184 ~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s~e 263 (393)
T PRK05790 184 QKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEA 263 (393)
T ss_pred HHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEecHH
Confidence 0000 012446788887777654
Q ss_pred CCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCC
Q 016094 230 DVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPG 307 (395)
Q Consensus 230 ~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~ 307 (395)
... .+..+...+.+.+.... ..... ......+++++|+++|+++ +|| ++-+|-.
T Consensus 264 ~a~~~~~~~~~~I~g~~~~~~--------------------~~~~~---~~~~~~a~~~a~~~Agi~~-~did~~e~~d~ 319 (393)
T PRK05790 264 KAKELGLTPLARIVSYAVAGV--------------------DPAIM---GIGPVPAIRKALEKAGWSL-ADLDLIEINEA 319 (393)
T ss_pred HHHHCCCCeeEEEEEEEEccC--------------------CCCcc---chhHHHHHHHHHHHcCCCH-HHCCEEEeCcH
Confidence 211 10112224444322100 00001 0123467899999999997 999 8888876
Q ss_pred ChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEE
Q 016094 308 GKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 308 ~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr 387 (395)
.....-.+.+.||+.+.++..+ --.--+||...|+-...+.++..+.. + +.+ .+.|....|.|..-++++|+
T Consensus 320 f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~--~--~~~---~~gl~~~~~~~g~g~~~~~e 391 (393)
T PRK05790 320 FAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMK--R--RGA---KKGLATLCIGGGQGVALIVE 391 (393)
T ss_pred HHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHH--h--cCC---CeEEEEEeccCCceeEEEEE
Confidence 5444556778899876665543 23456899999998888888887621 1 122 56677777777777788887
Q ss_pred ec
Q 016094 388 SI 389 (395)
Q Consensus 388 ~~ 389 (395)
.+
T Consensus 392 ~~ 393 (393)
T PRK05790 392 RP 393 (393)
T ss_pred cC
Confidence 53
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1e-14 Score=144.21 Aligned_cols=94 Identities=14% Similarity=0.118 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.||+++.++ ...+..+..++..+|++...+ +++++.+|+|++.||..|.++|++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p-~~~V~~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQ-TETVNKVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcc-eeehhhhhhHHHHHHHHHHHHHHC
Confidence 889999999999999999999999999998875 224456667899999974332 899999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|.+++|||+++|+++.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999998874
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-14 Score=142.44 Aligned_cols=255 Identities=16% Similarity=0.107 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.++++++.+ ...+..+..++..||++..+ .+.++.+|++++.+|..|.++|++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKP--ATRVEAAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcc--eeeEeCccHHHHHHHHHHHHHHHh
Confidence 889999999999999999999999999988766 43577889999999997555 789999999999999999999999
Q ss_pred CCCCeEEEEEeccccccc-----C----C-------CCch-hh-h-----------------------------------
Q 016094 182 NPGARVLVVCCDITVLHF-----H----E-------PTEA-RL-D----------------------------------- 208 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~~-----~----~-------~~~~-~~-~----------------------------------- 208 (395)
|.++.||++++|.++... . + +... .+ .
T Consensus 94 G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~np 173 (375)
T cd00829 94 GLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARNP 173 (375)
T ss_pred CCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCC
Confidence 999999999999876310 0 0 0000 00 0
Q ss_pred -----------------------hhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCceeeeEecCce
Q 016094 209 -----------------------MLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGW 265 (395)
Q Consensus 209 -----------------------~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~ 265 (395)
.......++|||+|+||++++.......+...+.+.+....+..
T Consensus 174 ~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~~~~~~~i~g~~~~~~~~~------------- 240 (375)
T cd00829 174 YAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAASDTPS------------- 240 (375)
T ss_pred hhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhcCCCCeEEEEEEEecCCcc-------------
Confidence 00011346999999999986532100112334444332211000
Q ss_pred eEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc------------------cc
Q 016094 266 DYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE------------------KL 326 (395)
Q Consensus 266 ~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e------------------k~ 326 (395)
+. ....+ ........+++++|+++|+++ +|| ++=+|-......-...+.||+.+. ++
T Consensus 241 -~~-~~~~~-~~~~~~~~a~~~al~~Agl~~-~did~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pv 316 (375)
T cd00829 241 -LS-ERDDF-LSLDAARLAARRAYKMAGITP-DDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLPV 316 (375)
T ss_pred -cc-ccccc-cccHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCccc
Confidence 00 00000 112334578899999999997 999 999999888888888999999863 22
Q ss_pred hHHHHHHHhcCCCCcchHHHHHHHHHhhhhh---hhcccCCCCCceEEEEEEcccce
Q 016094 327 GASRYALSEYGNLGAPSVLFILDDVRKKSTE---ERKATTGEGLEYGVLFGFGPGIT 380 (395)
Q Consensus 327 ~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~---~g~l~~G~~~d~vll~~~G~G~~ 380 (395)
..+ -=.-.+||...++-+..+.++..+... +.+++.. +..+..+.|...+
T Consensus 317 N~~-GG~la~Ghp~gatG~~~~~e~~~qlrg~ag~~qv~~~---~~~l~~~~gg~~~ 369 (375)
T cd00829 317 NTS-GGLLSKGHPLGATGLAQAVEAVRQLRGEAGARQVPGA---RVGLAHNIGGTGS 369 (375)
T ss_pred cCC-CchhcCCCCccHHHHHHHHHHHHHhcCCcccccCCCc---cEEEEecCCCccc
Confidence 221 012337999988887777776665221 1122222 5666666664333
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.6e-15 Score=147.42 Aligned_cols=257 Identities=16% Similarity=0.113 Sum_probs=167.6
Q ss_pred HhHHHHHHHHHHHHHHHcCCCCCC-cC----EEEEEecCC------------------C----CC---CCHHHHHHHHcC
Q 016094 101 EEVPKLGKEAALKAIKEWGQPVSK-IT----HLIFGAVYG------------------V----DM---PGADVRLMNLLG 150 (395)
Q Consensus 101 ~~~~~la~~Aa~~aL~~agi~~~~-Id----~li~~s~~~------------------~----~~---p~~a~~l~~~LG 150 (395)
.....|+..|+++||+++|+++++ ++ .+++++... + .+ ...+.+++..+|
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 70 DRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred CHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC
Confidence 456789999999999999998766 44 455555421 0 11 456788999999
Q ss_pred C-CCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----c----------------CCCCchhhhh
Q 016094 151 L-EPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----F----------------HEPTEARLDM 209 (395)
Q Consensus 151 l-~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----~----------------~~~~~~~~~~ 209 (395)
+ +.. .+.+..+|+|++.||..|.++|++|.++.+||+++|..+.. | ..|. ..
T Consensus 150 l~~Gp---~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pf----d~ 222 (407)
T cd00828 150 SSHGP---IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPF----DE 222 (407)
T ss_pred cCCCC---CcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCC----cC
Confidence 9 654 68899999999999999999999999999999999986510 0 0111 12
Q ss_pred hhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHh
Q 016094 210 LVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADA 288 (395)
Q Consensus 210 ~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 288 (395)
...++++||||+++||++.+... .|.+...++.+.+... ++.+... .. ..+.+.++++++
T Consensus 223 ~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~--------------d~~~~~~-~~----~~~~~~~a~~~A 283 (407)
T cd00828 223 TRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTT--------------DGAGRSV-PA----GGKGIARAIRTA 283 (407)
T ss_pred CCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEecc--------------CCCCCCC-CC----ChHHHHHHHHHH
Confidence 23578999999999999865421 1111223444332211 1111100 11 234566789999
Q ss_pred hcccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhccc
Q 016094 289 MSPIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362 (395)
Q Consensus 289 L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~ 362 (395)
|+++|+++ +|| ++..|..+....+ .+.+.++-..+.++.+ .+-..+||+.+|+-++.|...+.. ++++.+.
T Consensus 284 l~~Agi~~-~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~Gh~~~Asg~~~l~~~~~~-l~~~~ip 360 (407)
T cd00828 284 LAKAGLSL-DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVT-AQKALFGHSKGAAGALQLIGALQS-LEHGLIP 360 (407)
T ss_pred HHHcCCCH-HHcCEEecccccCccccHHHHHHHHHHHhccCCCceee-cccchhccchhhhhHHHHHHHHHH-HhcCccC
Confidence 99999997 999 9999987664433 3444454321222221 257789999999998888765432 1113222
Q ss_pred CCC-------------------C----CceEEEEEEcccceeeeeeE
Q 016094 363 TGE-------------------G----LEYGVLFGFGPGITVETVVL 386 (395)
Q Consensus 363 ~G~-------------------~----~d~vll~~~G~G~~~~a~ll 386 (395)
+-- . ..+++..+||.|..-+++++
T Consensus 361 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 361 PTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CCCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 100 0 04678888998887777654
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.8e-15 Score=147.83 Aligned_cols=264 Identities=15% Similarity=0.184 Sum_probs=167.5
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC-C-------------------------CCC-CHHHHHHHH
Q 016094 100 IEEVPKLGKEAALKAIKEWGQPVSKITH----LIFGAVYG-V-------------------------DMP-GADVRLMNL 148 (395)
Q Consensus 100 ~~~~~~la~~Aa~~aL~~agi~~~~Id~----li~~s~~~-~-------------------------~~p-~~a~~l~~~ 148 (395)
......|+.+|+++||+++|++++++|. +++++... . ..+ ..+.+++..
T Consensus 68 ~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 147 (407)
T TIGR03150 68 MDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIR 147 (407)
T ss_pred cCHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHH
Confidence 3456789999999999999999999885 66665321 0 011 245679999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cC---C--CCch--hhhhhh
Q 016094 149 LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FH---E--PTEA--RLDMLV 211 (395)
Q Consensus 149 LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~---~--~~~~--~~~~~~ 211 (395)
+|++.. .+.+..+|+|++.||..|..+|++|.++.+||+++|..... +. + +... .+....
T Consensus 148 ~gl~g~---~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~ 224 (407)
T TIGR03150 148 YGAKGP---NHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR 224 (407)
T ss_pred hCCCCc---ccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC
Confidence 999654 57889999999999999999999999999999999974210 00 0 0000 011112
Q ss_pred hhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhc
Q 016094 212 GQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMS 290 (395)
Q Consensus 212 ~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 290 (395)
.++++||||+|+||++.+... .|.+....+.+.+... ++.... .+. + ......++++++|+
T Consensus 225 ~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~--------------d~~~~~-~~~-~--~~~~~~~ai~~Al~ 286 (407)
T TIGR03150 225 DGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSG--------------DAYHIT-APA-P--EGEGAARAMRAALK 286 (407)
T ss_pred CcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECC--------------CCCCCC-CCC-C--CcHHHHHHHHHHHH
Confidence 468899999999999865321 1111233444432211 000000 000 0 11234578899999
Q ss_pred ccCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC-
Q 016094 291 PIGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT- 363 (395)
Q Consensus 291 ~~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~- 363 (395)
++|+++ +|| ++.+|-.+... ...+.+.++-...+++.+ ..-..+||+.+|+-.+.|..++... .++.+.+
T Consensus 287 ~Agi~~-~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~~~~~~~l-~~~~ipp~ 363 (407)
T TIGR03150 287 DAGINP-EDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVS-STKSMTGHLLGAAGAIEAIFTVLAI-RDGVVPPT 363 (407)
T ss_pred HcCCCH-hHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCcee-CCcchhchhHHHHHHHHHHHHHHHH-hcCCcCCC
Confidence 999997 999 99999887633 445666776543344432 1345679998888776665544321 1122211
Q ss_pred -------------------CC-CCceEEEEEEcccceeeeeeEE
Q 016094 364 -------------------GE-GLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 364 -------------------G~-~~d~vll~~~G~G~~~~a~llr 387 (395)
+. ...+++.-+||.|.+-.+++|+
T Consensus 364 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 364 INLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 10 0146788889988888887764
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.9e-15 Score=144.80 Aligned_cols=94 Identities=17% Similarity=0.099 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCcCEEEEEecCC-CCCCCHHHH-HHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEW-GQPVSKITHLIFGAVYG-VDMPGADVR-LMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~a-gi~~~~Id~li~~s~~~-~~~p~~a~~-l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++ |++++|||.||++++++ ...+....+ +...+|++...+ +++++.+|+|++.|+..|..+|
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p-~~~V~~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVG-GVTVNRFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCc-eeeecchhhHHHHHHHHHHHHH
Confidence 8899999999999997 99999999999998876 444444444 556669985232 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
++|..+.||++++|++|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999998763
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.9e-14 Score=141.69 Aligned_cols=94 Identities=16% Similarity=0.125 Sum_probs=85.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEP-SVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~-~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
+..+|+.+|+++||+++|++++|||.||++++++ ...|..+..++..+|++. .+ +++++.+|+|++.++..|.++|
T Consensus 25 ~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p--~~~V~~~CaSg~~Al~~A~~~I 102 (404)
T PRK06205 25 PAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVP--GMQLDRRCGSGLQAVITAAMQV 102 (404)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc--eeehhhhhhHHHHHHHHHHHHH
Confidence 3889999999999999999999999999999887 556778888999999984 44 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
++|.++.|||+++|+++.
T Consensus 103 ~sG~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 103 QTGAADVVIAGGAESMSN 120 (404)
T ss_pred HcCCCCEEEEeeehhhcc
Confidence 999999999999998773
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-14 Score=142.06 Aligned_cols=93 Identities=18% Similarity=0.169 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.||+++..+ ......+...+..+|++...+ ++.++.+|+|++.|+..|.++|++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p-~~~V~~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVG-CTTVNKMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCcc-EeeccccchHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998775 333344444555667775333 899999999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 016094 182 NPGARVLVVCCDITV 196 (395)
Q Consensus 182 g~~~~vLvv~~e~~s 196 (395)
|.++.||++++|+++
T Consensus 110 G~~d~vLv~G~E~ms 124 (397)
T PRK06954 110 GSVDVIVAGGMESMT 124 (397)
T ss_pred CCCCEEEEEeeeccC
Confidence 999999999999987
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.2e-14 Score=134.25 Aligned_cols=307 Identities=19% Similarity=0.199 Sum_probs=196.4
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
+++|.+|-.|+|.+.|+++|++..- +. +. .++--..|..+--|+.+.|+
T Consensus 11 dvGI~aieiyfP~~yV~Q~elEk~d-~v--s~---------gKytIGLGq~~MgfcsdrED------------------- 59 (462)
T KOG1393|consen 11 DVGIIAIEIYFPSQYVDQEELEKFD-GV--SA---------GKYTIGLGQTQMGFCSDRED------------------- 59 (462)
T ss_pred ccceeEEEEEcCccccChhhHhhcC-Cc--cc---------cceEeccCcceecccCchhh-------------------
Confidence 3899999999999999999998762 11 11 22323456666666665553
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcC--CCCccccceeeccccchHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLG--LEPSVNRLMIYSQGCYMGGAVIR 173 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LG--l~~~~~~~~~i~~~C~s~~~al~ 173 (395)
...|+..++.+++++..++++.|..|-++|.|- .-..+.-..|.+.++ -..... ..|..++|.|+..||-
T Consensus 60 ------i~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIE-GiDttnACYGGtaALf 132 (462)
T KOG1393|consen 60 ------IISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIE-GIDTTNACYGGTAALF 132 (462)
T ss_pred ------hhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccc-cccccccccccHHHHH
Confidence 778999999999999999999999999999987 556666667776665 222332 6788999999999999
Q ss_pred HHHHHHHcCC--CCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc-----
Q 016094 174 HAKDIAENNP--GARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----- 246 (395)
Q Consensus 174 ~A~~ll~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----- 246 (395)
.|..+|++.. .+.+|||++|.... +.. . ...+=|-||.|+||+++..-.+ + +. +.+...
T Consensus 133 navnWiESssWDGr~aivV~gDIAvY----~~G---~---aRpTGGAgAVAmLIgPnApi~f-e-rg--lr~thM~hayD 198 (462)
T KOG1393|consen 133 NAVNWIESSSWDGRYAIVVCGDIAVY----AKG---N---ARPTGGAGAVAMLIGPNAPIIF-E-RG--LRATHMQHAYD 198 (462)
T ss_pred HHhhhhhhcccCCceeEEEEeeEEEe----cCC---C---CCCCCCcceEEEEEcCCCceEe-c-cc--chhhhhhhhhh
Confidence 9999999874 58999999999752 111 0 1234599999999999765211 0 00 111110
Q ss_pred eecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHH--------HHHhhcccCCCCCCce-EEEEcCCChHHHHH-HH
Q 016094 247 MTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKL--------LADAMSPIGISDWNSL-FYIVHPGGKVILDQ-VE 316 (395)
Q Consensus 247 ~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~--------i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~-i~ 316 (395)
..-|+-...+ -+.-|+.-.......+..+ .++-.+.-+..+ ++. ++|+|.+--++... ++
T Consensus 199 FyKPdl~SEy---------PvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l-~~fdy~ifHsP~cKlvqKs~a 268 (462)
T KOG1393|consen 199 FYKPDLLSEY---------PVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNL-NSFDYIIFHSPYCKLVQKSLA 268 (462)
T ss_pred ccCCCCCCcC---------ceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccCCeEEEeCchhhhHHHHHH
Confidence 0112111000 0111222223333333222 222233334455 677 89999987655443 11
Q ss_pred HH-----------------------------------------cCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhh
Q 016094 317 QN-----------------------------------------LGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKS 355 (395)
Q Consensus 317 ~~-----------------------------------------lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~ 355 (395)
+- ..+-.+|+-.+.-.-.+.|||+++++...|..++...
T Consensus 269 rl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~ 348 (462)
T KOG1393|consen 269 RLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASLLSAV 348 (462)
T ss_pred HhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHHHHhcc
Confidence 10 0011111111100114889999999999999999862
Q ss_pred hhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 356 TEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 356 ~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
..+ --.| .+|.++++|+|+..+...+|+..
T Consensus 349 ~~d--~l~G---krig~FSYGSGlAAs~fs~~v~~ 378 (462)
T KOG1393|consen 349 PAD--ELAG---KRIGMFSYGSGLAASMFSLRVTQ 378 (462)
T ss_pred chh--hhhc---cEEEEEeecCcchhheEEEEecC
Confidence 111 1246 89999999999999999998875
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.8e-14 Score=137.33 Aligned_cols=232 Identities=15% Similarity=0.083 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.||+++..+ ...+..+..++..||+++.+ .++++.+|++++.+|..|..+|++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~--~~~v~~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKV--PLRVEAMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCC--eeEEeccCHHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999988765 22234578899999998766 689999999999999999999999
Q ss_pred CCCCeEEEEEecccccc----------------cC-CCCc---h------------------------------------
Q 016094 182 NPGARVLVVCCDITVLH----------------FH-EPTE---A------------------------------------ 205 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~----------------~~-~~~~---~------------------------------------ 205 (395)
|.+++|||+++|.++.. +. .|.. .
T Consensus 99 G~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~np 178 (385)
T PRK12578 99 GLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAMNP 178 (385)
T ss_pred CCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcCC
Confidence 99999999999976421 00 0000 0
Q ss_pred --------hhh------------hhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCc
Q 016094 206 --------RLD------------MLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMG 264 (395)
Q Consensus 206 --------~~~------------~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g 264 (395)
+.+ .......++|||+|+||++++... .+..+...+.+.+....+..
T Consensus 179 ~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~------------ 246 (385)
T PRK12578 179 KAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAY------------ 246 (385)
T ss_pred hhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCccc------------
Confidence 000 011233457999999999765221 11112334554432211110
Q ss_pred eeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc------------------c
Q 016094 265 WDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE------------------K 325 (395)
Q Consensus 265 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e------------------k 325 (395)
+...+++.. ......+++++|+++|+++ +|| ++-+|-....+--...+.||+.+. +
T Consensus 247 --~~~~~~~~~--~~~~~~a~~~al~~Agi~~-~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~p 321 (385)
T PRK12578 247 --VARRGEWVG--FKATQLAARQAYNMAKVTP-NDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVG 321 (385)
T ss_pred --ccccccccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCee
Confidence 000011111 1123467889999999997 999 889999887777777889998762 2
Q ss_pred chHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 326 LGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 326 ~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
+..+ ==.--+||...|+-+..+.++..+
T Consensus 322 vN~~-GG~la~GhP~gatG~~~v~e~~~q 349 (385)
T PRK12578 322 VNLF-GGLKAKGHPLGATGLSMIYEITKQ 349 (385)
T ss_pred eCCC-CCcccCCCCccHHHHHHHHHHHHH
Confidence 2221 002347999888888888777765
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.1e-14 Score=141.65 Aligned_cols=262 Identities=16% Similarity=0.155 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcC------------------EEEEEec---------------CC-C-------CCCCH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKIT------------------HLIFGAV---------------YG-V-------DMPGA 141 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id------------------~li~~s~---------------~~-~-------~~p~~ 141 (395)
...|+..|+++||+++|+++.+++ .++.++. .+ . ..|..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 456889999999999998644322 1222211 01 1 34567
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccc---------------ccccCC-CCch
Q 016094 142 DVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDIT---------------VLHFHE-PTEA 205 (395)
Q Consensus 142 a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~---------------s~~~~~-~~~~ 205 (395)
+.+|+..+|++.. .+++..+|+|++.||..|.++|++|.++.+||+++|.. +. ..+ +...
T Consensus 155 a~~i~~~~gl~G~---~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~-~~~~~~~~ 230 (425)
T PRK06501 155 ADRLADRFGTRGL---PISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALST-QNDPPEKA 230 (425)
T ss_pred HHHHHHHhCCCCC---ceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhcccc-CCCCCCcc
Confidence 8899999999764 68899999999999999999999999999999999941 11 111 1100
Q ss_pred --hh-hhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhH
Q 016094 206 --RL-DMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYI 281 (395)
Q Consensus 206 --~~-~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~ 281 (395)
.+ .++ .++++||||+++||++.+... .|.+....+.+.+.. . ++++.. ...+ ....+
T Consensus 231 ~rpfd~~r-~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~----~----------d~~~~~--~~~~--~~~~~ 291 (425)
T PRK06501 231 SKPFSKDR-DGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEK----A----------DSFHRT--RSSP--DGSPA 291 (425)
T ss_pred cCCCCCCC-CCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEc----c----------CCCCCC--CCCC--CHHHH
Confidence 01 123 469999999999999865321 101111233332211 0 010000 0001 12346
Q ss_pred HHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhh
Q 016094 282 DKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKS 355 (395)
Q Consensus 282 ~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~ 355 (395)
.++++++|+++|+++ +|| ++.+|-.+....+. +.+.++-....++.+ ..-..+||+.+|+-.+.|...+..
T Consensus 292 ~~ai~~AL~~agi~p-~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~-s~k~~~Gh~~~AsG~~~~~~~~l~- 368 (425)
T PRK06501 292 IGAIRAALADAGLTP-EQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVS-SNKSMIGHTLTAAGAVEAVFSLLT- 368 (425)
T ss_pred HHHHHHHHHHcCCCH-HHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEE-CCCcccCCCchhhhHHHHHHHHHH-
Confidence 688999999999997 999 99999988766554 344555322233221 134578999988877776543221
Q ss_pred hhhhcccCC---------------------CCCceEEEEEEcccceeeeeeEEecc
Q 016094 356 TEERKATTG---------------------EGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 356 ~~~g~l~~G---------------------~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
+.++.+.+- ...+.++.-+||-|..-++++|+..+
T Consensus 369 l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 369 IQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred HhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 111333220 01146778889999999999998653
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-13 Score=138.23 Aligned_cols=264 Identities=17% Similarity=0.189 Sum_probs=168.4
Q ss_pred HhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------------CCC-CHHHHHHHHc
Q 016094 101 EEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V-------------------------DMP-GADVRLMNLL 149 (395)
Q Consensus 101 ~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~-------------------------~~p-~~a~~l~~~L 149 (395)
.....++..|+.+||+++|+++++.+ +|++++..+ . ..+ ..+.+++..+
T Consensus 72 d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (414)
T PRK08722 72 DLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMR 151 (414)
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHh
Confidence 34567889999999999999765443 466666421 1 112 3678899999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------C-----CCCch--hhhhhhh
Q 016094 150 GLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHF----------H-----EPTEA--RLDMLVG 212 (395)
Q Consensus 150 Gl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~----------~-----~~~~~--~~~~~~~ 212 (395)
|+++. .+.+..+|++++.||..|.++|++|.++.+||+++|.....+ . +|... .++....
T Consensus 152 gl~Gp---~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~ 228 (414)
T PRK08722 152 GLRGP---NIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRD 228 (414)
T ss_pred CCCCC---ccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCC
Confidence 99986 578999999999999999999999999999999999754210 0 01111 0112236
Q ss_pred hhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcc
Q 016094 213 QAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSP 291 (395)
Q Consensus 213 ~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ 291 (395)
+++.||||+++||++.+... .|.+...++.+.+.. .++.++. .+.. .......+++++|++
T Consensus 229 G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~--------------~d~~~~~-~p~~---~~~~~~~a~~~Al~~ 290 (414)
T PRK08722 229 GFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMS--------------GDAYHMT-SPSE---DGSGGALAMEAAMRD 290 (414)
T ss_pred ceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEc--------------CCCCCCC-CCCc---chHHHHHHHHHHHHH
Confidence 78999999999999865421 111223344443211 0111111 0110 122345678899999
Q ss_pred cCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCC-cccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC-
Q 016094 292 IGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLG-KEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT- 363 (395)
Q Consensus 292 ~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~-~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~- 363 (395)
+|+++ +|| ++-.|-.+... .+.+.+.+|-. .++++.+ .+-..+||+.+|+-.+.|...+.. ++++.+.|
T Consensus 291 agi~~-~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~-l~~~~ipp~ 367 (414)
T PRK08722 291 AGVTG-EQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVS-STKSMTGHLLGAAGSVEAIITVMS-LVDQIVPPT 367 (414)
T ss_pred cCCCH-HHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceee-CcccccccchHHHHHHHHHHHHHH-HhcCccCCC
Confidence 99997 999 99999877554 33456666632 2233332 145689999999877766433221 01132221
Q ss_pred ----------------C-----CCCceEEEEEEcccceeeeeeEEe
Q 016094 364 ----------------G-----EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 364 ----------------G-----~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
. ....+++.-+||-|.+-++++|+.
T Consensus 368 ~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 368 INLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred CCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 0 012567888899999988988874
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.9e-14 Score=140.84 Aligned_cols=264 Identities=16% Similarity=0.178 Sum_probs=168.9
Q ss_pred HhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC----------------------C----CCC-CHHHHHHHHc
Q 016094 101 EEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG----------------------V----DMP-GADVRLMNLL 149 (395)
Q Consensus 101 ~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~----------------------~----~~p-~~a~~l~~~L 149 (395)
.....|+..|+++||+++|++++++| .+++++... + ..+ ..+.+++..+
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 70 DRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 34678999999999999999998888 577766421 0 111 2457899999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c----------CCCCch--hhhhhhh
Q 016094 150 GLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F----------HEPTEA--RLDMLVG 212 (395)
Q Consensus 150 Gl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~----------~~~~~~--~~~~~~~ 212 (395)
|+... .+.+..+|+|++.||..|..+|++|.++.|||+++|..... | .+|... .+.....
T Consensus 150 gl~Gp---~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~d 226 (411)
T PRK07314 150 GAKGP---NHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRD 226 (411)
T ss_pred CCCCc---cccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCC
Confidence 99765 57888999999999999999999999999999999864321 0 011100 0111124
Q ss_pred hhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcc
Q 016094 213 QAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSP 291 (395)
Q Consensus 213 ~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ 291 (395)
++++||||+++||++.+... .+......+.+.+... ++.++.. +. ........+++++|++
T Consensus 227 G~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~--------------d~~~~~~-~~---~~~~~~~~a~~~Al~~ 288 (411)
T PRK07314 227 GFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTG--------------DAYHMTA-PA---PDGEGAARAMKLALKD 288 (411)
T ss_pred CEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCCC-CC---CCcHHHHHHHHHHHHH
Confidence 68999999999999865321 1111233454433211 0100000 00 0112334688899999
Q ss_pred cCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC--
Q 016094 292 IGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT-- 363 (395)
Q Consensus 292 ~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-- 363 (395)
+|+++ +|| ++-.|-.+....+ .+.+.++....+++.+ ..-..+||+.+|+-.+.|...+.. ++++.+.|
T Consensus 289 agi~~-~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~i~~~l~-l~~~~ipp~~ 365 (411)
T PRK07314 289 AGINP-EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVS-STKSMTGHLLGAAGAVEAIFSVLA-IRDQVIPPTI 365 (411)
T ss_pred cCCCH-HHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeE-CccchhchhHHHHHHHHHHHHHHH-HhCCCcCCCC
Confidence 99997 999 9999988765533 4556666443444332 134568999888766665443321 11133322
Q ss_pred ---------------C----CCCceEEEEEEcccceeeeeeEEe
Q 016094 364 ---------------G----EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 364 ---------------G----~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+ .+.++++.-+||-|..-++++|+.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 366 NLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred CCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence 0 012568888999999988999875
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.7e-13 Score=139.85 Aligned_cols=262 Identities=16% Similarity=0.156 Sum_probs=166.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCC---CcC----EEEEEecCC-C------------------------CCC-CHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVS---KIT----HLIFGAVYG-V------------------------DMP-GADVRLMNL 148 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~---~Id----~li~~s~~~-~------------------------~~p-~~a~~l~~~ 148 (395)
....++..|+++||+++|++++ +++ .|++++..+ . ..+ ..+..|+..
T Consensus 198 ~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 198 KFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 3557889999999999999764 222 566666532 1 011 235678899
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c----------CCCCch--hhhhhh
Q 016094 149 LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F----------HEPTEA--RLDMLV 211 (395)
Q Consensus 149 LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~----------~~~~~~--~~~~~~ 211 (395)
+|+... .+.+..+|+++..||..|.++|++|.++.+|+.++|..... | .+|... .++...
T Consensus 278 ~gl~Gp---~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWMGP---NYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCCCC---ccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 999875 57899999999999999999999999999999999963210 0 011100 011122
Q ss_pred hhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhc
Q 016094 212 GQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMS 290 (395)
Q Consensus 212 ~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 290 (395)
.++++|+||+++||++.+... .|.....++.+.+.. .++++++. +..-...+..+|+++|+
T Consensus 355 dGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s--------------~Da~~~t~----p~p~g~g~~~am~~AL~ 416 (540)
T PLN02787 355 DGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFT--------------CDAYHMTE----PHPEGAGVILCIEKALA 416 (540)
T ss_pred CCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEe--------------cCCCCCCC----CCcCHHHHHHHHHHHHH
Confidence 689999999999999865321 112123345443211 12222111 11112345578999999
Q ss_pred ccCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCC
Q 016094 291 PIGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTG 364 (395)
Q Consensus 291 ~~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G 364 (395)
++|+++ +|| |+-.|-.+.+. ...+.+.+|-.+ .++.+ .+-..+||+.+|+-.+.+...+.. +++|.+.|-
T Consensus 417 ~AGl~p-~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~pV~-S~Ks~iGH~~gAAGa~eli~~~la-l~~g~iPPt 492 (540)
T PLN02787 417 QSGVSK-EDVNYINAHATSTKAGDLKEYQALMRCFGQNP-ELRVN-STKSMIGHLLGAAGAVEAIATVQA-IRTGWVHPN 492 (540)
T ss_pred HcCCCH-HHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Cceee-CCCCCcCCCcccchHHHHHHHHHH-HhcCCcCCC
Confidence 999997 999 99999987654 345566676322 22221 145689999988866655443321 001333220
Q ss_pred ----------------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 365 ----------------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 365 ----------------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
...+.+|.-+||-|..-++++|+.
T Consensus 493 ~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 493 INLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred CCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 001456888899998888888874
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.57 E-value=4e-14 Score=141.74 Aligned_cols=230 Identities=16% Similarity=0.167 Sum_probs=149.4
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC-C-------------------CCCCHHHHHHHHcCCCCcc
Q 016094 100 IEEVPKLGKEAALKAIKEWGQPVSKITH----LIFGAVYG-V-------------------DMPGADVRLMNLLGLEPSV 155 (395)
Q Consensus 100 ~~~~~~la~~Aa~~aL~~agi~~~~Id~----li~~s~~~-~-------------------~~p~~a~~l~~~LGl~~~~ 155 (395)
......|+.+|+++||+++|+++++++. +++++..+ + ..+..+..++..+|+...
T Consensus 84 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g~- 162 (421)
T cd00833 84 MDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGP- 162 (421)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCCC-
Confidence 3456789999999999999999888773 66666532 1 113466789999999763
Q ss_pred ccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c-----CCCC--chhhhhhhhhhhhccccEEE
Q 016094 156 NRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F-----HEPT--EARLDMLVGQAIFGDGAAAA 223 (395)
Q Consensus 156 ~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~-----~~~~--~~~~~~~~~~~l~GDGAaA~ 223 (395)
.+.+..+|++++.||..|..+|++|.++.+||+++|..... | ..+. ...+.....++++||||+|+
T Consensus 163 --~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (421)
T cd00833 163 --SLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVV 240 (421)
T ss_pred --ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEE
Confidence 68899999999999999999999999999999999975310 0 0000 00011222478999999999
Q ss_pred EEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-E
Q 016094 224 IIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-F 301 (395)
Q Consensus 224 vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~ 301 (395)
||++.+.. ..+......+.+.+... ++.... ...+ ....+.++++++|+++|+++ +|| +
T Consensus 241 vL~~~~~A~~~g~~~~a~i~g~~~~~--------------~~~~~~--~~~p--~~~~~~~a~~~al~~Agi~~-~did~ 301 (421)
T cd00833 241 VLKRLSDALRDGDRIYAVIRGSAVNQ--------------DGRTKG--ITAP--SGEAQAALIRRAYARAGVDP-SDIDY 301 (421)
T ss_pred EEeeHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCC--CcCC--CHHHHHHHHHHHHHHhCCCH-HHCcE
Confidence 99986542 11111223444332110 000000 0001 13455688999999999997 999 9
Q ss_pred EEEcCCChHHH-----HHHHHHcCCC---cccchHHHHHHHhcCCCCcchHHHHHHHHH
Q 016094 302 YIVHPGGKVIL-----DQVEQNLGLG---KEKLGASRYALSEYGNLGAPSVLFILDDVR 352 (395)
Q Consensus 302 ~i~H~~~~~~~-----~~i~~~lgi~---~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~ 352 (395)
+.+|-.+.... +.+.+.++-. ...++.+ ..-..+||+.+|+-++.|...+
T Consensus 302 i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~-s~k~~~Gh~~~aag~~~l~~~~ 359 (421)
T cd00833 302 VEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIG-SVKSNIGHLEAAAGLAGLIKVV 359 (421)
T ss_pred EEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeee-cCcCccccchhhhHHHHHHHHH
Confidence 99999775443 3344444322 1122221 1345799999998887765543
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-13 Score=134.85 Aligned_cols=253 Identities=19% Similarity=0.189 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VD--MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~--~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++|++++|||.|++++ ++ +. .+..+..+++.||+.+.+ +++++.+|+++..++..|.++|
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~~~~--~~~v~~~casg~~al~~A~~~I 100 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGATGKP--LIRVHTAGSVGGSTAVVAASLV 100 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCCCCc--eEEEeccCHHHHHHHHHHHHHH
Confidence 789999999999999999999999999887 33 21 122347899999998766 7899999999999999999999
Q ss_pred HcCCCCeEEEEEecccccc-----------cC------------------------------------------CCC---
Q 016094 180 ENNPGARVLVVCCDITVLH-----------FH------------------------------------------EPT--- 203 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~~-----------~~------------------------------------------~~~--- 203 (395)
++|.+++||||++|+.+.. |. +|.
T Consensus 101 ~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A~~ 180 (386)
T PRK08313 101 QSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAHL 180 (386)
T ss_pred HCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHHhc
Confidence 9999999999999975321 10 010
Q ss_pred -c--hhhh------------hhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeE
Q 016094 204 -E--ARLD------------MLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDY 267 (395)
Q Consensus 204 -~--~~~~------------~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~ 267 (395)
+ .+.+ .......++|||+|+||.+++... .+..+...+.+.+....+.. +.
T Consensus 181 r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~-----~~-------- 247 (386)
T PRK08313 181 HQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLA-----FA-------- 247 (386)
T ss_pred CCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcc-----cc--------
Confidence 0 0000 112234568999999999864321 10112334444332211110 00
Q ss_pred EeCCcchHHHHHhHHHHHHHhhcccCCC--CCCce-EEEEcCCChHHHHHHHHHcCCCcc----------------cchH
Q 016094 268 TLSKDLPVIIGKYIDKLLADAMSPIGIS--DWNSL-FYIVHPGGKVILDQVEQNLGLGKE----------------KLGA 328 (395)
Q Consensus 268 ~~~~~v~~~~~~~~~~~i~~~L~~~g~~--~~~di-~~i~H~~~~~~~~~i~~~lgi~~e----------------k~~~ 328 (395)
.++.+. ......+.+++++++|++ + +|| .+=+|-.....--...+.||+.++ +++.
T Consensus 248 --~~~~~~--~~~~~~a~~~a~~~Agi~~p~-~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pv 322 (386)
T PRK08313 248 --GRDQVN--PQAGRDAAAALWKAAGITDPR-DEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLPV 322 (386)
T ss_pred --cccccc--cHHHHHHHHHHHHHcCCCCCh-hhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccc
Confidence 011111 123346888999999998 5 888 888888877777778899999865 2222
Q ss_pred H--HHHHHhcCCCCcchHHHHHHHHHhhhhh---hhcccCCCCCceEEEEEEccccee
Q 016094 329 S--RYALSEYGNLGAPSVLFILDDVRKKSTE---ERKATTGEGLEYGVLFGFGPGITV 381 (395)
Q Consensus 329 ~--~~~~~~~Gn~~sasi~~~L~~~~~~~~~---~g~l~~G~~~d~vll~~~G~G~~~ 381 (395)
| =-.+. ||-..++-+..+.++..+... +.+++ + .++.|..+.|.+...
T Consensus 323 N~~GG~l~--g~p~gatG~~~~~e~~~qlrG~ag~rQv~-~--a~~~l~~~~Gg~~~~ 375 (386)
T PRK08313 323 NPSGGVLS--SNPIGASGMIRFAEAALQVMGKAGEHQVD-G--ARKALGHAYGGGSQF 375 (386)
T ss_pred cCCCcccc--cCCCcHHHHHHHHHHHHHhcccccCCcCC-C--ccEEEEeccCCcceE
Confidence 1 00122 776666667777777665220 11222 2 267777777643333
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=135.07 Aligned_cols=93 Identities=17% Similarity=0.135 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VD-MPGADVRLMNLLGLEP-SVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~-~p~~a~~l~~~LGl~~-~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++|+.+++||.+++++..+ .. .+..+..++..+|++. .+ ++.++.+|+|++.|+..|..+|
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p--~~~V~~aCaSG~~Al~~A~~~I 104 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVP--AITINRYCSSGLQSIAYGAERI 104 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcc--eeehhhhhhHHHHHHHHHHHHH
Confidence 789999999999999998889999999998775 22 3677778999999985 44 8899999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
++|.++.+||+++|+++.
T Consensus 105 ~sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 105 MLGHSEAVIAGGAESMSL 122 (391)
T ss_pred HcCCCCEEEEEEEeeccc
Confidence 999999999999998763
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.6e-13 Score=133.89 Aligned_cols=274 Identities=17% Similarity=0.125 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|+++++||.||++++.+ +..+..+..++..||+++.+ +++++.+|++++.+|..|.++|+
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~--~~~v~~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAP--VSSSYAACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCc--eecccchhHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999887665 33345678999999997755 78899999999999999999999
Q ss_pred cCCCCeEEEEEeccccccc---------CC-------CCc---h------------------------------------
Q 016094 181 NNPGARVLVVCCDITVLHF---------HE-------PTE---A------------------------------------ 205 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~~---------~~-------~~~---~------------------------------------ 205 (395)
+|.+++|||+++|.++..+ .+ |.. .
T Consensus 101 sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s~e~~a~v~~~~~~~a~~Np 180 (399)
T PRK06059 101 AGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGATVEDFAQVKVKNARHGLLNP 180 (399)
T ss_pred CCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCc
Confidence 9999999999999765200 00 000 0
Q ss_pred --------hhhh------------hhhhhhhccccEEEEEecCCCCC-C--CCCCceEEEeecceecCCCCCceeeeEec
Q 016094 206 --------RLDM------------LVGQAIFGDGAAAAIIGADPDVS-L--NERPLFQVLSCSQMTVPNTENNVVGHLKE 262 (395)
Q Consensus 206 --------~~~~------------~~~~~l~GDGAaA~vL~~~~~~~-~--~~~~~~~l~~~~~~~~p~~~~~~~~~~~~ 262 (395)
+.++ .......+|||+|+||.+++... . +..+...+.+.+... +... ..+...
T Consensus 181 ~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~-~~~~--~~~~~~- 256 (399)
T PRK06059 181 NARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVT-PRYP--QHLPEL- 256 (399)
T ss_pred HhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEec-cccc--cccccc-
Confidence 0000 11223347999999998754211 1 011223344332211 0000 000000
Q ss_pred CceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-----------------
Q 016094 263 MGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE----------------- 324 (395)
Q Consensus 263 ~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e----------------- 324 (395)
..+........+.........+++++++++|+++ +|| .+=+|-.....--...+.||+.+.
T Consensus 257 ~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~-~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~ 335 (399)
T PRK06059 257 PDIATDSTAAVPAPERVFKDQILDAAYAEAGIGP-EDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGR 335 (399)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHcCCCH-HHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCC
Confidence 0000000000011001123457889999999997 999 888888754444445689998853
Q ss_pred -cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhh---hhcccCCCCCceEEEEEEcccceeeeeeEE
Q 016094 325 -KLGASRYALSEYGNLGAPSVLFILDDVRKKSTE---ERKATTGEGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 325 -k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~---~g~l~~G~~~d~vll~~~G~G~~~~a~llr 387 (395)
++..+ ==+--+||...++-...+.++..+... ..+++ | ..+.+....|.+...++++|+
T Consensus 336 ~pvN~~-GG~la~Ghp~gatG~~~~~e~~~qLrg~ag~~Qv~-~--a~~gl~~~~g~~g~~~~~~l~ 398 (399)
T PRK06059 336 IPVNPS-GGLACFGEAIPAQAIAQVCELTWQLRGQAGGRQVE-G--ARVGITANQGLFGHGSSVIVA 398 (399)
T ss_pred eeecCC-CccccCCccCCccHHHHHHHHHHHhccCcCCccCC-C--ccEEEEeccCCcccceEEEec
Confidence 11111 012347999998888888887775210 01122 2 145555544544455566654
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-13 Score=133.26 Aligned_cols=94 Identities=9% Similarity=-0.018 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VD-MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
+.+|+..+++.+|++++++|++||.||+++..+ -. .++++...+-..|++...+ .+.++..|+|++.|+.+|.+.|.
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp-~~tvnr~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKAS-GVTLDRFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCC-eeeeccccchHHHHHHHHHHHHH
Confidence 889999999999999999999999999999876 22 4789999999999998776 99999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 016094 181 NNPGARVLVVCCDITVL 197 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~ 197 (395)
+|..+.+|+.+.|.+|.
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999884
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.3e-13 Score=136.40 Aligned_cols=94 Identities=10% Similarity=0.031 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCC-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMP-GADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p-~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
+..+|+.+|+++||+++|++++|||.||+++..+ ...+ ..+..++..+|++...+ ++.++.+|+|++.++..|..+|
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~p-a~~V~~~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcc-eEEEeccCchHHHHHHHHHHHH
Confidence 4889999999999999999999999999988766 4333 34456778889986333 7899999999999999999999
Q ss_pred HcCCCCeEEEEEecccc
Q 016094 180 ENNPGARVLVVCCDITV 196 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s 196 (395)
++|.++.||+++.|.++
T Consensus 149 ~sG~~dvvLv~GvE~mS 165 (452)
T PLN02287 149 KAGFYDIGIGAGVESMT 165 (452)
T ss_pred HcCCCCeEEEEeEEecC
Confidence 99999999999999875
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.5e-13 Score=133.61 Aligned_cols=251 Identities=15% Similarity=0.121 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCC-CHH--HHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMP-GAD--VRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p-~~a--~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~l 178 (395)
..+|+.+|+++||+++|++++|||.+++++..+ ...| ..+ ..+...++ ...+ +++++.+|+|++.++..|.++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p-~~~V~~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIP-AMAVDRQCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCc-chhhhhhhHHHHHHHHHHHHH
Confidence 889999999999999999999999999998876 3223 222 23444444 2232 789999999999999999999
Q ss_pred HHcCCCCeEEEEEecccccc-c-------C------CCC----ch-------------------hhhh------------
Q 016094 179 AENNPGARVLVVCCDITVLH-F-------H------EPT----EA-------------------RLDM------------ 209 (395)
Q Consensus 179 l~~g~~~~vLvv~~e~~s~~-~-------~------~~~----~~-------------------~~~~------------ 209 (395)
|++|.+++||++++|+++.. + . ++. +. ++++
T Consensus 109 I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~A 188 (394)
T PRK06445 109 IATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQLA 188 (394)
T ss_pred HHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 99999999999999976621 0 0 000 00 0000
Q ss_pred -h-------------------------h----------------h--------------hhhhccccEEEEEecCCCCC-
Q 016094 210 -L-------------------------V----------------G--------------QAIFGDGAAAAIIGADPDVS- 232 (395)
Q Consensus 210 -~-------------------------~----------------~--------------~~l~GDGAaA~vL~~~~~~~- 232 (395)
. . . ...++|||+|+||++++...
T Consensus 189 ~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~ 268 (394)
T PRK06445 189 AKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKK 268 (394)
T ss_pred HHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEEEEecHHHHHH
Confidence 0 0 0 11114444444444332110
Q ss_pred CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHH
Q 016094 233 LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVI 311 (395)
Q Consensus 233 ~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~ 311 (395)
.+..+...+.+.+.. . .. +.........+++++|+++|+++ +|| ++=+|-.....
T Consensus 269 ~~~~~~a~i~g~~~~---------------------~-~~-~~~~~~~~~~a~~~al~~Agl~~-~dId~~e~~d~f~~~ 324 (394)
T PRK06445 269 YGLKPMAKIRSFGFA---------------------G-VP-PAIMGKGPVPASKKALEKAGLSV-KDIDLWEINEAFAVV 324 (394)
T ss_pred CCCCceEEEEEEEEe---------------------c-cC-CchhcchHHHHHHHHHHHcCCCH-HHcCEEEecccchHH
Confidence 000111122222111 0 00 11111234568899999999997 999 99999987777
Q ss_pred HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 312 LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 312 ~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
--...+.||++++++..+ --.--+||...|+-...+.++..+.. ++.+ .+.|....|.|..-.+++|+.
T Consensus 325 ~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~----~~~~---~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 325 VLYAIKELGLDPETVNIK-GGAIAIGHPLGATGARIVGTLARQLQ----IKGK---DYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred HHHHHHHhCCCccccCCC-CCHHHcCCCccchHHHHHHHHHHHHH----hcCC---CEEEEEEcccCChhhEEEEEc
Confidence 777889999998876553 12345899999998888888887621 2233 566777777777777777763
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.4e-13 Score=129.98 Aligned_cols=253 Identities=10% Similarity=0.040 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VD-MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
+.+|+.+|++++|+++|+++++||.+++++... .. ....+..+...+|++...+ ++.++++|+|++.|+..|.+.|+
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p-~~tV~~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVG-ATTIDCQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCc-eEEEecccccHHHHHHHHHHHHH
Confidence 789999999999999999999999999998654 22 2345667788899985343 88999999999999999999999
Q ss_pred cCCCCeEEEEEecccccc-cC-C-------CCc----h------------------hhhh--------hh----------
Q 016094 181 NNPGARVLVVCCDITVLH-FH-E-------PTE----A------------------RLDM--------LV---------- 211 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~-~~-~-------~~~----~------------------~~~~--------~~---------- 211 (395)
+|..+.||+++.|++|.. +. . ..+ . ++++ ..
T Consensus 105 sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~~d~~a~~sh~~a~~A~~~g~ 184 (387)
T PRK07850 105 AGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAWAEGR 184 (387)
T ss_pred CCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999998741 00 0 000 0 0000 00
Q ss_pred -------------------------------------------------------hhhhhccccEEEEEecCCCCC-CCC
Q 016094 212 -------------------------------------------------------GQAIFGDGAAAAIIGADPDVS-LNE 235 (395)
Q Consensus 212 -------------------------------------------------------~~~l~GDGAaA~vL~~~~~~~-~~~ 235 (395)
.....+|||+|+||.+++... .+.
T Consensus 185 f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~ 264 (387)
T PRK07850 185 FDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQISDGAAAVLWMDEDRARALGL 264 (387)
T ss_pred CcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCccchhcCCcCCceEEEEEecHHHHHHcCC
Confidence 011122444444444322110 000
Q ss_pred CCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH
Q 016094 236 RPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ 314 (395)
Q Consensus 236 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~ 314 (395)
.+...+.+.+. . +.+ +.........+++++|+++|+++ +|| .+=+|-......-.
T Consensus 265 ~p~~~i~g~~~---------------------~-~~~-~~~~~~~~~~a~~~al~~agl~~-~did~~ei~d~F~~~~l~ 320 (387)
T PRK07850 265 RPRARIVAQAL---------------------V-GAE-PYYHLDGPVQATAKVLEKAGMKI-GDIDLVEINEAFASVVLS 320 (387)
T ss_pred CCcEEEEEEEE---------------------e-ccC-chhhcchHHHHHHHHHHHcCCCH-HHcCeeeecccchHHHHH
Confidence 01122222110 0 000 11122334578899999999997 999 88888876666556
Q ss_pred HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 315 VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 315 i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
..+.||++.+++..+ --.--+||...++-...+.++..+.. -+.| .+.|....++|..-.+++|++
T Consensus 321 ~~e~lg~~~~pvN~~-GG~la~Ghp~gatG~~~v~e~~~qL~----~~~~---~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 321 WAQVHEPDMDKVNVN-GGAIALGHPVGSTGARLITTALHELE----RTDK---STALITMCAGGALSTGTIIER 386 (387)
T ss_pred HHHHcCCCCCCcCCC-CchhhcCCCcchhHHHHHHHHHHHHH----hcCC---CeEEEEEccccCceeEEEEEe
Confidence 678999987765542 12355899999998888888777621 1223 455555444444545677764
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.3e-13 Score=134.06 Aligned_cols=92 Identities=13% Similarity=0.062 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEW-GQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~a-gi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++ |++++|||.+++++..+ ...+..+..++..+|+++.+ +..++.+|+|+..++..|.++|
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p--~~~v~~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLP--GTTVNRYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCC--eeeeeccchhHHHHHHHHHHHH
Confidence 7899999999999997 99999999999876543 22356678899999997644 7889999999999999999999
Q ss_pred HcCCCCeEEEEEecccc
Q 016094 180 ENNPGARVLVVCCDITV 196 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s 196 (395)
++|.++.|||+++|+++
T Consensus 105 ~sG~~d~vLv~G~e~~s 121 (406)
T PRK07851 105 KAGEGDVFISAGVETVS 121 (406)
T ss_pred HCCCCCEEEEeeEEecc
Confidence 99999999999999754
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.9e-13 Score=134.85 Aligned_cols=265 Identities=16% Similarity=0.174 Sum_probs=167.2
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCCCCc-C----EEEEEecCC-C-------------------------CCC-CHHHHHH
Q 016094 99 LIEEVPKLGKEAALKAIKEWGQPVSKI-T----HLIFGAVYG-V-------------------------DMP-GADVRLM 146 (395)
Q Consensus 99 ~~~~~~~la~~Aa~~aL~~agi~~~~I-d----~li~~s~~~-~-------------------------~~p-~~a~~l~ 146 (395)
.......|+..|+++||+++|++++++ + .+++++... + ..+ ..+.+|+
T Consensus 78 ~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 157 (424)
T PRK06333 78 KMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVS 157 (424)
T ss_pred hcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHH
Confidence 334567799999999999999988776 3 566666432 1 011 2356899
Q ss_pred HHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----------cC-----CCCch--hhh
Q 016094 147 NLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----------FH-----EPTEA--RLD 208 (395)
Q Consensus 147 ~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----------~~-----~~~~~--~~~ 208 (395)
..+|++.. ...+..+|+|++.||..|..+|++|.++.+||+++|..... +. .|... .+.
T Consensus 158 ~~~gl~Gp---~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd 234 (424)
T PRK06333 158 IRYGFKGP---LGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFD 234 (424)
T ss_pred HHhCCCCC---CccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCC
Confidence 99999765 57899999999999999999999999999999999974210 00 00000 011
Q ss_pred hhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHH
Q 016094 209 MLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLAD 287 (395)
Q Consensus 209 ~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 287 (395)
....+++.||||+++||++.+... .|.....++.+.+.. .++.++.. +. + ......+++++
T Consensus 235 ~~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~--------------~d~~~~~~-~~-~--~~~~~~~a~~~ 296 (424)
T PRK06333 235 RDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTS--------------ADAYHMTA-GP-E--DGEGARRAMLI 296 (424)
T ss_pred CCCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEc--------------CCCCCCCC-CC-C--CcHHHHHHHHH
Confidence 122578899999999999865321 111122344443221 01111110 10 1 12345678999
Q ss_pred hhcccCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcc
Q 016094 288 AMSPIGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKA 361 (395)
Q Consensus 288 ~L~~~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l 361 (395)
+|+++|+++ +|| ++-.|-.+... ...+.+.++ ....+..+ .....+||+.+|+-.+.+...+.. +++|.+
T Consensus 297 Al~~Agi~p-~dId~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~-s~K~~~GH~~gAaG~~~~~~~~l~-l~~g~i 372 (424)
T PRK06333 297 ALRQAGIPP-EEVQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVS-STKSATGHLLGAAGGVEAIFTILA-LRDQIA 372 (424)
T ss_pred HHHHcCCCH-HHCCEEeccCCCCccchHHHHHHHHHHhC-CCCCceeE-CcccchhhhHHHHHHHHHHHHHHH-HhcCCc
Confidence 999999997 999 99999877654 345666777 22223221 146788998887755544433221 111221
Q ss_pred cC------------------C----CCCceEEEEEEcccceeeeeeEEe
Q 016094 362 TT------------------G----EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 362 ~~------------------G----~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.+ + ...++++.-+||.|.+..+++|+.
T Consensus 373 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~ 421 (424)
T PRK06333 373 PPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR 421 (424)
T ss_pred CCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEec
Confidence 11 0 001567888999998888888875
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.51 E-value=1e-12 Score=130.27 Aligned_cols=93 Identities=17% Similarity=0.119 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.|++++... ...+..+..++..+|++...+ +..++.+|+++..++..|.++|++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p-~~~v~~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTI-CTTVNKVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCc-eEEEeccchHHHHHHHHHHHHHHc
Confidence 789999999999999999999999999887543 223345567889999975443 677999999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 016094 182 NPGARVLVVCCDITV 196 (395)
Q Consensus 182 g~~~~vLvv~~e~~s 196 (395)
|.++.||+++.|.++
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988775
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.1e-13 Score=130.70 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
+.+|+.+|++++|+++|+++++||.+++++..+ ...+..+..++..+|++...+ ++.++.+|+|++.|+..|.++|++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p-~~~V~~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVP-GYTINKVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCcc-chhhcchhHHHHHHHHHHHHHHHc
Confidence 889999999999999999999999999998765 334466777889999985333 889999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|..+.+|+++.|++|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999998873
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.8e-13 Score=132.85 Aligned_cols=263 Identities=14% Similarity=0.099 Sum_probs=168.5
Q ss_pred hHHHHHHHHHHHHHHHcCCC-CCCcC----EEEEEecCC-C-----------------C--------CC-CHHHHHHHHc
Q 016094 102 EVPKLGKEAALKAIKEWGQP-VSKIT----HLIFGAVYG-V-----------------D--------MP-GADVRLMNLL 149 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~-~~~Id----~li~~s~~~-~-----------------~--------~p-~~a~~l~~~L 149 (395)
...+|+..|+++||+++|++ +++++ ++++++..+ . . .+ ..+.+|+..+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 36789999999999999998 66665 355544322 1 0 01 2456788899
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----------cC-----CCCchh--hhhhh
Q 016094 150 GLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----------FH-----EPTEAR--LDMLV 211 (395)
Q Consensus 150 Gl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----------~~-----~~~~~~--~~~~~ 211 (395)
|+.+. .+.+..+|+|++.||..|..+|++|.++.+|++++|..... +. +|.... +....
T Consensus 156 ~l~Gp---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 156 KLKGP---SGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred CCCCc---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 99876 57899999999999999999999999999999999873211 00 111100 11112
Q ss_pred hhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhc
Q 016094 212 GQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMS 290 (395)
Q Consensus 212 ~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 290 (395)
.++++||||+++||++.+... .|.....++.+.+.. .++.++.. +........++++++|+
T Consensus 233 ~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~--------------~d~~~~~~----p~~~~~~~~~ai~~Al~ 294 (421)
T PTZ00050 233 AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSS--------------SDAHHITA----PHPDGRGARRCMENALK 294 (421)
T ss_pred CCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEc--------------CCCCCCCC----CCCChHHHHHHHHHHHH
Confidence 578999999999999865321 111122344443221 01111100 00012345578899999
Q ss_pred c-cCCCCCCce-EEEEcCCChHHH-----HHHHHHcCCCc-ccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhccc
Q 016094 291 P-IGISDWNSL-FYIVHPGGKVIL-----DQVEQNLGLGK-EKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362 (395)
Q Consensus 291 ~-~g~~~~~di-~~i~H~~~~~~~-----~~i~~~lgi~~-ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~ 362 (395)
+ +|+++ +|| ++-+|-.+...- +.+.+.++-.. +.++.+ .+-..+||+.+|+-.+.|...+.. ++++.+.
T Consensus 295 ~~Agi~~-~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~-s~K~~~GH~~~AaG~~~l~~~~l~-l~~~~ip 371 (421)
T PTZ00050 295 DGANINI-NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVS-STKGGLGHLLGAAGAVESIVTILS-LYEQIIP 371 (421)
T ss_pred hccCCCh-hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEE-CccccccccHHHHHHHHHHHHHHH-HHcCccC
Confidence 9 99997 999 999998776443 45566666322 223322 145689999999988777655432 1113332
Q ss_pred CC-----------------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 363 TG-----------------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 363 ~G-----------------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+- ....+++..+||-|.+-++++|+.
T Consensus 372 p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 372 PTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 10 011578999999999999999874
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.3e-12 Score=127.41 Aligned_cols=249 Identities=14% Similarity=0.021 Sum_probs=162.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------------------------CCC
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V-------------------------------------DMP 139 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~-------------------------------------~~p 139 (395)
....|+..|+++||+++|++..+.+ .|++++..+ . .+|
T Consensus 72 r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 151 (398)
T PRK06519 72 TWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLS 151 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhh
Confidence 4667999999999999999643322 345555432 1 011
Q ss_pred -CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCCCC-chhh
Q 016094 140 -GADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHEPT-EARL 207 (395)
Q Consensus 140 -~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~~~-~~~~ 207 (395)
..+.+|+..+|+++. .+.+..+|+|++.||..|.++|++|.++.+|+.++|..... +.... +..+
T Consensus 152 n~~a~~is~~~gl~Gp---~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~ 228 (398)
T PRK06519 152 NLLAGNISIVHKVTGS---SRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPV 228 (398)
T ss_pred hHHHHHHHHHhCCCCc---cccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCch
Confidence 246788999999986 57899999999999999999999999999999999863210 11000 0000
Q ss_pred hhh----hhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHH
Q 016094 208 DML----VGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYID 282 (395)
Q Consensus 208 ~~~----~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~ 282 (395)
.++ ..++++|+||+++||++.+... .|.....++.+.+.... .. . ...+.
T Consensus 229 ~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~---------------------~~-~---~~~~~ 283 (398)
T PRK06519 229 WSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRA---------------------RR-A---PGDLE 283 (398)
T ss_pred hccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC---------------------CC-C---hHHHH
Confidence 111 3689999999999999866431 11222345554321100 00 0 12356
Q ss_pred HHHHHhhcccCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhh
Q 016094 283 KLLADAMSPIGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKST 356 (395)
Q Consensus 283 ~~i~~~L~~~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~ 356 (395)
++|+++|+++|+ + +|| |+..|-.+.+. .+.+.+.+++| +.. +-..+||+.+|+-.+.+...+.. +
T Consensus 284 ~am~~AL~~Agl-~-~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~p---vsS---~Ks~~GH~l~AAGa~e~i~~~la-l 354 (398)
T PRK06519 284 ASLERLLKPAGG-L-AAPTAVISGATGAHPATAEEKAALEAALAGP---VRG---IGTLFGHTMEAQFPLGLALAALS-V 354 (398)
T ss_pred HHHHHHHHHCCC-c-ccCCEEEeCCCCCCCccHHHHHHHHHHcCCC---ccc---cchhhccchHHHHHHHHHHHHHH-H
Confidence 799999999999 7 899 99999887654 44566777754 222 46689999999877777544432 1
Q ss_pred hhhcccCCCCC----------ceEEEEEEcccceeeeeeEE
Q 016094 357 EERKATTGEGL----------EYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 357 ~~g~l~~G~~~----------d~vll~~~G~G~~~~a~llr 387 (395)
++|.+.|.-+. ...|.+++|-|-.-|..+++
T Consensus 355 ~~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (398)
T PRK06519 355 SKGALFPPFDASGEKPMSGAAREAVVTTVGHWRGEGMALVE 395 (398)
T ss_pred hcCccCCCCCCCcccCccccccEEEEEeeccCCcceeEEEE
Confidence 11544432221 24677888876655666654
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.2e-13 Score=132.68 Aligned_cols=260 Identities=14% Similarity=0.115 Sum_probs=161.5
Q ss_pred hHHHHHHHHHHHHHHHcCCC---CCCcCEEEEEecC---------------C-CC--------CC-CHHHHHHHHcCCCC
Q 016094 102 EVPKLGKEAALKAIKEWGQP---VSKITHLIFGAVY---------------G-VD--------MP-GADVRLMNLLGLEP 153 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~---~~~Id~li~~s~~---------------~-~~--------~p-~~a~~l~~~LGl~~ 153 (395)
....|+..|+++||+++|++ +++|+.++.++.. + +. .+ ..+.+|+..+|+.+
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G 158 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG 158 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC
Confidence 46789999999999999986 3556555543321 1 11 11 25678889999976
Q ss_pred ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c------------CCCCch--hhhhhhhhh
Q 016094 154 SVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F------------HEPTEA--RLDMLVGQA 214 (395)
Q Consensus 154 ~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~------------~~~~~~--~~~~~~~~~ 214 (395)
. .+.+..+|+|++.||..|.++|++|.++.|||+++|..... | .+|... .+.....++
T Consensus 159 ~---~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG~ 235 (410)
T PRK07103 159 E---GFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGF 235 (410)
T ss_pred C---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCCe
Confidence 4 57799999999999999999999999999999988642110 0 011100 011122578
Q ss_pred hhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccC
Q 016094 215 IFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIG 293 (395)
Q Consensus 215 l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g 293 (395)
++||||+++||++.+... .|.+...++.+.+... ++.+.. .+. .....++++++|+++|
T Consensus 236 v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~--------------d~~~~~-~p~-----~~~~~~a~~~Al~~Ag 295 (410)
T PRK07103 236 IYGEACGAVVLESAESARRRGARPYAKLLGWSMRL--------------DANRGP-DPS-----LEGEMRVIRAALRRAG 295 (410)
T ss_pred eEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEec--------------CCCCCC-CCC-----HHHHHHHHHHHHHHcC
Confidence 999999999999865321 1111234454433211 111100 111 1234578899999999
Q ss_pred CCCCCce-EEEEcCCChHHHHHHHH-H-cCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC-------
Q 016094 294 ISDWNSL-FYIVHPGGKVILDQVEQ-N-LGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT------- 363 (395)
Q Consensus 294 ~~~~~di-~~i~H~~~~~~~~~i~~-~-lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~------- 363 (395)
+++ +|| ++..|-.+....+.++- . ++.....++.+ ..-..+||+.+|+-.+.|...+.. ++++.+.|
T Consensus 296 i~~-~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~l~-l~~~~ipp~~~~~~~ 372 (410)
T PRK07103 296 LGP-EDIDYVNPHGTGSPLGDETELAALFASGLAHAWIN-ATKSLTGHGLSAAGIVELIATLLQ-MRAGFLHPSRNLDEP 372 (410)
T ss_pred CCH-HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeEE-CCCcccccCchhhhHHHHHHHHHH-HhCCeeCCCCCCCCC
Confidence 997 999 99999987765433211 1 22211222221 134578999999888877654321 01122211
Q ss_pred ---------C----CCCceEEEEEEcccceeeeeeEE
Q 016094 364 ---------G----EGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 364 ---------G----~~~d~vll~~~G~G~~~~a~llr 387 (395)
. ....+++.-+||.|..-++++|+
T Consensus 373 ~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 373 IDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred CCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 0 01257888899999998899886
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-12 Score=129.11 Aligned_cols=333 Identities=14% Similarity=0.130 Sum_probs=194.5
Q ss_pred cCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCC
Q 016094 11 HRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAP 90 (395)
Q Consensus 11 ~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~ 90 (395)
+.+.++ |.|+|+|...|--. +.+++.+.+.. ..+ .+.+...+.....++..+.-....+. ++ +
T Consensus 8 ~~~~~~-VvItGig~~sp~g~-~~~~~w~~L~~-G~s----~i~~~~~~~~~~~~~~~~~~g~i~~~------~d----~ 70 (418)
T PRK07910 8 GKGFPN-VVVTGIAMTTALAT-DAETTWKLLLD-GQS----GIRTLDDPFVEEFDLPVRIGGHLLEE------FD----H 70 (418)
T ss_pred CCCCCC-EEEEeeEEECCCCC-CHHHHHHHHHc-CCC----eeEeCChhhhhccCCCcceEEEeccC------cc----c
Confidence 344456 99999999999844 67777776521 100 00000011111122222211110000 00 1
Q ss_pred CHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCCCcCEEEEEecCC-C-------------------------CCC-C
Q 016094 91 SLDARHAMLIEEVPKLGKEAALKAIKEWGQ---PVSKITHLIFGAVYG-V-------------------------DMP-G 140 (395)
Q Consensus 91 ~~~~~~~~~~~~~~~la~~Aa~~aL~~agi---~~~~Id~li~~s~~~-~-------------------------~~p-~ 140 (395)
.+..+..........++..|+++||+++|+ +++++. +++++..+ . ..+ .
T Consensus 71 ~~~~~~~~~~d~~~~~~l~aa~~AledAg~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 149 (418)
T PRK07910 71 QLTRVELRRMSYLQRMSTVLGRRVWENAGSPEVDTNRLM-VSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNG 149 (418)
T ss_pred cCCHHHHhhccHHHHHHHHHHHHHHHHcCCCCCCcccEE-EEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhcccc
Confidence 122222223334566899999999999996 344444 44444321 1 112 3
Q ss_pred HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c------CC-----CCc
Q 016094 141 ADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F------HE-----PTE 204 (395)
Q Consensus 141 ~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~------~~-----~~~ 204 (395)
.+.++...+|++.. ...+..+|+|++.||..|.++|++|.++.+|+.++|..... | .. |..
T Consensus 150 ~a~~is~~~~~~G~---~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~ 226 (418)
T PRK07910 150 PAAAVGLERHAKAG---VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAG 226 (418)
T ss_pred HHHHHHHHhCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCC
Confidence 45678888998875 56789999999999999999999999999999999974211 1 11 111
Q ss_pred h--hhhhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhH
Q 016094 205 A--RLDMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYI 281 (395)
Q Consensus 205 ~--~~~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~ 281 (395)
. .++....++++|||++++||++.+... .|.+...++.+.+.. .+|.++.. +.. .....
T Consensus 227 ~~rPFd~~~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~--------------~dg~~~~~-~~~---~~~~~ 288 (418)
T PRK07910 227 ACRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASIT--------------SDGFHMVA-PDP---NGERA 288 (418)
T ss_pred CcCCCcCCCCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEe--------------cCCCCCCC-CCC---CHHHH
Confidence 1 011223689999999999999865421 111223345443221 11211111 111 12234
Q ss_pred HHHHHHhhcccCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhh
Q 016094 282 DKLLADAMSPIGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKS 355 (395)
Q Consensus 282 ~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~ 355 (395)
.++++++|+++|+++ +|| ++-.|-.+.+. .+.+.+.+|-..-.+.. +-..+||+.+|+-.+.|...+..
T Consensus 289 ~~a~~~Al~~agi~~-~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v~s---~K~~~GH~~~AaG~~~li~~~l~- 363 (418)
T PRK07910 289 GHAMTRAIELAGLTP-GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVYA---PKSALGHSVGAVGAVESILTVLA- 363 (418)
T ss_pred HHHHHHHHHHhCCCH-HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCceeC---ccccccccHHHHHHHHHHHHHHH-
Confidence 578899999999997 999 99999987644 44567777732112222 46789999999877665433221
Q ss_pred hhhhcccC----------------------CCCCceEEEEEEcccceeeeeeEEe
Q 016094 356 TEERKATT----------------------GEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 356 ~~~g~l~~----------------------G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
++++.+.| + ...+++.-+||-|.+-.+++|+.
T Consensus 364 l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~-~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 364 LRDGVIPPTLNLENLDPEIDLDVVAGEPRPG-NYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred HhcCccCCCCCCCCCCCCCCcccCCCCCcCC-CccEEEEeeecCCCeeEEEEEec
Confidence 00022211 1 12467888999999998998874
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.1e-12 Score=124.29 Aligned_cols=232 Identities=18% Similarity=0.094 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-V-DMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~-~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|++++|||.+|+++... + ..+..+..+++.||+.+.+ ++.++.+|+++..+|..|.++|+
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~--~~~V~~~gasG~~al~~A~~~I~ 106 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKP--VSRVYVGGATGVMTAIAGWYHVA 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCC--eEEEecCchhHHHHHHHHHHHHh
Confidence 789999999999999999999999999876322 2 2456778899999998766 78899999999999999999999
Q ss_pred cCCCCeEEEEEecccccc---------------cC------------------------------------------CCC
Q 016094 181 NNPGARVLVVCCDITVLH---------------FH------------------------------------------EPT 203 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~---------------~~------------------------------------------~~~ 203 (395)
+|.+++||||++|+++.. |. +|.
T Consensus 107 sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP~ 186 (392)
T PRK06065 107 SGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALNNPY 186 (392)
T ss_pred CCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCch
Confidence 999999999999874210 00 010
Q ss_pred ----ch-hhh------------hhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCce
Q 016094 204 ----EA-RLD------------MLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGW 265 (395)
Q Consensus 204 ----~~-~~~------------~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~ 265 (395)
++ +.+ .+......+|||+|+||.+++... .+..+. .+.+.+....+.. +..
T Consensus 187 A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v-~I~g~~~~~~~~~-----~~~----- 255 (392)
T PRK06065 187 AQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTPV-WVEGVGWTLDNTE-----WPN----- 255 (392)
T ss_pred hhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCccc-----ccc-----
Confidence 00 000 011233558999999999765321 111122 2443332211110 000
Q ss_pred eEEeCCcchHHHHHhHHHHHHHhhcccCCCC-CCce-EEEEcCCChHHHHHHHHHcCCCccc----------------ch
Q 016094 266 DYTLSKDLPVIIGKYIDKLLADAMSPIGISD-WNSL-FYIVHPGGKVILDQVEQNLGLGKEK----------------LG 327 (395)
Q Consensus 266 ~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~-~~di-~~i~H~~~~~~~~~i~~~lgi~~ek----------------~~ 327 (395)
++.. .......+.+++++++|+++ .+|| .+=+|-....+--...+.||+.+.- ++
T Consensus 256 -----~~~~--~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~p 328 (392)
T PRK06065 256 -----RDLA--YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIP 328 (392)
T ss_pred -----cccc--ccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCee
Confidence 0000 11122357889999999983 2778 7888887665555667888865431 11
Q ss_pred HH-HHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 328 AS-RYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 328 ~~-~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
.| --=+--+||.+.++-+..+.++.++
T Consensus 329 vN~~GG~la~Ghp~gatG~~~~~e~~~Q 356 (392)
T PRK06065 329 SSPSGGLLGVGNPIAAAGLMKVISIYWQ 356 (392)
T ss_pred ecCCCccccCCCCccHHHHHHHHHHHHH
Confidence 10 0001237999988888888888776
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.9e-12 Score=128.24 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|++++|+++|+++++||.+|+++..+ ...+.++..++..+|++...+ ++.++.+|+|++.|+..|.++|++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P-~~tV~~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD-AYSVSRACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCc-ceeehhhhHHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998765 333556777999999984332 789999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|.++.||++++|++|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999998874
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.2e-13 Score=128.43 Aligned_cols=221 Identities=18% Similarity=0.221 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC-CccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLE-PSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~-~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
+.+|+..|++.+++ |++ ++||.||+++..+. ....+..++..+|++ ..+ ...++.+|++++.++..|..+|++
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p--~~tV~~~CaSG~~Ai~~a~~~I~s 98 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIP--GVTIDRQCGAGLEAIRTACHFIQG 98 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCC--ceehhhhhhHHHHHHHHHHHHHHC
Confidence 78999999999855 886 89999999987553 244555688999998 444 889999999999999999999999
Q ss_pred CCCCeEEEEEecccccc-cC---C-----CCch---------------hhhh----------------------------
Q 016094 182 NPGARVLVVCCDITVLH-FH---E-----PTEA---------------RLDM---------------------------- 209 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~-~~---~-----~~~~---------------~~~~---------------------------- 209 (395)
|..+.+|++++|.+|.. +. . +.+. ++++
T Consensus 99 G~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v 178 (361)
T PRK06690 99 GAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSF 178 (361)
T ss_pred CCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceecc
Confidence 99999999999998741 10 0 0000 0000
Q ss_pred --------hh--------h--hhhh--------------ccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCce
Q 016094 210 --------LV--------G--QAIF--------------GDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNV 256 (395)
Q Consensus 210 --------~~--------~--~~l~--------------GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~ 256 (395)
+. . ..+| +|||+|+||.+++... .+.++..++.+.+....
T Consensus 179 ~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~------- 251 (361)
T PRK06690 179 NGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGV------- 251 (361)
T ss_pred cCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEecc-------
Confidence 00 0 0122 5777777776543210 11112223333221100
Q ss_pred eeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHH---HHH
Q 016094 257 VGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGAS---RYA 332 (395)
Q Consensus 257 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~---~~~ 332 (395)
....+ ......+++++|+++|+++ +|| +|.+|+.+........+.||++++++..+ ...
T Consensus 252 -------------~~~~~---~~~~~~a~~~al~~Agl~~-~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~ 314 (361)
T PRK06690 252 -------------DPNLP---GTGPIFAVNKLLNEMNMKV-EDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIAL 314 (361)
T ss_pred -------------Ccccc---hhHHHHHHHHHHHHcCCCH-HHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhc
Confidence 00011 1234568889999999997 999 99999999999999999999998776541 011
Q ss_pred HHhcCCCCcchHHHHHHHHHh
Q 016094 333 LSEYGNLGAPSVLFILDDVRK 353 (395)
Q Consensus 333 ~~~~Gn~~sasi~~~L~~~~~ 353 (395)
.+.+|++|...++..+.++.+
T Consensus 315 Ghp~GatG~~~~~~~~~ql~~ 335 (361)
T PRK06690 315 GHPYGASGAMLVTRLFYQAKR 335 (361)
T ss_pred cCchhhhHHHHHHHHHHHHHH
Confidence 345666666666666666544
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-12 Score=129.68 Aligned_cols=93 Identities=13% Similarity=0.067 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEP-SVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~-~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|+++++||.||+++.++ ...+..+..++..+|++. .+ .+.++.+|+|++.++..|.++|+
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p--~~~v~~~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVP--AWTVQRNCASGMQALDSAAANIA 104 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCce--eeeccchhhHHHHHHHHHHHHHH
Confidence 789999999999999999999999999988765 334577788999999964 44 78999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 016094 181 NNPGARVLVVCCDITVL 197 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~ 197 (395)
+|.+++||++++|+++.
T Consensus 105 sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 105 LGRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCCEEEEEEEecccC
Confidence 99999999999997653
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.5e-12 Score=126.05 Aligned_cols=198 Identities=16% Similarity=0.137 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g 182 (395)
..+|+.+|+++||+++|++++|||.+++++.. ...|. ..+++.||+++.+ +.++..+|+++..+|..|..+|++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~~~~--~~~~~~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIRPRF--VDGTMIGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCCCee--eccccCccHHHHHHHHHHHHHHHcC
Confidence 78999999999999999999999999987643 22333 5799999998766 6788999999999999999999999
Q ss_pred CCCeEEEE-Eeccccc-----c------cC-------------------------------------------CCC----
Q 016094 183 PGARVLVV-CCDITVL-----H------FH-------------------------------------------EPT---- 203 (395)
Q Consensus 183 ~~~~vLvv-~~e~~s~-----~------~~-------------------------------------------~~~---- 203 (395)
.+++|||+ +.+..+. . |. +|.
T Consensus 103 ~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~~~ 182 (384)
T PRK06158 103 LCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAFMR 182 (384)
T ss_pred CCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhhhC
Confidence 99999998 4433210 0 00 010
Q ss_pred ch-hhh------------hhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEe
Q 016094 204 EA-RLD------------MLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTL 269 (395)
Q Consensus 204 ~~-~~~------------~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 269 (395)
.+ +.+ .+......+|||+|+||.+++... .+.++ ..+.+.+....... +. .
T Consensus 183 ~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~-----~~--~------- 247 (384)
T PRK06158 183 DPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQ-----IS--S------- 247 (384)
T ss_pred CCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcc-----cc--c-------
Confidence 00 000 112344679999999999865321 11112 23333222110000 00 0
Q ss_pred CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc
Q 016094 270 SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE 324 (395)
Q Consensus 270 ~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e 324 (395)
.+++. ......+++++++++|+++ +|| ++=+|-.....--...+.||+.+.
T Consensus 248 ~~~~~---~~~~~~aa~~A~~~AGi~p-~DId~~ElyD~Fs~~~l~~~E~lG~~~~ 299 (384)
T PRK06158 248 MPDLT---VTAAAESGPRAFAMAGLTP-ADIDVVELYDAFTINTILFLEDLGFCAK 299 (384)
T ss_pred ccchh---hhHHHHHHHHHHHHcCCCH-HHCcEEEecCCchHHHHHHHHHcCCCCC
Confidence 01111 1223468899999999997 999 888998876666677899998754
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=2e-12 Score=128.80 Aligned_cols=257 Identities=15% Similarity=0.128 Sum_probs=163.4
Q ss_pred HhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------------CCC-CHHHHHHHHc
Q 016094 101 EEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V-------------------------DMP-GADVRLMNLL 149 (395)
Q Consensus 101 ~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~-------------------------~~p-~~a~~l~~~L 149 (395)
.....|+..|+++||+++|+++++++ .+++++... . ..+ ..+.+|+..+
T Consensus 70 ~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (406)
T PRK08439 70 DRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEH 149 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHh
Confidence 34578999999999999999987776 455544321 0 112 4667899999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c------C----CCCch--hhhhhhh
Q 016094 150 GLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F------H----EPTEA--RLDMLVG 212 (395)
Q Consensus 150 Gl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~------~----~~~~~--~~~~~~~ 212 (395)
|++.. .+.+..+|+++..||..|.++|++|.++.+|++++|..... | . +|... .+.....
T Consensus 150 gl~Gp---~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~ 226 (406)
T PRK08439 150 GLKGP---NLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRD 226 (406)
T ss_pred CCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCC
Confidence 99976 46778999999999999999999999999999999963210 0 0 01110 0111225
Q ss_pred hhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcc
Q 016094 213 QAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSP 291 (395)
Q Consensus 213 ~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ 291 (395)
++++||||+++||++.+... .|.+...++.+.+.. .++.++. .+. .+...++++++|++
T Consensus 227 G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~--------------~d~~~~~-~p~-----~~~~~~a~~~al~~ 286 (406)
T PRK08439 227 GFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGES--------------GDANHIT-SPA-----PEGPLRAMKAALEM 286 (406)
T ss_pred cEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEcc--------------CCCCCCC-CCC-----HHHHHHHHHHHHHH
Confidence 78999999999999865321 111122334433211 0111111 111 13456788899999
Q ss_pred cCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHH---Hhhhhhhhccc
Q 016094 292 IGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDV---RKKSTEERKAT 362 (395)
Q Consensus 292 ~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~---~~~~~~~g~l~ 362 (395)
+++ ++| ++-.|-.+.+. ...+.+.++-.....+.+ .+-..+||+.+|+-.+.+... +++ |.+.
T Consensus 287 ag~---~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~-s~K~~~Gh~~~AsG~~~~~~~~~~l~~----~~ip 358 (406)
T PRK08439 287 AGN---PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVS-STKGQIGHCLGAAGAIEAVISIMAMRD----GILP 358 (406)
T ss_pred cCC---CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEE-CcccccccCchhhhHHHHHHHHHHHhC----CeeC
Confidence 986 467 88999877654 334566666432222221 134579999999877655433 333 3322
Q ss_pred CC---------------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 363 TG---------------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 363 ~G---------------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+- ....++|.-+||-|.+-++++|+.
T Consensus 359 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 359 PTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred CCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 10 011468889999999999999874
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-12 Score=129.38 Aligned_cols=258 Identities=14% Similarity=0.145 Sum_probs=163.7
Q ss_pred HhHHHHHHHHHHHHHHHcCCCC-CCc----CEEEEEecCC-C-------------------------CCC-CHHHHHHHH
Q 016094 101 EEVPKLGKEAALKAIKEWGQPV-SKI----THLIFGAVYG-V-------------------------DMP-GADVRLMNL 148 (395)
Q Consensus 101 ~~~~~la~~Aa~~aL~~agi~~-~~I----d~li~~s~~~-~-------------------------~~p-~~a~~l~~~ 148 (395)
.....|+..|+++||+++|+.. ..+ -+|++++..+ . .+| ..+.+|+..
T Consensus 71 ~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 150 (405)
T PRK09116 71 GRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLF 150 (405)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHH
Confidence 3466799999999999999842 212 2566665421 0 123 256789999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----c----------CCCCch--hhhhhhh
Q 016094 149 LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----F----------HEPTEA--RLDMLVG 212 (395)
Q Consensus 149 LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----~----------~~~~~~--~~~~~~~ 212 (395)
+|+++. .+.+..+|+|++.||..|.++|++|.++.+|+.++|..+.. | ..|... .+.....
T Consensus 151 ~~~~Gp---~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~ 227 (405)
T PRK09116 151 FGLKGR---VIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRD 227 (405)
T ss_pred hCCCCC---cccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCC
Confidence 999986 57899999999999999999999999999999999974320 0 001100 0111225
Q ss_pred hhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcc
Q 016094 213 QAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSP 291 (395)
Q Consensus 213 ~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ 291 (395)
++++||||+++||++.+.. ..|.+...++.+.+.. .++.+.. .+ ....+.++++++|++
T Consensus 228 G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~--------------~d~~~~~-~p-----~~~~~~~ai~~AL~~ 287 (405)
T PRK09116 228 GLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTN--------------SDGAHVT-QP-----QAETMQIAMELALKD 287 (405)
T ss_pred CEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEc--------------CCCCcCC-CC-----CHHHHHHHHHHHHHH
Confidence 8999999999999975432 1111223345443321 1111110 11 123456889999999
Q ss_pred cCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC--
Q 016094 292 IGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT-- 363 (395)
Q Consensus 292 ~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-- 363 (395)
+++++ +|| ++.+|-.+... ...+.+.+|- +++.+ .+-..+||+.+|+-.+.+...+.. ++++.+.|
T Consensus 288 Agi~p-~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~---~~pv~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ippt~ 361 (405)
T PRK09116 288 AGLAP-EDIGYVNAHGTATDRGDIAESQATAAVFGA---RMPIS-SLKSYFGHTLGACGALEAWMSIEM-MNEGWFAPTL 361 (405)
T ss_pred hCCCH-HHcCEEECcCccCCCCCHHHHHHHHHHhCC---CCeeE-CcchhhcccHHHHHHHHHHHHHHH-HHcCccCCCC
Confidence 99997 999 99999876543 4456677762 22221 146689999877665554433221 00122211
Q ss_pred -------CC-------------CCceEEEEEEcccceeeeeeEE
Q 016094 364 -------GE-------------GLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 364 -------G~-------------~~d~vll~~~G~G~~~~a~llr 387 (395)
.. ..+++|..+||-|..-++++|+
T Consensus 362 ~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 362 NLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred CCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 00 0156899999999988888875
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.4e-12 Score=128.31 Aligned_cols=250 Identities=14% Similarity=0.182 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHcCCCC--CCcCEEEEEecCC-C----------------------------CCC-CHHHHHHHHcCCCC
Q 016094 106 LGKEAALKAIKEWGQPV--SKITHLIFGAVYG-V----------------------------DMP-GADVRLMNLLGLEP 153 (395)
Q Consensus 106 la~~Aa~~aL~~agi~~--~~Id~li~~s~~~-~----------------------------~~p-~~a~~l~~~LGl~~ 153 (395)
++..|+++||+++|+++ +++ .|++++..+ . .+| ..+.+++..+|+++
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G 137 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDC-GVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG 137 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCE-EEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC
Confidence 56689999999999965 334 455555421 0 112 24678899999997
Q ss_pred ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecc-cccc----c-----C-----CCCchhhhhhhhhhhhcc
Q 016094 154 SVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDI-TVLH----F-----H-----EPTEARLDMLVGQAIFGD 218 (395)
Q Consensus 154 ~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~-~s~~----~-----~-----~~~~~~~~~~~~~~l~GD 218 (395)
. .+.+..+|+|++.||..|.++|++|.++.+||.++|. .+.. | . .|.| ....++++||
T Consensus 138 p---~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd----~~r~G~v~gE 210 (381)
T PRK05952 138 P---VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFD----RQREGLVLGE 210 (381)
T ss_pred c---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCC----CCCCCccccc
Confidence 5 5789999999999999999999999999999999996 3210 1 0 1222 2225789999
Q ss_pred ccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCC
Q 016094 219 GAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDW 297 (395)
Q Consensus 219 GAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~ 297 (395)
||+++||++.+... .+.....++.+.+... ++.+... +. .......++++++|+++|+++
T Consensus 211 Gaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~--------------d~~~~~~-~~---~~~~~~~~ai~~Al~~agi~p- 271 (381)
T PRK05952 211 GGAILVLESAELAQKRGAKIYGQILGFGLTC--------------DAYHMSA-PE---PDGKSAIAAIQQCLARSGLTP- 271 (381)
T ss_pred cEEEEEEeeHHHHHhCCCceEEEEEEEEecC--------------CCCCCCC-CC---CCHHHHHHHHHHHHHHhCCCH-
Confidence 99999999865321 1112234555443211 1111100 11 012345678899999999997
Q ss_pred Cce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCC-------
Q 016094 298 NSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTG------- 364 (395)
Q Consensus 298 ~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G------- 364 (395)
+|| ++..|-.+.+..| .+.+.++ ++++.+ .+-..+||+.+|+-.+.+..++.. ++++.+.|=
T Consensus 272 ~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~v~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ipp~~~~~~~~ 346 (381)
T PRK05952 272 EDIDYIHAHGTATRLNDQREANLIQALFP---HRVAVS-STKGATGHTLGASGALGVAFSLLA-LRHQQLPPCVGLQEPE 346 (381)
T ss_pred HHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCeee-cchhhhccChHHHHHHHHHHHHHH-HhcCccCCCCCCCCCC
Confidence 999 9999988766544 3455565 223321 246789999999987777654432 111333320
Q ss_pred -----------CCCceEEEEEEcccceeeeeeEE
Q 016094 365 -----------EGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 365 -----------~~~d~vll~~~G~G~~~~a~llr 387 (395)
...++++..+||-|..-++++|+
T Consensus 347 ~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 347 FDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred CCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 01257899999999999898886
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.2e-12 Score=125.28 Aligned_cols=262 Identities=15% Similarity=0.108 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g 182 (395)
..+|+.+|+++||+++|+++++||.+++++..+.... ...++..+|+.+.+ ++.++.+|+|+..+|..|.++|++|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~~~~--~~~v~~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMTGIP--IVNVNNNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCCCCC--CcccccccHHHHHHHHHHHHHHHCC
Confidence 7899999999999999999999999988876542111 23567789997644 6789999999999999999999999
Q ss_pred CCCeEEEEEecccccc-c---------------------CCCC-c---h-------------------------------
Q 016094 183 PGARVLVVCCDITVLH-F---------------------HEPT-E---A------------------------------- 205 (395)
Q Consensus 183 ~~~~vLvv~~e~~s~~-~---------------------~~~~-~---~------------------------------- 205 (395)
.+++||++++|.++.. + ..+. . .
T Consensus 98 ~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~ 177 (391)
T PRK08256 98 AADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARRH 177 (391)
T ss_pred CCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 9999999998876420 0 0000 0 0
Q ss_pred -------------hhhh------------hhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeee
Q 016094 206 -------------RLDM------------LVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGH 259 (395)
Q Consensus 206 -------------~~~~------------~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~ 259 (395)
+.++ .......+|||+|+||.+++... .+..+...+.+.+.... ....+ .
T Consensus 178 A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~--~~~~~--~ 253 (391)
T PRK08256 178 AANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTD--TPSTF--D 253 (391)
T ss_pred hhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEecc--ccccc--c
Confidence 0000 01122347999999998765321 10012334443221110 00000 0
Q ss_pred EecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc--------------
Q 016094 260 LKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE-------------- 324 (395)
Q Consensus 260 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e-------------- 324 (395)
. .+. .... .......+++++++++|+++ +|| .+-+|.......-...+.||+.++
T Consensus 254 ~-~~~------~~~~--~~~~~~~a~~~a~~~ag~~~-~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~ 323 (391)
T PRK08256 254 G-RSM------IDLV--GYDMTRAAAQQVYEQAGIGP-EDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTY 323 (391)
T ss_pred c-ccc------cccc--ccHHHHHHHHHHHHHcCCCH-HHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 0 000 0000 01123367889999999997 999 999999988888888899999876
Q ss_pred ----cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhh-h--cccCCCCCceEEEEEEcccceeeeeeE
Q 016094 325 ----KLGASRYALSEYGNLGAPSVLFILDDVRKKSTEE-R--KATTGEGLEYGVLFGFGPGITVETVVL 386 (395)
Q Consensus 325 ----k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~-g--~l~~G~~~d~vll~~~G~G~~~~a~ll 386 (395)
.+..+ ==.--+||...|+=+..+.++..+...+ | +++.. ...+..+.|.|.+....++
T Consensus 324 ~G~~pvN~~-GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Qv~~~---~~~l~~~~G~~~~~~~~v~ 388 (391)
T PRK08256 324 GGRWVVNPS-GGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGA---RLALQHNLGLGGACVVTLY 388 (391)
T ss_pred CCCeeeCCC-CccccCCCCccHHHHHHHHHHHHHhcCCcCCCcCCcc---ceEEEeccccceeEEEEEE
Confidence 33221 0012379999888888888877752211 1 23223 6777888886555433333
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.8e-12 Score=126.97 Aligned_cols=94 Identities=15% Similarity=0.098 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKE-WGQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~-agi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
+.+|+.+|++++|++ +|+++++||.+|+++..+ ...+..+..++..+|++...+ ++.++++|+|++.|+.+|.++|
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp-~~tV~~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVP-GSTINRLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc-eEEEeccchhHHHHHHHHHHHH
Confidence 789999999999996 599999999999998875 223788899999999997454 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
++|..+.+|++++|++|.
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999874
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.2e-12 Score=125.87 Aligned_cols=228 Identities=16% Similarity=0.139 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VD--MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~--~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++|+++++||.|++++..+ .. .+..+..+...+|+...+ .++++++|+|+..||..|.++|
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p--~~~v~~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKP--ATRVENACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCc--eeeeccccHHHHHHHHHHHHHH
Confidence 789999999999999999999999999987643 21 112223344566776655 7899999999999999999999
Q ss_pred HcCCCCeEEEEEecccccc-------------c--------C-------------------------------------C
Q 016094 180 ENNPGARVLVVCCDITVLH-------------F--------H-------------------------------------E 201 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~~-------------~--------~-------------------------------------~ 201 (395)
++|.+++|||+++|+++.. + . +
T Consensus 100 ~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~n 179 (389)
T PRK07516 100 EAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVAN 179 (389)
T ss_pred HCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcC
Confidence 9999999999999985420 0 0 0
Q ss_pred CC----ch-hhhh----------------hhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeee
Q 016094 202 PT----EA-RLDM----------------LVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGH 259 (395)
Q Consensus 202 ~~----~~-~~~~----------------~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~ 259 (395)
|. .. +.++ ......++|||+|+||++++... . . ....+.+.+...... .
T Consensus 180 P~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~-~-~~v~i~g~~~~~~~~-----~-- 250 (389)
T PRK07516 180 PYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARAL-Q-RAVRFRARAHVNDFL-----P-- 250 (389)
T ss_pred ChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhc-C-CCEEEEEEEeccCcc-----c--
Confidence 10 00 0000 01122457999999998765321 1 1 122343332211000 0
Q ss_pred EecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc--------------
Q 016094 260 LKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE-------------- 324 (395)
Q Consensus 260 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e-------------- 324 (395)
+. ..+... ......+++++|+++|+++ +|| .+-+|-.....--...+.||+.++
T Consensus 251 -------~~-~~~~~~--~~~~~~a~~~a~~~agl~~-~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~ 319 (389)
T PRK07516 251 -------LS-RRDPLA--FEGPRRAWQRALAQAGVTL-DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAK 319 (389)
T ss_pred -------cc-CCCccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 00 011101 1233468889999999997 999 889999877777778899998864
Q ss_pred --cchHHHHH---HHhcCCCCcchHHHHHHHHHhh
Q 016094 325 --KLGASRYA---LSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 325 --k~~~~~~~---~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
+++.| . +.-+||...|+-...+.++..+
T Consensus 320 ~g~~pvN--~sGG~la~Ghp~gasG~~~~~e~~~Q 352 (389)
T PRK07516 320 DGKLPVN--PSGGLKAKGHPIGATGVSMHVLAAMQ 352 (389)
T ss_pred CCCeeec--CCCCcccCCCCccHHHHHHHHHHHHH
Confidence 22222 1 3358999999988888888775
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.6e-12 Score=127.67 Aligned_cols=256 Identities=12% Similarity=0.087 Sum_probs=165.5
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-----------------CC--------C-CHHHHHHHH
Q 016094 100 IEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V-----------------DM--------P-GADVRLMNL 148 (395)
Q Consensus 100 ~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~-----------------~~--------p-~~a~~l~~~ 148 (395)
......|+..|+.+||+++|+++++++ .|++++..+ + .. + ..+.+|+..
T Consensus 68 ~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 147 (399)
T cd00832 68 TDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIR 147 (399)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHH
Confidence 344667999999999999999876553 566665432 1 00 1 245789999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----------cC---CCCch--hhhhhhh
Q 016094 149 LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----------FH---EPTEA--RLDMLVG 212 (395)
Q Consensus 149 LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----------~~---~~~~~--~~~~~~~ 212 (395)
+|++.. ...+..+|++++.||..|.++|++|. +.+|+.++|..... +. +|... .++....
T Consensus 148 ~gl~Gp---~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~ 223 (399)
T cd00832 148 HGMRGP---SGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA 223 (399)
T ss_pred hCCCCC---cccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC
Confidence 999976 57899999999999999999999999 99999999874311 10 01100 0111236
Q ss_pred hhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcc
Q 016094 213 QAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSP 291 (395)
Q Consensus 213 ~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ 291 (395)
++++|+||+++||++.+... .|.+...++.+.+... ++.+. .. ....+.++|+++|++
T Consensus 224 G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~--------------d~~~~--~~-----~~~~~~~a~~~al~~ 282 (399)
T cd00832 224 GYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATF--------------DPPPG--SG-----RPPGLARAIRLALAD 282 (399)
T ss_pred CEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcC--------------CCCCC--CC-----CHHHHHHHHHHHHHH
Confidence 79999999999999865431 1122233454433211 11000 00 134566889999999
Q ss_pred cCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC--
Q 016094 292 IGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT-- 363 (395)
Q Consensus 292 ~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-- 363 (395)
+|+++ ++| ++..|..+... .+.+.+.+|-. +++.+ .+-..+||+.+|+-.+.|...+.. ++++.+.+
T Consensus 283 ag~~~-~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~--~~pv~-s~K~~~Gh~~~aaG~~~l~~~~l~-l~~~~ipp~~ 357 (399)
T cd00832 283 AGLTP-EDVDVVFADAAGVPELDRAEAAALAAVFGPR--GVPVT-APKTMTGRLYAGGAPLDVATALLA-LRDGVIPPTV 357 (399)
T ss_pred cCCCH-HHccEEEeccCcCCCCCHHHHHHHHHHhCCC--CCcee-CCCchhcchHHHHHHHHHHHHHHH-HhCCCcCCCC
Confidence 99997 999 99999877544 34566667632 22221 135678999999888887654321 00022211
Q ss_pred --------------------CCCCceEEEEEEcccceeeeeeE
Q 016094 364 --------------------GEGLEYGVLFGFGPGITVETVVL 386 (395)
Q Consensus 364 --------------------G~~~d~vll~~~G~G~~~~a~ll 386 (395)
. ..++++.-+||-|..-++++|
T Consensus 358 n~~~~~p~~~l~~v~~~~~~~-~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 358 NVTDVPPAYGLDLVTGRPRPA-ALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCCCCCCCCcccCCCcccCC-CCCEEEEeccCCCCcceEEEC
Confidence 1 025788888998887776654
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.1e-12 Score=125.56 Aligned_cols=257 Identities=15% Similarity=0.133 Sum_probs=163.0
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C--------------------------CCC-CHHHHHH
Q 016094 99 LIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V--------------------------DMP-GADVRLM 146 (395)
Q Consensus 99 ~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~--------------------------~~p-~~a~~l~ 146 (395)
+......++..|+++||+++|+++++.+ .|++++..+ . ..+ ..+.+|+
T Consensus 67 ~~~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is 146 (406)
T PRK07967 67 FMGDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLA 146 (406)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHH
Confidence 3344667899999999999999764432 455555311 0 111 3567899
Q ss_pred HHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----c-----C------CCCch--hhhh
Q 016094 147 NLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----F-----H------EPTEA--RLDM 209 (395)
Q Consensus 147 ~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----~-----~------~~~~~--~~~~ 209 (395)
..+|+++. .+.+..+|++++.||..|.++|++|.++.+|+.++|..+.. | . .|... .++.
T Consensus 147 ~~~~l~Gp---~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~ 223 (406)
T PRK07967 147 TPFKIKGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDA 223 (406)
T ss_pred HHHCCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcC
Confidence 99999986 57899999999999999999999999999999999864321 1 0 01100 0111
Q ss_pred hhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHh
Q 016094 210 LVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADA 288 (395)
Q Consensus 210 ~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 288 (395)
...++++||||+++||++.+.. ..|.+...++.+.+.. .++.++. .+ ....+.++++++
T Consensus 224 ~r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~--------------~d~~~~~-~p-----~~~~~~~a~~~A 283 (406)
T PRK07967 224 NRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGAT--------------SDGYDMV-AP-----SGEGAVRCMQMA 283 (406)
T ss_pred CCCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEC--------------CCCCCCC-CC-----CHHHHHHHHHHH
Confidence 2257899999999999986532 1112223455544321 1121111 11 133456788889
Q ss_pred hcccCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHH---Hhhhhhhh
Q 016094 289 MSPIGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDV---RKKSTEER 359 (395)
Q Consensus 289 L~~~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~---~~~~~~~g 359 (395)
|+..+ .+| ++..|-.+.+. ...+.+.+|-. ..+.+ .+-..+||+.+|+-.+.|... +++ +
T Consensus 284 l~~~~----~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~--~~~v~-s~K~~~GH~~~AaG~~e~i~~~lal~~----~ 352 (406)
T PRK07967 284 LATVD----TPIDYINTHGTSTPVGDVKELGAIREVFGDK--SPAIS-ATKSLTGHSLGAAGVQEAIYSLLMMEH----G 352 (406)
T ss_pred HhCCC----CCccEEEcCCCCCCCCCHHHHHHHHHHhCCC--CCeeE-CcccccccCccccchHHHHHHHHHHhc----C
Confidence 98643 378 99999977654 34566677632 21221 145689999988877665332 222 2
Q ss_pred cccC---------CC-------------CCceEEEEEEcccceeeeeeEEec
Q 016094 360 KATT---------GE-------------GLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 360 ~l~~---------G~-------------~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
.+.| .. ..++++..+||-|..-++++|+..
T Consensus 353 ~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 353 FIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred cCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 2221 00 015688999999999999999764
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3e-12 Score=124.09 Aligned_cols=257 Identities=16% Similarity=0.163 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHHcCC--CCCCcCEEEEEecCC-C-------------------------CCC-CHHHHHHHHcCCCC
Q 016094 103 VPKLGKEAALKAIKEWGQ--PVSKITHLIFGAVYG-V-------------------------DMP-GADVRLMNLLGLEP 153 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi--~~~~Id~li~~s~~~-~-------------------------~~p-~~a~~l~~~LGl~~ 153 (395)
...++..|+++||+++|+ +++++. |++++..+ . ..+ ..+.+++..+|+++
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTA-TIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEE-EEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 567889999999999996 455654 44444321 1 011 35678999999998
Q ss_pred ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c-----C------CCCch--hhhhhhhhhh
Q 016094 154 SVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F-----H------EPTEA--RLDMLVGQAI 215 (395)
Q Consensus 154 ~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~-----~------~~~~~--~~~~~~~~~l 215 (395)
. .+.+..+|+|++.||..|.++|+.|.++.+|+.++|..... | . .|... .++....+++
T Consensus 83 p---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v 159 (342)
T PRK14691 83 P---IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDGFV 159 (342)
T ss_pred C---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCCcc
Confidence 6 57899999999999999999999999999999999874221 0 0 01111 0112236899
Q ss_pred hccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCC
Q 016094 216 FGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGI 294 (395)
Q Consensus 216 ~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~ 294 (395)
+||||+++||++.+.. ..|..+..++.+.+... ++.++.. +. .......++++++|+++|+
T Consensus 160 ~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~--------------d~~~~~~-p~---p~~~~~~~ai~~AL~~Agl 221 (342)
T PRK14691 160 MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSA--------------DAYHMTS-GA---EDGDGAYRAMKIALRQAGI 221 (342)
T ss_pred ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEc--------------CCCCCCC-CC---CCHHHHHHHHHHHHHHcCC
Confidence 9999999999976532 11122445665543221 0100000 00 0123445788999999999
Q ss_pred CCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHH---HhhhhhhhcccC--
Q 016094 295 SDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDV---RKKSTEERKATT-- 363 (395)
Q Consensus 295 ~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~---~~~~~~~g~l~~-- 363 (395)
++ +|| ++-.|-.+.+. ...+.+.+|-. ..++.+ .+-..+||+.+|+-.+.+... +++ +.+.|
T Consensus 222 ~p-~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~l~~----~~ippt~ 294 (342)
T PRK14691 222 TP-EQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAIT-STKSATGHLLGAAGGLETIFTVLALRD----QIVPATL 294 (342)
T ss_pred CH-HHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEE-CCcccccCCcchhhHHHHHHHHHHHhC----CccCCcC
Confidence 97 999 99999977655 33556677632 222222 145689998766644333322 222 22211
Q ss_pred ----------------C----CCCceEEEEEEcccceeeeeeEEe
Q 016094 364 ----------------G----EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 364 ----------------G----~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+ ....++|.-+||-|..-++++|+.
T Consensus 295 n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 295 NLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred CCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 0 012568899999999999999875
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.8e-12 Score=127.07 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHH-HHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADV-RLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~-~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
+.+|+.+|+++||++++++|++||.||+++.++ +..+..+. .+++.+|+.+.+ +++++.+|+|++.++..|..+|+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p--~~~V~~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAP--AIGMNNLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCc--EEEecchhHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999998877 43455555 377888987766 89999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 016094 181 NNPGARVLVVCCDITVL 197 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~ 197 (395)
+|.++.+||+++|+++.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999998763
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.7e-12 Score=128.43 Aligned_cols=94 Identities=15% Similarity=0.053 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKE-WGQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~-agi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
+.+|+.+|++++|++ +|+++++||.|++++... ...+..+..++..+|++...+ ++.++++|+|++.|+..|...|
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p-~~~V~~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVP-GTTVNRLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc-eEEeechhhhHHHHHHHHHHHH
Confidence 789999999999995 799999999999998764 323677888999999985343 8899999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
.+|..+.+|++++|++|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999874
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.1e-12 Score=124.47 Aligned_cols=93 Identities=16% Similarity=0.075 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|++++|||.+|+++..+ ...+..+..++..+|++...+ .+.++.+|+|++.++..|.++|++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~v~~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVT-KYTVNVVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCc-ceeeechhhHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999987654 223345678999999985322 778899999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 016094 182 NPGARVLVVCCDITV 196 (395)
Q Consensus 182 g~~~~vLvv~~e~~s 196 (395)
|.++.||+++.|+++
T Consensus 105 G~~d~vla~G~e~ms 119 (388)
T PRK06366 105 GERDLVIAGGMENMS 119 (388)
T ss_pred CCCCEEEEEeeEccc
Confidence 999999998888865
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.5e-12 Score=125.54 Aligned_cols=235 Identities=17% Similarity=0.099 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCC-----CCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDM-----PGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~-----p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++|+++++||.+|++++++ +.. +.....+ .+++.+.+ ++.++.+|+++..+|..|.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~--~~~~~g~~--~~~v~~~Casg~~al~~Aa 101 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATV--HPALWGVP--ASRHEAACASGSVATLAAM 101 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHH--hhcCCCCc--eeecccccHHHHHHHHHHH
Confidence 889999999999999999999999999988755 211 2222222 22443333 6899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccc-------------------cCCC-Cchh------------------------------
Q 016094 177 DIAENNPGARVLVVCCDITVLH-------------------FHEP-TEAR------------------------------ 206 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~-------------------~~~~-~~~~------------------------------ 206 (395)
.+|++|.+++|||+++|+++.. +..+ ....
T Consensus 102 ~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la~va~~~~~~ 181 (403)
T PRK06289 102 ADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLRAIAEINFAN 181 (403)
T ss_pred HHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 9999999999999999986421 0000 0000
Q ss_pred ---------h----------hhh------------hhhhhhccccEEEEEecCCCC-CCCC-CCceEEEeecceecCCCC
Q 016094 207 ---------L----------DML------------VGQAIFGDGAAAAIIGADPDV-SLNE-RPLFQVLSCSQMTVPNTE 253 (395)
Q Consensus 207 ---------~----------~~~------------~~~~l~GDGAaA~vL~~~~~~-~~~~-~~~~~l~~~~~~~~p~~~ 253 (395)
. ++. ......+|||+|+||.+++.. ..+. .+...+.+.+....+..
T Consensus 182 A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~- 260 (403)
T PRK06289 182 ARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLG- 260 (403)
T ss_pred HccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccc-
Confidence 0 000 011123689999988875432 1111 12245554432211100
Q ss_pred CceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc--------
Q 016094 254 NNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE-------- 324 (395)
Q Consensus 254 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e-------- 324 (395)
+....+ .. ..+... ......+.+++++++|+++ +|| .+-+|-.....--...+.||+.+.
T Consensus 261 ----~~~~~~---~~-~~~~~~--~~~~~~aa~~a~~~Agi~~-~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~ 329 (403)
T PRK06289 261 ----LEQKLD---RS-AGDPYV--LPHVRQAVLDAYRRAGVGL-DDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIE 329 (403)
T ss_pred ----cccccc---cc-cccccc--cHHHHHHHHHHHHHcCCCH-HHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHh
Confidence 000000 00 000011 1123468889999999997 999 888998877777778899998752
Q ss_pred ----------cchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 325 ----------KLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 325 ----------k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
++..+ ==.--+||...++-+..+.+++.+
T Consensus 330 ~G~~~~~G~lpvN~~-GG~la~Ghp~gatG~~~~~e~~~Q 368 (403)
T PRK06289 330 NGEIAIGGRLPINPS-GGLIGGGHPVGASGVRMLLDAAKQ 368 (403)
T ss_pred cCCcccCCCeeEcCC-CCccccCCCccchHHHHHHHHHHH
Confidence 22221 001347999988888888888776
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.7e-12 Score=126.21 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKE-WGQPVSKITHLIFGAVYG-V-DMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~-agi~~~~Id~li~~s~~~-~-~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
+.+|+.+|++++|++ +|+++++||.|++++..+ . ..+..+..++..+|++...+ ++.++++|+|+..|+..|.++|
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP-~~tV~~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVP-GTTINRLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCc-eEEEecccccHHHHHHHHHHHH
Confidence 789999999999995 799999999999998765 2 23667788999999976444 8899999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
++|..+.+|++++|++|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999874
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.5e-12 Score=122.84 Aligned_cols=94 Identities=13% Similarity=0.064 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-V-DMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~-~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
+.+|+.+|++++|+++|+++++||.+|+++..+ . ..+..+....-..|++...+ .+.++.+|+|++.|+..|.++|+
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP-~~tV~~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVP-GTSIDRQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc-eEEEechhhHHHHHHHHHHHHHH
Confidence 789999999999999999999999999998764 2 22455555555557754443 88999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 016094 181 NNPGARVLVVCCDITVL 197 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~ 197 (395)
+|.++.+|+++.|++|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999999874
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-12 Score=129.24 Aligned_cols=264 Identities=15% Similarity=0.079 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHHHcCCCC-----CCcCEEEEEecCC-C-------------------------CCC-CHHHHHHHHcC
Q 016094 103 VPKLGKEAALKAIKEWGQPV-----SKITHLIFGAVYG-V-------------------------DMP-GADVRLMNLLG 150 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~-----~~Id~li~~s~~~-~-------------------------~~p-~~a~~l~~~LG 150 (395)
...|+..|+.+||+++|+++ .+..+|+++++.+ . ..+ ..+.+|+..+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 56799999999999999854 2456788876432 1 011 24568999999
Q ss_pred CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c------C-----CCCch--hhhhhhh
Q 016094 151 LEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F------H-----EPTEA--RLDMLVG 212 (395)
Q Consensus 151 l~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~------~-----~~~~~--~~~~~~~ 212 (395)
+.+. .+.+..+|+++..||..|..+|++|.++.+||.++|..... | . +|... .+.....
T Consensus 173 l~Gp---~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~~ 249 (437)
T PLN02836 173 FQGP---NHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRD 249 (437)
T ss_pred CCCc---eeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCCC
Confidence 9875 67899999999999999999999999999999998863210 0 0 01100 0111225
Q ss_pred hhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcc
Q 016094 213 QAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSP 291 (395)
Q Consensus 213 ~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ 291 (395)
++++||||+++||++.+... .|.+...++.+.+.. + ++.+.. .+ ........++++++|++
T Consensus 250 G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~----~----------d~~~~~-~p---~~~~~~~~~a~~~Al~~ 311 (437)
T PLN02836 250 GFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMS----G----------DAHHIT-QP---HEDGRGAVLAMTRALQQ 311 (437)
T ss_pred CeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeec----C----------CCCCCc-CC---CcchHHHHHHHHHHHHH
Confidence 78999999999999865321 111123345443321 0 111111 01 11123345788999999
Q ss_pred cCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCc--ccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC
Q 016094 292 IGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGK--EKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT 363 (395)
Q Consensus 292 ~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~--ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~ 363 (395)
+|+++ +|| ++-.|-.+...-+ .+.+.++-.. ..++.+ .+-..+||+.+|+-.+.|...+.. ++++.+.+
T Consensus 312 Agi~~-~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~l~-l~~~~ipp 388 (437)
T PLN02836 312 SGLHP-NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFS-STKGATGHLLGAAGAVEAIFSVLA-IHHGIAPP 388 (437)
T ss_pred cCCCH-hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeE-CCcccccccHHHHHHHHHHHHHHH-HhcCccCC
Confidence 99997 999 9999987764433 3455554211 112211 135578999888776654433221 11132221
Q ss_pred ----------------------CCCCceEEEEEEcccceeeeeeEEecc
Q 016094 364 ----------------------GEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 364 ----------------------G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
......+|.-+||-|..-++++|+..+
T Consensus 389 ~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 389 TLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred CCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecCC
Confidence 001145677789999999999998653
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.7e-12 Score=124.35 Aligned_cols=94 Identities=18% Similarity=0.154 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
+.+|+.+|++++|+++|+++++||.+++++..+ ...+..+..++..+|++...+ ++.++.+|+|++.|+..|.+.|+
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p-~~tV~~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVP-GQTVNRLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCc-eeeeechhhhHHHHHHHHHHHHH
Confidence 789999999999999999999999999998754 223566777889999985443 88999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 016094 181 NNPGARVLVVCCDITVL 197 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~ 197 (395)
+|.++.+|+++.|++|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999874
|
|
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.8e-13 Score=102.09 Aligned_cols=66 Identities=26% Similarity=0.238 Sum_probs=55.2
Q ss_pred eeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCC
Q 016094 159 MIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPD 230 (395)
Q Consensus 159 ~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~ 230 (395)
|+++++|++++.||++|..+|++|..++||||++|+.+. +.++. ++...++|||||+|+||+++++
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~-----~~~~~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRT-----DRQTAFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTT-----HHHHHTTB-EEEEEEEEEEESS
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-ccccc-----ccCcceeecchheEEEEEecCC
Confidence 689999999999999999999999999999999999997 55443 3456789999999999999854
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-11 Score=121.61 Aligned_cols=213 Identities=15% Similarity=0.117 Sum_probs=141.7
Q ss_pred CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc--------------cCCCCch
Q 016094 140 GADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH--------------FHEPTEA 205 (395)
Q Consensus 140 ~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~--------------~~~~~~~ 205 (395)
..+.+|+..||++.. .+.+..+|++++.||..|.++|++|.++.|||+++|..+.. ...|.+
T Consensus 138 ~~a~~ia~~lgl~Gp---~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd- 213 (392)
T PRK09185 138 SLADFLRAYLGLSGP---AYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS- 213 (392)
T ss_pred HHHHHHHHHhCCCCC---cccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc-
Confidence 567889999999864 67889999999999999999999999999999999964321 011222
Q ss_pred hhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHH
Q 016094 206 RLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLL 285 (395)
Q Consensus 206 ~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 285 (395)
....++++||||+++||++.... ...+.+.+... ++.+.. .+. + ......+++
T Consensus 214 ---~~~~G~~~gEGaa~vVLe~~~~~------~~~I~g~g~~~--------------d~~~~~-~~~-~--~~~~~~~a~ 266 (392)
T PRK09185 214 ---ANRDGINIGEAAAFFLLEREDDA------AVALLGVGESS--------------DAHHMS-APH-P--EGLGAILAM 266 (392)
T ss_pred ---CCCCccceeceEEEEEEEEcCCC------cEEEEEEEEeC--------------CCCCCC-CCC-C--CHHHHHHHH
Confidence 11247899999999999997322 23455433211 111100 011 1 122345788
Q ss_pred HHhhcccCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhh
Q 016094 286 ADAMSPIGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEER 359 (395)
Q Consensus 286 ~~~L~~~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g 359 (395)
+++|+++|+++ +|| ++.+|-.+... +..+.+.++-.. .+. + +-..+||+.+|+-.+.|...+.. +++|
T Consensus 267 ~~Al~~Agl~~-~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv~-s--~K~~~Gh~~~AaG~~~l~~~~~~-l~~~ 340 (392)
T PRK09185 267 QQALADAGLAP-ADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PCS-S--TKGLTGHTLGAAGAVEAAICWLA-LRHG 340 (392)
T ss_pred HHHHHHcCCCH-HHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-cee-C--CCcccccChhhcchHHHHHHHHH-HhcC
Confidence 99999999997 999 99999987653 334556665321 122 2 35678999999877777654432 0113
Q ss_pred cccCC---------C------------CCceEEEEEEcccceeeeeeEEec
Q 016094 360 KATTG---------E------------GLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 360 ~l~~G---------~------------~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
.+.+- . ..++++.-+||-|..-.+++|+..
T Consensus 341 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 341 LPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence 22210 0 015789999999999999999854
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.9e-11 Score=122.15 Aligned_cols=94 Identities=13% Similarity=0.112 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|++++|+++|+++++||.+|+++..+ ...+.++..++-..|++...+ ++.++++|+|++.|+.+|.++|++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p-~~~V~~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD-AYSVTRACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCc-hhhhhhhhhHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998765 223456667777789984333 889999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|.++.||++++|++|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999873
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-11 Score=121.40 Aligned_cols=253 Identities=14% Similarity=0.097 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|+++++||.|++++... ...+..+....-.+|++...+ .+.++.+|+++..++..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p-~~~v~~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVP-GVTVDRQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCc-eeeecchhhhHHHHHHHHHHHHH
Confidence 789999999999999999999999999876522 112334444444577754332 67889999999999999999999
Q ss_pred cCCCCeEEEEEeccccc-cc----------------C------CCCc--h----------------hhh-----------
Q 016094 181 NNPGARVLVVCCDITVL-HF----------------H------EPTE--A----------------RLD----------- 208 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~-~~----------------~------~~~~--~----------------~~~----------- 208 (395)
+|.++.||+++.|.++. .+ . ++.. . +++
T Consensus 105 sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~~~~ 184 (382)
T PRK07801 105 SGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESHR 184 (382)
T ss_pred CCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999986542 10 0 0000 0 000
Q ss_pred ----h------------------------------hhhhhhh-------------ccccEEEEEecCCCCC-CCCCCceE
Q 016094 209 ----M------------------------------LVGQAIF-------------GDGAAAAIIGADPDVS-LNERPLFQ 240 (395)
Q Consensus 209 ----~------------------------------~~~~~l~-------------GDGAaA~vL~~~~~~~-~~~~~~~~ 240 (395)
+ .....++ +|||+|+||++++... .+..+...
T Consensus 185 ~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~ 264 (382)
T PRK07801 185 RAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRAR 264 (382)
T ss_pred HHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEE
Confidence 0 0000111 3566665555443210 00001122
Q ss_pred EEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHc
Q 016094 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNL 319 (395)
Q Consensus 241 l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~l 319 (395)
+.+... ..... .........+++++++++|+++ +|| ++=+|-......-...+.|
T Consensus 265 i~~~~~---------------------~~~~~--~~~~~~~~~a~~~a~~~agi~~-~did~~e~~d~Fa~~~~~~~e~l 320 (382)
T PRK07801 265 IHHLSV---------------------RGDDP--VFMLTAPIPATRYALEKTGLSI-DDIDVVEINEAFAPVVLAWLKET 320 (382)
T ss_pred EEEEEE---------------------ecCCh--HhhccChHHHHHHHHHHcCCCH-HHcCEeeecccchHHHHHHHHHh
Confidence 221100 00000 0011122357889999999997 999 8888887777777788999
Q ss_pred CCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 320 GLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 320 gi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
|+.++++..+ --.--+||...|+-...+.++..+.. + .| ..+.+....|.|.+..+++|+.
T Consensus 321 G~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~--~---~~--~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 321 GADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELE--R---TG--GRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred CCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHH--h---cC--CCEEEEEEcccccceeEEEEEe
Confidence 9998876553 12455899999999888888887622 1 22 1455555566666666666653
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.5e-11 Score=118.93 Aligned_cols=94 Identities=14% Similarity=0.095 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKE-WGQPVSKITHLIFGAVYG-VD-MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~-agi~~~~Id~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+..+++++|++ +|+++++||.+++++..+ .. .+..+..++..+|++...+ ++.++++|+|++.|+..|.++|
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p-~~~V~~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVP-AVTVNRLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCc-ceeeechhHHHHHHHHHHHHHH
Confidence 789999999999996 799999999999998764 32 3556777889999985333 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
++|.++.||+++.|++|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999998763
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.8e-11 Score=117.79 Aligned_cols=94 Identities=10% Similarity=0.017 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKE-WGQPVSKITHLIFGAVYG-VD-MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~-agi~~~~Id~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
+.+|+.+|++.+|++ +|+++++||.+++++... .. .+..+..+....|++...+ ++.++.+|+|++.|+..|.+.|
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p-~~tV~~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSA-AVTVNRLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcc-hhhhhhhhHHHHHHHHHHHHHH
Confidence 789999999999996 599999999999998754 22 3456666676889887554 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999998863
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-10 Score=115.86 Aligned_cols=247 Identities=17% Similarity=0.104 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHH-HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGAD-VRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a-~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|++++|||.+++++... ...+..+ ..++..||+++.+ +..++.+|+|+..++..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~--~~~v~~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKP--SKRIEGGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCc--eEEEeCCcHHHHHHHHHHHHHHH
Confidence 679999999999999999999999988766443 2222333 3468999998865 78899999999999999999999
Q ss_pred cCCCCeEEEEEecccccc----------------cCC------------------------------------------C
Q 016094 181 NNPGARVLVVCCDITVLH----------------FHE------------------------------------------P 202 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~----------------~~~------------------------------------------~ 202 (395)
+|.++.||++++|+.+.. +.. |
T Consensus 115 sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~NP 194 (430)
T PRK06365 115 SGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIHNP 194 (430)
T ss_pred cCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCc
Confidence 999999999999975420 000 0
Q ss_pred Cch-----hhhhh------------hhhhhhccccEEEEEecCCCCC-CCCCCce-EEEeeccee-cCCCCCceeeeE--
Q 016094 203 TEA-----RLDML------------VGQAIFGDGAAAAIIGADPDVS-LNERPLF-QVLSCSQMT-VPNTENNVVGHL-- 260 (395)
Q Consensus 203 ~~~-----~~~~~------------~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~-~l~~~~~~~-~p~~~~~~~~~~-- 260 (395)
... +.++. .....++|||+|+||.+++... .+.++.+ ...+..... .+.......|..
T Consensus 195 ~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv~i~g~g~~~~~~~~~~~~~~~~~~~~ 274 (430)
T PRK06365 195 FAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKPVLIKAIGTGSDTLRLADRPFGEVPLLP 274 (430)
T ss_pred HhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCCeEEEEEEEecccccccccccccccccc
Confidence 000 00000 1112357999999999865321 1112222 122221110 010000000000
Q ss_pred ecC-ceeEEe-CCcchHHHHHhHHHHHHHhhcccCCC--CCCce-EEEEcCCChHHHHHHHHHcCCCcc-----------
Q 016094 261 KEM-GWDYTL-SKDLPVIIGKYIDKLLADAMSPIGIS--DWNSL-FYIVHPGGKVILDQVEQNLGLGKE----------- 324 (395)
Q Consensus 261 ~~~-g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~--~~~di-~~i~H~~~~~~~~~i~~~lgi~~e----------- 324 (395)
.+. .+.-.+ ...+. .......+.+++++++|++ + +|| .+=+|-......-...+.||+.+.
T Consensus 275 ~~~~~~~~~~~~~~~~--~~~~~~~a~~~a~~~AGl~~~~-~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~ 351 (430)
T PRK06365 275 NESPDDYKDLRYPGVH--SFRAGRMAAKEAYEMAGITDPL-NDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGK 351 (430)
T ss_pred cccccccccccccccc--ccHHHHHHHHHHHHHcCCCCCH-HHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCC
Confidence 000 000000 00011 1122346888999999998 6 899 888888766666677899998752
Q ss_pred -----cchHH-HHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 325 -----KLGAS-RYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 325 -----k~~~~-~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
+++.| .==.--+||...|+-...+.+++.+
T Consensus 352 ~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~Q 387 (430)
T PRK06365 352 PELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQ 387 (430)
T ss_pred cCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHH
Confidence 22221 0012347999988888888877775
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.6e-10 Score=111.63 Aligned_cols=247 Identities=15% Similarity=0.144 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g 182 (395)
..+|+.+|+++||+++|++++|||.+++.+..+ +.....+++.||+...+ ...+..+|+++..++..|...|++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~---~~~~~~~~~~lGl~~~~--~~~v~~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDAP---GLGPASMVDYLGLKLRH--VDSTETGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCC---CccHHHHHHhCCCCCee--eccccCCcHHHHHHHHHHHHHHHcC
Confidence 789999999999999999999999987532111 11124699999997655 6778999999999999999999999
Q ss_pred CCCeEEEEEecccccc------------------cC------------------------------------------CC
Q 016094 183 PGARVLVVCCDITVLH------------------FH------------------------------------------EP 202 (395)
Q Consensus 183 ~~~~vLvv~~e~~s~~------------------~~------------------------------------------~~ 202 (395)
.++.|||++.|+.... |. +|
T Consensus 100 ~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~NP 179 (388)
T PRK08142 100 KCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNP 179 (388)
T ss_pred CCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhccCC
Confidence 9999999998864210 00 00
Q ss_pred C----c-hhhhh------------hhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCc
Q 016094 203 T----E-ARLDM------------LVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMG 264 (395)
Q Consensus 203 ~----~-~~~~~------------~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g 264 (395)
. . .+.++ +......+|||+|+||.+++... . ..+...+.+.+....+.. ..
T Consensus 180 ~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l-~~~~v~I~g~~~~~~~~~-----~~----- 248 (388)
T PRK08142 180 HAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSL-KRPLVKVLGAGEAIKGQM-----GG----- 248 (388)
T ss_pred hhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhc-CCCCEEEEEEEEecCCcc-----cc-----
Confidence 0 0 00000 11223558999999999865321 1 112244444332211100 00
Q ss_pred eeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-----------------cc
Q 016094 265 WDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE-----------------KL 326 (395)
Q Consensus 265 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e-----------------k~ 326 (395)
.+++. ......+++++++++|+++ +|| .+=+|-.....--...+.||+.+. ++
T Consensus 249 -----~~~~~---~~~~~~aa~~a~~~AGi~~-~did~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~l 319 (388)
T PRK08142 249 -----KVDLT---YSGAAWSGPAAFAEAGVTP-ADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKL 319 (388)
T ss_pred -----Ccccc---cHHHHHHHHHHHHHcCCCH-HHCCEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCc
Confidence 01111 1122467889999999997 999 888888776666667788998542 12
Q ss_pred hHHH-HHHHhcCCCCcchHHHHHHHHHhhhhhh----hcccCCCCCceEEEEEEcc
Q 016094 327 GASR-YALSEYGNLGAPSVLFILDDVRKKSTEE----RKATTGEGLEYGVLFGFGP 377 (395)
Q Consensus 327 ~~~~-~~~~~~Gn~~sasi~~~L~~~~~~~~~~----g~l~~G~~~d~vll~~~G~ 377 (395)
+.|- -=+.-.||...|+-+..+.++..+...+ .+++ + .++.|..+.|.
T Consensus 320 PvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag~~rQV~-~--a~~gl~~~~Gg 372 (388)
T PRK08142 320 PFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAHPAVQVP-N--CDLALAHGTGG 372 (388)
T ss_pred cccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCCCCCCCC-C--CcEEEEeCCCC
Confidence 2210 0023368888888888888877763210 1222 2 25677777664
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.26 E-value=4e-10 Score=114.60 Aligned_cols=262 Identities=16% Similarity=0.138 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQP--VSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~--~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|++ +++||.+++++............+++.||+.+.+ ......||+++..++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~--~~~~~~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPAR--TVYSPVGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcc--eeEecCCCHHHHHHHHHHHHHHH
Confidence 7899999999999999999 9999999987653322234457899999997665 44567788899999999999999
Q ss_pred cCCCCeEEEEEecccccc---------------------------------c------CCCC------------------
Q 016094 181 NNPGARVLVVCCDITVLH---------------------------------F------HEPT------------------ 203 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~---------------------------------~------~~~~------------------ 203 (395)
+|.++.|||+++|+++.. + ..|.
T Consensus 105 sG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~yal~a~ay~~~~G~t~ 184 (498)
T PRK08257 105 AGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVYPLFENALRAALGRSP 184 (498)
T ss_pred CCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHHHHHHHHHHHHhCcCH
Confidence 999999999999974310 0 0000
Q ss_pred -c----------h-----------------hhhhhh----------------hhh-hhccccEEEEEecCCCCC-CC--C
Q 016094 204 -E----------A-----------------RLDMLV----------------GQA-IFGDGAAAAIIGADPDVS-LN--E 235 (395)
Q Consensus 204 -~----------~-----------------~~~~~~----------------~~~-l~GDGAaA~vL~~~~~~~-~~--~ 235 (395)
+ . +.++.. ... ...|||+|+||...+... ++ .
T Consensus 185 e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~ 264 (498)
T PRK08257 185 EEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPE 264 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEEEEeeHHHHHhcCCCC
Confidence 0 0 000000 011 268999999988754321 10 0
Q ss_pred CCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH
Q 016094 236 RPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ 314 (395)
Q Consensus 236 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~ 314 (395)
.....+.+.+....+.. +.+ .+++.. ...+..+.+++++++|+++ +|| .+=+|-.....-..
T Consensus 265 ~~~V~i~g~a~~~~~~~-------~~~-------r~~~~~--~~~~~~aa~~a~~~AGi~~-~Did~~elydcF~~~~~~ 327 (498)
T PRK08257 265 DRWVYLHGGADAHDPYD-------ILE-------RPDLHR--SPAIRAAGRRALALAGLGI-DDIDAFDLYSCFPSAVQV 327 (498)
T ss_pred CceEEEEEEEEeeCccc-------ccc-------cccccc--ChHHHHHHHHHHHHhCCCH-HHCCEEEeccCCHHHHHH
Confidence 01122333222111100 000 011111 1123457889999999997 999 88889887777777
Q ss_pred HHHHcCCCcc-cchHH-HHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccce-eeeeeEEecc
Q 016094 315 VEQNLGLGKE-KLGAS-RYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGIT-VETVVLRSIP 390 (395)
Q Consensus 315 i~~~lgi~~e-k~~~~-~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~-~~a~llr~~~ 390 (395)
..+.||+.++ +.+.| --=+.-+||.+.++-+..+.++.++.. | +++ .+.|..+.|.-++ ....+|...+
T Consensus 328 ~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLR--g--~~~---~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 328 AARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLR--A--NPG---RRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred HHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHh--h--cCC---CEEEEECCCChhhceEEEEEeCCC
Confidence 8899999866 22221 011355799999998888888887621 1 134 6777777774333 3344555543
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.5e-11 Score=116.66 Aligned_cols=267 Identities=15% Similarity=0.176 Sum_probs=166.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CCCcC---EEEEEecCC-C--------------------------CCC-C
Q 016094 93 DARHAMLIEEVPKLGKEAALKAIKEWGQP-VSKIT---HLIFGAVYG-V--------------------------DMP-G 140 (395)
Q Consensus 93 ~~~~~~~~~~~~~la~~Aa~~aL~~agi~-~~~Id---~li~~s~~~-~--------------------------~~p-~ 140 (395)
..+..++......|+..|+.+||+++|++ ....+ .+++++... . .++ .
T Consensus 61 ~~~~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 140 (412)
T COG0304 61 AKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNL 140 (412)
T ss_pred chHHhhcccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccch
Confidence 33444477788999999999999999997 33342 344444321 0 122 3
Q ss_pred HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccc-c--------------cc------c
Q 016094 141 ADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDIT-V--------------LH------F 199 (395)
Q Consensus 141 ~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~-s--------------~~------~ 199 (395)
.+..++..+|++.. .+.+..+|+++..||..|.++|+.|..+.+++.++|.. + .. .
T Consensus 141 ~a~~vs~~~g~~G~---~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~a 217 (412)
T COG0304 141 AAGNVAIVFGLKGP---NYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKA 217 (412)
T ss_pred HHHHHHHHhCCCCC---cCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCcccc
Confidence 46788999999876 57889999999999999999999999999999999772 1 11 1
Q ss_pred CCCCchhhhhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHH
Q 016094 200 HEPTEARLDMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIG 278 (395)
Q Consensus 200 ~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 278 (395)
.+|.| .+| .++++|+||+++||+..+... .|.+...++.+.+.. .+++|++... + -.
T Consensus 218 srPfd---~~R-dGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~--------------~Da~h~t~P~--p--~g 275 (412)
T COG0304 218 SRPFD---KNR-DGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTT--------------SDAYHITAPA--P--DG 275 (412)
T ss_pred CCCCC---CCC-CCEEEecceeEEEecChhhHHhCCCceEEEEEEEEec--------------ccccccCCCC--C--CC
Confidence 11222 233 589999999999999877531 222234455554321 1222222211 0 12
Q ss_pred HhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHH
Q 016094 279 KYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVR 352 (395)
Q Consensus 279 ~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~ 352 (395)
....++++.+|+++|+++ +|| |+..|-.+.+.-+ .+.+.++--..+++.+ .+-..+||+-.|.-.+-+.-.+
T Consensus 276 ~Ga~~am~~AL~~Agl~~-~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vs-stKs~tGH~lGAaGaveai~~~ 353 (412)
T COG0304 276 EGAIRAMRAALADAGLTP-EDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVS-STKSLTGHTLGAAGAVEAIISL 353 (412)
T ss_pred chHHHHHHHHHHHcCCCH-hHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceee-ecccccccChhhHHHHHHHHHH
Confidence 334578999999999998 999 9999998875544 4455566322222211 1345677776554333222111
Q ss_pred hhhhhhhcccC-----------------------CCCCceEEEEEEcccceeeeeeEEe
Q 016094 353 KKSTEERKATT-----------------------GEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 353 ~~~~~~g~l~~-----------------------G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
... .+|.+.| .. .+.+|.-+||-|.+-++++++.
T Consensus 354 l~l-~~g~ippt~n~~~~dp~~~~l~~v~~~~~~~~-~~~~lsnsfGFGG~Na~lv~~~ 410 (412)
T COG0304 354 LAL-RDGIIPPTINLDNPDPEAADLDVVPNEARTGA-VRAALSNSFGFGGTNASLVFKR 410 (412)
T ss_pred HHH-hcCCcCCCCCcCCCCcccccccccCCcccccc-eeEEEecccccCCcceEEEEec
Confidence 100 0011111 00 1567788899888888887765
|
|
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.4e-10 Score=104.46 Aligned_cols=243 Identities=16% Similarity=0.105 Sum_probs=137.5
Q ss_pred HHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 100 IEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 100 ~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
++....|..+|++.||++++++++|||.++.+--..+. ..+.+.++.|++| ++-+-.+|++...+|.+|..++
T Consensus 48 EkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~--i~s~f~ar~l~iP-----f~GlygACST~~e~l~laa~~v 120 (329)
T PF07451_consen 48 EKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI--ISSSFAARDLGIP-----FLGLYGACSTMMESLALAAMLV 120 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC--CHHHHHHHHHT-------EEEB--CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh--HHHHHHHHhcCCC-----ccchhhHHHHHHHHHHHHHHHH
Confidence 34577899999999999999999999999988766544 3458999999985 6789999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc---ccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCce
Q 016094 180 ENNPGARVLVVCCDITVL---HFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNV 256 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~---~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 256 (395)
..|-+++||+.++-+... +|+-|.+-.-+...+...---||+|+||++.... +...-...|. ..
T Consensus 121 dgg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~-----p~It~~T~Gk--------Vv 187 (329)
T PF07451_consen 121 DGGFADYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGSG-----PRITHATIGK--------VV 187 (329)
T ss_dssp HTTS-SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--S-----EEEEEEE------------B
T ss_pred hCCCcceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCCC-----cEEEEEEEEE--------EE
Confidence 999999999999887652 4655543311222233344568899999987653 1212111111 01
Q ss_pred eeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcC---CChHHHHHHHHHcCCCcccchHHHHH
Q 016094 257 VGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHP---GGKVILDQVEQNLGLGKEKLGASRYA 332 (395)
Q Consensus 257 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~---~~~~~~~~i~~~lgi~~ek~~~~~~~ 332 (395)
++.+.+. +.| -..+.....+.|.+.|++.|.++ +|. .++.-- .+..++..+.++-|++.++.+.+.-.
T Consensus 188 D~G~~D~---~nM----GaAMAPAA~dTI~~h~~D~g~~p-~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG~ 259 (329)
T PF07451_consen 188 DMGIKDP---NNM----GAAMAPAAADTIEQHFKDTGRSP-DDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCGL 259 (329)
T ss_dssp -SS---T---T-H----HHHHHHHHHHHHHHHHHHCT--G-GG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHHH
T ss_pred EcCCCCc---ccc----hhhHhHHHHHHHHHHHHHhCCCh-hhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCCe
Confidence 1111110 111 12334445567888999999997 888 666544 45788888888888887653322000
Q ss_pred -----H-H--hcCCCCcchHHHHHH-HHHhhhhhhhcccCCCCCceEEEEEEcc
Q 016094 333 -----L-S--EYGNLGAPSVLFILD-DVRKKSTEERKATTGEGLEYGVLFGFGP 377 (395)
Q Consensus 333 -----~-~--~~Gn~~sasi~~~L~-~~~~~~~~~g~l~~G~~~d~vll~~~G~ 377 (395)
- + .-|-.|++-.-.++. +++++ +++|++ .+||+++.|+
T Consensus 260 ~iyd~~~Qdv~aGGSGcgCSA~V~~g~ll~~-l~~g~~------krvL~vaTGA 306 (329)
T PF07451_consen 260 MIYDPEKQDVHAGGSGCGCSAVVLCGYLLPK-LRKGEL------KRVLFVATGA 306 (329)
T ss_dssp CSS-TT-S--TT-EESHHHHHHHHHHCHHHH-HHTTS-------SEEEEEEEEE
T ss_pred EeecCCccccccCCCCcchHHHHHHHHHHHH-HHcCCc------eEEEEEEchh
Confidence 0 0 123334433334443 34433 222433 5899999997
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-09 Score=106.95 Aligned_cols=228 Identities=18% Similarity=0.060 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHHcC-CCC-CCcCEEEEEecCCC-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWG-QPV-SKITHLIFGAVYGV-DMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~ag-i~~-~~Id~li~~s~~~~-~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++| +++ +|||.+++++...+ ........++..||+...+ .+.+ |+++..++..|...|
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~--~~~v---~~sg~~a~~~A~~aV 99 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRP--TMTV---AGDGLQGLAHAVMHI 99 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCC--eEEE---eCcHHHHHHHHHHHH
Confidence 78999999999999999 997 79999987542111 1112224577889985444 3344 889999999999999
Q ss_pred HcCCCCeEEEEEeccccc--------------ccC-------------------------------------------CC
Q 016094 180 ENNPGARVLVVCCDITVL--------------HFH-------------------------------------------EP 202 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~--------------~~~-------------------------------------------~~ 202 (395)
++|.+++|||++.|+.+. .|. +|
T Consensus 100 ~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~NP 179 (385)
T PRK06066 100 NSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSNP 179 (385)
T ss_pred HcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCC
Confidence 999999999999886421 010 01
Q ss_pred C----ch-h------------hhhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCc
Q 016094 203 T----EA-R------------LDMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMG 264 (395)
Q Consensus 203 ~----~~-~------------~~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g 264 (395)
. ++ + +-........+|||+|+||.+++... .+..+ ..+.+.+....... .. .
T Consensus 180 ~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~p-v~I~g~g~~~~~~~---~~----~-- 249 (385)
T PRK06066 180 RASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDP-VWIKGIGWSTESSN---LE----T-- 249 (385)
T ss_pred hhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCCcc---cc----c--
Confidence 0 00 0 00112334568999999999865321 11112 24544332110000 00 0
Q ss_pred eeEEeCCcchHHHHHhHHHHHHHhhcccCCC--CCCce-EEEEcCCChHHHHHHHHHcCCCc--cc--------------
Q 016094 265 WDYTLSKDLPVIIGKYIDKLLADAMSPIGIS--DWNSL-FYIVHPGGKVILDQVEQNLGLGK--EK-------------- 325 (395)
Q Consensus 265 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~--~~~di-~~i~H~~~~~~~~~i~~~lgi~~--ek-------------- 325 (395)
.++.. ......+.+++++++|++ + +|| .+-+|-.....--...+.||+.+ |.
T Consensus 250 ------~~~~~--~~~~~~Aa~~a~~~AGi~~p~-~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~ 320 (385)
T PRK06066 250 ------AELGK--ANYMRIAADMAYKMAGIESPR-KEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGE 320 (385)
T ss_pred ------ccccc--cHHHHHHHHHHHHHcCCCCCH-HHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCC
Confidence 00000 112235788999999998 5 888 88888877666667788999876 22
Q ss_pred chHH-HHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 326 LGAS-RYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 326 ~~~~-~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
++.| .-=.-.+||...++-+..+.++..+
T Consensus 321 ~PvN~~GG~la~Ghp~gatG~~~v~e~~~Q 350 (385)
T PRK06066 321 LPVNPSGGHLAKGVPLEASGLSLLLDAVEY 350 (385)
T ss_pred ccccCCCchhcCCCccchhHHHHHHHHHHH
Confidence 1111 0001237999888888888877775
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.6e-11 Score=110.20 Aligned_cols=94 Identities=19% Similarity=0.138 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
+.+|+.+|++.+|++++++|++||.|++++..+ ...+..+..++...|++...+ .+.++.+|+|++.||..|...|++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp-~~~V~~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP-ATTVNRACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE-EEEEE-GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc-eeeehhhhhHHHHHHHHhhhhhcC
Confidence 889999999999999999999999999999988 456778888889999987654 889999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|..+.+|++|+|++|.
T Consensus 105 G~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 105 GEADVVLAGGVESMSR 120 (264)
T ss_dssp TS-SEEEEEEEEETTT
T ss_pred CCccEEEEeccccccc
Confidence 9999999999999986
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-09 Score=126.62 Aligned_cols=225 Identities=13% Similarity=0.062 Sum_probs=145.5
Q ss_pred HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCCCCch--hhh
Q 016094 141 ADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHEPTEA--RLD 208 (395)
Q Consensus 141 ~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~~~~~--~~~ 208 (395)
.+.+|+..||+++. .+.+..+|+|++.||++|.+.|.+|.++.+|+.+++..... ...+... .++
T Consensus 185 ~A~RIS~~f~L~Gp---s~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGGM---NCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 47899999999986 67899999999999999999999999999999998763210 0111111 122
Q ss_pred hhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHH
Q 016094 209 MLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLAD 287 (395)
Q Consensus 209 ~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 287 (395)
....++++|+|++++||.+-.... .|.+....+.+.+.. .+|....+ ..+. .....++|++
T Consensus 262 ~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~--------------~DG~~~~i--taP~--~~gq~~~i~~ 323 (2582)
T TIGR02813 262 IDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGAS--------------SDGKFKSI--YAPR--PEGQAKALKR 323 (2582)
T ss_pred CCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEc--------------CCCCCCCC--cCCC--HHHHHHHHHH
Confidence 233689999999999999865431 112223344443321 11210000 0111 2234578999
Q ss_pred hhcccCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCc---ccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhh
Q 016094 288 AMSPIGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGK---EKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEE 358 (395)
Q Consensus 288 ~L~~~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~---ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~ 358 (395)
+|+++|+++ ++| |+-.|..+... ...+.+.++-.. ..+..+ .+-..+||+.+|+-...|-...-. +++
T Consensus 324 Al~~Agi~p-~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vg-SvKs~iGH~~~AAG~a~lik~~la-l~~ 400 (2582)
T TIGR02813 324 AYDDAGFAP-HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALG-SVKSQIGHTKSTAGTAGMIKAVLA-LHH 400 (2582)
T ss_pred HHHHcCCCH-HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceee-ccccccccchHhHHHHHHHHHHHH-Hhc
Confidence 999999997 999 99999977655 445667776432 122221 145789999999988877654321 000
Q ss_pred hcccC-------------------------------CCCCceEEEEEEcccceeeeeeEEec
Q 016094 359 RKATT-------------------------------GEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 359 g~l~~-------------------------------G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
+.+.+ .....++++-+||-|.+-..++|+-.
T Consensus 401 ~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 401 KVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred CCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 22211 00114678889999999999999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.3e-09 Score=102.03 Aligned_cols=84 Identities=18% Similarity=0.192 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEP-SVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~-~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|++++|||.+++.+. . ..+ ...+++.||+.+ .+ ...+..+|+++..+|..|...|++
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~--~~~l~~~lGl~~~~~--~~~v~~gg~sg~~~~~~A~~~I~s 97 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNP--EIAVARALGIGELKF--FSRIHYGGGAACATVQQAAMAVAT 97 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-ccc--HHHHHHHCCCCCCcc--eeeecCCcHHHHHHHHHHHHHHHC
Confidence 7899999999999999999999999986432 1 112 256889999976 33 567899999999999999999999
Q ss_pred CCCCeEEEEEe
Q 016094 182 NPGARVLVVCC 192 (395)
Q Consensus 182 g~~~~vLvv~~ 192 (395)
|.++.|||++.
T Consensus 98 G~~d~vLv~g~ 108 (386)
T PRK07855 98 GVADVVVCYRA 108 (386)
T ss_pred CCCCEEEEEee
Confidence 99999999987
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.02 E-value=8.6e-10 Score=101.75 Aligned_cols=94 Identities=19% Similarity=0.125 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
+.+|+..|++.+|+++.+++++++-||++.... ......+.+.+---||+.... +..++.-|+|++.|+.+|.+-|..
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~-~tTvNkvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVP-ATTVNKVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCccee-eEeehhhhhhhHHHHHHHHHHHhc
Confidence 889999999999999999999999999998877 555567788888889998776 899999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|..+.|+..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999873
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=2e-09 Score=106.98 Aligned_cols=92 Identities=20% Similarity=0.166 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|++++|||.+++++... +........+++.+|+++.+ +..++.+|+++..++..|...|++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~--~~~v~~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIP--VTRVENFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCC--EEEEecccHHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999887543 21122236788899998654 778999999999999999999999
Q ss_pred CCCCeEEEEEecccc
Q 016094 182 NPGARVLVVCCDITV 196 (395)
Q Consensus 182 g~~~~vLvv~~e~~s 196 (395)
|.++.||++++|+++
T Consensus 105 G~~d~vlv~G~e~~s 119 (398)
T PRK06157 105 GAYDIALALGVEKLK 119 (398)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999865
|
|
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-09 Score=102.07 Aligned_cols=217 Identities=18% Similarity=0.192 Sum_probs=139.3
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCCC---CcC----EEEEEecC----------------------CCCCC-----CHHHH
Q 016094 99 LIEEVPKLGKEAALKAIKEWGQPVS---KIT----HLIFGAVY----------------------GVDMP-----GADVR 144 (395)
Q Consensus 99 ~~~~~~~la~~Aa~~aL~~agi~~~---~Id----~li~~s~~----------------------~~~~p-----~~a~~ 144 (395)
.......|+..|+++||+++++.+. +.| +|.+++.. |+..| -.+.+
T Consensus 90 ~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~ 169 (440)
T KOG1394|consen 90 RMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGY 169 (440)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccch
Confidence 3445778999999999999998765 222 55556542 32333 23579
Q ss_pred HHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c----------CCCCch--hh
Q 016094 145 LMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F----------HEPTEA--RL 207 (395)
Q Consensus 145 l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~----------~~~~~~--~~ 207 (395)
|+.++|+... -..+..+|+++..++--|..+|+.|.++..|..++|.+... | .+|+.. .+
T Consensus 170 vsm~~gl~Gp---nhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPf 246 (440)
T KOG1394|consen 170 VSMKYGLRGP---NHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPF 246 (440)
T ss_pred hhhhhcCcCC---chhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCC
Confidence 9999999875 46789999999999999999999999999999998876321 1 122211 11
Q ss_pred hhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHH
Q 016094 208 DMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLA 286 (395)
Q Consensus 208 ~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 286 (395)
.....++++|+|++.+||+.-+... .|.....++++.+- ..+.+|++-.+ + -......+|+
T Consensus 247 D~~RdGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygl--------------s~Da~HiT~P~--~--dG~Ga~~am~ 308 (440)
T KOG1394|consen 247 DKKRDGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGL--------------SSDAYHITSPD--P--DGAGAVLAME 308 (440)
T ss_pred ccCCCceeeccceeEEehHhHHHHHHcCCceeHHhhcCcc--------------cccccccCCCC--C--CcchHHHHHH
Confidence 1122579999999999999865431 11112234443221 11222222200 0 1223456889
Q ss_pred HhhcccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCccc--chHHHHHHHhcCCCC
Q 016094 287 DAMSPIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEK--LGASRYALSEYGNLG 340 (395)
Q Consensus 287 ~~L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek--~~~~~~~~~~~Gn~~ 340 (395)
++|+.+|+++ +|| |+-.|..+..+=| ++.+.|+-.... +-. +--..||+-
T Consensus 309 raL~~Agl~p-e~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsS---tKgaiGHLL 366 (440)
T KOG1394|consen 309 RALKDAGLSP-EDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSS---TKGAIGHLL 366 (440)
T ss_pred HHHHHcCCCh-hhcCeeecccccCcCchHHHHHHHHHHhccCCccccccc---ccchhhhhc
Confidence 9999999997 999 9999998765533 455556543333 222 244556653
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.3e-09 Score=104.82 Aligned_cols=93 Identities=16% Similarity=0.198 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCC--cCEEEEEecCC-C--CCCCHHHHHHHHcCCC-------CccccceeeccccchHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSK--ITHLIFGAVYG-V--DMPGADVRLMNLLGLE-------PSVNRLMIYSQGCYMGGA 170 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~--Id~li~~s~~~-~--~~p~~a~~l~~~LGl~-------~~~~~~~~i~~~C~s~~~ 170 (395)
..+|+.+|+++||+++|++++| ||.+++++... . ..+..+..++..+|++ ..+ .+.++.+|+|++.
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p--~~~V~~~caSG~~ 125 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKP--AMRVEGACASGGL 125 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCc--eeEEECcCHHHHH
Confidence 7899999999999999999999 99999987654 2 2355667777565554 444 7899999999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccccc
Q 016094 171 VIRHAKDIAENNPGARVLVVCCDITVL 197 (395)
Q Consensus 171 al~~A~~ll~~g~~~~vLvv~~e~~s~ 197 (395)
|+..|.++|++|.++.||++++|+++.
T Consensus 126 Ai~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 126 AVQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 999999999999999999999998754
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-08 Score=94.77 Aligned_cols=137 Identities=20% Similarity=0.243 Sum_probs=93.4
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCc-----CEEEEEecCC-C---------------C--------CC
Q 016094 89 APSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKI-----THLIFGAVYG-V---------------D--------MP 139 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~I-----d~li~~s~~~-~---------------~--------~p 139 (395)
.+.+..+..........|+..|+.+||+++|+++.++ -.|++++... + . .|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 152 (254)
T PF00109_consen 73 FFGIPPREARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLP 152 (254)
T ss_dssp STCHHHHHHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHST
T ss_pred cccccchhhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccc
Confidence 3445555555566778899999999999999988533 2455565543 1 0 22
Q ss_pred -CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecc-ccc---------ccCCCCch--h
Q 016094 140 -GADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDI-TVL---------HFHEPTEA--R 206 (395)
Q Consensus 140 -~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~-~s~---------~~~~~~~~--~ 206 (395)
..+.+|+..+|+++. .+.+..+|+|++.||..|..+|++|.++.|||.++|. .+. ......+. .
T Consensus 153 ~~~a~~ia~~~gl~G~---~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~p 229 (254)
T PF00109_consen 153 NSAAGRIAILFGLRGP---SYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRP 229 (254)
T ss_dssp THHHHHHHHHHTB-SS---EEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGS
T ss_pred cccccchhhhcCCCCc---cccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccc
Confidence 246789999999986 5789999999999999999999999999999999994 331 01111111 0
Q ss_pred hhhhhhhhhhccccEEEEEecC
Q 016094 207 LDMLVGQAIFGDGAAAAIIGAD 228 (395)
Q Consensus 207 ~~~~~~~~l~GDGAaA~vL~~~ 228 (395)
+.....++++||||+++||++.
T Consensus 230 f~~~~~G~v~gEGa~~~vLe~~ 251 (254)
T PF00109_consen 230 FDPFADGFVLGEGAGALVLERL 251 (254)
T ss_dssp TBTTB-SB-BB-EEEEEEEEEH
T ss_pred cCCCCCCEEEECceEEEEEEEh
Confidence 1122368999999999999874
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.8e-07 Score=103.15 Aligned_cols=345 Identities=16% Similarity=0.158 Sum_probs=201.2
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCccee-----eeeechhhhhcCCCCcCCCCCCH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKR-----YFYLTEEILKENPNMSCYKAPSL 92 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R-----~~~~~~~~~~~~~~~~~~~~~~~ 92 (395)
|-|+|+++-+|. .-+.+++.+++.. ..+..-++.+ .+|=.+..+-..+ .+......++....++ +.+=.+
T Consensus 6 IAIiGm~~rfPg-a~~~~~~W~~l~~--g~~~i~~ip~-~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD-~~fFgi 80 (1061)
T COG3321 6 IAIIGMACRFPG-ADSPEEFWDLLKE--GRDEITEVPA-DRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFD-ALFFGI 80 (1061)
T ss_pred EEEEeccccCCC-CCCHHHHHHHHhc--CCceeeecCh-hhhhHhhccCCccccccccccccccccCCccccC-HHHcCC
Confidence 899999999999 6677888888732 1111111110 1122222222111 1111111111000011 001122
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-CCCC-------------------CHHHHHHHH
Q 016094 93 DARHAMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-VDMP-------------------GADVRLMNL 148 (395)
Q Consensus 93 ~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~~~p-------------------~~a~~l~~~ 148 (395)
..|.-...+....|..+.+-+||+++|+.++.+. +|+.+.+.. |... ..+.+++..
T Consensus 81 sPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~ 160 (1061)
T COG3321 81 SPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYV 160 (1061)
T ss_pred CHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHH
Confidence 3333344444555888999999999999999887 566666554 3211 257899999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCCCCch--hhhhhhhhhhh
Q 016094 149 LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHEPTEA--RLDMLVGQAIF 216 (395)
Q Consensus 149 LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~~~~~--~~~~~~~~~l~ 216 (395)
|++++. ...+..+|+|++.|+++|.+.|.+|.++.+|+.++...... +..++.. .+.....+++.
T Consensus 161 l~l~GP---s~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~ 237 (1061)
T COG3321 161 LGLSGP---SVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVR 237 (1061)
T ss_pred hcCCCC---CccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEE
Confidence 999975 67899999999999999999999999999999888765210 1112211 12233467899
Q ss_pred ccccEEEEEecCCCCCC-CCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCC
Q 016094 217 GDGAAAAIIGADPDVSL-NERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGIS 295 (395)
Q Consensus 217 GDGAaA~vL~~~~~~~~-~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~ 295 (395)
|+|++++||.+-..... |. ..+.++.. +. +..+|... +-..+. ...-.++++++|+++|++
T Consensus 238 geG~g~vvLKrl~~A~~dgd-~IyavI~g-sa------------vn~dG~~~--gltaP~--~~aQ~~v~~~al~~a~i~ 299 (1061)
T COG3321 238 GEGAGVVVLKRLSDAERDGD-RIYAVIRG-SA------------VNQDGRSN--GLTAPN--LEAQADVIREALADAGID 299 (1061)
T ss_pred eeeEEEEEEEEhHHHHhCCC-eEEEEEEe-ee------------eccCCCcC--CCCCCC--HHHHHHHHHHHHHhcCCC
Confidence 99999999998654211 11 22333211 11 01111100 111121 234567899999999999
Q ss_pred CCCce-EEEEcCCChHHHH-----HHHHHcCCCc-ccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC-----
Q 016094 296 DWNSL-FYIVHPGGKVILD-----QVEQNLGLGK-EKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT----- 363 (395)
Q Consensus 296 ~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~-ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~----- 363 (395)
+ ..| |+=.|..+..+-+ .+...++-.. +....--.+-.++||+.+|.-...|-...-. ...+.+.+
T Consensus 300 p-~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~La-l~~~~ip~~l~~~ 377 (1061)
T COG3321 300 P-ATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALA-LKHGYIPPTLHFD 377 (1061)
T ss_pred c-ccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHh-hhcCccCCcCCCC
Confidence 7 999 9999998766533 3445554322 2222111256788999988877776554432 01133332
Q ss_pred ------------------------CCCCceEEEEEEcccceeeeeeEEecc
Q 016094 364 ------------------------GEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 364 ------------------------G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
....-+.-+-+||.|.+-.-++++..+
T Consensus 378 ~~np~i~~~~sp~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 378 TPNPEIDFDSSPFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred CCCcCCccccCCeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 000145677788888888888887643
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.3e-08 Score=100.01 Aligned_cols=94 Identities=13% Similarity=-0.003 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|++.+|+++|+++++||.+++++..+ ...+..+..+.-..|++...+ .+.++++|++++.++..|..+|++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p-~~~V~~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTP-AYDLQQACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCc-eeeeechhhHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998664 223456666666666654332 789999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|.++.+|++++|.+|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999874
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=6.4e-07 Score=87.40 Aligned_cols=238 Identities=17% Similarity=0.080 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCC-CCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 016094 104 PKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDM-PGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182 (395)
Q Consensus 104 ~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~-p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g 182 (395)
.+|+.+|+++||+++|++++|||.++.++...... ......+...+|+....+ ...+. +++..++..|...|++|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~v~---~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPIN-ESHVE---MDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCc-eEEec---CcHHHHHHHHHHHHhcC
Confidence 79999999999999999999999885433211211 111234556788743221 23333 46888999999999999
Q ss_pred CCCeEEEEEeccccc------------c-cCCCCc----------------------h----------------------
Q 016094 183 PGARVLVVCCDITVL------------H-FHEPTE----------------------A---------------------- 205 (395)
Q Consensus 183 ~~~~vLvv~~e~~s~------------~-~~~~~~----------------------~---------------------- 205 (395)
.++.|||++.|+.+. . +..|.. .
T Consensus 101 ~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r 180 (352)
T PRK07937 101 EVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEPS 180 (352)
T ss_pred CCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc
Confidence 999999999986531 0 100100 0
Q ss_pred -hhh------------hhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCC
Q 016094 206 -RLD------------MLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSK 271 (395)
Q Consensus 206 -~~~------------~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 271 (395)
+.+ .+......+|||+|+||.+++... .+.++ ..+.+.+....+.. +. .+
T Consensus 181 it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~~---~~------------~~ 244 (352)
T PRK07937 181 ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESPS---LG------------AR 244 (352)
T ss_pred CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCcc---cc------------cc
Confidence 000 011123448999999999764321 11112 44444332211110 00 01
Q ss_pred cchHHHHHhHHHHHHHhhcc-cCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-cchHHHHHHHhcCCCCcchHHHHH
Q 016094 272 DLPVIIGKYIDKLLADAMSP-IGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE-KLGASRYALSEYGNLGAPSVLFIL 348 (395)
Q Consensus 272 ~v~~~~~~~~~~~i~~~L~~-~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e-k~~~~~~~~~~~Gn~~sasi~~~L 348 (395)
++.. . ...+.++++ +|+++ +|| .+=+|-......-...+.||+..+ ++..+=-.+. ||-..++-+..+
T Consensus 245 d~~~--~----~~~~~a~~~aAgi~~-~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~--ghp~gatG~~~~ 315 (352)
T PRK07937 245 DLTR--S----PSTALAAEAATGGDA-GGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA--ANPMFAAGLERI 315 (352)
T ss_pred cccc--H----HHHHHHHHHhcCCCH-HHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccchh--cCchhHHHHHHH
Confidence 1111 1 122334444 59997 999 888888877777778899998532 3333211232 888777777888
Q ss_pred HHHHhhhhhhhcccCCCCCceEEEEEEcc
Q 016094 349 DDVRKKSTEERKATTGEGLEYGVLFGFGP 377 (395)
Q Consensus 349 ~~~~~~~~~~g~l~~G~~~d~vll~~~G~ 377 (395)
.++..+ |+.+ +.++.|..+.|.
T Consensus 316 ~e~~~Q------L~g~-~a~~~l~~~~Gg 337 (352)
T PRK07937 316 GEAARH------IWDG-SARRALAHATSG 337 (352)
T ss_pred HHHHHH------Hhcc-CCCEEEEecccc
Confidence 887776 3322 126777777664
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.5e-06 Score=77.25 Aligned_cols=94 Identities=13% Similarity=0.098 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHH-HcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMN-LLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~-~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
+-+|...+.+..+++.+++|+.|.-|+++++..-......++++. .-|++...+ ...++..|+|++.|+...+.-|++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvp-v~tvNRqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccc-hhhhhhhhhhHHHHHHHHHHHHhc
Confidence 667888999999999999999999999999875222255556555 468988776 788999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|.++..|-.+.|.++.
T Consensus 140 G~ydIGla~GvESMt~ 155 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTT 155 (435)
T ss_pred Cceeeecccchhhhcc
Confidence 9999999999998875
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.4e-06 Score=82.21 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHc--CCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEW--GQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~a--gi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~l 178 (395)
..++.....+..+++. ++++.+||.+++++..+ ...+..+..++..+|++...+ .+.++.+|+|++.|+..|++.
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p-~~~V~~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVP-AVTVNRACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCC-ceEEeccchhHHHHHHHHHHH
Confidence 4445555555555433 57777788999988776 356688899999999996333 899999999999999999999
Q ss_pred HHcCCCCeEEEEEeccccc
Q 016094 179 AENNPGARVLVVCCDITVL 197 (395)
Q Consensus 179 l~~g~~~~vLvv~~e~~s~ 197 (395)
|++|..+.||+++.|++|.
T Consensus 106 I~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 106 IASGEADVVLAGGVEKMSD 124 (392)
T ss_pred HHCCCCCEEEEEeeeeccC
Confidence 9999999999999999986
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.3e-06 Score=76.49 Aligned_cols=91 Identities=23% Similarity=0.332 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENN 182 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g 182 (395)
..||+.+|..+||+++++.-++|+.-+++-..+. .....+..-++|+..-+ .+.+++.|+++..||-+|.++|++|
T Consensus 29 ypd~a~ea~tkal~da~ikys~vqqa~vgyvfgd--stcgqraiyevgmtgip--i~nvnnncatgssalflakqiiesg 104 (408)
T KOG1406|consen 29 YPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGD--STCGQRAIYEVGMTGIP--IYNVNNNCATGSSALFLAKQIIESG 104 (408)
T ss_pred CchHHHHHHHHHHHhcCCCHHHHHhhhheeeecC--CccchHHHHhccccCcc--eeeccCccccCchHHHHHHHHHhcC
Confidence 7799999999999999999999985554443331 12234555689998877 7999999999999999999999999
Q ss_pred CCCeEEEEEeccccc
Q 016094 183 PGARVLVVCCDITVL 197 (395)
Q Consensus 183 ~~~~vLvv~~e~~s~ 197 (395)
..+.||..+.|++..
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999863
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0002 Score=76.71 Aligned_cols=257 Identities=18% Similarity=0.216 Sum_probs=158.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC---C---CCC---------C-----HHHHHHHHcCCCCccccc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG---V---DMP---------G-----ADVRLMNLLGLEPSVNRL 158 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~---~---~~p---------~-----~a~~l~~~LGl~~~~~~~ 158 (395)
...|..+|.-+|+-++||.|.++. +++.+.+.+ . ..| . .+.+|.--+.+++. .
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGP---S 163 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGP---S 163 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCC---c
Confidence 677899999999999999998875 444443322 1 111 1 12334444556654 6
Q ss_pred eeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccc-----ccC-----CCCch--hhhhhhhhhhhccccEEEEEe
Q 016094 159 MIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVL-----HFH-----EPTEA--RLDMLVGQAIFGDGAAAAIIG 226 (395)
Q Consensus 159 ~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~-----~~~-----~~~~~--~~~~~~~~~l~GDGAaA~vL~ 226 (395)
+.+..+|+|.+.||+.|.+-+.+|+++.++|.++..... +|. .|... .++....+..-+||.+|++|.
T Consensus 164 ~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllq 243 (2376)
T KOG1202|consen 164 FSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQ 243 (2376)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEe
Confidence 788999999999999999999999999999988876432 121 12211 122233456678999999999
Q ss_pred cCCCCCCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEc
Q 016094 227 ADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVH 305 (395)
Q Consensus 227 ~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H 305 (395)
+..... +....+++..+ .+++ +++.|..|-.| +.-.+.+++..+++|+.+ +++ |+=.|
T Consensus 244 rk~~Ar---RvYAtilnart----NTDG-----fKEqGvTfP~G--------~~Q~qLi~e~Yse~Gl~P-~sv~YvEAH 302 (2376)
T KOG1202|consen 244 RKSLAR---RVYATILNART----NTDG-----FKEQGVTFPSG--------DMQEQLIRETYSEAGLNP-ESVVYVEAH 302 (2376)
T ss_pred hhHHHH---HHHHHhhcccc----CCCc-----hhhcCccCCCc--------HHHHHHHHHHHHhcCCCc-ccEEEEEec
Confidence 876542 11233333211 1111 22333222111 112367889999999997 998 88999
Q ss_pred CCChHHH-----HHHHHHcCCCcc--cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC---------------
Q 016094 306 PGGKVIL-----DQVEQNLGLGKE--KLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT--------------- 363 (395)
Q Consensus 306 ~~~~~~~-----~~i~~~lgi~~e--k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~--------------- 363 (395)
..+.++- ..|.+.+=-++. -+.-+ +-.+.||.-.||-.-+|+..+-. +++|-+.+
T Consensus 303 GtGTkVGDpQEaN~it~~fC~~Rt~pLLIGS--vKSNMGHaEPASGv~alaKills-mE~glip~NLHy~tPNp~ip~L~ 379 (2376)
T KOG1202|consen 303 GTGTKVGDPQEANGITRFFCATRTTPLLIGS--VKSNMGHAEPASGVCALAKILLS-MEEGLIPPNLHYNTPNPEIPALV 379 (2376)
T ss_pred cCCCCCCChHHhhhHHHHHhhcCCCceEeee--ccccCCCCCccchHHHHHHHHHH-HHhCcCCCccccCCCCCCcchhc
Confidence 8776552 233333321111 11112 35678998888888888776543 22244332
Q ss_pred --------------CCCCceEEEEEEcccceeeeeeEEec
Q 016094 364 --------------GEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 364 --------------G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
| ..|-+=+||-|.+-.-++||-.
T Consensus 380 dGrLkVVd~~lp~~G---GivGiNSFGFGGsN~HviLks~ 416 (2376)
T KOG1202|consen 380 DGRLKVVDRPLPWRG---GIVGINSFGFGGSNAHVILKSN 416 (2376)
T ss_pred cceeEEecCCCCccC---ceeeeeccccCCCceeEEeccC
Confidence 4 4677888998888777787764
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.63 E-value=8.8e-05 Score=67.18 Aligned_cols=94 Identities=18% Similarity=0.099 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|...|++.||+.+++.++.+|.||++.... ...-.++..+.-+.|.+...+ +..++.=|.|++.++..+.+-|.
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~p-ALtiNRLCGSGFQsiVNgaQ~I~ 106 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETP-ALTINRLCGSGFQSIVNGAQEIC 106 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccC-ceeehhhhcccHHHHHhhHHHhh
Confidence 789999999999999999999999999987643 111122344555556666665 88999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 016094 181 NNPGARVLVVCCDITVL 197 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~ 197 (395)
-|..+.||..+.|.+|.
T Consensus 107 vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 107 VGEAEIVLCGGTENMSQ 123 (396)
T ss_pred cCcceEEEecCcccccc
Confidence 99999999999999873
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.49 E-value=8.2e-05 Score=68.34 Aligned_cols=94 Identities=12% Similarity=0.154 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
+-||+.+|...+|++..++.+.+|.||+++.-. .-..+++...+-..|+++..+ +..+..+|-|.-.|+-....+|++
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktp-ahtvtmacissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTP-AHTVTMACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCc-cceeeeehhccchhhhccceeEee
Confidence 678999999999999999999999999999876 445577888888889988776 899999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|.++.++..+.|.+|+
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 9999999999998874
|
|
| >PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0027 Score=59.74 Aligned_cols=55 Identities=20% Similarity=0.257 Sum_probs=41.1
Q ss_pred HHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 332 ALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 332 ~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
.-+++||+++||+.+.|..++.... ...-.| ++|+|+++|+|.......+++.+.
T Consensus 150 ~~~~vGN~YTaSly~~L~SlL~~~~--~~~l~G---krI~~FSYGSG~~s~~fs~~v~~~ 204 (282)
T PF08540_consen 150 YSRQVGNMYTASLYLGLASLLSSAE--ADDLAG---KRIGMFSYGSGLASEFFSGRVQPG 204 (282)
T ss_dssp HHHHHB--GGGHHHHHHHHHHHHHH--SCHHTT----EEEEEEEETTTEEEEEEEEE-TT
T ss_pred HHHHcCceehHHHHHHHHHHhhccC--ccccCC---CEEEEEEecCCcceeEEEEEEeCC
Confidence 3478999999999999999994311 223368 999999999999999999988765
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A .... |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.059 Score=48.90 Aligned_cols=115 Identities=17% Similarity=0.077 Sum_probs=80.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCC----------------CCC---------CHHHHHHHHcCCCCccc
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGV----------------DMP---------GADVRLMNLLGLEPSVN 156 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~----------------~~p---------~~a~~l~~~LGl~~~~~ 156 (395)
....|+..++.+++++. +++|.+|++|..+. ..| ..+.++.-..|....
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~-- 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGP-- 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCc--
Confidence 36778888888888643 57889999988641 123 235666777776654
Q ss_pred cceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCC
Q 016094 157 RLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPD 230 (395)
Q Consensus 157 ~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~ 230 (395)
...+..+-.++..||..|..+++.| .+.||||+.|........... .......--|.|++|+++..
T Consensus 107 -~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~------~~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 -NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFR------PERDPPFPYALALVLSPGDS 172 (218)
T ss_pred -eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcc------cccCCCcCEEEEEEecCCCC
Confidence 5677888899999999999999999 899999999997642211100 00112244677888887665
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.028 Score=46.23 Aligned_cols=98 Identities=15% Similarity=0.158 Sum_probs=66.6
Q ss_pred HHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhc
Q 016094 282 DKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360 (395)
Q Consensus 282 ~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~ 360 (395)
..+++++|+++|++. +|+ .|=.|-......-...+.||++++++..+= =.--+||...|+=...+.+++.+..
T Consensus 25 ~~A~~~al~~ag~~~-~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~G-G~la~GHP~gasG~r~~~~l~~~L~---- 98 (123)
T PF02803_consen 25 VPAARKALERAGLTP-DDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNG-GALALGHPLGASGARLVVELAHQLR---- 98 (123)
T ss_dssp HHHHHHHHHHHT--G-GGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHhCCCc-cccchhhccchhhhHHHHhhccccccccccCccc-ccccccccccccccchhhhhHHHHH----
Confidence 367889999999997 999 999999887777788999999999887631 1344899988887777777776521
Q ss_pred ccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 361 ATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 361 l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
-+.| ++.+...-+.|..-.+++++.
T Consensus 99 ~~~~---~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 99 RRGG---RYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp HHTT---SEEEEEEEETTTEEEEEEEEE
T ss_pred Hhch---hhhhHHhcccceeeEEEEEEC
Confidence 1234 565655555555555677763
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.047 Score=42.07 Aligned_cols=74 Identities=20% Similarity=0.155 Sum_probs=43.7
Q ss_pred HHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHHHHcCCCCeEEEE
Q 016094 115 IKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKDIAENNPGARVLVV 190 (395)
Q Consensus 115 L~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~ll~~g~~~~vLvv 190 (395)
|+++|++++|||.+++...+ ......+.+.+|++.... ... -+.+|++-..+|..+..-=.-.+.+++|++
T Consensus 1 L~~~g~~~~did~~i~hq~~----~~~~~~~~~~lgi~~~~~-~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS----KKILDSIAKRLGIPPERF-PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS----HHHHHHHHHHHTS-GGGB-E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCC----HHHHHHHHHHcCCcHHHH-HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 68999999999999986633 334566889999986542 111 244566666666555542222345888888
Q ss_pred Eec
Q 016094 191 CCD 193 (395)
Q Consensus 191 ~~e 193 (395)
+.-
T Consensus 76 ~~G 78 (90)
T PF08541_consen 76 GFG 78 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.52 Score=47.57 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=53.1
Q ss_pred HHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc------------------cchHHHHHHHhcCCCCcc
Q 016094 282 DKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE------------------KLGASRYALSEYGNLGAP 342 (395)
Q Consensus 282 ~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e------------------k~~~~~~~~~~~Gn~~sa 342 (395)
..+++++|+++|+++ +|| .+=+|-.....--...+.||+.+. ++..+ ==+--+||...|
T Consensus 312 ~~A~~~a~~~AGl~~-~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GHP~gA 389 (438)
T PTZ00455 312 RAAAQKALSMAGVKP-SDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTG-GGLLSFGHPVGA 389 (438)
T ss_pred HHHHHHHHHHcCCCH-HHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCC-CchhhcCCCcch
Confidence 467889999999997 999 888898877777777899999862 33221 012447999988
Q ss_pred hHHHHHHHHHhh
Q 016094 343 SVLFILDDVRKK 354 (395)
Q Consensus 343 si~~~L~~~~~~ 354 (395)
+-...+.++..+
T Consensus 390 tG~~~v~e~~~Q 401 (438)
T PTZ00455 390 TGVKQIMEVYRQ 401 (438)
T ss_pred HHHHHHHHHHHH
Confidence 887777777665
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.18 Score=49.18 Aligned_cols=82 Identities=18% Similarity=0.095 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-----eeeccccchHHHHHHHHHHH
Q 016094 104 PKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRL-----MIYSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 104 ~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~-----~~i~~~C~s~~~al~~A~~l 178 (395)
...+.++++++|+++|++++|||.+++.... ...-..+.+.||++...... -.-+.++++-..+|..+...
T Consensus 207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~----~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~ 282 (345)
T TIGR00748 207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQPN----GKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI 282 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEeCCCC----hHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh
Confidence 3445688999999999999999999875532 23445689999997543101 12345677777777776654
Q ss_pred HHcCCCCeEEEEE
Q 016094 179 AENNPGARVLVVC 191 (395)
Q Consensus 179 l~~g~~~~vLvv~ 191 (395)
++. .++||+++
T Consensus 283 ~~~--Gd~vll~~ 293 (345)
T TIGR00748 283 AEP--GDRILAVS 293 (345)
T ss_pred cCC--CCEEEEEE
Confidence 443 46777766
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.12 Score=42.04 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=48.1
Q ss_pred HHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCc--ccchHHHHHHHhcCCCCcchHHHHHH
Q 016094 278 GKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGK--EKLGASRYALSEYGNLGAPSVLFILD 349 (395)
Q Consensus 278 ~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~--ek~~~~~~~~~~~Gn~~sasi~~~L~ 349 (395)
...+.++|+++|+++|+++ +|| ++..|-.+....+. +.+.++-.. ..++.+ .+-..+||+.+++-++.|.
T Consensus 24 ~~~~~~~i~~al~~agi~~-~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~Gh~~~asG~~~l~ 101 (119)
T PF02801_consen 24 GAALARAIRRALADAGISP-EDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVG-SVKSNIGHTEAASGLLSLA 101 (119)
T ss_dssp HHHHHHHHHHHHHHHTS-G-GGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE--THHHH-B-GGGHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcccc-ccceeeeeeccccccchhhhhhhhhhhhccccccccccee-ccccccccccccchHHHHH
Confidence 3456688999999999997 999 99999998887554 445555332 122322 2567899999999999988
Q ss_pred HHHhh
Q 016094 350 DVRKK 354 (395)
Q Consensus 350 ~~~~~ 354 (395)
..+-.
T Consensus 102 ~~~l~ 106 (119)
T PF02801_consen 102 KALLA 106 (119)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.4 Score=46.45 Aligned_cols=86 Identities=19% Similarity=0.216 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-ce--eeccccchHHHHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNR-LM--IYSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-~~--~i~~~C~s~~~al~~A~~l 178 (395)
.......++.+++|+++|++++|||.+++... .+..-..+.+.||++..... .+ .-+.++++...+|..+.
T Consensus 236 ~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~-- 309 (338)
T PRK09258 236 EGVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAA-- 309 (338)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHH--
Confidence 34556777899999999999999999887553 23345688999999764310 11 22334455555555443
Q ss_pred HHcC---CCCeEEEEEecc
Q 016094 179 AENN---PGARVLVVCCDI 194 (395)
Q Consensus 179 l~~g---~~~~vLvv~~e~ 194 (395)
+.| +.+++|+++.-.
T Consensus 310 -~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 310 -EEGFLKPGDRVALLGIGS 327 (338)
T ss_pred -HhCCCCCCCEEEEEEech
Confidence 333 347888877543
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.37 Score=46.24 Aligned_cols=82 Identities=12% Similarity=0.051 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY----SQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i----~~~C~s~~~al~~A~~l 178 (395)
..+...++++++|+++|++++|||.+++... .+..-..+++.||++.... ...+ +.++++-+.+|..+
T Consensus 217 ~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~-~~~~~~~Gn~~sas~~~~L~~~--- 288 (318)
T TIGR00747 217 AVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQV-VKTVHKYGNTSAASIPLALDEL--- 288 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHe-eehHhhhCCHHHHHHHHHHHHH---
Confidence 3445677899999999999999999986442 3345578899999986432 2222 33444444454433
Q ss_pred HHcC---CCCeEEEEEe
Q 016094 179 AENN---PGARVLVVCC 192 (395)
Q Consensus 179 l~~g---~~~~vLvv~~ 192 (395)
+++| +.+++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3333 3478887774
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.69 Score=45.76 Aligned_cols=91 Identities=10% Similarity=0.046 Sum_probs=57.1
Q ss_pred HhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHc-----CCCCcccc---ceeeccccchHHHHH
Q 016094 101 EEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLL-----GLEPSVNR---LMIYSQGCYMGGAVI 172 (395)
Q Consensus 101 ~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~L-----Gl~~~~~~---~~~i~~~C~s~~~al 172 (395)
+...+....+++++|+++|++++|||.++....+ +..-..++++| |++..-.. ...-+.+|++...+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n----~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSS----EYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCccc----HHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 3445566888999999999999999999865532 23345667766 78654310 112344666777777
Q ss_pred HHHHHHHHcCCCCeEEEEEeccc
Q 016094 173 RHAKDIAENNPGARVLVVCCDIT 195 (395)
Q Consensus 173 ~~A~~ll~~g~~~~vLvv~~e~~ 195 (395)
..+..-=.-.+.++|++++.+..
T Consensus 344 ~~a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 344 DELLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHHHcCCCCCCCEEEEEEeccc
Confidence 65533111123488888876653
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.92 Score=45.67 Aligned_cols=96 Identities=15% Similarity=0.079 Sum_probs=55.6
Q ss_pred HHHHHhhcccCCCCCCce-EEEEcCCChHHHHHH---HHHcCCC--------------cccchHHHHHHHhcCCCCcchH
Q 016094 283 KLLADAMSPIGISDWNSL-FYIVHPGGKVILDQV---EQNLGLG--------------KEKLGASRYALSEYGNLGAPSV 344 (395)
Q Consensus 283 ~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i---~~~lgi~--------------~ek~~~~~~~~~~~Gn~~sasi 344 (395)
.+++++|+++|+++ +|| .+=+|-......-.. .+.||+- ..++..+ ==.--+||...|+-
T Consensus 313 ~a~~~a~~~AGl~~-~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~-GG~la~GhP~gATG 390 (427)
T PRK09268 313 YAVPRLLARNGLTL-QDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVN-GSSLAAGHPFAATG 390 (427)
T ss_pred HHHHHHHHHcCCCH-HHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCC-cCHHhcCCCcccch
Confidence 57889999999997 999 888887654331111 2444432 1222221 00123689988887
Q ss_pred HHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEE
Q 016094 345 LFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 345 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr 387 (395)
...+.++..+.. + +.| .+.|...-++|..-.+++|+
T Consensus 391 ~~~v~e~~~QL~--~--~~~---~~gl~~~c~~gG~g~a~~~e 426 (427)
T PRK09268 391 GRIVATLAKLLA--E--KGS---GRGLISICAAGGQGVTAILE 426 (427)
T ss_pred HHHHHHHHHHHH--h--cCC---CEEEEEEcccCchheEEEEe
Confidence 777777776521 1 223 56555555545444566665
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.08 E-value=0.48 Score=47.39 Aligned_cols=74 Identities=14% Similarity=0.075 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee--------ccccchHHHHHHHHHHHH
Q 016094 108 KEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY--------SQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 108 ~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i--------~~~C~s~~~al~~A~~ll 179 (395)
..|++++|+++|++++|||.+.+... .......+.+.||++... .... -.|++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~~~--vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDRDK--VNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCChhh--ccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 57999999999999999999875432 223345677788876543 2221 235666666677777777
Q ss_pred HcCCCCeEE
Q 016094 180 ENNPGARVL 188 (395)
Q Consensus 180 ~~g~~~~vL 188 (395)
..| .++.|
T Consensus 392 ~~g-~~~Gl 399 (417)
T PRK06025 392 RRG-LKRGL 399 (417)
T ss_pred HhC-CCeEE
Confidence 666 45553
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.83 E-value=0.75 Score=44.42 Aligned_cols=82 Identities=13% Similarity=0.063 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~ 177 (395)
.......++.+++|+++|++++|||.+++..... ..-..+++.||++.... ... -+.+|++...+|..
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~~----~~~~~i~~~l~l~~e~~-~~~~~~~Gn~~sas~~~~L~~--- 298 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASG----PAMRLIRKKLGVDEERF-VTIFEDHGNMIAASIPVALFE--- 298 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHcCCCHHHh-hhhHhhhCcHHHHHHHHHHHH---
Confidence 4555677889999999999999999988755322 23468899999976532 111 12233333334433
Q ss_pred HHHcC---CCCeEEEEE
Q 016094 178 IAENN---PGARVLVVC 191 (395)
Q Consensus 178 ll~~g---~~~~vLvv~ 191 (395)
+++.| +.+++|+++
T Consensus 299 ~~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 299 AIKQKKVQRGNKILLLG 315 (329)
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 44444 347788776
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=91.67 E-value=0.5 Score=45.57 Aligned_cols=82 Identities=7% Similarity=0.024 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~l 178 (395)
..+...++++++|+++|++++|||.+++.. ..+..-..+.++||++.... ... -+.++++...+|.. +
T Consensus 225 ~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~-~~~l~~~Gn~~sas~~~~L~~---~ 296 (326)
T PRK05963 225 AVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKA-ASTLETYGNSSAATIPLSLSL---A 296 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHh-hhhHHhhCcHHHHHHHHHHHH---H
Confidence 455667889999999999999999988743 23345567899999976542 111 12333444444433 3
Q ss_pred HHcC---CCCeEEEEEe
Q 016094 179 AENN---PGARVLVVCC 192 (395)
Q Consensus 179 l~~g---~~~~vLvv~~ 192 (395)
+..+ +.+++|+++.
T Consensus 297 ~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 NLEQPLREGERLLFAAA 313 (326)
T ss_pred HHhCCCCCCCEEEEEEE
Confidence 3333 3478888774
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=91.26 E-value=1.5 Score=43.62 Aligned_cols=72 Identities=21% Similarity=0.165 Sum_probs=50.6
Q ss_pred HHHHHHhhcccCCC--CCCce-EEEEcCCChHHHHHHHHHcCCCcc----------------cchHH-HHHHHhcCCCCc
Q 016094 282 DKLLADAMSPIGIS--DWNSL-FYIVHPGGKVILDQVEQNLGLGKE----------------KLGAS-RYALSEYGNLGA 341 (395)
Q Consensus 282 ~~~i~~~L~~~g~~--~~~di-~~i~H~~~~~~~~~i~~~lgi~~e----------------k~~~~-~~~~~~~Gn~~s 341 (395)
..+.+++++++|++ + +|| .+=+|-......-...+.||+.+. +++.| .==.--+||...
T Consensus 269 ~~aa~~a~~~AGl~~~~-~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~g 347 (398)
T PRK06157 269 RIAARKAYREAGITDPR-EELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIG 347 (398)
T ss_pred HHHHHHHHHHcCCCCch-hcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCccc
Confidence 35778899999998 5 889 888888776666677889998762 11221 000134799988
Q ss_pred chHHHHHHHHHhh
Q 016094 342 PSVLFILDDVRKK 354 (395)
Q Consensus 342 asi~~~L~~~~~~ 354 (395)
|+-...+.++..+
T Consensus 348 atG~~~~~e~~~Q 360 (398)
T PRK06157 348 ASGLRMLYEMYLQ 360 (398)
T ss_pred HhHHHHHHHHHHH
Confidence 8877777777765
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.83 Score=44.31 Aligned_cols=81 Identities=17% Similarity=0.087 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee--eccccchHHHHHHHHHHHHHcC
Q 016094 105 KLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI--YSQGCYMGGAVIRHAKDIAENN 182 (395)
Q Consensus 105 ~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~--i~~~C~s~~~al~~A~~ll~~g 182 (395)
....++++++|+++|++++|||.++.... .+..-..++++||++........ -+.++++...+|. .++++|
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~---~~~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLH---LALEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHH---HHHHcC
Confidence 45578999999999999999999876443 23344678999999854311111 1233344444444 334444
Q ss_pred ---CCCeEEEEEe
Q 016094 183 ---PGARVLVVCC 192 (395)
Q Consensus 183 ---~~~~vLvv~~ 192 (395)
+.+++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 3477887774
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=90.89 E-value=0.91 Score=43.84 Aligned_cols=80 Identities=13% Similarity=0.101 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHHHH
Q 016094 105 KLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 105 ~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~ll~ 180 (395)
.....+++++|+++|++++|||.+++.... ......+++.||++.... ... -+.+|++...+|..+ ++
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~-~~~l~~~Gn~~sasi~~~L~~~---~~ 297 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKM-ITNLEKYGNTSAASIPLALDEA---IQ 297 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHh-hhHHHhhCcHHHHHHHHHHHHH---HH
Confidence 456778899999999999999999875532 334567899999985432 111 223444444444443 34
Q ss_pred cC---CCCeEEEEEe
Q 016094 181 NN---PGARVLVVCC 192 (395)
Q Consensus 181 ~g---~~~~vLvv~~ 192 (395)
.| +.+++|+++.
T Consensus 298 ~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 298 NNKIQPGQIIVLSGF 312 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 44 3477887763
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=90.51 E-value=1.2 Score=42.87 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-e-e-eccccchHHHHHHHHHHHHH
Q 016094 104 PKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRL-M-I-YSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 104 ~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~-~-~-i~~~C~s~~~al~~A~~ll~ 180 (395)
.+...++++++|+++|++++|||.+++... .+.....++++||++...... . . -+.+|++...+|. .+++
T Consensus 224 ~~~~~~~i~~~L~~~g~~~~did~~~~h~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~~ 296 (325)
T PRK12879 224 VRTMPKGARQVLEKAGLTKDDIDWVIPHQA----NLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LALE 296 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHHH
Confidence 345567889999999999999999987653 234456889999997543201 1 1 1223444444543 3345
Q ss_pred cC---CCCeEEEEEe
Q 016094 181 NN---PGARVLVVCC 192 (395)
Q Consensus 181 ~g---~~~~vLvv~~ 192 (395)
.| +.+++|+++.
T Consensus 297 ~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 297 QGKIKPGDTLLLYGF 311 (325)
T ss_pred cCCCCCCCEEEEEEE
Confidence 54 3467887774
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=89.36 E-value=1.4 Score=42.16 Aligned_cols=82 Identities=16% Similarity=0.101 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY----SQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i----~~~C~s~~~al~~A~~l 178 (395)
..+...++++++|+++|++++|||.+++... .+..-..+.+.||++.... ...+ +.++++...+|..+
T Consensus 221 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~-~~~~~~~Gn~~sas~~~~L~~~--- 292 (320)
T cd00830 221 AVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKV-VVNLDRYGNTSAASIPLALDEA--- 292 (320)
T ss_pred HHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHh-hhhHHhhCcHHHHHHHHHHHHH---
Confidence 4466778899999999999999999887653 2344467899999975442 1111 22333333444333
Q ss_pred HHcC---CCCeEEEEEe
Q 016094 179 AENN---PGARVLVVCC 192 (395)
Q Consensus 179 l~~g---~~~~vLvv~~ 192 (395)
++.| +.+++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 4588888774
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=89.12 E-value=2 Score=40.53 Aligned_cols=85 Identities=12% Similarity=0.210 Sum_probs=59.0
Q ss_pred HHHhHHHHHHHhhcccCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHH
Q 016094 277 IGKYIDKLLADAMSPIGISDWNSL-FYIVHP----GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDV 351 (395)
Q Consensus 277 ~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~----~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~ 351 (395)
+...+..+++++|+++|+++ +|| .+|.+- +.+.+-..+.+++|+..+-... .++=+|++.-+++++-+
T Consensus 83 ae~v~f~av~~LL~ktgv~p-~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~------nLsGMGCsAgliai~lA 155 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKP-SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSY------NLSGMGCSAGLIAIDLA 155 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeee------cccCCcchhhHHHHHHH
Confidence 44456788999999999997 998 665543 4467888999999998765433 46667777766666544
Q ss_pred HhhhhhhhcccCCCCCceEEEEEE
Q 016094 352 RKKSTEERKATTGEGLEYGVLFGF 375 (395)
Q Consensus 352 ~~~~~~~g~l~~G~~~d~vll~~~ 375 (395)
.+- =+..|+ .++|+++.
T Consensus 156 ~~l----L~~~p~---~~ALVVst 172 (290)
T PF08392_consen 156 KDL----LQAHPN---SYALVVST 172 (290)
T ss_pred HHH----HHhCCC---cEEEEEEE
Confidence 332 113556 77777764
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.87 E-value=1.1 Score=43.81 Aligned_cols=81 Identities=22% Similarity=0.189 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-----eeeccccchHHHHHHHHHHHH
Q 016094 105 KLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRL-----MIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 105 ~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~-----~~i~~~C~s~~~al~~A~~ll 179 (395)
....++++++|+++|++++|||.+++... .+.+-..++++||++..-... -.-+.++++-..+|..+..-+
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~~ 284 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQP----NGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDVA 284 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCC----chHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHhC
Confidence 45677899999999999999999887542 233446788899997653200 112345555556665554422
Q ss_pred HcCCCCeEEEEE
Q 016094 180 ENNPGARVLVVC 191 (395)
Q Consensus 180 ~~g~~~~vLvv~ 191 (395)
.+.+++|+++
T Consensus 285 --~~Gd~vll~~ 294 (347)
T PRK04262 285 --KPGDRILVVS 294 (347)
T ss_pred --CCCCEEEEEe
Confidence 3346676665
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=88.66 E-value=0.98 Score=44.16 Aligned_cols=89 Identities=20% Similarity=0.105 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCCHHHHHHHHcCCC--Ccc---ccceeeccccchHHHHHHHHHHHH
Q 016094 106 LGKEAALKAIKEWGQPVSKITHLIFGAV-YGVDMPGADVRLMNLLGLE--PSV---NRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 106 la~~Aa~~aL~~agi~~~~Id~li~~s~-~~~~~p~~a~~l~~~LGl~--~~~---~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
=..++.+++|+++|+++++||.|+.... +.+.....+..+.+.+|-. ..+ +....-+.+.+++...+..+...+
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~ 314 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAAS 314 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHH
Confidence 3468899999999999999998764332 2221112223333334321 111 002233344556666666666677
Q ss_pred HcC--CCCeEEEEEecc
Q 016094 180 ENN--PGARVLVVCCDI 194 (395)
Q Consensus 180 ~~g--~~~~vLvv~~e~ 194 (395)
+.| +..++||.+++.
T Consensus 315 ~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 315 RKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HcCcCCCCcEEEEecCC
Confidence 777 457899887554
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=88.62 E-value=1.6 Score=39.75 Aligned_cols=89 Identities=10% Similarity=0.097 Sum_probs=56.1
Q ss_pred HHHHHhHHHHHHHhhcccCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHH
Q 016094 275 VIIGKYIDKLLADAMSPIGISDWNSL-FYIVHP----GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILD 349 (395)
Q Consensus 275 ~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~----~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~ 349 (395)
+.+.+...++.+++|+++|+++ +|| ++|.=. ..+.+--.+.+.||++++--.. -++.+|++.-...|.
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~-~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~------~i~~~GC~gg~~~L~ 170 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDP-SDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRT------PIFGMGCAGGAAGLR 170 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-G-GGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEE------EEES-GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCC-cccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEE------EEeccchhhHHHHHH
Confidence 3455566678889999999997 999 765422 2345555889999998764443 367777777777776
Q ss_pred HHHhhhhhhhcccCCCCCceEEEEEEcc
Q 016094 350 DVRKKSTEERKATTGEGLEYGVLFGFGP 377 (395)
Q Consensus 350 ~~~~~~~~~g~l~~G~~~d~vll~~~G~ 377 (395)
.+.+= -+-.|| .+||++..=.
T Consensus 171 ~A~~~----~~~~p~---a~VLvv~vEl 191 (226)
T PF00195_consen 171 RAKDI----ARANPG---ARVLVVCVEL 191 (226)
T ss_dssp HHHHH----HHHSTT----EEEEEEEEE
T ss_pred HHHHH----HhCCcc---ceEEEEEEEe
Confidence 55442 112477 8999987653
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=88.37 E-value=2 Score=41.18 Aligned_cols=82 Identities=13% Similarity=0.031 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY----SQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i----~~~C~s~~~al~~A~~l 178 (395)
..+...++.+++|+++|++++|||.+++... .+..-..+.+.||++.... ...+ +.+|++.+..|. .+
T Consensus 217 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~-~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 217 AVRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKV-VVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHh-hhhHHhhCCHHHHHHHHHHH---HH
Confidence 3445677899999999999999999987542 2344567899999986542 1111 223333334443 44
Q ss_pred HHcC---CCCeEEEEEe
Q 016094 179 AENN---PGARVLVVCC 192 (395)
Q Consensus 179 l~~g---~~~~vLvv~~ 192 (395)
++.| +.+++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 3477887764
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=88.31 E-value=2 Score=41.21 Aligned_cols=78 Identities=15% Similarity=-0.033 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHH-HHHHHHcCCCCcc---ccceeeccccchHHHHHHHHHHHHH
Q 016094 105 KLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGAD-VRLMNLLGLEPSV---NRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 105 ~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a-~~l~~~LGl~~~~---~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
+...++++++|+++|+.++|||.++............. ..+....+..... .....-+.++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 44567899999999999999999987665442222221 2222333321001 0012345566777777777777776
Q ss_pred cC
Q 016094 181 NN 182 (395)
Q Consensus 181 ~g 182 (395)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 65
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=88.21 E-value=2.3 Score=42.09 Aligned_cols=82 Identities=11% Similarity=0.065 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~l 178 (395)
......++++++|+++|++++|||.++..... ..+-..++++||++.... ... -+.++++-..+|..+
T Consensus 278 ~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~-~~~l~~~GNt~sAsi~~~L~~~--- 349 (379)
T PLN02326 278 AVRCVPQVIESALQKAGLTAESIDWLLLHQAN----QRIIDAVAQRLGIPPEKV-ISNLANYGNTSAASIPLALDEA--- 349 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHe-eecHhhcCcHHHHHHHHHHHHH---
Confidence 34556678899999999999999998875532 234457899999986431 111 222344444444443
Q ss_pred HHcC---CCCeEEEEEe
Q 016094 179 AENN---PGARVLVVCC 192 (395)
Q Consensus 179 l~~g---~~~~vLvv~~ 192 (395)
++.| +.+++|+++.
T Consensus 350 ~~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 350 VRSGKVKKGDVIATAGF 366 (379)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 3477887763
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=88.18 E-value=1.3 Score=43.63 Aligned_cols=86 Identities=10% Similarity=0.044 Sum_probs=54.1
Q ss_pred HhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHH-cCCCCcccc-----ceeeccccchHHHHHHH
Q 016094 101 EEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNL-LGLEPSVNR-----LMIYSQGCYMGGAVIRH 174 (395)
Q Consensus 101 ~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~-LGl~~~~~~-----~~~i~~~C~s~~~al~~ 174 (395)
+...+...++++++|+++|++++|||.+++..... .+-..+.++ ||+.....+ .-.-+.+|++...+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~----~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANI----NMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 44566778999999999999999999998755332 222334555 565321100 12235567777777777
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 016094 175 AKDIAENNPGARVLVVCC 192 (395)
Q Consensus 175 A~~ll~~g~~~~vLvv~~ 192 (395)
+...+. +.+++|+++.
T Consensus 343 ~~~~~~--~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDLA--AGDLGVICSF 358 (372)
T ss_pred HhccCC--CCCEEEEEEe
Confidence 654433 3477887774
|
|
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=86.58 E-value=3 Score=38.23 Aligned_cols=87 Identities=17% Similarity=0.045 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHH-HHHcCCC----CccccceeeccccchHHHHHHHHHHH
Q 016094 104 PKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRL-MNLLGLE----PSVNRLMIYSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 104 ~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l-~~~LGl~----~~~~~~~~i~~~C~s~~~al~~A~~l 178 (395)
.+...++++++|+++|+.++|||.++...............+ ....+.. .... ...-+..++++...|..+...
T Consensus 144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~as~~~~l~~~~~~ 222 (254)
T cd00327 144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATL-IMTGHPLGAAGLAILDELLLM 222 (254)
T ss_pred hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccc-cccccchHHHHHHHHHHHHHH
Confidence 445678899999999999999999876554331111111111 1111221 0110 122455667777777777666
Q ss_pred HHcC-------CCCeEEEEE
Q 016094 179 AENN-------PGARVLVVC 191 (395)
Q Consensus 179 l~~g-------~~~~vLvv~ 191 (395)
++.+ +.+++++.+
T Consensus 223 ~~~~~~~~~~~~~~~~l~~~ 242 (254)
T cd00327 223 LEHEFIPPTPREPRTVLLLG 242 (254)
T ss_pred HhCCCcCCCCCCcCEEEEee
Confidence 6655 446666554
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=85.73 E-value=1.7 Score=41.91 Aligned_cols=54 Identities=9% Similarity=0.017 Sum_probs=42.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcc
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSV 155 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~ 155 (395)
...+.+..+..++++++|++++++++|||.++... .-..+-..++++||++...
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k 269 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEK 269 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHH
Confidence 34456888899999999999999999999998644 2233446789999997654
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=82.16 E-value=4.7 Score=33.09 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc------cceeeccccchHHHHHHHHHHHHH
Q 016094 107 GKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVN------RLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 107 a~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~------~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
...|++++|+++|++++|||.+=+.-. +....-...+.||++.... .+.-.-.||+|....+.++.++-.
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~ 99 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDPEKVNPNGGALALGHPLGASGARLVVELAHQLRR 99 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccccccCcccccccccccccccccchhhhhHHHHHH
Confidence 357999999999999999998865432 2233456677888865431 011112355665666666666655
Q ss_pred cCCCCeEEE
Q 016094 181 NNPGARVLV 189 (395)
Q Consensus 181 ~g~~~~vLv 189 (395)
.+ .++.++
T Consensus 100 ~~-~~~gla 107 (123)
T PF02803_consen 100 RG-GRYGLA 107 (123)
T ss_dssp HT-TSEEEE
T ss_pred hc-hhhhhH
Confidence 54 455443
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=82.02 E-value=0.79 Score=37.24 Aligned_cols=78 Identities=13% Similarity=0.017 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCC---ccc----cceeeccccchHHHHHHHHH
Q 016094 105 KLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEP---SVN----RLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 105 ~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~---~~~----~~~~i~~~C~s~~~al~~A~ 176 (395)
+-..+++++||+++|++|+|||.|....+.. ...+.-..-+.+.++-.. .+. ....-+..+++++..|..+.
T Consensus 25 ~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~ 104 (119)
T PF02801_consen 25 AALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKAL 104 (119)
T ss_dssp HHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHH
Confidence 3447889999999999999999887544322 222222334444444321 110 02233456778888888888
Q ss_pred HHHHcC
Q 016094 177 DIAENN 182 (395)
Q Consensus 177 ~ll~~g 182 (395)
..++.+
T Consensus 105 l~l~~~ 110 (119)
T PF02801_consen 105 LALEHG 110 (119)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 777766
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=81.73 E-value=4.9 Score=39.31 Aligned_cols=86 Identities=15% Similarity=-0.002 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHc--CCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEW--GQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNR------LMIYSQGCYMGGAVIRH 174 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~a--gi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~------~~~i~~~C~s~~~al~~ 174 (395)
..+...++++++|+++ |++++|||.+++.... ..+-..++++||++..... .-.-+.++++...+|..
T Consensus 257 ~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~ 332 (361)
T cd00831 257 VEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAY 332 (361)
T ss_pred HHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHH
Confidence 4456777899999999 9999999998875532 2344578999999765310 11233455555566665
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 016094 175 AKDIAENNPGARVLVVCC 192 (395)
Q Consensus 175 A~~ll~~g~~~~vLvv~~ 192 (395)
+..-=...+.+++|+++.
T Consensus 333 ~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 333 MEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHhCCCCCCCEEEEEEE
Confidence 543211113578887774
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=81.64 E-value=10 Score=36.48 Aligned_cols=87 Identities=13% Similarity=0.182 Sum_probs=54.7
Q ss_pred CCcchHHH-HHhHHHHHHHhhcccCCCCCCce-EEEEcCC-ChHHH-HHHHHHcCCCcccchHHHHHHHhcCCCCcchHH
Q 016094 270 SKDLPVII-GKYIDKLLADAMSPIGISDWNSL-FYIVHPG-GKVIL-DQVEQNLGLGKEKLGASRYALSEYGNLGAPSVL 345 (395)
Q Consensus 270 ~~~v~~~~-~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~-~~~~~-~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~ 345 (395)
+.+-++.+ .+.+.++++.+|+++|+++ +|| +++.... +..+. ..+++.||+|. +.-+|-|++...-
T Consensus 46 g~~swEkAE~~L~~EA~~~AL~kAGI~~-~DID~i~vGdL~nQ~ipssfvar~LGIP~---------~gV~gACSTg~eA 115 (334)
T PRK12404 46 GQDSYEKAERKLLEEACSRAIEKAKLRK-EDIQFFLAGDLMNQITPTSFAARTLGIPY---------LGLFGACSTSMEG 115 (334)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEecCCCcCcHHHHHHHhCCCc---------cceeecCHHHHHH
Confidence 44445433 3455688999999999997 999 7666332 22222 26778899773 4457777777777
Q ss_pred HHHHHHHhhhhhhhcccCCCCCceEEEEEE
Q 016094 346 FILDDVRKKSTEERKATTGEGLEYGVLFGF 375 (395)
Q Consensus 346 ~~L~~~~~~~~~~g~l~~G~~~d~vll~~~ 375 (395)
+.++..+-+ .|- .|+||.++.
T Consensus 116 L~lAa~~Va--------SG~-Ad~VLavts 136 (334)
T PRK12404 116 LALAALIVN--------SGG-AKYVLTGAS 136 (334)
T ss_pred HHHHHHHHH--------cCC-CCEEEEEeC
Confidence 766655543 231 266666553
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=80.38 E-value=7.2 Score=40.09 Aligned_cols=85 Identities=12% Similarity=0.184 Sum_probs=56.1
Q ss_pred HHHHhHHHHHHHhhcccCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHH
Q 016094 276 IIGKYIDKLLADAMSPIGISDWNSL-FYIVHP----GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDD 350 (395)
Q Consensus 276 ~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~----~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~ 350 (395)
.+...+..+++++|+++|+++ +|| .+|... ..+.+--.+.+++|+..+-... .++-+|++.-+++|+.
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p-~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~af------dLsgmGCSggl~aLdl 247 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKP-KDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSY------NLGGMGCSAGLISIDL 247 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEE------EcccchhhhHHHHHHH
Confidence 345566788999999999997 998 766543 3355666789999997543222 3666777777777765
Q ss_pred HHhhhhhhhcccCCCCCceEEEEE
Q 016094 351 VRKKSTEERKATTGEGLEYGVLFG 374 (395)
Q Consensus 351 ~~~~~~~~g~l~~G~~~d~vll~~ 374 (395)
+..- +. ..++ .++|+++
T Consensus 248 A~~l-L~---a~~~---~~aLVVs 264 (511)
T PLN02192 248 AKHL-LQ---VHPN---SYALVIS 264 (511)
T ss_pred HHHH-HH---cCCC---CeEEEEE
Confidence 5432 10 1233 6667666
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=80.02 E-value=6.9 Score=40.19 Aligned_cols=70 Identities=9% Similarity=0.134 Sum_probs=48.8
Q ss_pred HHHHhHHHHHHHhhcccCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHH
Q 016094 276 IIGKYIDKLLADAMSPIGISDWNSL-FYIVHP----GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDD 350 (395)
Q Consensus 276 ~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~----~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~ 350 (395)
.+...+..+++++|+++|+++ +|| .+|.+- ..+.+--.+.++||+.++-... .++-+|++.-+++|+.
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p-~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~af------dL~gmGCsggl~aL~l 243 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNP-KDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF------NLGGMGCSAGVIAVDL 243 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEE------ecccchhhHHHHHHHH
Confidence 345566778999999999997 999 766632 2356677889999998553332 3555677777777765
Q ss_pred HH
Q 016094 351 VR 352 (395)
Q Consensus 351 ~~ 352 (395)
+.
T Consensus 244 A~ 245 (502)
T PLN02377 244 AK 245 (502)
T ss_pred HH
Confidence 53
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=80.01 E-value=6.4 Score=40.18 Aligned_cols=70 Identities=13% Similarity=0.236 Sum_probs=49.9
Q ss_pred HHHhHHHHHHHhhcccCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHH
Q 016094 277 IGKYIDKLLADAMSPIGISDWNSL-FYIVHP----GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDV 351 (395)
Q Consensus 277 ~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~----~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~ 351 (395)
+...+.++++++|+++|+++ +|| .+|... ..+.+--.+.++||++++-... .++-+|++.-+++|+.+
T Consensus 148 a~~la~~Aa~~aL~~agi~p-~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~f------dL~gmGCSggl~aL~lA 220 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISP-SDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSL------NLGGMGCSAGVIAIDAA 220 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEE------EeccchhhhHHHHHHHH
Confidence 44455678899999999997 998 665433 3345666789999997553333 36668888888888766
Q ss_pred Hh
Q 016094 352 RK 353 (395)
Q Consensus 352 ~~ 353 (395)
..
T Consensus 221 ~~ 222 (478)
T PLN02932 221 KS 222 (478)
T ss_pred HH
Confidence 43
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=80.01 E-value=7.1 Score=38.88 Aligned_cols=87 Identities=14% Similarity=0.017 Sum_probs=56.4
Q ss_pred HHHHhHHHHHHHhhcccCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHH
Q 016094 276 IIGKYIDKLLADAMSPIGISDWNSL-FYIVHP----GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDD 350 (395)
Q Consensus 276 ~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~----~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~ 350 (395)
.+.+...++.+++|+++|+++ +|| ++|... ..+.+--.++++||++++-... -..|++|+.-+..|..
T Consensus 101 ~a~~La~~Aa~~aL~~ag~~~-~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~------~~~~~gC~g~~~aL~~ 173 (393)
T PLN03172 101 EVPKLGKEAAAKAIKEWGQPK-SKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRF------MMYQQGCFAGGTVLRL 173 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEE------eeeCCchHHHHHHHHH
Confidence 344555678899999999997 999 765432 2344555689999998652111 2467888888888876
Q ss_pred HHhhhhhhhcccCCCCCceEEEEEEc
Q 016094 351 VRKKSTEERKATTGEGLEYGVLFGFG 376 (395)
Q Consensus 351 ~~~~~~~~g~l~~G~~~d~vll~~~G 376 (395)
+..- .+ -.++ .+||+++.-
T Consensus 174 A~~~-~~---~~~~---~~vLVV~~E 192 (393)
T PLN03172 174 AKDL-AE---NNAG---SRVLVVCSE 192 (393)
T ss_pred HHHH-HH---cCCC---CeEEEEEEe
Confidence 6543 10 1234 677776643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 395 | ||||
| 3tsy_A | 979 | 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr | 1e-132 | ||
| 1cgz_A | 389 | Chalcone Synthase From Alfalfa Complexed With Resve | 1e-129 | ||
| 1cml_A | 389 | Chalcone Synthase From Alfalfa Complexed With Malon | 1e-128 | ||
| 1jwx_A | 389 | Chalcone Synthase--F215s Mutant Length = 389 | 1e-128 | ||
| 1chw_A | 389 | Chalcone Synthase From Alfalfa Complexed With Hexan | 1e-128 | ||
| 1bi5_A | 389 | Chalcone Synthase From Alfalfa Length = 389 | 1e-128 | ||
| 1bq6_A | 388 | Chalcone Synthase From Alfalfa With Coenzyme A Leng | 1e-128 | ||
| 1i86_A | 389 | Chalcone Synthase, G256a Mutant Length = 389 | 1e-127 | ||
| 3a5q_A | 387 | Benzalacetone Synthase From Rheum Palmatum Length = | 1e-127 | ||
| 3a5s_A | 387 | Benzalacetone Synthase (I207lL208F) Length = 387 | 1e-127 | ||
| 1d6i_A | 388 | Chalcone Synthase (H303q Mutant) Length = 388 | 1e-127 | ||
| 1d6h_A | 387 | Chalone Synthase (N336a Mutant Complexed With Coa) | 1e-127 | ||
| 1i8b_A | 389 | Chalcone Synthase (g256f) Length = 389 | 1e-127 | ||
| 1i88_A | 389 | Chalcone Synthase (G256v) Length = 389 | 1e-127 | ||
| 1i89_A | 389 | Chalcone Synthase (G256l) Length = 389 | 1e-127 | ||
| 1u0v_A | 393 | An Aldol Switch Discovered In Stilbene Synthases Me | 1e-125 | ||
| 1qlv_A | 402 | Pyrone Synthase (Pys) From Gerbera Hybrida Length = | 1e-125 | ||
| 1z1e_A | 390 | Crystal Structure Of Stilbene Synthase From Arachis | 1e-123 | ||
| 3ov2_A | 393 | Curcumin Synthase 1 From Curcuma Longa Length = 393 | 1e-116 | ||
| 3ov3_A | 393 | G211f Mutant Of Curcumin Synthase 1 From Curcuma Lo | 1e-115 | ||
| 1u0u_A | 397 | An Aldol Switch Discovered In Stilbene Synthases Me | 1e-112 | ||
| 1xes_A | 413 | Crystal Structure Of Stilbene Synthase From Pinus S | 1e-111 | ||
| 3awj_A | 402 | Crystal Structure Of The Huperzia Serrata Polyketid | 1e-110 | ||
| 2p0u_A | 413 | Crystal Structure Of Marchantia Polymorpha Stilbene | 1e-105 | ||
| 2d3m_A | 406 | Pentaketide Chromone Synthase Complexed With Coenzy | 1e-102 | ||
| 2d51_A | 406 | Pentaketide Chromone Synthase (M207g Mutant) Length | 1e-102 | ||
| 3ale_A | 416 | A Type Iii Polyketide Synthase That Produces Diaryl | 1e-80 | ||
| 3oit_A | 387 | Crystal Structure Of Curcuminoid Synthase Cus From | 2e-80 | ||
| 2h84_A | 374 | Crystal Structure Of The C-terminal Type Iii Polyke | 9e-40 | ||
| 1ted_A | 393 | Crystal Structure Of A Type Iii Polyketide Synthase | 1e-21 | ||
| 1tee_A | 393 | Crystal Structure Of C205f Mutant Of Pks18 From Myc | 9e-21 | ||
| 3e1h_A | 465 | Crystal Structure Of A Type Iii Polyketide Synthase | 4e-20 | ||
| 3euq_A | 379 | X-Ray Structural Of A Type Iii Pentaketide Synthase | 6e-20 | ||
| 3euo_A | 379 | Crystal Structure Of A Fungal Type Iii Polyketide S | 6e-19 | ||
| 1u0m_A | 382 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 2e-18 | ||
| 3sqz_A | 389 | Crystal Structure Of Hmg_coa Synthase Complexed Wit | 9e-04 |
| >pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 | Back alignment and structure |
|
| >pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 | Back alignment and structure |
|
| >pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 | Back alignment and structure |
|
| >pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389 | Back alignment and structure |
|
| >pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 | Back alignment and structure |
|
| >pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 | Back alignment and structure |
|
| >pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 | Back alignment and structure |
|
| >pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 | Back alignment and structure |
|
| >pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum Length = 387 | Back alignment and structure |
|
| >pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F) Length = 387 | Back alignment and structure |
|
| >pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388 | Back alignment and structure |
|
| >pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387 | Back alignment and structure |
|
| >pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389 | Back alignment and structure |
|
| >pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 | Back alignment and structure |
|
| >pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 | Back alignment and structure |
|
| >pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 | Back alignment and structure |
|
| >pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 | Back alignment and structure |
|
| >pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 | Back alignment and structure |
|
| >pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa Length = 393 | Back alignment and structure |
|
| >pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa Length = 393 | Back alignment and structure |
|
| >pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Specificity Of Type Iii Polyketide Synthases: Pine Stilbene Synthase Structure Length = 397 | Back alignment and structure |
|
| >pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus Sylvestris Length = 413 | Back alignment and structure |
|
| >pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 | Back alignment and structure |
|
| >pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha Stilbenecarboxylate Synthase 2 (Stcs2) Length = 413 | Back alignment and structure |
|
| >pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A Length = 406 | Back alignment and structure |
|
| >pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant) Length = 406 | Back alignment and structure |
|
| >pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 | Back alignment and structure |
|
| >pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 | Back alignment and structure |
|
| >pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks Hybrid From Dictyostelium) Length = 374 | Back alignment and structure |
|
| >pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 | Back alignment and structure |
|
| >pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 | Back alignment and structure |
|
| >pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pksiiinc From Neurospora Crassa Length = 465 | Back alignment and structure |
|
| >pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From Neurospora Crassa Length = 379 | Back alignment and structure |
|
| >pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide Synthase, Oras Length = 379 | Back alignment and structure |
|
| >pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 | Back alignment and structure |
|---|
Score = 669 bits (1728), Expect = 0.0
Identities = 233/386 (60%), Positives = 303/386 (78%), Gaps = 2/386 (0%)
Query: 8 GDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIR 67
+ R++GP A ILAIGTATP +C YQ+DY D++F+VT SEH LK+KF RIC++S I+
Sbjct: 595 RNAQRAKGP-ATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIK 653
Query: 68 KRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITH 127
KRY +LTEE+L+E+PN+ Y APSL+ R ++ EVPKLGKEAALKA+KEWGQP SKITH
Sbjct: 654 KRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITH 713
Query: 128 LIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARV 187
L+F GV+MPGAD +L NLLGLEPSV R+M+Y QGCY GG V+R AKD+AENN GARV
Sbjct: 714 LVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARV 773
Query: 188 LVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM 247
LVVC +ITV+ F P+E LD LVGQA+FGDG+AA I+G+DPD+S+ ERPLFQ++S +Q
Sbjct: 774 LVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISI-ERPLFQLVSAAQT 832
Query: 248 TVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPG 307
+PN+ + G+L+E+G + L ++P +I + ++K L A P+GISDWNSLF+I HPG
Sbjct: 833 FIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPG 892
Query: 308 GKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGL 367
G ILD VE L L K+KL A+R+ LSEYGN+ + VLFILD++RKKS + +ATTGEGL
Sbjct: 893 GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGL 952
Query: 368 EYGVLFGFGPGITVETVVLRSIPIDS 393
++GVLFGFGPG+T+ETVVL SIP+ +
Sbjct: 953 DWGVLFGFGPGLTIETVVLHSIPMVT 978
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 | Back alignment and structure |
|---|
Score = 477 bits (1229), Expect = e-169
Identities = 202/395 (51%), Positives = 286/395 (72%), Gaps = 2/395 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M + + R++GP A I+AIGTATPPN + Q+ +PDF+FRVTNS+ K ELK+KFRR+
Sbjct: 1 MANLHALRREQRAQGP-ATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
CE++ ++KRY +LTEEILKE P + YK S D R +++EE+P+L KEAA KAIKEWG+
Sbjct: 60 CEKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGR 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P S+ITHL+F ++ G+DMPGAD RL LLGL +VNRLMIYSQ C+MG A++R AKD+AE
Sbjct: 120 PKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQ 240
NN GARVLVV C+ITVL F P E + L GQA FGDGA A ++GADP + E+P+++
Sbjct: 180 NNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGI-EKPIYE 238
Query: 241 VLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL 300
+ + Q TV ++ V GHL+ GW + LP II + + L A++P+G+ +WN +
Sbjct: 239 IAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV 298
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
F++ HPG I+D +E L L +KL +R+ +EYGN+ + +V F++D++RK+S E +
Sbjct: 299 FWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGR 358
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDSAN 395
+TTG+GL++GVL GFGPG+++ETVVLRS+P+ +
Sbjct: 359 STTGDGLQWGVLLGFGPGLSIETVVLRSMPLHHHH 393
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 | Back alignment and structure |
|---|
Score = 470 bits (1210), Expect = e-166
Identities = 174/384 (45%), Positives = 244/384 (63%), Gaps = 9/384 (2%)
Query: 11 HRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRY 70
R+ G A +LAIGTA PPNC Q + PDF+FRVTNS+H LK+KF+RIC+ +++RY
Sbjct: 5 QRADGL-AAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRY 63
Query: 71 FYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIF 130
+ TEE+L +P APSLDAR + + VP+L EAA KAI EWG+P + ITHL+
Sbjct: 64 LHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVV 123
Query: 131 GAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVV 190
G +PG D RL+ LLGL PSV R M++ GC+ G A +R AKD+AEN+ GARVLVV
Sbjct: 124 TTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVV 183
Query: 191 CCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250
++T+++F P E L+ Q +FGDGAAA I+GAD D ERPLF+++S +Q +P
Sbjct: 184 AAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDV--ERPLFEIVSAAQTIIP 241
Query: 251 NTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPI----GISDWNSLFYIVHP 306
+++ + E D L + +P +IG +++ L D P+ G WN LF+ VHP
Sbjct: 242 ESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHP 301
Query: 307 GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEG 366
G I+DQV+ LGL KL ASR LS+YGN+ +V+F LD++R++ + A GE
Sbjct: 302 GSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQR--KEAAAAGEW 359
Query: 367 LEYGVLFGFGPGITVETVVLRSIP 390
E GV+ FGPG+TV+ ++L +
Sbjct: 360 PELGVMMAFGPGMTVDAMLLHATS 383
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 | Back alignment and structure |
|---|
Score = 461 bits (1187), Expect = e-162
Identities = 95/393 (24%), Positives = 175/393 (44%), Gaps = 16/393 (4%)
Query: 1 MGTVKSNGDVHRSRGPS---AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKF 57
G G P A I + T TP Q+D D V +E+
Sbjct: 13 AGQRHEVGLAQLPPAPPTTVAVIEGLATGTPRRVVNQSDAADR---VAELFLDPGQRERI 69
Query: 58 RRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKE 117
R+ ++S I R + + L ++ + ++ R + E L + + +A+
Sbjct: 70 PRVYQKSRITTRRMAV--DPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAG 127
Query: 118 WGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKD 177
++I L+ G PG DV ++ LGL PS++R+++ GC + A +
Sbjct: 128 LPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATN 187
Query: 178 IAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERP 237
+P + LVVC ++ ++ ++ +V ++FGDG AA +IGA E
Sbjct: 188 YVRAHPAMKALVVCIELCSVNAVFAD--DINDVVIHSLFGDGCAALVIGASQVQEKLEPG 245
Query: 238 LFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDW 297
V S + NTE+ +V + G LS++LP I + ++ + + G+
Sbjct: 246 KVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQIS 305
Query: 298 NSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTE 357
+ + +HPGG I++Q ++LG+ E S L+ +GN+ + S++F+L+ +
Sbjct: 306 DIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV----- 360
Query: 358 ERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390
++A + + + GV F FGPG+TVE ++ I
Sbjct: 361 -QQAESAKAISTGVAFAFGPGVTVEGMLFDIIR 392
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 | Back alignment and structure |
|---|
Score = 452 bits (1165), Expect = e-159
Identities = 213/394 (54%), Positives = 278/394 (70%), Gaps = 5/394 (1%)
Query: 1 MGTVKSNG--DVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFR 58
MG V G + R+ G A ILAIGTA PPN Q+ YPDF+FR+T +EH ELK+KF+
Sbjct: 21 MGGVDFEGFRKLQRADGF-ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFK 79
Query: 59 RICERSSIRKRYFYLTEEILKENPNMSCY-KAPSLDARHAMLIEEVPKLGKEAALKAIKE 117
RICERS+I++RY YLTEEILK+NP++ + + PSLDAR AML EVP+L KEAA KAI+E
Sbjct: 80 RICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQE 139
Query: 118 WGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKD 177
WGQ S ITHLIF + D+PGAD + LLGL PSV R+ ++ GC+ GG V+R AKD
Sbjct: 140 WGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKD 199
Query: 178 IAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERP 237
+AENN GARVLV+C + T + F P+E LD LVGQA+FGDGA+A I+GADP E+
Sbjct: 200 LAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQ-VEKA 258
Query: 238 LFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDW 297
F+++ +Q VPN+E + G ++E+G + L +P +I I+ + +A S ISDW
Sbjct: 259 CFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDW 318
Query: 298 NSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTE 357
N LF++VHPGG+ ILD+VE L L KL +R+ +SEYGN+ + V FILD RK S +
Sbjct: 319 NKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQ 378
Query: 358 ERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391
+TTGEGLE GVLFGFGPG+T+ETVVL+S+PI
Sbjct: 379 NGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 412
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 | Back alignment and structure |
|---|
Score = 450 bits (1158), Expect = e-158
Identities = 229/382 (59%), Positives = 288/382 (75%), Gaps = 2/382 (0%)
Query: 12 RSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYF 71
+ A ++AIGTA PPNC+YQAD+PDF+FRVTNS+H I LK+KF+R+CE S I KRY
Sbjct: 8 EMKKL-ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYL 66
Query: 72 YLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFG 131
++TEEILKENPN++ Y+A SL+ RH M ++ V +LGKEAALKAIKEWGQP SKITHLI
Sbjct: 67 HVTEEILKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVC 126
Query: 132 AVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVC 191
+ GVDMPGAD +L LL L+PSV R M Y GCY GG V+R AKDIAENN GARVL+VC
Sbjct: 127 CLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVC 186
Query: 192 CDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPN 251
++T F P+E LD ++GQAI GDGAAA I+GADPD++ ERP+F+++S +Q VP
Sbjct: 187 SEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLT-VERPIFELVSTAQTIVPE 245
Query: 252 TENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKVI 311
+ + GHL E G + L K +P +I I L+DA +P+ ISDWNSLF+I HPGG I
Sbjct: 246 SHGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAI 305
Query: 312 LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGV 371
LDQV +GL KEKL +R L +YGN+ + +V FI+D++RKKS E +ATTGEGLE+GV
Sbjct: 306 LDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGV 365
Query: 372 LFGFGPGITVETVVLRSIPIDS 393
LFGFGPGITVETVVLRS+P+ S
Sbjct: 366 LFGFGPGITVETVVLRSVPVIS 387
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 | Back alignment and structure |
|---|
Score = 443 bits (1141), Expect = e-156
Identities = 91/377 (24%), Positives = 151/377 (40%), Gaps = 26/377 (6%)
Query: 11 HRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRY 70
H G A + + P + + + R ++ R+ E + +R R+
Sbjct: 3 HGGSGFMATLCRPSVSVPEHVITMEETLELARRRHTDHPQLP---LALRLIENTGVRTRH 59
Query: 71 FYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIF 130
E E+P + R+ + E +A+ + + I +I+
Sbjct: 60 IVQPIEDTLEHP--------GFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIY 111
Query: 131 GAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVV 190
+ G MP L+N +G + + ++ I GC GGA I A D P A L+V
Sbjct: 112 VSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIV 171
Query: 191 CCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250
C+ L + PT+ + L+ +FGDG AAA++ ++ +P
Sbjct: 172 ACEFCSLCYQ-PTDLGVGSLLCNGLFGDGIAAAVVRGRGG------TGVRLERNGSYLIP 224
Query: 251 NTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKV 310
TE+ ++ +K G+ + L K +P + + L + G + FYIVH GG
Sbjct: 225 KTEDWIMYDVKATGFHFLLDKRVPATMEP-LAPALKELAGEHGWDASDLDFYIVHAGGPR 283
Query: 311 ILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYG 370
ILD + L + SR L+EYGN+ + VL L + +E G G
Sbjct: 284 ILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF----DEGGVEEG---ARG 336
Query: 371 VLFGFGPGITVETVVLR 387
+L GFGPGIT E +
Sbjct: 337 LLAGFGPGITAEMSLGC 353
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 | Back alignment and structure |
|---|
Score = 436 bits (1122), Expect = e-153
Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 23/383 (6%)
Query: 12 RSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYF 71
+S + +L IG + P Q D K E EK +RI E+S I+ R+
Sbjct: 9 KSNNN-SFVLGIGISVPGEPISQQSLKDSISNDF--SDKAETNEKVKRIFEQSQIKTRH- 64
Query: 72 YLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFG 131
L + K ++ ++ + + VP L ++A L+A+K+WG ITH++
Sbjct: 65 -LVRDYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSV 123
Query: 132 AVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVC 191
G+ +P + +L++LLGL V R+ + GC G + +R A +A+ +P R+LVVC
Sbjct: 124 TSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVC 183
Query: 192 CDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPN 251
++ LHF D +V +IF DG+AA IIG +P + E PL++V+ + PN
Sbjct: 184 TEVCSLHFSNTDG--GDQMVASSIFADGSAAYIIGCNP--RIEETPLYEVMCSINRSFPN 239
Query: 252 TENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNS-----LFYIVHP 306
TEN +V L++ GW+ L +P++IG I+ + + + + +++H
Sbjct: 240 TENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFLIHT 299
Query: 307 GGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEG 366
GGK IL +E +LG+ ++ + YGN+ + SV+F++D RK
Sbjct: 300 GGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKS---------KSL 350
Query: 367 LEYGVLFGFGPGITVETVVLRSI 389
Y + FGPG+ E L+++
Sbjct: 351 PTYSISLAFGPGLAFEGCFLKNV 373
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 | Back alignment and structure |
|---|
Score = 392 bits (1007), Expect = e-134
Identities = 90/394 (22%), Positives = 162/394 (41%), Gaps = 21/394 (5%)
Query: 14 RGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYL 73
I +G PP + +K I + I +R
Sbjct: 28 GELGLSITGLGVQYPPYSLGPDAIDILS---KRYHPESPAMKKVLAINRYTGIDQRSSIG 84
Query: 74 TEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAV 133
+ +P ++ P++ H + + + L EA+ KA+ E ++ITH++
Sbjct: 85 NPD----HPLVNKPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTC 140
Query: 134 YGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA----ENNPGARVLV 189
PG D + LGL + +++++ GC G A +R A ++ AR+LV
Sbjct: 141 TDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILV 200
Query: 190 VCCDITVLHFHEPTE---ARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ 246
+ +++ E A + +G A+F D A+A I+ + + ++ +L
Sbjct: 201 LALEVSTTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWEN 260
Query: 247 MTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMS------PIGISDWNSL 300
+P++E+++ + MGW LS +PV+ + AD +S P
Sbjct: 261 RVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADF 320
Query: 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360
+ +HPGG IL E +GL E + AS +GN + ++ +L+ +R+K +
Sbjct: 321 DWAMHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKD-MDAL 379
Query: 361 ATTGEGLEYGVLFGFGPGITVETVVLRSIPIDSA 394
A G+ EY V FGPGI VE +L+ A
Sbjct: 380 APGGKVKEYVVGCAFGPGINVEMCMLKRRMNAPA 413
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 | Back alignment and structure |
|---|
Score = 387 bits (996), Expect = e-133
Identities = 73/407 (17%), Positives = 130/407 (31%), Gaps = 48/407 (11%)
Query: 12 RSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYF 71
+ A + A + + + R + + I + I R +
Sbjct: 22 SNAMA-AYLCAPAVIHGEHSVETREIVE-EVRGRHPHAP--WAPRIDGIAASTGIESRGW 77
Query: 72 YLTEEILKENPN----------------------------MSCYKAPSLDARHAMLIEEV 103
L E + + ++ R A E V
Sbjct: 78 MLPLEAAVAPGGGGDLGAAREALVRDGFTEQDANRAIAALKAVPASQTVQERTAPAWEAV 137
Query: 104 PKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQ 163
G+ AA A++ G V+ + LI +PG DV L N L L L
Sbjct: 138 QAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPATQW 197
Query: 164 GCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAA 223
C G + A D+ +P VLVV + + P + L+ L+ + +F D A AA
Sbjct: 198 ACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQ-PADDTLESLIVRLLFADTAVAA 256
Query: 224 IIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDK 283
++ P + ++ + T+P T + + G + + + P + + +
Sbjct: 257 VVTGRPR----PESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTA 312
Query: 284 LLAD--AMSPIGISDWNSLFYIVHPGGKVILDQVEQNLGLG-KEKLGASRYALSEYGNLG 340
+ S W+ + HPGG +L+ +EQ + L + GN G
Sbjct: 313 MWEWLRVRYEDDPSSWHPDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYTSGNRG 372
Query: 341 APSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387
+V IL + VL+ PG+T +
Sbjct: 373 GAAVFDILRRAHDAGQKTG--------SRAVLYAAAPGLTATALEGE 411
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 2e-11
Identities = 58/302 (19%), Positives = 93/302 (30%), Gaps = 58/302 (19%)
Query: 106 LGKEAALKAIKEWGQPVSKITHLIFGAVYGVDM-PGADVRLMNLLGLEPSVNRLMIYSQG 164
+G AA I + KI +I VD A V++ NLLG++P R +
Sbjct: 54 MGANAAKDIITDED--KKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFA-RCFEMKEA 110
Query: 165 CYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAI 224
CY I+ AKD P +VLV+ D + E G GA A +
Sbjct: 111 CYAATPAIQLAKDYLATRPNEKVLVIATDTARYGLNSGGE---------PTQGAGAVAMV 161
Query: 225 IGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKL 284
I +P + + + +V + G Y P++ G
Sbjct: 162 IAHNPSIL-----ALNEDAVAYTE------DVYDFWRPTGHKY------PLVDGALSKDA 204
Query: 285 LADAMSPI----------GISDWNSLFYIVH-PGGKVILDQVEQNLGLG--------KEK 325
+ ++D+ H P K+ +E + +
Sbjct: 205 YIRSFQQSWNEYAKRQGKSLADFA--SLCFHVPFTKMGKKALESIIDNADETTQERLRSG 262
Query: 326 LGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVV 385
+ GN+ S+ L + E R GE + LF +G G E
Sbjct: 263 YEDAVDYNRYVGNIYTGSLYLSLISLL----ENRDLQAGETI---GLFSYGSGSVGEFYS 315
Query: 386 LR 387
Sbjct: 316 AT 317
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 | Back alignment and structure |
|---|
Score = 62.3 bits (151), Expect = 7e-11
Identities = 53/300 (17%), Positives = 98/300 (32%), Gaps = 53/300 (17%)
Query: 101 EEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDM-PGADVRLMNLLGLEPSVNRLM 159
+++ AA + + I +I G +D A V L L+G++P R
Sbjct: 54 QDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFA-RSF 110
Query: 160 IYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDG 219
+ Y A ++ AK+ +P +VLVV DI + E G G
Sbjct: 111 EIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYGLNSGGEP---------TQGAG 161
Query: 220 AAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGK 279
A A ++ ++P + + + ++ + G Y P++ G
Sbjct: 162 AVAMLVSSEPRIL-----ALKEDNVMLTQ------DIYDFWRPTGHPY------PMVDGP 204
Query: 280 YIDKLLADAMS----------PIGISDWNSLFY-------IVHPGGKVILDQVEQNLGLG 322
++ + + + +D+++L + I DQ E
Sbjct: 205 LSNETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERI 264
Query: 323 KEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVE 382
+ S GNL S+ L + + T G + LF +G G E
Sbjct: 265 LARYEESIIYSRRVGNLYTGSLYLGLISLLE---NATTLTAGNQI---GLFSYGSGAVAE 318
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 3e-08
Identities = 53/412 (12%), Positives = 108/412 (26%), Gaps = 114/412 (27%)
Query: 14 RGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYL 73
R + + + PP L + + I
Sbjct: 2 RWENLFVSGVAAWLPPL------------STAQDAVMAGLLD--PARSKLRGIESVT--- 44
Query: 74 TEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAV 133
+ + + P++ AA A+ + ++ ++ ++
Sbjct: 45 ---VASDAEE-----------------DAPPRMAARAARAALGRGDVDPADVSLVLHSSL 84
Query: 134 Y--GVDMPGADVRLMNLLGLEPS----VNRLMIYSQGC----Y---MGGAVIRHAKDIAE 180
+ G+D+ A + + + Q C + GA +
Sbjct: 85 WFQGIDLWPAASYVAHEAVGRHVPAFGLA------QRCNGGMGAIELAGAYLGSGIGAGH 138
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDM-----LVGQAIFGDGAAAAIIGADPD----- 230
+L F P +D + ++GDGAAA ++
Sbjct: 139 AA----LLTTGDR-----FAGPR---IDRWNSVDVT---MYGDGAAALVLSTRDGFARVL 183
Query: 231 ----VSLNERPLFQVLSCSQMTVPNTENNVV--GHLKEMGWDY----TLSKDLPVIIGKY 280
N + P + V G G + L+ ++
Sbjct: 184 STATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAA 243
Query: 281 IDKLLADAMSPIGIS----DWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSE- 335
+ L DA G + ++ + ++ LGL E+ +
Sbjct: 244 KTQALEDA----GTAIEDIAH----AVIPVSRRGTGHELHDLLGLPDERTSWA---YGRT 292
Query: 336 YGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387
G++GA L + E G+ + +LFG G G T V+
Sbjct: 293 TGHVGAGDQYAGLAHLV----ENALVQPGDRV---LLFGGGAGYTCTAAVVE 337
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 1e-05
Identities = 39/221 (17%), Positives = 59/221 (26%), Gaps = 59/221 (26%)
Query: 20 ILAIGTATPPNCFYQADYPDFFFRVTNSEHKIE--LKEKFRRICERSSIRKRYFYLTEEI 77
I+A+ P QA + K L + C
Sbjct: 27 IVALEIYFPSQYVDQA---ELEKYDGVDAGKYTIGLGQAKMGFCTDR------------- 70
Query: 78 LKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD 137
E++ L ++ I L G +D
Sbjct: 71 -----------------------EDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIID 107
Query: 138 M-PGADVRLMNLLGLEPSVNRLMI-YSQGCYMGGAVIRHAKDIAENNP--GARVLVVCCD 193
LM L + + I + CY G A + +A + E++ G LVV D
Sbjct: 108 KSKSVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGD 167
Query: 194 ITV--LHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVS 232
I V PT G GA A +IG + +
Sbjct: 168 IAVYATGNARPT------------GGVGAVALLIGPNAPLI 196
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 60/410 (14%), Positives = 114/410 (27%), Gaps = 116/410 (28%)
Query: 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIE---------LKEKFRRICERSSIR 67
+ I + P+ +T+ E I L K + + + I
Sbjct: 12 NVSIAGLAHIDAPH------------TLTSKE--INERLQPTYDRLGIKTDVLGDVAGIH 57
Query: 68 KRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITH 127
R + ++ + +AA KA+ + + KI
Sbjct: 58 ARR------LWDQD-------------------VQASDAATQAARKALIDANIGIEKIGL 92
Query: 128 LIFGAVYGVDM--PGADVRLMNLLGLEPSVNRLM-----------IYSQGCYMGGAVIR- 173
LI +V D P + LG+ + M I G + ++
Sbjct: 93 LINTSVSR-DYLEPSTASIVSGNLGV---SDHCMTFDVANACLAFIN--GMDIAARMLER 146
Query: 174 -HAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQA----------IFGDGAAA 222
LVV + T +E T R+ G GAAA
Sbjct: 147 GEID---------YALVVDGE-TANLVYEKTLERMTSPDVTEEEFRNELAALTLGCGAAA 196
Query: 223 AIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDL----PVIIG 278
++ V + P ++ T N ++ L +
Sbjct: 197 MVMARSELVP--DAPRYKGGVTRSATEWNKLCRGNLDRMVTD-----TRLLLIEGIKLAQ 249
Query: 279 KYIDKLLADA-MSPIGISDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYG 337
K + + D +++H + ++ G+ K+ E+G
Sbjct: 250 KTFVAAKQVLGWAVEEL-DQ----FVIHQVSRPHTAAFVKSFGIDPAKVMTI---FGEHG 301
Query: 338 NLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387
N+G SV +L ++ E + G+ + L G G G+ +
Sbjct: 302 NIGPASVPIVLSKLK----ELGRLKKGDRI---ALLGIGSGLNCSMAEVV 344
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 70/419 (16%), Positives = 126/419 (30%), Gaps = 100/419 (23%)
Query: 17 SAKILAIGTATPPN-------CFYQADYPDFFFRVTNSEHKIELKEKFRR-----ICERS 64
A I A G TPP+ Y F + + E + I + S
Sbjct: 24 PAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKAS 83
Query: 65 SIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSK 124
I+ RY + K P + R + + ++ AA +AI+ WG+P +
Sbjct: 84 GIKSRYV-----VAKPGIVDPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRER 138
Query: 125 ITHLIFGAVYGVDM--PGADVRLMNLLGLEP-----SVNRLMIYSQGCYMGGAV--IRHA 175
I ++ P + + N LGL +V C A ++ A
Sbjct: 139 IGAVLCACSNM-QRAYPAMAIEVQNALGLGGFAFDMNV--------AC--SSATFGLKTA 187
Query: 176 KDIAENNPGARVLVVCCDIT--VL-------HFHEPTEARLDMLVGQAIFGDGAAAAIIG 226
D VL+V +I L HF IFGD A AAI+
Sbjct: 188 ADFVGGGSVDAVLMVNPEICSGHLNFRDRDSHF---------------IFGDVATAAIVE 232
Query: 227 ADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVI---------- 276
D + + +L T + W K +
Sbjct: 233 RADD----AQGGWSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKE 288
Query: 277 ----IGKYIDKLLADA-MSPIGISDWNSLFYIVHPGGKVILDQVEQNL---GLGKEKLGA 328
+ + I + + + P G+ +H + + + + + +++
Sbjct: 289 VVPLVSEMIIEHAREIGIDPHGL-KR----MWLHQANINMNEIIGRKVLGRDPTRDENVI 343
Query: 329 SRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387
L +Y N + + + G + G++ FG G + TV ++
Sbjct: 344 I---LDDYANTSSAGSIIAFHK------HQDDMAQG---DLGLICSFGAGYSAGTVFVQ 390
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 3e-04
Identities = 45/376 (11%), Positives = 95/376 (25%), Gaps = 138/376 (36%)
Query: 34 QADYPDFFFRVTNSEHKIELKEKFRRIC-ERSSIRKRYFYLTEEILKENPNMSCYKAPSL 92
+ +Y F L + + S + + Y + + +N + Y L
Sbjct: 88 RINYK---F----------LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 93 DARHAMLIEEVPKL--------------GKEA-ALKAIKEWGQPVSKITHLIFGAVYGVD 137
L + + +L GK AL K+ + ++ ++
Sbjct: 135 QPYLK-LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS-----YKVQCKMDFKIFWLN 188
Query: 138 M-----PGADVRLMNLL-----------------------GLEPSVNRLMIYSQG--CYM 167
+ P + ++ L ++ + RL+ C +
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 168 GGAVIRHAKD--IAEN-NPGARVLVVCCDITVLHF-------H----------EPTEAR- 206
V+ + ++ N ++L+ V F H P E +
Sbjct: 249 ---VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 207 -----LDMLVG----QAIFGDGAAAAIIGA----DP------------------DVSLNE 235
LD + + + +II + SLN
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 236 ------RPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAM 289
R +F LS + L + W + D+ V++ K L +
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPT-----ILLSLIWFDVIKSDVMVVVNKLHKYSLVE-- 418
Query: 290 SPIGISDWNSLFYIVH 305
+
Sbjct: 419 -----KQPKESTISIP 429
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 395 | |||
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 100.0 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 100.0 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 100.0 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 100.0 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 100.0 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 100.0 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 100.0 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 100.0 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 100.0 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 100.0 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 100.0 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 100.0 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 100.0 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 100.0 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 100.0 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 100.0 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 100.0 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 100.0 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 100.0 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 100.0 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 100.0 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 100.0 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 100.0 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 100.0 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 100.0 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 100.0 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 100.0 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 100.0 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 100.0 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 100.0 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 100.0 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 100.0 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 100.0 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.95 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.88 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.87 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.87 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 99.87 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.87 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 99.86 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 99.86 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 99.85 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 99.84 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.83 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.83 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 99.83 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.82 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 99.82 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.81 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.81 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.8 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.8 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 99.79 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 99.79 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 99.79 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.78 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.77 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.76 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.76 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.76 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 99.76 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 99.75 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 99.74 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.72 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.7 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.7 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.68 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.43 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.43 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.22 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.88 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.87 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.85 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 93.47 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 93.05 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 93.01 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 93.01 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 92.81 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 92.74 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 92.46 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 92.43 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 92.38 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 92.33 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 92.31 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 92.17 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 92.09 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 91.91 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 91.51 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 89.23 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 88.87 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 88.38 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 87.77 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 86.5 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 85.55 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 85.52 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 84.77 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 83.54 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 82.9 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 81.93 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 81.32 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 81.21 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 81.12 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 80.6 |
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-67 Score=515.97 Aligned_cols=382 Identities=53% Similarity=0.975 Sum_probs=340.4
Q ss_pred CcccCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCC
Q 016094 8 GDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCY 87 (395)
Q Consensus 8 ~~~~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~ 87 (395)
..-||+.++ ++|.++|+|+|+++++|+|+.+.++++++++..++++++.++|++++||++||++.+.++++.+|++.++
T Consensus 8 ~~~~~~~~~-~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~ 86 (393)
T 3ov2_A 8 RREQRAQGP-ATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLHLTEEILKERPKLCSY 86 (393)
T ss_dssp HHHHSCSSC-CEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSS
T ss_pred ccccCCCCC-eEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEeecChhhhccCcccccC
Confidence 345899999 9999999999999999999999876665544445677788899999999999999988877778888889
Q ss_pred CCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccch
Q 016094 88 KAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYM 167 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s 167 (395)
..|++++|++.|.+...+|+++|+++||+++|+++++||+||+++++++..|+++.+|+++||+++.+.++++++++|+|
T Consensus 87 ~~p~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g 166 (393)
T 3ov2_A 87 KEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHM 166 (393)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEESCCTTH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEcCccHH
Confidence 99999999999999999999999999999999999999999999999977899999999999999765336899999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecce
Q 016094 168 GGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM 247 (395)
Q Consensus 168 ~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~ 247 (395)
++.||.+|.++|++|+.++||||++|.+|.++.+|.|++++++.+..+|||||+|+||++++..++ ..+.+++...++.
T Consensus 167 ~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~-~~~~~~~~~~~~~ 245 (393)
T 3ov2_A 167 GAAMLRIAKDLAENNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGI-EKPIYEIAAAMQE 245 (393)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTT-CCCSEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCCCcc-cCceeEEEecCcE
Confidence 999999999999999999999999999986577777655566678899999999999998765432 2235788877777
Q ss_pred ecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCceEEEEcCCChHHHHHHHHHcCCCcccch
Q 016094 248 TVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLG 327 (395)
Q Consensus 248 ~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di~~i~H~~~~~~~~~i~~~lgi~~ek~~ 327 (395)
.+|.+.+.+.|.+.+.|+.+.+++++|+++.+.++++++++|+++|++.++|++|++||+|.++++.++++||++++|++
T Consensus 246 ~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~v~Hq~n~~i~~~v~~~Lgl~~ek~~ 325 (393)
T 3ov2_A 246 TVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFWVAHPGNWAIIDAIEAKLQLSPDKLS 325 (393)
T ss_dssp ECTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGSEEEECCCCHHHHHHHHHHHTCCTTTTH
T ss_pred EecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCcEEEECCCChHHHHHHHHHcCCCHHHHH
Confidence 88998888889888888888889999999999999999999999999942666999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 328 ASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 328 ~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
.+|+++++||||+|||+|++|++++++..++|++++|.+.|+|++++||+|++|++++|||.+.
T Consensus 326 ~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 389 (393)
T 3ov2_A 326 TARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMPL 389 (393)
T ss_dssp HHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEccc
Confidence 9899999999999999999999999864445889888555899999999999999999999865
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-64 Score=497.88 Aligned_cols=374 Identities=46% Similarity=0.821 Sum_probs=326.2
Q ss_pred cccCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCC
Q 016094 9 DVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYK 88 (395)
Q Consensus 9 ~~~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 88 (395)
.-||++++ ++|.++|+|+|+++++|+|+.+.+++.+++++.++++++.+||++++||++||++.++++++.+|+++.++
T Consensus 3 ~~~~~~~~-~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~ 81 (387)
T 3oit_A 3 RSQRADGL-AAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFVDRD 81 (387)
T ss_dssp CCCCCSSC-CEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCEEEESCCHHHHHHCGGGTCTT
T ss_pred cccCCCCC-eEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcceeeeecCHHHhccCccccccC
Confidence 34899999 99999999999999999999999865555554467778889999999999999999988777788888899
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 016094 89 APSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMG 168 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~ 168 (395)
.|++++|++.|.+...+|+++|+++||+++|++++|||+||+++++++..|+.+.+|+++||+++.+.++++++++|+|+
T Consensus 82 ~p~~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~ 161 (387)
T 3oit_A 82 APSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAG 161 (387)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEECCGGGHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEECchhHHH
Confidence 99999999999999999999999999999999999999999999999778999999999999997653368999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeccee
Q 016094 169 GAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMT 248 (395)
Q Consensus 169 ~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~ 248 (395)
+.||.+|.++|++|+.++||||++|.+|.+|.+|.|.+++++.+..+|||||+|+||++++.. . ..+.+++.+.++..
T Consensus 162 ~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~-~-~~~~~~~~~~~~~~ 239 (387)
T 3oit_A 162 CAALRLAKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADD-V-ERPLFEIVSAAQTI 239 (387)
T ss_dssp HHHHHHHHHHHHSSTTCEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCCS-S-CCCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCCc-c-cCCceEEEecccEE
Confidence 999999999999999999999999999865777776555667788999999999999987632 1 22457888877778
Q ss_pred cCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhccc----CCCCCCceEEEEcCCChHHHHHHHHHcCCCcc
Q 016094 249 VPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPI----GISDWNSLFYIVHPGGKVILDQVEQNLGLGKE 324 (395)
Q Consensus 249 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~----g~~~~~di~~i~H~~~~~~~~~i~~~lgi~~e 324 (395)
.|.+.+.+.|.+.+.|+.|.+++++|+++.+.++++++++|+++ |++.++|++|++||+|.++++.++++||++++
T Consensus 240 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~d~d~~~~v~Hq~n~~il~~v~~~Lgl~~e 319 (387)
T 3oit_A 240 IPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMDQVDAALGLEPG 319 (387)
T ss_dssp CTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC------GGGSEEEECCCCHHHHHHHHHHHTCCTT
T ss_pred eCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccEEEECCCCHHHHHHHHHHcCCCHH
Confidence 89998888898888898888899999999999999999999999 98732667999999999999999999999999
Q ss_pred cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCC---CCceEEEEEEcccceeeeeeEEecc
Q 016094 325 KLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGE---GLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 325 k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~---~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
|+..+|+++++||||+|||+|++|++++++ ++++|+ +.|+|++++||+|++|++++||+.+
T Consensus 320 k~~~s~~~l~~~GNtssAsip~~L~~~~~~-----~~~~G~~g~~~d~vll~~fG~G~t~~~~ll~~~~ 383 (387)
T 3oit_A 320 KLAASRRVLSDYGNMSGATVIFALDELRRQ-----RKEAAAAGEWPELGVMMAFGPGMTVDAMLLHATS 383 (387)
T ss_dssp TTHHHHHHHHHHCBCGGGHHHHHHHHHHHC---------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred HHHHHHHHHHHhCchHHhHHHHHHHHHHHh-----hhccCCCCCCCCEEEEEEecccceeeeeeeEecc
Confidence 999989999999999999999999998764 244441 1279999999999999999999865
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-59 Score=463.44 Aligned_cols=379 Identities=55% Similarity=0.932 Sum_probs=318.4
Q ss_pred ccCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCC
Q 016094 10 VHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKA 89 (395)
Q Consensus 10 ~~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~ 89 (395)
-||.+++ ++|.++|+|+|+++++|+++.+.+....+++..+++.++.+||.+++||++||++.+++.+...|++..+..
T Consensus 32 ~~~~~~~-~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~ 110 (413)
T 1xes_A 32 LQRADGF-ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVE 110 (413)
T ss_dssp HHSCCSC-EEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHHHSSSS
T ss_pred cccCCCC-eEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCcccccccc
Confidence 4788888 999999999999999999999887443322223455556789999999999999987765555555555555
Q ss_pred -CCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 016094 90 -PSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMG 168 (395)
Q Consensus 90 -~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~ 168 (395)
|++++|++.|.+...+|+.+|+++||+++|+++++||+||+++++++..|+.+.+|+.+||+++.+.++++++++|+|+
T Consensus 111 ~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~ 190 (413)
T 1xes_A 111 VPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAG 190 (413)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEESCCTTHH
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceecCccHHH
Confidence 8899999999999999999999999999999999999999999988778899999999999987531268899999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeccee
Q 016094 169 GAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMT 248 (395)
Q Consensus 169 ~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~ 248 (395)
+.||.+|.++|++|.+++|||+++|.++..|.+|.+.+++++...++|||||+|+||++.+..++ ..+.+++.+.+...
T Consensus 191 ~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~-~~~~~~l~~~~~~~ 269 (413)
T 1xes_A 191 GTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQV-EKACFEIVWTAQTV 269 (413)
T ss_dssp HHHHHHHHHHHHTSTTCCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTT-SCCSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCCccc-cCCceEEEeeeeEE
Confidence 99999999999999999999999999987566665433445567899999999999998765332 11247788777667
Q ss_pred cCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCC-CCCceEEEEcCCChHHHHHHHHHcCCCcccch
Q 016094 249 VPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGIS-DWNSLFYIVHPGGKVILDQVEQNLGLGKEKLG 327 (395)
Q Consensus 249 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~-~~~di~~i~H~~~~~~~~~i~~~lgi~~ek~~ 327 (395)
+|.+...+.|.+.+.|+.+.+++++|+++.+.++++++++|+++|++ . +|++|++||+|.++++.+++.||+++||++
T Consensus 270 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~-~di~~v~Hq~~~~i~~~~~~~Lgl~~ek~~ 348 (413)
T 1xes_A 270 VPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDW-NKLFWVVHPGGRAILDRVEAKLNLDPTKLI 348 (413)
T ss_dssp CTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCG-GGSEEEECCSCHHHHHHHHHHTTCCTTTTH
T ss_pred cCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCc-cceeEEECCCCHHHHHHHHHHcCCChHHhH
Confidence 88887777777777777788899999999999999999999999998 5 788899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 328 ASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 328 ~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
.+|+++++||||++||+|++|++++++..+.|.+.+|+|.|+||+++||+|++|++++|||.+.
T Consensus 349 ~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 412 (413)
T 1xes_A 349 PTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 412 (413)
T ss_dssp HHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHHHHHhcCcCchhhHHHHHHHHHHhccccCCCCCCCCcceEEEEEecCCcEEeEEEEEeccC
Confidence 8777899999999999999999999882111223333434899999999999999999999853
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-58 Score=457.27 Aligned_cols=376 Identities=60% Similarity=1.030 Sum_probs=314.6
Q ss_pred CCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCH
Q 016094 13 SRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSL 92 (395)
Q Consensus 13 ~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 92 (395)
+.++ ++|.++|+|+|+++++|+++.+.+....+++..+++.++.+||.+++||++||++.+++.+...|++.++..|++
T Consensus 9 m~~~-~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~ 87 (387)
T 3a5r_A 9 MKKL-ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIAAYEATSL 87 (387)
T ss_dssp --CC-EEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECSCCHHHHHHCHHHHSSSSSCH
T ss_pred cCCC-cEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEecChhhhccCcccccccCCCH
Confidence 3445 899999999999999999999886433322223455556789999999999999987765555565566678999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHH
Q 016094 93 DARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVI 172 (395)
Q Consensus 93 ~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al 172 (395)
++|+..+.+...+|+.+|+++||+++|+++++||+||+++++++..|+.+.+|+++||+++.+.++++++++|+|++.||
T Consensus 88 ~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al 167 (387)
T 3a5r_A 88 NVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVL 167 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHH
Confidence 99999999999999999999999999999999999999999887789999999999999876412688999999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCC
Q 016094 173 RHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNT 252 (395)
Q Consensus 173 ~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~ 252 (395)
.+|.++|++|.+++|||+++|.++..|.+|.+.+++++...++|||||+|+||++.+..++ ..+.+++.+.+....|.+
T Consensus 168 ~~A~~~i~~g~~~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~~~-~~~~~~l~~~~~~~~p~~ 246 (387)
T 3a5r_A 168 RLAKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTV-ERPIFELVSTAQTIVPES 246 (387)
T ss_dssp HHHHHHHHHSTTCEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCCTTT-CCCCEEEEEEEEEECTTC
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCCccc-cCCceEEEeeeEEEeCCC
Confidence 9999999999999999999999987566665433334557899999999999998765332 112477877777778887
Q ss_pred CCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCC-CCCceEEEEcCCChHHHHHHHHHcCCCcccchHHHH
Q 016094 253 ENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGIS-DWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRY 331 (395)
Q Consensus 253 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~-~~~di~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~ 331 (395)
.+.+.|.+.+.|+.+++++++|+++.+.++++++++|+++|++ . ++++|++||+|.++++.+++.||++++|++.+|+
T Consensus 247 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~-~di~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~ 325 (387)
T 3a5r_A 247 HGAIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDW-NSLFWIAHPGGPAILDQVTAKVGLEKEKLKVTRQ 325 (387)
T ss_dssp TTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCG-GGSEEEECCSCHHHHHHHHHHHTCCGGGGHHHHH
T ss_pred hHhcCceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCCh-hheeEEECCCCHHHHHHHHHHcCCChHHhHHHHH
Confidence 7777787777777788899999999999999999999999998 5 7788999999999999999999999999998777
Q ss_pred HHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 332 ALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 332 ~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
++++||||++||+|++|++++++..+.|.+.+|++.|+|++++||+|++|++++|||.+.
T Consensus 326 ~l~~~GNtssAsi~~~L~~~~~~g~~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 385 (387)
T 3a5r_A 326 VLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGPGITVETVVLRSVPV 385 (387)
T ss_dssp HHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHhcCCcchhHHHHHHHHHHHhccccCCCCCCCCcceEEEEEecCcceeeehhheeccc
Confidence 899999999999999999999982111223333334899999999999999999999864
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-58 Score=451.36 Aligned_cols=322 Identities=21% Similarity=0.245 Sum_probs=268.4
Q ss_pred ccCCCCCc-eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCC
Q 016094 10 VHRSRGPS-AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYK 88 (395)
Q Consensus 10 ~~~~~~~~-v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 88 (395)
+++.++|. .+|.|+|+|+|+++++|+|+.+.+ ..+ .+||.+++||++||++.++|+
T Consensus 5 ~~~~~~~~~srI~g~g~ylP~~~v~n~el~~~~---~~~---------~e~I~~rtGI~~R~~a~~~e~----------- 61 (350)
T 4ewp_A 5 LKQHERPAASRIVAVGAYRPANLVPNEDLIGPI---DSS---------DEWIRQRTGIVTRQRATAEET----------- 61 (350)
T ss_dssp CCCCCCCSEEEEEEEEEECCSCEEEHHHHTTTT---TCC---------HHHHHHHHCCSEEECCCSSCC-----------
T ss_pred cccccCCCCCEEEEEEEEcCCCeEcHHHHHHHh---CCC---------HHHHHhccCceEEEEcCCCCC-----------
Confidence 45566663 579999999999999999998764 222 379999999999999987774
Q ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccch
Q 016094 89 APSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYM 167 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s 167 (395)
..+|+++|+++||+++|++|+|||+||++|+++ +..|+++.+|+++||+++.+ +++++++|+|
T Consensus 62 --------------~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~--a~di~~~C~g 125 (350)
T 4ewp_A 62 --------------VPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAP--AYDVSAACAG 125 (350)
T ss_dssp --------------HHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSC--EEEEECGGGH
T ss_pred --------------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCce--EEEeecchhh
Confidence 899999999999999999999999999999999 78999999999999998876 8999999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecce
Q 016094 168 GGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM 247 (395)
Q Consensus 168 ~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~ 247 (395)
++.||.+|.+++++|+.++||||++|.+|. +.++.+ +.+.++|||||+|+||++.+..++ ..+.+..++..
T Consensus 126 ~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~-~~d~~~-----~~~~~lfgDGA~A~vl~~~~~~~~---~~~~~~sdg~~ 196 (350)
T 4ewp_A 126 YCYGVAQADALVRSGTARHVLVVGVERLSD-VVDPTD-----RSISFLLGDGAGAVIVAASDEPGI---SPSVWGSDGER 196 (350)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTC-----TTTGGGBCEEEEEEEEEEESSCCB---CCCEEEECGGG
T ss_pred HHHHHHHhhhhhhCCCccceeEeeeeecee-cccccc-----cccccccccchheeeeecccCCCc---cceeeeecccc
Confidence 999999999999999999999999999997 445543 346789999999999998776542 12223222211
Q ss_pred ----ecCCCC--------------CceeeeEecCc--eeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEc
Q 016094 248 ----TVPNTE--------------NNVVGHLKEMG--WDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVH 305 (395)
Q Consensus 248 ----~~p~~~--------------~~~~~~~~~~g--~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H 305 (395)
..+... ....+...+.. ..+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~-~did~~v~H 275 (350)
T 4ewp_A 197 WSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREALDAAGVEP-EDLAAFIPH 275 (350)
T ss_dssp TTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHHHHHTCCG-GGEEEEEEC
T ss_pred cceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHHHhhcCCh-hHhceEEec
Confidence 011100 00000000011 13555 688999999999999999999999997 999 99999
Q ss_pred CCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeee
Q 016094 306 PGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVV 385 (395)
Q Consensus 306 ~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~l 385 (395)
|+|+++++.+++.||+|++|+... ++++|||++|||+|++|++++++ |++++| |+|++++||+|++|++++
T Consensus 276 q~~~~i~~~~~~~Lgl~~~~~~~~--~l~~~GNtssasi~~~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~v 346 (350)
T 4ewp_A 276 QANMRIIDEFAKQLKLPESVVVAR--DIADAGNTSAASIPLAMHRLLEE----NPELSG---GLALQIGFGAGLVYGAQV 346 (350)
T ss_dssp CSCHHHHHHHHHHTTCCTTSEECC--THHHHCBCGGGHHHHHHHHHHHH----CGGGTT---SEEEEEEEETTTEEEEEE
T ss_pred CCCHHHHHHHHHHcCcChHhEEec--ccccccchHHHHHHHHHHHHHHh----CCCCCc---CEEEEEEEchhhEeEEEE
Confidence 999999999999999999997642 59999999999999999999998 899999 999999999999999999
Q ss_pred EEec
Q 016094 386 LRSI 389 (395)
Q Consensus 386 lr~~ 389 (395)
|||+
T Consensus 347 lr~P 350 (350)
T 4ewp_A 347 VRLP 350 (350)
T ss_dssp EECC
T ss_pred EEeC
Confidence 9996
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-57 Score=450.58 Aligned_cols=364 Identities=24% Similarity=0.349 Sum_probs=300.3
Q ss_pred CCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHH
Q 016094 15 GPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDA 94 (395)
Q Consensus 15 ~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.++++|.++|+|+|+++++|+++.+.+..... +. + ..++..+|++++||++||++.+.+ .|....+..|++++
T Consensus 29 ~~~v~I~gigt~lP~~~v~n~el~~~~~~~~~-~~-~-~~~~~~~i~~~tGI~~R~~~~~~~----~p~~~~~~~ps~~~ 101 (465)
T 3e1h_A 29 ELGLSITGLGVQYPPYSLGPDAIDILSKRYHP-ES-P-AMKKVLAINRYTGIDQRSSIGNPD----HPLVNKPNPPTVKE 101 (465)
T ss_dssp CCCEEEEEEEEECCSSCCBCTHHHHHTCSSSC-CC-H-HHHHHHHHTTTSCCCCBCCSSCTT----CGGGSSSSCCCHHH
T ss_pred CCCEEEEEEEEECCCcEEcHHHHHHHHHHhcc-cc-h-hHHHHHHHHHhcCCceEEEeeccc----CcccccccCCCHHH
Confidence 34599999999999999999999876532211 11 1 123455799999999999986543 23334566899999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccccchHHHHHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY-SQGCYMGGAVIR 173 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i-~~~C~s~~~al~ 173 (395)
|++.|.+...+|+++|+++||+++|++++|||+||+++++++..|+++.+|+++||+++.+. .+++ +++|+|++.||.
T Consensus 102 r~~~~~~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~-~~dv~~~~Csgg~~AL~ 180 (465)
T 3e1h_A 102 LHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLE-KVLLHGIGCSGGLAALR 180 (465)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCE-EEEECSCGGGHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCee-EEEecCCcchHHHHHHH
Confidence 99999999999999999999999999999999999999888789999999999999987653 5788 899999999999
Q ss_pred HHHHHHHc----CCCCeEEEEEecccccccCCCCch----hhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeec
Q 016094 174 HAKDIAEN----NPGARVLVVCCDITVLHFHEPTEA----RLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCS 245 (395)
Q Consensus 174 ~A~~ll~~----g~~~~vLvv~~e~~s~~~~~~~~~----~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~ 245 (395)
+|.++|++ |..++||||++|.++..+ ++... .++++.+..+|||||+|+||++++.........+++.+..
T Consensus 181 ~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~-~~~~~~~~~~~~d~~t~~LFGDGAaAvVl~~~~~~~~~~~~~~~l~~~~ 259 (465)
T 3e1h_A 181 TAANLCLGHTARGKPARILVLALEVSTTMV-RSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWE 259 (465)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEEECCGGGH-HHHHHHHHHHTCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEE
T ss_pred HHHHHHhcccccCCCCEEEEEEEeecchhc-CcccccccccccccccccccccceeEEEEEccCCCccccccceeeccce
Confidence 99999997 889999999999998733 22100 0134568899999999999998754210012357777766
Q ss_pred ceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcc-------cCCCCCCceEEEEcCCChHHHHHHHHH
Q 016094 246 QMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSP-------IGISDWNSLFYIVHPGGKVILDQVEQN 318 (395)
Q Consensus 246 ~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~-------~g~~~~~di~~i~H~~~~~~~~~i~~~ 318 (395)
...+|.+...+.|.+.+.|+.+.+++++|+++.+.++++++++|++ +|+++ +||.|++||+|++|++.++++
T Consensus 260 ~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~-~DId~~~Hqan~rIl~~v~~~ 338 (465)
T 3e1h_A 260 NRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKP-ADFDWAMHPGGATILSGAESA 338 (465)
T ss_dssp EEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSG-GGSEEEECCSSHHHHHHHHHH
T ss_pred EEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCH-HHceEEecCCChHHHHHHHHH
Confidence 6778988888888888888877779999999999999999999887 67886 999444999999999999999
Q ss_pred cCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCC-CCCceEEEEEEcccceeeeeeEEecc
Q 016094 319 LGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTG-EGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 319 lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G-~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
||++++|+..+++++++||||+||++|++|++++++.. |++++| .+.|+|++++||+|++|++++|||..
T Consensus 339 Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~--g~l~~Gg~~~d~vll~gfG~Glt~~~~llr~~~ 409 (465)
T 3e1h_A 339 MGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDM--DALAPGGKVKEYVVGCAFGPGINVEMCMLKRRM 409 (465)
T ss_dssp HTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTT--TSCSSSSCCCSEEEEEEEETTTEEEEEEEEECC
T ss_pred hCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcc--cccCCCCCCCCEEEEEEEhHHHhhhheeeEEec
Confidence 99999999988889999999999999999999988611 346654 11289999999999999999999975
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-56 Score=442.61 Aligned_cols=358 Identities=21% Similarity=0.258 Sum_probs=299.8
Q ss_pred CcccCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhh--------
Q 016094 8 GDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILK-------- 79 (395)
Q Consensus 8 ~~~~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~-------- 79 (395)
=..||.+.+ ++|.+||+++|++.++|+++.++++... .+. +++++ +.+|++++||++||++.+.+...
T Consensus 18 ~~~~~~~m~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~-~~~-~~~~~-~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~ 93 (413)
T 3v7i_A 18 LYFQSNAMA-AYLCAPAVIHGEHSVETREIVEEVRGRH-PHA-PWAPR-IDGIAASTGIESRGWMLPLEAAVAPGGGGDL 93 (413)
T ss_dssp ------CCC-EEEECCEEEECSEEEEHHHHHHHHHHHC-SSC-SSGGG-HHHHHHHHTCSEEEESSCHHHHHSCCCCCCC
T ss_pred hhhccCCCC-eEEEeeEeeCCCcccCHHHHHHHHHHhc-ccc-hhHHH-HHHHHHhCCcCeeeeecCHHHhccccccccc
Confidence 346888877 9999999999999999999999986543 222 23333 67899999999999999866530
Q ss_pred -c------CCCCc-------------CCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCC
Q 016094 80 -E------NPNMS-------------CYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMP 139 (395)
Q Consensus 80 -~------~~~~~-------------~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p 139 (395)
. .|.++ ....+++.+|+..+.+...+|+++|+++||+++|+++++||+||+++++++..|
T Consensus 94 ~~~~~~~~~~~~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P 173 (413)
T 3v7i_A 94 GAAREALVRDGFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALP 173 (413)
T ss_dssp HHHHHHC------CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSS
T ss_pred ccccccccccccchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcC
Confidence 0 01111 145789999999999999999999999999999999999999999999997789
Q ss_pred CHHHHHHHHcCCCCccccceee-ccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhcc
Q 016094 140 GADVRLMNLLGLEPSVNRLMIY-SQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGD 218 (395)
Q Consensus 140 ~~a~~l~~~LGl~~~~~~~~~i-~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GD 218 (395)
+.+.+|+.+||+++... .+++ +++|+|++.||.+|.++|++|+.++||||++|.+|..+ ++.|++..+.+...+|||
T Consensus 174 ~~a~~v~~~LGl~~~~~-~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-~~~d~~~~~lv~~~LFGD 251 (413)
T 3v7i_A 174 GLDVALANRLPLRGDTM-LLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-QPADDTLESLIVRLLFAD 251 (413)
T ss_dssp CHHHHHHHHTTCCTTCE-EEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-CSSCCSTTHHHHHHHBCC
T ss_pred HHHHHHHHHhCCCCCce-EEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-Cccccchhhhhcceeecc
Confidence 99999999999987543 6777 99999999999999999999999999999999999744 566544444556899999
Q ss_pred ccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhc------cc
Q 016094 219 GAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMS------PI 292 (395)
Q Consensus 219 GAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~------~~ 292 (395)
||+|+||++++... +.+++.+.++..+|++...+.|...+.|+.+.|..+++. +++.++++++++|+ ++
T Consensus 252 GAaAvvl~~~~~~~----~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~-~v~~~~~~i~~~L~~~~~~~~~ 326 (413)
T 3v7i_A 252 TAVAAVVTGRPRPE----SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPR-AVQETVTAMWEWLRVRYEDDPS 326 (413)
T ss_dssp EEEEEEEESSCCTT----EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHH-HHHHHHHHHHHHHHHHTSSSCT
T ss_pred ccEEEEEEecCCCC----CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHH-HHHHHHHHHHHHHhhccccccC
Confidence 99999999876422 356777766677898888888988888888888777885 55569999999999 88
Q ss_pred CCCCCCce-EEEEcCCChHHHHHHHHHcC--CCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCce
Q 016094 293 GISDWNSL-FYIVHPGGKVILDQVEQNLG--LGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEY 369 (395)
Q Consensus 293 g~~~~~di-~~i~H~~~~~~~~~i~~~lg--i~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~ 369 (395)
|++ | +|++||+|.++++.+++.|| +++||+..+|.+++ ||||+||++|++|++++ + +++++| |+
T Consensus 327 gl~----id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~-~----~~~~~G---d~ 393 (413)
T 3v7i_A 327 SWH----PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH-D----AGQKTG---SR 393 (413)
T ss_dssp TCC----CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-H----HCCCTT---CE
T ss_pred CCc----eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-h----CCCCCC---CE
Confidence 866 6 99999999999999999999 99999977677899 99999999999999999 5 779999 99
Q ss_pred EEEEEEcccceeeeeeEEec
Q 016094 370 GVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 370 vll~~~G~G~~~~a~llr~~ 389 (395)
+++++||+|++|++++|||.
T Consensus 394 vll~~fG~Glt~~~~ll~w~ 413 (413)
T 3v7i_A 394 AVLYAAAPGLTATALEGEWL 413 (413)
T ss_dssp EEEEEEETTTEEEEEEEEEC
T ss_pred EEEEEECHHHhHhhhheEeC
Confidence 99999999999999999994
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-55 Score=428.76 Aligned_cols=318 Identities=17% Similarity=0.252 Sum_probs=267.6
Q ss_pred CceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHH
Q 016094 16 PSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDAR 95 (395)
Q Consensus 16 ~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
++++|.++|+|+|+++++|+++.+.+. ..+ .+||.+++||++||++.+++.
T Consensus 29 ~~v~I~gig~~lP~~~v~n~~l~~~~~--~~~---------~~~i~~~tGI~~R~~a~~~~~------------------ 79 (365)
T 3gwa_A 29 PRAAIADIAGHLPEQVLTNDVLAQLYP--DWP---------AEKILAKTGIRERRIAAPRET------------------ 79 (365)
T ss_dssp CEEEEEEEEEECCSEEEEHHHHHHHCT--TCC---------HHHHHHHHCCCEEEECCTTCC------------------
T ss_pred ccEEEEEEEEeCCCcEEcHHHHHHHcc--CCC---------HHHHHHhcCccEEEECCCCCC------------------
Confidence 348999999999999999999998741 111 379999999999999977663
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHH
Q 016094 96 HAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRH 174 (395)
Q Consensus 96 ~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~ 174 (395)
..+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+++.+||++.... +++++++|+|++.||..
T Consensus 80 -------~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~C~s~~~Al~~ 151 (365)
T 3gwa_A 80 -------AADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAG-ALDVNLGCSGYVYGLSL 151 (365)
T ss_dssp -------HHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSE-EEEEECSTTHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCce-EEEecccChHHHHHHHH
Confidence 899999999999999999999999999999998 788999999999999984333 88999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc--------
Q 016094 175 AKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ-------- 246 (395)
Q Consensus 175 A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~-------- 246 (395)
|.++|++|+.++|||+++|.++. +.++.| +....+|||||+|+||++++.... ....+.+.+.+.
T Consensus 152 A~~~i~~g~~~~vLvvg~e~~s~-~~~~~d-----r~~~~lfGDGAaA~vl~~~~~~~~-~i~~~~~~s~g~~~~~~~~~ 224 (365)
T 3gwa_A 152 AKGLVETGAARCVLLLTADTYSK-YLHPLD-----KSVRTLFGDGASATAVIAEHGELE-RIGPFVFGTDGRGAPNLIVK 224 (365)
T ss_dssp HHHHHHTTSCSEEEEEEEECGGG-GSCTTC-----HHHHTTBCCEEEEEEEEEECSSSC-SEEEEEEEECGGGGGGEEEC
T ss_pred HHHHHHcCCCCEEEEEEEchhhc-cCCccc-----ccccccccceeEEEEEEecCCCCC-ceEEEEEEEcCCCCCeEEec
Confidence 99999999999999999999997 435543 346789999999999998765310 001233433332
Q ss_pred ---eecCCCCCceeeeEecCc-----eeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHH
Q 016094 247 ---MTVPNTENNVVGHLKEMG-----WDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVE 316 (395)
Q Consensus 247 ---~~~p~~~~~~~~~~~~~g-----~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~ 316 (395)
...|.+.+.+.|.....+ ..+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++
T Consensus 225 ~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~Hq~n~~i~~~~~ 303 (365)
T 3gwa_A 225 AGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGEPR-ENIDCFVLHQANRFMLDALR 303 (365)
T ss_dssp SSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHH
T ss_pred CCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHH
Confidence 112333333444433221 23555 688999999999999999999999997 999 9999999999999999
Q ss_pred HHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 317 QNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 317 ~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
++||+|+||++.+ +++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 304 ~~Lgl~~ek~~~~---l~~~GNtssAsipl~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 304 KKMKIPEHKFPVL---MEHCGNTVSSTLPLALETMRAN----GTLARG---MRLMLLGFGVGYSWAGCLVNF 365 (365)
T ss_dssp HHHTCCGGGSCCC---CTTTCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHhCCCHHHHHHH---HhcccchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEC
Confidence 9999999999874 9999999999999999999998 999999 999999999999999999998
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-55 Score=419.96 Aligned_cols=311 Identities=20% Similarity=0.284 Sum_probs=262.3
Q ss_pred CCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHH
Q 016094 14 RGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLD 93 (395)
Q Consensus 14 ~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
+.++.+|.++|+|+|+++++|+|+++.+ ..+ .+||.+++||++||++.++++
T Consensus 6 ~~~~~~~~~~g~ylP~~~v~n~~l~~~~---~~~---------~~~i~~~tGi~~R~~a~~~~~---------------- 57 (323)
T 3il3_A 6 HHMNSRILSTGSYLPSHIRTNADLEKMV---DTS---------DEWIVTRSGIRERRIAAEDET---------------- 57 (323)
T ss_dssp --CEECCCEEEEECCSCEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEECCCTTCC----------------
T ss_pred ccccCceeEEEEECCCceEcHHHHHHHh---CCC---------HHHHHHhcCCcEEEECCCCCC----------------
Confidence 3456789999999999999999998864 222 368999999999999977663
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHH
Q 016094 94 ARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVI 172 (395)
Q Consensus 94 ~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al 172 (395)
..+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+++.+||+++.+ +++++++|+|++.||
T Consensus 58 ---------~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~~C~s~~~al 126 (323)
T 3il3_A 58 ---------VATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAI--SFDLAAACTGFVYAL 126 (323)
T ss_dssp ---------HHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCSSCE--EEEECCGGGHHHHHH
T ss_pred ---------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCCCcc--EEEECCccHHHHHHH
Confidence 899999999999999999999999999999998 77899999999999997655 899999999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecce----e
Q 016094 173 RHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM----T 248 (395)
Q Consensus 173 ~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~----~ 248 (395)
..|.++|++|+.++|||+++|.++. +.++.+ +.+..+|||||+|+||++++..++ ..+.+...+.. .
T Consensus 127 ~~A~~~i~~g~~~~vLvvg~e~~s~-~~~~~d-----~~~~~lfGDGA~A~vl~~~~~~~i---~~~~~~s~g~~~~~~~ 197 (323)
T 3il3_A 127 SVADQFIRAGKVKKALVIGSDLNSR-KLDETD-----RSTVVLFGDGAGAVILEASEQEGI---ISTHLHASADKNNALV 197 (323)
T ss_dssp HHHHHHHHTTSCSEEEEEEEEEGGG-SCCTTC-----TTTTTTBCEEEEEEEEEEESSCCE---EEEEEEECCCCSCSEE
T ss_pred HHHHHHHHCCCCCEEEEEEeecccc-ccCccc-----cccccccccceEEEEEEEcCCCCe---EEEEEEEcCCCcceEE
Confidence 9999999999999999999999997 334433 346789999999999998764322 12233332211 1
Q ss_pred cCCCCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccc
Q 016094 249 VPNTENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKL 326 (395)
Q Consensus 249 ~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~ 326 (395)
.|..... ....+ .+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|+||+
T Consensus 198 ~~g~~~~----~~~~~-~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~lgl~~ek~ 271 (323)
T 3il3_A 198 LAQPERG----IEKSG-YIEMQGNETFKLAVRELSNVVEETLLANNLDK-KDLDWLVPHQANLRIITATAKKLEMDMSQV 271 (323)
T ss_dssp CCCCCTT----CSSCS-CCEECHHHHHHHHHHHHHHHHHHHHHTTTCCT-TTCCEEEECCSCHHHHHHHHHHTTCCGGGB
T ss_pred ECCCCCC----CCCCC-cEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCcCHHHh
Confidence 2321100 01112 2334 788999999999999999999999997 999 99999999999999999999999999
Q ss_pred hHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 327 GASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 327 ~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+.+ +++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 272 ~~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 272 VVT---LDKYANNSAATVPVALDEAIRD----GRIQRG---QLLLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp CCC---HHHHCBCGGGHHHHHHHHHHHT----TSSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred hcc---HhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEC
Confidence 875 9999999999999999999998 899999 999999999999999999998
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-55 Score=425.01 Aligned_cols=318 Identities=18% Similarity=0.254 Sum_probs=266.2
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
+++|.++|+|+|+++++|+|+.+.+ ..+ ..+||.+++||++||++.+++.
T Consensus 16 ~v~I~~ig~~lP~~~v~n~~l~~~~---~~~--------~~~~i~~~tGI~~R~~a~~~~~------------------- 65 (354)
T 4efi_A 16 GARIAGVVSCVPSKQVDNDYFVERF---DAS--------AVRDVVKMIGVNRRRWADAQTS------------------- 65 (354)
T ss_dssp SEEEEEEEEEECSCEEEGGGGTTTS---CHH--------HHHHHHHHHCCSEEECCCTTCC-------------------
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHh---CCC--------cHHHHHHhcCCeEEEEcCCCCC-------------------
Confidence 4899999999999999999998763 111 1379999999999999976663
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
..+|+++|+++||+++|+++++||+||++++++ +..|+.+.+++++||++.... +++++++|+|++.||..|
T Consensus 66 ------~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~aC~s~~~al~~A 138 (354)
T 4efi_A 66 ------AGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCL-ALDINLGCSGYPQALWLG 138 (354)
T ss_dssp ------HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSE-EEEECCCTTHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCcc-EEeeCcccHHHHHHHHHH
Confidence 899999999999999999999999999999998 889999999999999963333 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc----eecCC
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----MTVPN 251 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----~~~p~ 251 (395)
.++|++|..++|||+++|.+|. +.++. ++.+..+|||||+|+||++++.... ..+.+.+.+. ...|.
T Consensus 139 ~~~i~~g~~~~vLvvg~e~~s~-~~~~~-----d~~~~~lfGDGA~A~vl~~~~~~~~---~~~~~~s~g~~~~~~~~~~ 209 (354)
T 4efi_A 139 MNLIQTGAAKRVLLAVGDTISK-MIDPT-----DRSTSLLFGDAGTMTALETSNGDAA---AHFIIGADGKGARNLIVPS 209 (354)
T ss_dssp HHHHHTTSCSEEEEEEEECGGG-GCCTT-----CHHHHTTBCCEEEEEEEEECCSCCE---EEEEEEECGGGGGGEECCS
T ss_pred HHHHHCCCCCEEEEEEechhcc-cCCcc-----ccccccccccceeEEEEeecCCCCc---eEEEEEEcCCCcceEEecC
Confidence 9999999999999999999997 44454 3446789999999999999775421 1344444332 12222
Q ss_pred ------CCCc-eeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCC
Q 016094 252 ------TENN-VVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLG 322 (395)
Q Consensus 252 ------~~~~-~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~ 322 (395)
+.+. ..+..+. ...+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|
T Consensus 210 ~g~~p~~~~~~~~~~~~~-~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~Lgl~ 287 (354)
T 4efi_A 210 GGFKPYDAAADERMAGKS-PECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDK-DSYDAFLFHQANLFMLKHLAKKAGLP 287 (354)
T ss_dssp SSSSCCCGGGCGGGTTCC-TTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHHHHTTCC
T ss_pred CCCCCCcccccccccccc-ccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHhCcC
Confidence 1110 0011111 113444 678999999999999999999999997 999 9999999999999999999999
Q ss_pred cccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccCC
Q 016094 323 KEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPID 392 (395)
Q Consensus 323 ~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~~ 392 (395)
+||++.+ +++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||.+..
T Consensus 288 ~ek~~~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~ll~~~~~~ 347 (354)
T 4efi_A 288 AERVPVN---IGEYGNTSCASIPLLITTELKD----RLKEET---LQLGMFGFGVGYSWASAALAVGPLN 347 (354)
T ss_dssp GGGSCCC---HHHHCBCGGGHHHHHHHHHSHH----HHHHSC---EEEEEEEEETTTEEEEEEEEECCCS
T ss_pred HHHHHHH---HhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheeeEEEECCcc
Confidence 9999875 8999999999999999999998 889999 9999999999999999999998753
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-55 Score=429.33 Aligned_cols=338 Identities=20% Similarity=0.284 Sum_probs=270.8
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhh---cCCcchHHHHH---------HHHHHHHhcCcceeeeeechhhhhcCCCC
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRV---TNSEHKIELKE---------KFRRICERSSIRKRYFYLTEEILKENPNM 84 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~---~~~~~~~~~~~---------~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 84 (395)
+++|.|+|+|+|+++++|+|+.+.+... .++++.+++++ ..+||.+++||++||++.+++.++ |
T Consensus 24 ~~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~~tGI~~R~~a~~~~~~~--~-- 99 (392)
T 3led_A 24 PAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASGIKSRYVVAKPGIVD--P-- 99 (392)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHHHHCCCEEEESCCGGGGC--T--
T ss_pred ceEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHHccCCceEEEecCccccc--c--
Confidence 4899999999999999999999875321 11111122211 147999999999999998765432 2
Q ss_pred cCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeecc
Q 016094 85 SCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQ 163 (395)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~ 163 (395)
.+..|++++|++.+.+...+|+++|+++||+++|+++++||+||++++++ +..|+.+.+|+.+||++ .+ +++++.
T Consensus 100 -~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~-~~--~~dv~~ 175 (392)
T 3led_A 100 -DVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG-GF--AFDMNV 175 (392)
T ss_dssp -TTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC-SE--EEEEEC
T ss_pred -cccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC-Ce--EEEECC
Confidence 23467778888888778999999999999999999999999999999998 78999999999999994 44 789999
Q ss_pred ccchHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe
Q 016094 164 GCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLS 243 (395)
Q Consensus 164 ~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~ 243 (395)
+|+|++.||.+|.++|++|+.++|||+++|.+|. +.++.| +.+..+|||||+|+||++++... ..+.+.+
T Consensus 176 aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~-~~d~~d-----r~t~~lFGDGA~A~vl~~~~~~~----~~~~i~~ 245 (392)
T 3led_A 176 ACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG-HLNFRD-----RDSHFIFGDVATAAIVERADDAQ----GGWSILG 245 (392)
T ss_dssp GGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTC-----TTTTTTBCEEEEEEEEEEGGGCC----SSEEEEE
T ss_pred ccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC-cCCcCc-----ccCCcccccccEEEEEEecCCCC----CCCeEEE
Confidence 9999999999999999999999999999999997 445543 33578999999999999876421 1233332
Q ss_pred ecceec-------CC------CCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCC
Q 016094 244 CSQMTV-------PN------TENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGG 308 (395)
Q Consensus 244 ~~~~~~-------p~------~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~ 308 (395)
...... +. ..+.+.| ....+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|
T Consensus 246 ~~~~s~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~-~dId~~v~Hqan 320 (392)
T 3led_A 246 TKLKTQFSNNIRNNAGFLNRAWPEGRDK----ADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDP-HGLKRMWLHQAN 320 (392)
T ss_dssp EEEEECCCSSEEBCCSGGGGGSGGGTTS----GGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECSSC
T ss_pred EEEEEccccccccCCCcccCCCcccccc----ccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCcEEEEcCCC
Confidence 211110 10 0001111 1123445 688999999999999999999999997 999 99999999
Q ss_pred hHHHHHHHHHc-C--CCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeee
Q 016094 309 KVILDQVEQNL-G--LGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVV 385 (395)
Q Consensus 309 ~~~~~~i~~~l-g--i~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~l 385 (395)
.++++.++++| | ++.+|++. ++++||||++||+|++|+++ . +++++| |+|++++||+|++|++++
T Consensus 321 ~~i~~~~~~~llgl~~~~~k~~~---~l~~~GNtssAsipl~L~~~--~----~~~~~G---d~vll~gfG~G~t~~~~l 388 (392)
T 3led_A 321 INMNEIIGRKVLGRDPTRDENVI---ILDDYANTSSAGSIIAFHKH--Q----DDMAQG---DLGLICSFGAGYSAGTVF 388 (392)
T ss_dssp HHHHHHHHHHHHTSCCCTTTBCC---CHHHHCBCGGGHHHHHHHHC--C----TTCCTT---CEEEEEEEETTTEEEEEE
T ss_pred HHHHHHHHHHhcCCCCCHHHHHH---HHhhhCccHHHHHHHHHHHH--h----CCCCCC---CEEEEEEEChhhEeEEEE
Confidence 99999999996 6 67889876 49999999999999999986 3 679999 999999999999999999
Q ss_pred EEec
Q 016094 386 LRSI 389 (395)
Q Consensus 386 lr~~ 389 (395)
|||.
T Consensus 389 l~~~ 392 (392)
T 3led_A 389 VQKR 392 (392)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-52 Score=410.13 Aligned_cols=349 Identities=32% Similarity=0.600 Sum_probs=292.6
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+...... .++..+..+||.+++||++||++.++. ..+|.+ ..+++.+|+.
T Consensus 14 v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~i~~~~Gi~~R~~~~~~~--~~~~~~---~~~~~~~~~~ 86 (374)
T 2h84_A 14 SFVLGIGISVPGEPISQQSLKDSISNDFSD--KAETNEKVKRIFEQSQIKTRHLVRDYT--KPENSI---KFRHLETITD 86 (374)
T ss_dssp CEEEEEEEECSSSCEEHHHHHHHHHHHSCS--CHHHHHHHHHHHHTTCCCEECCSSCTT--SGGGCG---GGGGGCCHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhhcc--ChHHHHHHHHHHHhCCcCcceeecCcc--cccccc---ccCChHHHHH
Confidence 999999999999999999999886432211 122334567899999999999986541 112222 1246677777
Q ss_pred H---HHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccchHHHHHH
Q 016094 98 M---LIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYS-QGCYMGGAVIR 173 (395)
Q Consensus 98 ~---~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~-~~C~s~~~al~ 173 (395)
+ +.+...+|+.+|+++||+++|+++++||+||+++++++..|+.+.+|+.+||+++... ++++. ++|+|++.||.
T Consensus 87 ~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~aCss~~~al~ 165 (374)
T 2h84_A 87 VNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVE-RVSLNLMGCLAGLSSLR 165 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCc-eEEecCCcCHHHHHHHH
Confidence 7 9999999999999999999999999999999999988778999999999999987432 78886 89999999999
Q ss_pred HHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCC
Q 016094 174 HAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTE 253 (395)
Q Consensus 174 ~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 253 (395)
+|.++|++|.+++|||+++|.++..+.+|.+ +......++|||||+|+||++.+... ....+++.+.+....|++.
T Consensus 166 ~A~~~i~~g~~~~vLv~g~e~~s~~~~~~~d--r~~~~~~~lfGDGA~A~vL~~~~~~~--~~~~~~l~~~g~~~~~~~~ 241 (374)
T 2h84_A 166 TAASLAKASPRNRILVVCTEVCSLHFSNTDG--GDQMVASSIFADGSAAYIIGCNPRIE--ETPLYEVMCSINRSFPNTE 241 (374)
T ss_dssp HHHHHHTTCTTCEEEEEEEECCGGGCCCSSS--HHHHHHHHHBCCEEEEEEEESSCCTT--CCCCEEEEEEEEEECSSCT
T ss_pred HHHHHHHcCCCCEEEEEEEEecchhhcCCCC--HHHHhhhhhhccCcEEEEEecCCCcc--cCCceeEEeeeeEEeCCCc
Confidence 9999999999999999999999874435543 22224578999999999999876421 1124678777766778777
Q ss_pred CceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccC------CCCCCce-EEEEcCCChHHHHHHHHHcCCCcccc
Q 016094 254 NNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIG------ISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKL 326 (395)
Q Consensus 254 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g------~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~ 326 (395)
..+.|...++|+.+.+++++|+.+.+.++++++++|+++| +++ +|| +| +||+|.++++.+++.||++++|+
T Consensus 242 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~-~did~~-~H~~~~~i~d~~~~~lgl~~~k~ 319 (374)
T 2h84_A 242 NAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISA-KDCEFL-IHTGGKSILMNIENSLGIDPKQT 319 (374)
T ss_dssp TSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCS-SSSEEE-ECCCCHHHHHHHHHHTTCCGGGG
T ss_pred ccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCCh-hhcCEe-ECCCCHHHHHHHHHHcCCCHHHH
Confidence 6677777778877777899999999999999999999999 997 999 99 99999999999999999999999
Q ss_pred hHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEec
Q 016094 327 GASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 327 ~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
..+++++++|||+++|++|++|++++++ ++ +| |+|++++||+|++|++++|||.
T Consensus 320 ~~s~~~~~~~Gnt~sasi~~~L~~~~~~----~~--~G---d~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 320 KNTWDVYHAYGNMSSASVIFVMDHARKS----KS--LP---TYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp HHHHHHHHHHCBCTTHHHHHHHHHHHTC----SC--CC---SEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHHhCCchhhHHHHHHHHHHhh----cC--CC---CeEEEEEeccchhhhhhhheec
Confidence 8666689999999999999999999988 65 78 9999999999999999999996
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-53 Score=410.44 Aligned_cols=314 Identities=20% Similarity=0.268 Sum_probs=262.8
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHh--hcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFR--VTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDA 94 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.++|.++|+|+|+++++|+++.+.+.. ...+ .+||.+++||++||++.+++.
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~~~~~---------~~~i~~rtgi~~r~~~~~~~~----------------- 64 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQGIETS---------DEWIVARTGIHARYFAEPDVT----------------- 64 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC---CCCC---------HHHHHHHHCCSEEEECCTTCC-----------------
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhccccCCCC---------HHHhHHhcCceEEEEcCCCCC-----------------
Confidence 499999999999999999999987521 1111 368999999999999876663
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIR 173 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~ 173 (395)
..+|+.+|+++||+++|+++++||+||++++++ +..|+.+.+|+.+||++.... +++++.+|+|++.||.
T Consensus 65 --------~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~-~~~v~~~C~s~~~al~ 135 (333)
T 4dfe_A 65 --------TSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGA-AFDVQAVCSGFAYAVA 135 (333)
T ss_dssp --------HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCE-EEEEECGGGHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCc-EEEeCcccHHHHHHHH
Confidence 899999999999999999999999999999998 778999999999999954443 8899999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecce----ec
Q 016094 174 HAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM----TV 249 (395)
Q Consensus 174 ~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~----~~ 249 (395)
+|.++|++|+.++|||+++|.++..+ ++.+ +.+.++|||||+|+||++.+..++ ..+.+...+.. ..
T Consensus 136 ~A~~~i~~g~~~~vLvvg~e~~s~~~-~~~d-----~~~~~lfGDGA~A~vl~~~~~~~i---~~~~~~~~g~~~~~~~~ 206 (333)
T 4dfe_A 136 TADSFIRSGQHRTALVIGAETFSRIL-DFKD-----RTTCVLFGDGAGAVILQASDEPGV---LASALHADGSHSNILCT 206 (333)
T ss_dssp HHHHHHHTTSCSEEEEEEEEEGGGGC-CTTC-----TTTTTTBCEEEEEEEEEEESSCSE---EEEEEEECGGGGGGEEB
T ss_pred HHHHHHHcCCCCEEEEEEeecccccc-Cccc-----ccceeeeccccEEEEEEEcCCCCe---EEEEEEEccCCcCeEEE
Confidence 99999999999999999999999733 4433 335689999999999998764322 12334333321 12
Q ss_pred CCCCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccch
Q 016094 250 PNTENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLG 327 (395)
Q Consensus 250 p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~ 327 (395)
|... ..+.....++ +.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|+||++
T Consensus 207 ~~~~--~~~~~~~~~~-~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~ 282 (333)
T 4dfe_A 207 PGNV--NGGVVSGSAF-LHMDGQAVFKLAVNVLEKVAVEALEKANLSA-EQIDWLIPHQANIRIMQSTCRKLGLPQERMI 282 (333)
T ss_dssp CEEE--ETTEEEECCS-CEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHTTCCGGGBC
T ss_pred CCCC--CCcccccCcc-eeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhh
Confidence 2110 0011122232 334 688999999999999999999999997 999 999999999999999999999999998
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 328 ASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 328 ~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.+ +++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 283 ~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 283 VT---VGEHGNTSAASIPLALDVAVRD----GRIKRG---QNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp CC---HHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred hh---HHhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEC
Confidence 75 9999999999999999999998 899999 999999999999999999998
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-52 Score=410.30 Aligned_cols=346 Identities=25% Similarity=0.405 Sum_probs=292.3
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+.... .+. +. .+..+||.+++||++||++.+.+.+ ...|++.+|+.
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~-~~~-~~-~~~~~~i~~~~GI~~R~~~~~~~~~--------~~~~~~~~r~~ 78 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRH-TDH-PQ-LPLALRLIENTGVRTRHIVQPIEDT--------LEHPGFEDRNK 78 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHH-TTC-TT-HHHHHHHHHHTCCCEEEESSCHHHH--------TSCCCHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhc-cCh-hh-HHHHHHHHHhcCCCcceeecChhhh--------ccCCChhHHHH
Confidence 7899999999999999999998864221 110 00 1235689999999999998765542 13578999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY-SQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i-~~~C~s~~~al~~A~ 176 (395)
.+.+...+|+.+|+++||+++|+++++||.||+++++++..|+.+.+|+.+||+++... .+++ +++|+|++.||.+|.
T Consensus 79 ~~~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~aCss~~~Al~~A~ 157 (382)
T 1u0m_A 79 VYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTR-QIPIAQLGCAAGGAAINRAH 157 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCE-EEEECSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcc-eEEccCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988778999999999999987432 7888 899999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCce
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNV 256 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 256 (395)
++|++|.+++|||+++|.++. +.+|.+.++......++|||||+|+||++.+.. .+++.+......++..+.+
T Consensus 158 ~~i~~g~~~~vLv~g~e~~s~-~~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~~------g~~i~~~~~~~~~~~~~~~ 230 (382)
T 1u0m_A 158 DFCTAYPEANALIVACEFCSL-CYQPTDLGVGSLLCNGLFGDGIAAAVVRGRGGT------GVRLERNGSYLIPKTEDWI 230 (382)
T ss_dssp HHHHHSTTCEEEEEEEEEGGG-GCCTTCCSHHHHHHHHHBCEEEEEEEEETTTCS------EEEEEEEEEEECSSCTTTE
T ss_pred HHHHcCCCCEEEEEEEeccch-hcCcccCCHHHhhccchhcCCcEEEEEeccCCC------CcEEEEeeeEecCChHHhc
Confidence 999999999999999999986 344554322233347899999999999976542 2456554444456665556
Q ss_pred eeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHh
Q 016094 257 VGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSE 335 (395)
Q Consensus 257 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~ 335 (395)
.|...+.++++.+++++|+...+.++ +++++|+++|+++ +|| +|++||.|.++++.+++.||++++|+..++.++++
T Consensus 231 ~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~-~dId~v~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~ 308 (382)
T 1u0m_A 231 MYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDA-SDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTE 308 (382)
T ss_dssp EEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCS-SCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHH
T ss_pred CceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 66666667777778899998888999 9999999999997 999 99999999999999999999999999876778999
Q ss_pred cCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 336 YGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 336 ~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
|||+++|++|++|++++++ +++++| |+|++++||+|++|++++|||...
T Consensus 309 ~Gnt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~vl~~~~~ 357 (382)
T 1u0m_A 309 YGNIASAVVLDALRRLFDE----GGVEEG---ARGLLAGFGPGITAEMSLGCWQTA 357 (382)
T ss_dssp TCBCTTHHHHHHHHHHHHS----CCCCSS---CCCEEEEEETTTEEEEEEEEEECC
T ss_pred hCCchhhHHHHHHHHHHHh----cCCCCC---CEEEEEEEcccceeEEEEEEEeec
Confidence 9999999999999999998 889999 999999999999999999999744
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-52 Score=413.59 Aligned_cols=355 Identities=25% Similarity=0.384 Sum_probs=291.6
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeee-eechhhhhcCCCCcCCCCCCHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYF-YLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
++|.++|+|+|+++++|+++.+.+..... .+...+..+||.+++||++||+ +.+.+.. +.+.....+++.+|+
T Consensus 33 ~~I~~ig~~~P~~~v~n~~l~~~~~~~~~---~~~~~~~~~~i~~~tGI~~R~~~a~~~~~~---~~~~~~~p~~~~~r~ 106 (393)
T 1ted_A 33 AVIEGLATGTPRRVVNQSDAADRVAELFL---DPGQRERIPRVYQKSRITTRRMAVDPLDAK---FDVFRREPATIRDRM 106 (393)
T ss_dssp EEEEEEEEECCSCEEEHHHHHHHHHTC-------CCTTHHHHHHHTSCCSEEECSSCTTSTT---HHHHTTCSSCHHHHH
T ss_pred cEEEEeeeeCCCcccCHHHHHHHHHHhcc---cccHHHHHHHHHHhCCcCcceeeecChHhc---ccccccCCCCHHHHH
Confidence 89999999999999999999987632110 0000123579999999999999 8654310 000111235688999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY-SQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i-~~~C~s~~~al~~A 175 (395)
+.+.+...+|+.+|+++||+++|+++++||.||+++++++..|+.+.+|+.+||+++.+. .+.+ +++|+|++.||.+|
T Consensus 107 ~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~aCas~~~Al~~A 185 (393)
T 1ted_A 107 HLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSIS-RVVVNFMGCAAAMNALGTA 185 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGGHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcc-eeEeccchhHHHHHHHHHH
Confidence 999999999999999999999999999999999999988668999999999999987543 5666 99999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCC-CceEEEeecceecCCCCC
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNER-PLFQVLSCSQMTVPNTEN 254 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~-~~~~l~~~~~~~~p~~~~ 254 (395)
.++|++|.+++|||+++|.++..+ ++ +.++.+....++|||||+|+||++.+.... .. ...++.+.+....++...
T Consensus 186 ~~~i~~G~~~~vLv~g~e~~s~~~-~~-~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~-~~~~~~~i~~~~~~~~~d~~~ 262 (393)
T 1ted_A 186 TNYVRAHPAMKALVVCIELCSVNA-VF-ADDINDVVIHSLFGDGCAALVIGASQVQEK-LEPGKVVVRSSFSQLLDNTED 262 (393)
T ss_dssp HHHHHHSTTCEEEEEEEEECGGGC-CC-CSSHHHHHHHHHBCEEEEEEEEEEECTTSC-CCTTCEEEEEEEEEECTTCTT
T ss_pred HHHHHcCCCCEEEEEEEEeccccC-CC-CCCHHHhhhhhhhcCccEEEEEecCCCccc-cCcceeeeeccceEEcCCchh
Confidence 999999999999999999998743 32 112334446899999999999998753210 11 124676655555676666
Q ss_pred ceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHH
Q 016094 255 NVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYAL 333 (395)
Q Consensus 255 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~ 333 (395)
.+.|...+.|+.+..++++++...+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||++++|+..+|+++
T Consensus 263 ~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~dId~~~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~ 341 (393)
T 1ted_A 263 GIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQI-SDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVL 341 (393)
T ss_dssp SEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHH
T ss_pred hccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCH-hHCCEEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 666766666766667899999999999999999999999997 999 999999999999999999999999998777789
Q ss_pred HhcCCCCcchHHHHHHHHHhhhhhhhcc-cCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 334 SEYGNLGAPSVLFILDDVRKKSTEERKA-TTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 334 ~~~Gn~~sasi~~~L~~~~~~~~~~g~l-~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
++|||+++|++|++|++++++ +++ ++| |+|++++||+|++|++++|||..
T Consensus 342 ~~~GNt~sAsi~~~L~~~~~~----g~~~~~G---d~vll~~~G~G~t~~~~~l~~~~ 392 (393)
T 1ted_A 342 ARFGNMLSVSLIFVLETMVQQ----AESAKAI---STGVAFAFGPGVTVEGMLFDIIR 392 (393)
T ss_dssp HHHCBCTHHHHHHHHHHHHHS----CSSSSSS---EEEEEEEEETTTEEEEEEEEECC
T ss_pred HhhCCchHhHHHHHHHHHHhc----CccCCCC---CeEEEEEeccchhhhhhheeecc
Confidence 999999999999999999998 888 599 99999999999999999999964
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-53 Score=407.23 Aligned_cols=307 Identities=20% Similarity=0.282 Sum_probs=257.0
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+ ..+ .+||.+++||++||++.+++
T Consensus 5 ~~I~~~g~~lP~~~v~n~~~~~~~---~~~---------~~~i~~~~Gi~~R~~a~~~e--------------------- 51 (321)
T 3il6_A 5 ARISCTSRYVPENCVTNHQLSEMM---DTS---------AAWIHSRTGISERRIVTQEN--------------------- 51 (321)
T ss_dssp EEEEEEEEECCSCEEEHHHHHHHT---TSC---------HHHHHHHHSCSEEECCSSCC---------------------
T ss_pred EEEEEEEEECCCcEEcHHHHHHHh---CCC---------hhhhhhhcCceEEEECCCCC---------------------
Confidence 899999999999999999998874 222 36899999999999987554
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++|+++++||+||++++++ +..|+.+.+++++||+++.+ +++++++|+|++.||..|.
T Consensus 52 -----~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~aC~s~~~al~~A~ 124 (321)
T 3il6_A 52 -----TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAF--AFDISAACSGFVYALSMAE 124 (321)
T ss_dssp -----HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCE--EEEECCGGGHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCce--EEEeCcccHHHHHHHHHHH
Confidence 789999999999999999999999999999998 78899999999999998754 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc----eecCCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----MTVPNT 252 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----~~~p~~ 252 (395)
++|++|+.++|||+++|.+|. +.++.+ +.+..+|||||+|+||++++..++ ..+.+.+.+. ...|..
T Consensus 125 ~~i~~g~~~~vLvvg~e~~s~-~~~~~d-----r~~~~lfGDGA~A~vl~~~~~~~i---~~~~~~s~~~~~~~~~~~~~ 195 (321)
T 3il6_A 125 KLVLSGRYQTGLVIGGETFSK-MLDWTD-----RSTAVLFGDGAAGVLIEAAETPHF---LNEKLQADGQRWTALTSGYT 195 (321)
T ss_dssp HHHHTSSCCCEEEEEEECGGG-GSCTTC-----TTTGGGBCCEEEEEEEEEESSCCE---EEEEEEECGGGGGGEECCCC
T ss_pred HHHHCCCCCEEEEEEEccccc-cCCccc-----cccceeeccccEEEEEEEcCCCCE---EEEEEEEcCCCCCeEEeCCC
Confidence 999999999999999999997 445543 346789999999999998765322 1233433332 123332
Q ss_pred CCceeeeEe---cCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccch
Q 016094 253 ENNVVGHLK---EMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLG 327 (395)
Q Consensus 253 ~~~~~~~~~---~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~ 327 (395)
.....|... ..+ .+++ ++++|+++.+.++++++++|+ + +|| +|++||+|.++++.+++.||+|+||++
T Consensus 196 ~~~~~~~~~~~~~~~-~~~~~g~~v~~~~~~~~~~~i~~~l~-----~-~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~ 268 (321)
T 3il6_A 196 INESPFYQGHKQASK-TLQMEGRSIFDFAIKDVSQNILSLVT-----D-ETVDYLLLHQANVRIIDKIARKTKISREKFL 268 (321)
T ss_dssp CCCSTTCCCCCCCCC-SCEECHHHHHHHHHHHHHHHHHTTCC-----G-GGCSEEEECCSCHHHHHHHHHHHTCCGGGBC
T ss_pred CCCCCCCcccccccc-ceeechHHHHHHHHHHHHHHHHHHcC-----c-ccCCEEEEcCCCHHHHHHHHHHcCcCHHHhh
Confidence 112222211 122 2445 688999999999999999998 5 899 999999999999999999999999998
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 328 ASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 328 ~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.+ +++||||++||+|++|++++++ |++++| +.|+|++++||+|++|++++||+
T Consensus 269 ~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G-~~d~vll~~fG~G~t~~~~~l~v 321 (321)
T 3il6_A 269 TN---MDKYGNTSAASIPILLDEAVEN----GTLILG-SQQRVVLTGFGGGLTWGSLLLTL 321 (321)
T ss_dssp CC---GGGTCBCGGGHHHHHHHHHHHT----TSSCTT-SCCEEEEEEEETTTEEEEEEEEC
T ss_pred hh---HhhcccHHHHHHHHHHHHHHHh----CCCCCC-CCCEEEEEEEehhheeEEEEEEC
Confidence 74 9999999999999999999998 889987 12699999999999999999984
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-53 Score=413.92 Aligned_cols=314 Identities=18% Similarity=0.219 Sum_probs=260.6
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+ ..+ .+||.+++||++||++.+++.
T Consensus 26 ~~I~~~g~~~P~~~v~~~~l~~~~---~~~---------~~~i~~~tGi~~R~~a~~~~~-------------------- 73 (359)
T 3h78_A 26 PILAGLGFSLPKRQVSNHDLVGRI---NTS---------DEFIVERTGVRTRYHVEPEQA-------------------- 73 (359)
T ss_dssp CEEEEEEEECCSEEEEHHHHTTTS---SCC---------HHHHHHHHCCCEEEECCTTCC--------------------
T ss_pred cEEEEEEEECCCceEcHHHHHHHh---CCC---------HHHHHHhcCceEEEEcCCCCC--------------------
Confidence 899999999999999999998764 222 368999999999999977663
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++|+++++||+||++++++ +..|+.+.+++.+||+++.+ +++++.+|+|++.||.+|.
T Consensus 74 -----~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~aC~s~~~Al~~A~ 146 (359)
T 3h78_A 74 -----VSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIP--VLDIRAQASGLLYGLQMAR 146 (359)
T ss_dssp -----THHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCSCC--EEEEECGGGHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCc--EEEECCHhHHHHHHHHHHH
Confidence 889999999999999999999999999999998 77899999999999998655 8899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCC-C-CCCCCCceEEEeecce----ecC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPD-V-SLNERPLFQVLSCSQM----TVP 250 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~-~-~~~~~~~~~l~~~~~~----~~p 250 (395)
++|++|..++|||+++|.++. +.++.+. .+.+..+|||||+|+||++++. . ++ ..+.+...+.. ..|
T Consensus 147 ~~i~sG~~~~vLvvg~e~~S~-~~~~~d~---~~~t~~lfGDGAaA~vl~~~~~~~~~i---~~~~~~s~g~~~~~~~~~ 219 (359)
T 3h78_A 147 GQILAGLARHVLVVCGEVLSK-RMDCSDR---GRNLSILLGDGAGAVVVSAGESLEDGL---LDLRLGADGNYFDLLMTA 219 (359)
T ss_dssp HHHHTTSCSEEEEEEEEECGG-GCCCSTT---THHHHTTBCEEEEEEEEECCSCSSSEE---EEEEEEECGGGGGGEEBC
T ss_pred HHHHCCCcCEEEEEEEchhcc-cCCcccc---cccccceecceeEEEEEEecCCCCCce---EEEEEEEccCccceEEeC
Confidence 999999999999999999997 4445431 1446789999999999998764 2 11 12333333321 133
Q ss_pred C--CCC-ce---eeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCC
Q 016094 251 N--TEN-NV---VGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLG 322 (395)
Q Consensus 251 ~--~~~-~~---~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~ 322 (395)
. ... .. .+.....+ .+.| ++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|
T Consensus 220 ~~g~~~~~~~~~~~~~~~~~-~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~Hq~n~~i~~~~~~~lgl~ 297 (359)
T 3h78_A 220 APGSASPTFLDENVLREGGG-EFLMRGRPMFEHASQTLVRIAGEMLAAHELTL-DDIDHVICHQPNLRILDAVQEQLGIP 297 (359)
T ss_dssp CSSTTSSSTTCHHHHHTTTT-SCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCC
T ss_pred CCCCccCCccccccccccCC-ceEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCcC
Confidence 2 110 00 00001112 2344 688999999999999999999999997 999 9999999999999999999999
Q ss_pred cccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 323 KEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 323 ~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
+||++.+ +++||||++||+|++|++++++ +++| |+|++++||+|++|++++|||+.+
T Consensus 298 ~ek~~~~---l~~~GNt~sAsi~l~L~~~~~~------l~~G---d~vll~~fG~G~t~~~~ll~~~~~ 354 (359)
T 3h78_A 298 QHKFAVT---VDRLGNMASASTPVTLAMFWPD------IQPG---QRVLVLTYGSGATWGAALYRKPEE 354 (359)
T ss_dssp GGGBCCC---HHHHCBCGGGHHHHHHHHHGGG------SCTT---CEEEEEEEETTTEEEEEEEECC--
T ss_pred HHHhhhh---hhcccchHHHHHHHHHHHHHHh------CCCC---CEEEEEEEchhhhheeeeEEehhh
Confidence 9999875 9999999999999999999875 7899 999999999999999999999754
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-52 Score=408.43 Aligned_cols=322 Identities=17% Similarity=0.176 Sum_probs=259.1
Q ss_pred CceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHH
Q 016094 16 PSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDAR 95 (395)
Q Consensus 16 ~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
++++|.++|+|+|+++++|+|+.+.+..... +.....+||.+++||++||++.+++.
T Consensus 11 ~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~-----~~~~~~~~i~~~tGi~~R~~~~~~~~------------------ 67 (345)
T 3s21_A 11 QNVSIAGLAHIDAPHTLTSKEINERLQPTYD-----RLGIKTDVLGDVAGIHARRLWDQDVQ------------------ 67 (345)
T ss_dssp SSEEEEEEEEEECSEEEEHHHHHHHHHHHHH-----HHTCCCCHHHHTTCCSEEEECSSCCC------------------
T ss_pred cceEEEEEEEeCCCcEEcHHHHHHHHhhccc-----ccCCCHHHHHHhhCceeEEECCCCCC------------------
Confidence 3499999999999999999999987532110 00001368999999999999876653
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHH
Q 016094 96 HAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRH 174 (395)
Q Consensus 96 ~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~ 174 (395)
..+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+|+++||+++... +++++.+|+|++.||..
T Consensus 68 -------~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~aC~s~~~al~~ 139 (345)
T 3s21_A 68 -------ASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCM-TFDVANACLAFINGMDI 139 (345)
T ss_dssp -------HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCE-EEECCCGGGHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCce-EEeECCcCHHHHHHHHH
Confidence 899999999999999999999999999999998 788999999999999985333 78999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEecccccccCCCC------ch----hhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEee
Q 016094 175 AKDIAENNPGARVLVVCCDITVLHFHEPT------EA----RLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSC 244 (395)
Q Consensus 175 A~~ll~~g~~~~vLvv~~e~~s~~~~~~~------~~----~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~ 244 (395)
|.++|++|.+++|||+++|.++..+ ++. +. .+.......+|||||+|+||++.+... ....+.+.
T Consensus 140 A~~~i~~g~~~~vLvvg~e~~s~~~-~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~----~~~~i~~~ 214 (345)
T 3s21_A 140 AARMLERGEIDYALVVDGETANLVY-EKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVP----DAPRYKGG 214 (345)
T ss_dssp HHHHHHHTSCSEEEEEEEECCHHHH-HHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGST----TSCEEEEE
T ss_pred HHHHHHCCCCCEEEEEEEcccchhh-ccccccccCCccchhhhhhhccceeeccceeEEEEecCCCCC----CCcceeee
Confidence 9999999999999999999998632 111 00 011223568999999999999876421 01334432
Q ss_pred cceecCCCCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCC
Q 016094 245 SQMTVPNTENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLG 322 (395)
Q Consensus 245 ~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~ 322 (395)
.....+...+.+.+. .. .+.+ ++++++++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|
T Consensus 215 ~~~~~~~~~~~~~~~--~~--~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~lgl~ 289 (345)
T 3s21_A 215 VTRSATEWNKLCRGN--LD--RMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAV-EELDQFVIHQVSRPHTAAFVKSFGID 289 (345)
T ss_dssp EEEECGGGTTC---------------CHHHHHHHHHHHHHHHHHHHHHHCCCG-GGCSEEEECCSCHHHHHHHHHHHTCC
T ss_pred ccccCcchhhhcccc--Cc--ceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCcC
Confidence 222222221111111 01 1344 678999999999999999999999997 999 9999999999999999999999
Q ss_pred cccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 323 KEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 323 ~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+||++.+ +++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 290 ~ek~~~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 290 PAKVMTI---FGEHGNIGPASVPIVLSKLKEL----GRLKKG---DRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp GGGBCCC---HHHHCBCGGGHHHHHHHHHHHH----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHceee---HhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhhhheEEEEEC
Confidence 9999874 8999999999999999999998 899999 999999999999999999998
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-50 Score=437.53 Aligned_cols=377 Identities=61% Similarity=1.059 Sum_probs=308.7
Q ss_pred CCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCC
Q 016094 12 RSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPS 91 (395)
Q Consensus 12 ~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
++.++ ++|.|+|+|+|+++++|+++++.+.+.+..+..+++++..+|+.+++||++||++.+.+....+++...+..|.
T Consensus 599 ~~~~~-~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~~ 677 (979)
T 3tsy_A 599 RAKGP-ATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPS 677 (979)
T ss_dssp SCCSC-EEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHCHHHHSSSSCC
T ss_pred cccCC-ceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhcCcccccccCCC
Confidence 44556 99999999999999999999998654444443356666778899999999999998776433333444556788
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHH
Q 016094 92 LDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAV 171 (395)
Q Consensus 92 ~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~a 171 (395)
+..|...+.+...+|+.+|+++||+++|+++++||.||+++++++..|+.+.+|+++||+++...++++++++|+|++.|
T Consensus 678 ~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~A 757 (979)
T 3tsy_A 678 LNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTV 757 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHH
Confidence 99999999999999999999999999999999999999999777889999999999999986532268999999999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCC
Q 016094 172 IRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPN 251 (395)
Q Consensus 172 l~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~ 251 (395)
|.+|.++|++|.+++||||++|.++..+.+............++|||||+|+||++.+.... ....+.....+....+.
T Consensus 758 l~~A~~~i~sG~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~-~~~~~~~~~~~~~~~~~ 836 (979)
T 3tsy_A 758 LRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISI-ERPLFQLVSAAQTFIPN 836 (979)
T ss_dssp HHHHHHHHHTSTTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSS-CCCCEEEEEEEEEECTT
T ss_pred HHHHHHHHHhCCCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCCccc-cCcceEEEeeeeEEecC
Confidence 99999999999999999999999876554332222334456789999999999998765432 11345555554455555
Q ss_pred CCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHH
Q 016094 252 TENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASR 330 (395)
Q Consensus 252 ~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~ 330 (395)
......+.....+..+.+++++++++.+.+.++++++|+++|+++ +|| +|++||+|.++++.++++||++++|++.+|
T Consensus 837 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~-~did~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~ 915 (979)
T 3tsy_A 837 SAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISD-WNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATR 915 (979)
T ss_dssp CTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHH
T ss_pred chhheEEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCC-cccceEEECCCChHHHHHHHHHcCCChHHHHHHH
Confidence 555555666666666667899999999999999999999999998 999 999999999999999999999999999988
Q ss_pred HHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 331 YALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 331 ~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
.++++||||++||+|++|++++++...-++++.|.+.|++++++||+|++|++++|||.+.
T Consensus 916 ~~l~~~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~~ 976 (979)
T 3tsy_A 916 HVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPM 976 (979)
T ss_dssp HHHHHHCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCBC
T ss_pred HHHHHcCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhccc
Confidence 8899999999999999999988751111234455445667999999999999999999764
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-49 Score=385.01 Aligned_cols=314 Identities=15% Similarity=0.089 Sum_probs=243.7
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechh--hhhcCCCCcCCCCCCHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEE--ILKENPNMSCYKAPSLDA 94 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~--~~~~~~~~~~~~~~~~~~ 94 (395)
+++|.++|+|+|+++++|+++... +.. .++.+++||++||++.+.| .
T Consensus 5 ~v~I~g~g~ylP~~~~~~~~~~~~---~~~-----------~~~~~~tGi~~r~~a~~~e~~~----------------- 53 (357)
T 3s3l_A 5 NLFVSGVAAWLPPLSTAQDAVMAG---LLD-----------PARSKLRGIESVTVASDAEEDA----------------- 53 (357)
T ss_dssp SCEEEEEEEECCCEEEHHHHHHTT---SSC-----------HHHHHHHCCCEEECCCSSGGGS-----------------
T ss_pred ceEEEEEEEECCCCCCHHHHHHhc---CCc-----------HHHHHHcCceEEEecCCCCCCC-----------------
Confidence 489999999999988777765432 211 2335889999999986554 3
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVI 172 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al 172 (395)
..+|+++|+++||+++|+++++||+||+++++. ...++.+.+|+.+||+++.+ +++++++|+|++.||
T Consensus 54 --------~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~--~~~v~~aC~~~~~al 123 (357)
T 3s3l_A 54 --------PPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVP--AFGLAQRCNGGMGAI 123 (357)
T ss_dssp --------HHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSSSC--EEEEECGGGHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCCCc--EEEEcCccHHHHHHH
Confidence 899999999999999999999999999999852 22346799999999998655 899999999999999
Q ss_pred HHHHHHHHcCCCC--eEEEEEeccccc-ccCCCCchhhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecce-
Q 016094 173 RHAKDIAENNPGA--RVLVVCCDITVL-HFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQM- 247 (395)
Q Consensus 173 ~~A~~ll~~g~~~--~vLvv~~e~~s~-~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~- 247 (395)
.+|.++|++|+.+ +||||++|.++. .+.++.+ + +..+|||||+|+||++.+.. ++ ..+.+...+..
T Consensus 124 ~~A~~~i~sg~~~~~~vLvvg~e~~s~~~~~~~~~-----~-~~~lfGDGA~A~vl~~~~~~~~i---~~~~~~s~g~~~ 194 (357)
T 3s3l_A 124 ELAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNS-----V-DVTMYGDGAAALVLSTRDGFARV---LSTATGVDNSLE 194 (357)
T ss_dssp HHHHHHHHTTSSSSSEEEEEEEECCCTTTCCTTTS-----S-SSCCBCCEEEEEEEESSCCSEEE---EEEEEEECGGGG
T ss_pred HHHHHHHHcCCCCCCEEEEEEEecccccccccccc-----c-CCcccccccEEEEEecCCCCCeE---EEEEEEEccChh
Confidence 9999999999998 999999999994 3332322 1 46899999999999987643 11 12333333321
Q ss_pred -ecCCCCCcee------eeEecCce-eEE--eCCcc-hH-HHHHhHHHHHHHhhcccCCCCCCce-EEE-EcCCChHHHH
Q 016094 248 -TVPNTENNVV------GHLKEMGW-DYT--LSKDL-PV-IIGKYIDKLLADAMSPIGISDWNSL-FYI-VHPGGKVILD 313 (395)
Q Consensus 248 -~~p~~~~~~~------~~~~~~g~-~~~--~~~~v-~~-~~~~~~~~~i~~~L~~~g~~~~~di-~~i-~H~~~~~~~~ 313 (395)
.++....... ..+..++. .|. .+.++ ++ ++.+.++++++++|+++|+++ +|| +|+ +||+|.. ++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~~hq~~~~-~~ 272 (357)
T 3s3l_A 195 ILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQALEDAGTAI-EDIAHAVIPVSRRGT-GH 272 (357)
T ss_dssp GGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEECCSCCCCS-SC
T ss_pred hhcccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHH-HH
Confidence 1111100000 00111110 000 01222 34 778899999999999999997 999 998 4999999 99
Q ss_pred HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 314 QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 314 ~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
.++++||+|+||++.+ +.++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||...
T Consensus 273 ~~~~~lgl~~ek~~~~--~~~~~GNt~aAsipl~L~~~~~~----g~l~~G---d~vll~~fG~G~t~~a~ll~~~~~ 341 (357)
T 3s3l_A 273 ELHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVEN----ALVQPG---DRVLLFGGGAGYTCTAAVVEILRM 341 (357)
T ss_dssp CHHHHHTSCGGGBTHH--HHHHHCBCTTCHHHHHHHHHHHT----TCCCTT---CEEEEECCBTTTEEEEEEEEECCC
T ss_pred HHHHHcCCCHHHhHHH--hccccccchHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeeEEeccC
Confidence 9999999999999864 56799999999999999999998 899999 999999999999999999999754
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-48 Score=374.96 Aligned_cols=312 Identities=18% Similarity=0.233 Sum_probs=259.3
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
.++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+++.
T Consensus 11 ~~~I~gig~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~R~~~~~~~~------------------- 59 (339)
T 1mzj_A 11 FSRVLGVGSYRPRREVSNKEVCTWI---DST---------EEWIETRTGIRSRRIAEPDET------------------- 59 (339)
T ss_dssp EEEEEEEEEECCSCEEEHHHHTTTS---SCC---------HHHHHHHHCCSEEECCCTTCC-------------------
T ss_pred ceEEEEEEEeCCCccccHHHHHHHh---CCC---------HHHHHHhcCceEEEEeCCCCC-------------------
Confidence 4899999999999999999998763 212 368999999999999865553
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
..+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+|+.+||+++.+ +++++.+|+|++.||..|
T Consensus 60 ------~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~~~--~~~v~~aCas~~~Al~~A 131 (339)
T 1mzj_A 60 ------IQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG--GFDLSAACAGFCHALSIA 131 (339)
T ss_dssp ------HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCCcc--EEEccccchHHHHHHHHH
Confidence 889999999999999999999999999999988 67899999999999998644 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc----eec--
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----MTV-- 249 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----~~~-- 249 (395)
.++|++|.+++|||+++|.++. +.++.+ +...++|||||+|+||++.+...+ ....+.+.+. .+.
T Consensus 132 ~~~i~~G~~~~vLv~g~e~~s~-~~~~~d-----~~~~~~~GdGA~A~vL~~~~~~~i---~~~~~~~~g~~~~~~~~~g 202 (339)
T 1mzj_A 132 ADAVESGGSRHVLVVATERMTD-VIDLAD-----RSLSFLFGDGAGAAVVGPSDVPGI---GPVVRGIDGTGLGSLHMSS 202 (339)
T ss_dssp HHHHHHSSCSCEEEEEEEEGGG-GSCSSC-----TTTTTTBCEEEEEEEEEEESSCCB---CCCEEEECGGGGGGEEESC
T ss_pred HHHHHCCCCCEEEEEEEccccc-ccCccc-----cccceEeccCceEEEEEecCCCCe---EEEEEEEcCCCCCeEEecC
Confidence 9999999999999999999886 334432 335789999999999998754322 1122333322 111
Q ss_pred --CCCCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-
Q 016094 250 --PNTENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE- 324 (395)
Q Consensus 250 --p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e- 324 (395)
|...+.+. ...+ .+.+ ++++++++.+.+.++++++|+++|+++ +|| +|++||.|.++++.+++.||++++
T Consensus 203 ~~p~~~~~~~---~~~~-~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~did~v~~H~~~~~~~d~i~~~lg~~~~~ 277 (339)
T 1mzj_A 203 SWDQYVEDPS---VGRP-ALVMDGKRVFRWAVADVVPAAREALEVAGLTV-GDLVAFVPHQANLRIIDVLVDRLGVPEHV 277 (339)
T ss_dssp CHHHHTTCSS---SCSC-CEEECHHHHHHHHHHHHHHHHHHHHHTTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCTTS
T ss_pred CCCCcccccc---cccc-eEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCccc
Confidence 21111000 0111 2344 678999999999999999999999997 999 999999999999999999999999
Q ss_pred cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 325 KLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 325 k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
+++.+ +++|||+++|++|++|.+++++ +++++| |+|++++||+|++|++++|||...
T Consensus 278 ~~~~~---~~~~Gn~~sAs~~~~L~~~~~~----g~~~~G---~~vll~~~G~G~t~~~~~l~~~~~ 334 (339)
T 1mzj_A 278 VVSRD---AEDTGNTSSASVALALDRLVRS----GAVPGG---GPALMIGFGAGLSYAGQALLLPDP 334 (339)
T ss_dssp EECCT---HHHHCBCTTHHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCCC
T ss_pred eeeeh---hhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeCCC
Confidence 98864 7899999999999999999998 889999 999999999999999999999754
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-47 Score=368.72 Aligned_cols=313 Identities=20% Similarity=0.224 Sum_probs=254.4
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
.++|.++|+|+|+++++|+++.+.+ ..+ .+||.+++||++||++.+ +.
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~R~~~~~-~~------------------- 52 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAEL---DTS---------DAWISSRTGVRQRHIAGD-LG------------------- 52 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHT---TCC---------HHHHHHHHCCCEEECCTT-CC-------------------
T ss_pred eeEEEEEEEECCCcEecHHHHHHHh---CCC---------HHHHHHhhCceEEEecCC-CC-------------------
Confidence 4899999999999999999998774 222 368999999999999854 32
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
..+|+.+|+++||+++|+ ++||.||++++++ +..|+.+.+|+.+||+++.+ +++++++|+|++.||..|
T Consensus 53 ------~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~--~~~v~~aCas~~~Al~~A 122 (331)
T 2x3e_A 53 ------SGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVGAL--AFDLSAAATGFVYGLASV 122 (331)
T ss_dssp ------HHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTTSE--EEEEECGGGHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCc--EEEEcCcChHHHHHHHHH
Confidence 889999999999999999 8999999999888 66788999999999998644 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecc----eecC
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQ----MTVP 250 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~----~~~p 250 (395)
.++|++|.+++|||+++|.++. +.++.+ +...++|||||+|+||++.+.. +. ......+...+. ...|
T Consensus 123 ~~~i~~g~~~~vLv~g~e~~s~-~~~~~d-----~~~~~~~GdGA~A~vL~~~~~a~~~-~i~~~~~~~dg~~~~~~~~p 195 (331)
T 2x3e_A 123 GSLISAGLADSALLVGVDTFSH-TLDPAD-----RSTRALFGDGAGAVVLRAGDAEEEG-ALLAFDLGSDGHQFDLLMTP 195 (331)
T ss_dssp HHHHHTTSCSEEEEEEEECGGG-GSCTTC-----HHHHHHBCCEEEEEEEEEECTTSTT-BEEEEEEEECGGGTTSEEEE
T ss_pred HHHHHcCCCCEEEEEEeecccc-CCCccc-----cccceeeccccEEEEEEecCCCCCC-ceEEEEEEEcCCCCCeEEec
Confidence 9999999999999999999886 434432 3467899999999999987521 10 000112222221 1112
Q ss_pred CCCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchH
Q 016094 251 NTENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGA 328 (395)
Q Consensus 251 ~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~ 328 (395)
.............++ +.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||.|.++++.+++.||++++|++.
T Consensus 196 ~~~~~~p~~~~~~~~-~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~ 273 (331)
T 2x3e_A 196 AVSRAERSSGQASNY-FRMDGKAVFGQAVTQMSDSVRRVLDRVGWQA-SDLHHLVPHQANTRILAAVADQLDLPVERVVS 273 (331)
T ss_dssp CCCHHHHHHTCCCCC-CEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHHHHHTCCGGGBCC
T ss_pred CCCCCCCCccCcCce-EEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHHhh
Confidence 110000000001112 233 688999999999999999999999997 999 9999999999999999999999999987
Q ss_pred HHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 329 SRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 329 ~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
+ +.+|||+++|++|++|++++++ +++++| |+|++++||+|++|++++|||++
T Consensus 274 ~---~~~~Gnt~sAs~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~~l~~~~ 325 (331)
T 2x3e_A 274 N---IAEVGNTVAASIPLALAHGLRQ----GILRDG---GNMVLTGFGAGLTWGSVALRWPK 325 (331)
T ss_dssp C---HHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred h---HhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEeHHhhheeeEEEECC
Confidence 5 7999999999999999999998 889999 99999999999999999999964
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-47 Score=366.13 Aligned_cols=308 Identities=22% Similarity=0.319 Sum_probs=255.8
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+++.
T Consensus 3 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~~-------------------- 50 (317)
T 1hnj_A 3 TKIIGTGSYLPEQVRTNADLEKMV---DTS---------DEWIVTRTGIRERHIAAPNET-------------------- 50 (317)
T ss_dssp EEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECCTTCC--------------------
T ss_pred cEEEEEEEeCCCceecHHHHHHHh---CCC---------HHHHHHHhCceEEEecCCCCC--------------------
Confidence 789999999999999999998753 211 368899999999999865553
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++|+++++||.|+++++++ +..|..+.+++..||+++.+ +++++.+|+|++.||..|.
T Consensus 51 -----~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aCas~~~al~~A~ 123 (317)
T 1hnj_A 51 -----VSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--AFDVAAACAGFTYALSVAD 123 (317)
T ss_dssp -----HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--EEEECCGGGHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCe--EEeeCcccHHHHHHHHHHH
Confidence 889999999999999999999999999999988 67889999999999998644 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc----eecCCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----MTVPNT 252 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----~~~p~~ 252 (395)
++|++|.+++|||+++|.++. ..+|. ++..+++|||||+|+||++.+..++ ....+...+. .+.|..
T Consensus 124 ~~i~~g~~~~vlv~g~e~~s~-~~~~~-----d~~~~~~~GdGA~A~vL~~~~~~~i---~~~~~~~~g~~~~~~~~~~~ 194 (317)
T 1hnj_A 124 QYVKSGAVKYALVVGSDVLAR-TCDPT-----DRGTIIIFGDGAGAAVLAASEEPGI---ISTHLHADGSYGELLTLPNA 194 (317)
T ss_dssp HHHHTTSCSEEEEEEEECHHH-HSCTT-----CHHHHTTBCCEEEEEEEEEESSCSE---EEEEEEECGGGGGGEECCCC
T ss_pred HHHHCCCCCEEEEEEechhcc-cCCch-----hcccceeeccccEEEEEEecCCCce---eeEEEEEcCCCCCeEEECCC
Confidence 999999999999999999886 33443 2345789999999999998764321 0112222221 122321
Q ss_pred CCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHH
Q 016094 253 ENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASR 330 (395)
Q Consensus 253 ~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~ 330 (395)
..... ...+ .+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||.|.++++.+.+.||++++++..
T Consensus 195 -~~~~~--~~~~-~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~-~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~-- 267 (317)
T 1hnj_A 195 -DRVNP--ENSI-HLTMAGNEVFKVAVTELAHIVDETLAANNLDR-SQLDWLVPHQANLRIISATAKKLGMSMDNVVV-- 267 (317)
T ss_dssp -CSSCT--TSCC-SCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCEEEECCSCHHHHHHHHHHTTCCGGGBCC--
T ss_pred -CCCCC--CCCc-eEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHh--
Confidence 00000 0111 1233 678899999999999999999999997 999 9999999999999999999999999876
Q ss_pred HHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 331 YALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 331 ~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
++.++||+++|++|++|.+++++ +++++| |+|++++||+|++|++++|||
T Consensus 268 -~~~~~Gn~~~As~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 268 -TLDRHGNTSAASVPCALDEAVRD----GRIKPG---QLVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp -CHHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred -hHhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhheeEEEEEEC
Confidence 48999999999999999999998 889999 999999999999999999997
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=358.45 Aligned_cols=303 Identities=22% Similarity=0.311 Sum_probs=255.1
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+ ... .+|+.+++||++|+++.+++.
T Consensus 3 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~gi~~r~~~~~~~~-------------------- 50 (313)
T 1zow_A 3 VGIKGFGAYAPEKIIDNAYFEQFL---DTS---------DEWISKMTGIKERHWADDDQD-------------------- 50 (313)
T ss_dssp EEEEEEEEECCSCEEEGGGGGGTS---SCC---------HHHHHHHHCCSEEECCCTTCC--------------------
T ss_pred eEEEEEEEECCCccccHHHHHHhc---CCC---------HHHHHHhhCceEEEecCCCCC--------------------
Confidence 789999999999999999998753 211 258999999999999866653
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+++.+||+++.+ +++++.+|+|++.||..|.
T Consensus 51 -----~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aCas~~~al~~A~ 123 (313)
T 1zow_A 51 -----TSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVA--SMDQLAACSGFMYSMITAK 123 (313)
T ss_dssp -----HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCSCC--EEEEECGGGHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EEEECCcCHHHHHHHHHHH
Confidence 889999999999999999999999999999888 77889999999999998644 7889999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc----eecCCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----MTVPNT 252 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----~~~p~~ 252 (395)
++|++|.+++|||+++|.++. +.+|.+ +..+++|||||+|+||++.+... ......+.+.+. ...|..
T Consensus 124 ~~i~~g~~~~vLv~g~e~~s~-~~~~~d-----~~~~~~~gdGa~A~vl~~~~~~~--~i~~~~~~~~g~~~~~~~~~~~ 195 (313)
T 1zow_A 124 QYVQSGDYHNILVVGADKLSK-ITDLTD-----RSTAVLFGDGAGAVIIGEVSEGR--GIISYEMGSDGTGGKHLYLDKD 195 (313)
T ss_dssp HHHHTTSCSCEEEEEEEEGGG-TCCTTC-----HHHHTTBCEEEEEEEEEECSTTC--EEEEEEEEECGGGGGGEEECTT
T ss_pred HHHHCCCCCEEEEEEEccccc-ccCccc-----ccceeeeccceEEEEEEecCCCC--ceeEEEEEEcCCCcCeEEecCC
Confidence 999999999999999999886 334543 33578999999999999876421 000112222221 111210
Q ss_pred CCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHH
Q 016094 253 ENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASR 330 (395)
Q Consensus 253 ~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~ 330 (395)
+. .+.+ ++++++...+.+.++++++|+++|+++ +|| +|++||.+.++++.+.+.||+++++++.+
T Consensus 196 ----------~~-~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~- 262 (313)
T 1zow_A 196 ----------TG-KLKMNGREVFKFAVRIMGDASTRVVEKANLTS-DDIDLFIPHQANIRIMESARERLGISKDKMSVS- 262 (313)
T ss_dssp ----------TC-CEEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC-
T ss_pred ----------CC-eeEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHh-
Confidence 00 1333 567888888899999999999999997 999 99999999999999999999999998864
Q ss_pred HHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEec
Q 016094 331 YALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 331 ~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
+.++||+++|++|++|.+++++ +++++| |++++++||+|++|++++|||.
T Consensus 263 --~~~~Gh~~~as~~~~L~~~~~~----~~~~~g---~~vl~~~~G~G~t~~~~~l~~~ 312 (313)
T 1zow_A 263 --VNKYGNTSAASIPLSIDQELKN----GKLKDD---DTIVLVGFGGGLTWGAMTIKWG 312 (313)
T ss_dssp --HHHHCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEECC
T ss_pred --HhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence 8999999999999999999998 889999 9999999999999999999995
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-46 Score=358.56 Aligned_cols=312 Identities=20% Similarity=0.236 Sum_probs=255.0
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+++.
T Consensus 13 ~~I~g~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~gi~~r~~~~~~~~-------------------- 60 (335)
T 1u6e_A 13 VGLLSVGAYRPERVVTNDEICQHI---DSS---------DEWIYTRTGIKTRRFAADDES-------------------- 60 (335)
T ss_dssp EEEEEEEEECCSEEEEHHHHTTSS---SCC---------HHHHHHHHCCSEEEECCTTCC--------------------
T ss_pred eEEEEEEEECCCceecHHHHHHHh---CCC---------HHHHHHhcCCceEeecCCCCC--------------------
Confidence 899999999999999999998753 222 268999999999999876653
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+|+.+||+++.+ +++++.+|+|++.||..|.
T Consensus 61 -----~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aC~s~~~al~~A~ 133 (335)
T 1u6e_A 61 -----AASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGIL--GFDLSAGAAGFGYALGAAA 133 (335)
T ss_dssp -----HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCTTSE--EEEEECGGGHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--EeeeccccHHHHHHHHHHH
Confidence 889999999999999999999999999999988 77899999999999997544 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc----eecCCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ----MTVPNT 252 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~----~~~p~~ 252 (395)
++|++|.+++|||+++|.++. +.+|.+ +...++|||||+|+||++.+..++ ....+...+. ...|..
T Consensus 134 ~~i~~g~~~~vLv~g~e~~s~-~~~~~d-----~~~~~~~gDGA~A~vl~~~~~~~i---~~~~~~~~g~~~~~~~~~~~ 204 (335)
T 1u6e_A 134 DMIRGGGAATMLVVGTEKLSP-TIDMYD-----RGNCFIFADGAAAVVVGETPFQGI---GPTVAGSDGEQADAIRQDID 204 (335)
T ss_dssp HHHHHTSCSSEEEEEEEECGG-GCCTTC-----TTTTTTBCEEEEEEEEEECSSCCB---CCCEEEECGGGGGGEEESSC
T ss_pred HHHHcCCCCEEEEEEEccccc-ccCccc-----cccceEeccccEEEEEEecCCCCe---eEEEEEEcCCcccceeecCC
Confidence 999999999999999999986 434533 235789999999999998764221 1112222221 111110
Q ss_pred CCceeeeEecCc--eeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-cch
Q 016094 253 ENNVVGHLKEMG--WDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKE-KLG 327 (395)
Q Consensus 253 ~~~~~~~~~~~g--~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~e-k~~ 327 (395)
...+...+.+ ..+.+ +++++++..+.+.++++++|+++|+++ +|| +|++||.+..+++.+.+.||++++ ++.
T Consensus 205 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~dId~~~~H~~~~~~~~~~~~~lg~~~~~~~~ 281 (335)
T 1u6e_A 205 --WITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRP-DQIDVFVPHQANSRINELLVKNLQLRPDAVVA 281 (335)
T ss_dssp --HHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCCEEEECCSCHHHHHHHHHHHTCCTTCEEC
T ss_pred --ccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCchhhhh
Confidence 0000000000 12334 567788888889999999999999997 999 999999999999999999999998 776
Q ss_pred HHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 328 ASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 328 ~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
.+ ++++||+++|++|++|.+++++ +++++| |++|+++||+|++|++++|||.+
T Consensus 282 ~~---~~~~Gnt~sAs~~~~L~~~~~~----~~~~~g---~~~l~~~~G~G~t~~~~vl~~~~ 334 (335)
T 1u6e_A 282 ND---IEHTGNTSAASIPLAMAELLTT----GAAKPG---DLALLIGYGAGLSYAAQVVRMPK 334 (335)
T ss_dssp CT---HHHHCBCGGGHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred hh---hhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEeCC
Confidence 64 8999999999999999999988 888999 99999999999999999999953
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=353.95 Aligned_cols=312 Identities=18% Similarity=0.280 Sum_probs=254.5
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+++.
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~~-------------------- 49 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYL---DTS---------DEWIVTRTGIKERRVAAEDEY-------------------- 49 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEEECCTTCC--------------------
T ss_pred cEEEEEEEECCCceecHHHHHHHh---CCC---------HHHHHHhcCceEEeecCCCCC--------------------
Confidence 689999999999999999998753 211 368999999999999865553
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+++.+||+ ..+ +++++.+|+|++.||..|.
T Consensus 50 -----~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl-~~~--~~~v~~aCas~~~al~~A~ 121 (322)
T 1ub7_A 50 -----TSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAF--AYDLLAGCPGWIYALAQAH 121 (322)
T ss_dssp -----HHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCE--EEEEECSTTHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC-CCE--EEeeCccchHHHHHHHHHH
Confidence 889999999999999999999999999999888 5678899999999999 444 7889999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecc----eecCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQ----MTVPN 251 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~----~~~p~ 251 (395)
++|++|.+++|||+++|.++. +.+|.+ +...++|||||+|+||++.+.. .+ ....+...+. .+.|.
T Consensus 122 ~~i~~g~~~~vlv~g~e~~s~-~~~~~d-----~~~~~~~GdGA~A~vL~~~~~~~~i---~~~~~~~~g~~~~~~~~~~ 192 (322)
T 1ub7_A 122 ALVEAGLAQKVLAVGAEALSK-IIDWND-----RATAVLFGDGGGAAVVGKVREGYGF---RSFVLGADGTGAKELYHAC 192 (322)
T ss_dssp HHHHTTSCSEEEEEEEECGGG-TSCTTC-----HHHHTTBCCEEEEEEEECCCTTCEE---EEEEEEECGGGCTTEEEES
T ss_pred HHHHcCCCCEEEEEEechhcc-ccChhh-----cccceeeccccEEEEEEecCCCCce---eEEEEEEecCCCCeEEeCC
Confidence 999999999999999999886 444532 3467899999999999987542 11 0112222221 11111
Q ss_pred CCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHH
Q 016094 252 TENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGAS 329 (395)
Q Consensus 252 ~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~ 329 (395)
............++ +.+ ++++++++.+.+.++++++|+++|+++ +|| +|++||.+.++++.+.+.||+++++++.
T Consensus 193 ~~~~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~- 269 (322)
T 1ub7_A 193 VAPRLPDGTSMKNR-LYMNGREVFKFAVRVMNTATLEAIEKAGLTP-EDIRLFVPHQANLRIIDAARERLGLPWERVAV- 269 (322)
T ss_dssp SCSBCTTSCBCCSS-CEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHTTTCCGGGBCC-
T ss_pred CCCCCCccccccce-EEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHH-
Confidence 10000000001111 233 678899888999999999999999997 999 9999999999999999999999999886
Q ss_pred HHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 330 RYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 330 ~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
++.++||+++|+++++|.+++++ +++++| +++++.+||.|++|++++|||++
T Consensus 270 --~~~~~Gh~~~As~~~~l~~~l~~----g~~~~g---~~~l~~~~G~G~~~~~~vl~~~~ 321 (322)
T 1ub7_A 270 --NVDRYGNTSTASIPLALKEAVDA----GRIREG---DHVLLVSFGAGLTWAAAVLTWGG 321 (322)
T ss_dssp --CHHHHCBCGGGHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred --HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEChhheeEEEEEEeCC
Confidence 48999999999999999999998 889999 99999999999999999999953
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-47 Score=370.57 Aligned_cols=307 Identities=16% Similarity=0.120 Sum_probs=249.9
Q ss_pred CceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHH
Q 016094 16 PSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDAR 95 (395)
Q Consensus 16 ~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
++++|.++|+|+|+++++|+++++.+ ..+ .+|+.+.+||++|+++.++++
T Consensus 6 m~v~I~~~g~y~P~~~v~~~~l~~~~---g~~---------~~~~~~~~Gi~~r~~~~~~e~------------------ 55 (388)
T 3v4n_A 6 MTIGIDKISFFVPPYYIDMTALAEAR---NVD---------PGKFHIGIGQDQMAVNPISQD------------------ 55 (388)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHHHT---TSC---------THHHHTTTCCCEEECCCTTCC------------------
T ss_pred eeEEEEEEEEECCCeEEcHHHHHHHh---CCC---------HHHHHHHhCceEEEECCCCCC------------------
Confidence 35999999999999999999999874 222 257888999999999877764
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHH
Q 016094 96 HAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRH 174 (395)
Q Consensus 96 ~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~ 174 (395)
..+|+++|+++||+++| +++||+||++|+++ +..|+.+.+|+++||+++... +++++++|+|++.||..
T Consensus 56 -------~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~-~~dv~~aC~gg~~AL~~ 125 (388)
T 3v4n_A 56 -------IVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFAR-SFEIKEAXYGATAGLQL 125 (388)
T ss_dssp -------HHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCE-EEEEESGGGHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCce-EeehhhhhhHHHHHHHH
Confidence 89999999999999997 99999999999999 779999999999999987343 88999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCC
Q 016094 175 AKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTEN 254 (395)
Q Consensus 175 A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~ 254 (395)
|..+|++|+.++||||++|.++..+ ++. ...+|||||+|+||++++.- ..+.....+. +.+
T Consensus 126 A~~~i~sg~~~~vLVvg~e~~s~~~-~~~--------~~~lfGDGA~A~ll~~~~~i-----l~~~~~~~~~-----~~~ 186 (388)
T 3v4n_A 126 AKNHVALHPDKKVLVVAADIAKYGL-NSG--------GEPTQGAGAVAMLVSSEPRI-----LALKEDNVML-----TQD 186 (388)
T ss_dssp HHHHHHHCTTCEEEEEEEEEECCCT-TCT--------TGGGCEEEEEEEEEEESCSS-----EEECSCCEEE-----ECC
T ss_pred HHHHHhcCCCCEEEEEEehhhcccC-CCC--------CCCccccceeEEEeecCCCc-----eEEecccccc-----chh
Confidence 9999999999999999999998633 332 14789999999999997531 0111111111 111
Q ss_pred cee-eeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCC--------hHHH----HHHHHHcC
Q 016094 255 NVV-GHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGG--------KVIL----DQVEQNLG 320 (395)
Q Consensus 255 ~~~-~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~--------~~~~----~~i~~~lg 320 (395)
.+. |......+....++.+++.+.+.++++++++|+++|+++ +|| +|++||++ .+++ +.+++.|+
T Consensus 187 ~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~-~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~ 265 (388)
T 3v4n_A 187 IYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDF-ADYDALAFHIPYTKMGKKALLAKISDQTEAEQERIL 265 (388)
T ss_dssp CCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCG-GGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHH
T ss_pred ccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCH-HHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhC
Confidence 111 111111122223677888899999999999999999997 999 99999955 4555 77889999
Q ss_pred CCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 321 LGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 321 i~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
++.+|... ++++||||++||+|++|++++++. |++++| |+|++++||+|+++..+.+++.+.
T Consensus 266 ~~~e~~~~---~~~~~GN~~sASi~l~L~~~l~~~---g~~~~G---d~ill~s~GsG~~ae~~~~~v~~~ 327 (388)
T 3v4n_A 266 ARYEESII---YSRRVGNLYTGSLYLGLISLLENA---TTLTAG---NQIGLFSYGSGAVAEFFTGELVAG 327 (388)
T ss_dssp HHHHHHTT---TGGGTCCCGGGHHHHHHHHHHHHC---SSCCTT---CEEEEEEEETTTEEEEEEEEECTT
T ss_pred CCHHHHhh---HHHhcCchHHHHHHHHHHHHHHhc---CcCCCC---CEEEEEEecCcceeEEEEEEEccC
Confidence 99999876 599999999999999999999851 468999 999999999999999999999754
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-45 Score=348.97 Aligned_cols=304 Identities=19% Similarity=0.280 Sum_probs=251.7
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++.+.+ ... .+|+.+++||++||++.+ +.
T Consensus 3 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~-~~-------------------- 49 (309)
T 2ebd_A 3 TKIIGTGVYLPKNVLTNFDLEKIV---DTS---------DEWITTRTGIKERRIAKE-ET-------------------- 49 (309)
T ss_dssp EEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECSS-CC--------------------
T ss_pred eEEEEEEEECCCceEcHHHHHHHc---CCC---------HHHHHHHhCceeeeecCC-CC--------------------
Confidence 799999999999999999998653 111 368899999999999854 32
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+++.+||+++.+ +++++++|+|++.||..|.
T Consensus 50 -----~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~~C~s~~~al~~A~ 122 (309)
T 2ebd_A 50 -----ITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVY--AFDISAACSGFIYALDIAD 122 (309)
T ss_dssp -----HHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCce--EEecCccchHHHHHHHHHH
Confidence 889999999999999999999999999999888 67889999999999998744 7889999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCce
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNV 256 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 256 (395)
++|++|.+++|||+++|.++. +.+|.+ +...++|||||+|+||++.+... ......+...+.. .+.+
T Consensus 123 ~~i~~g~~~~vlv~g~e~~s~-~~~~~~-----~~~~~~~gdGaaA~vL~~~~~~~--~i~~~~~~~~g~~-----~~~~ 189 (309)
T 2ebd_A 123 SFIKSGKAKNVLVIGAEKLSE-AVDWED-----RSTCVLFGDGAGAVVVTRSEDKS--DILATRMYAEGSL-----EELL 189 (309)
T ss_dssp HHHHTTSCSEEEEEEEEEGGG-TCCTTC-----TTTTTTBCEEEEEEEEEECSSSC--EEEEEEEEECGGG-----GGGE
T ss_pred HHHHCCCCCEEEEEEeccccc-ccCccc-----hhhccccccccEEEEEEecCCCC--ceeEEEEEecCCc-----ccee
Confidence 999999999999999999886 334432 33578999999999999876421 0001111111110 0111
Q ss_pred eeeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHH
Q 016094 257 VGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALS 334 (395)
Q Consensus 257 ~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~ 334 (395)
. ....+ .+.+ ++++++...+.+.++++++|+++|+++ +|| ++++|+.+.++++.+.+.||+++++++.+ +.
T Consensus 190 ~--~p~~~-~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~~~~~~~lg~~~~~~~~~---~~ 262 (309)
T 2ebd_A 190 H--ADNCG-YIRMKGRELFKVAVRSMEEVCREVLEKAGVKP-EEVSLVIPHQANVRIINALAEKLNIPKEKVFVN---IQ 262 (309)
T ss_dssp E--ECTTC-CEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC---HH
T ss_pred E--eCCCC-eEEEccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh---Hh
Confidence 1 11111 1233 567888888899999999999999997 999 99999999999999999999999998864 89
Q ss_pred hcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 335 EYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 335 ~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
++||+++|+++++|.+++++ +++++| |++++++||+|++|++++|||
T Consensus 263 ~~Gh~~~As~~~~L~~~~~~----g~~~~G---~~~l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 263 KYGNTSAASIPIALHEAIKE----GKVKRG---DLILMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp HHCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred hhcchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEC
Confidence 99999999999999999998 889999 999999999999999999997
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=356.26 Aligned_cols=306 Identities=18% Similarity=0.153 Sum_probs=248.3
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
+++|.++|+|+|+++++|+++++.. ..+ .+|+.+++||++|+++.+++.
T Consensus 2 ~v~I~~ig~y~P~~~v~~~~l~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~e~------------------- 50 (396)
T 1xpm_A 2 AIGIDKINFYVPKYYVDMAKLAEAR---QVD---------PNKFLIGIGQTEMAVSPVNQD------------------- 50 (396)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT---TSC---------HHHHHTTTCCSEEEECCTTCC-------------------
T ss_pred ceEEEEEEEeCCCeEecHHHHHHHh---CCC---------HHHHhhhcCceEEEeCCCCCC-------------------
Confidence 3899999999999999999998764 222 368999999999999876653
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHA 175 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A 175 (395)
..+|+++|+++||++ +++++||.||++|+++ +..|+.+.+|+..||+++... +++++++|+|++.||..|
T Consensus 51 ------~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~aC~sg~~Al~~A 121 (396)
T 1xpm_A 51 ------IVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFAR-CFEMKEACYAATPAIQLA 121 (396)
T ss_dssp ------HHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCE-EEEEESTTTTHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCce-EEEeccccHHHHHHHHHH
Confidence 889999999999988 6899999999999998 678999999999999985333 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe-ecceecCCCCC
Q 016094 176 KDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLS-CSQMTVPNTEN 254 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~-~~~~~~p~~~~ 254 (395)
.++|++|+.++|||+++|..+. ..+. ...++|||||+|+||++++. .+.+.. .+.. +.+
T Consensus 122 ~~~I~sg~~~~vLvvg~e~s~~-~~~~--------~~~~~~GdGA~A~vl~~~~~-------i~~~~~~~g~~----~~d 181 (396)
T 1xpm_A 122 KDYLATRPNEKVLVIATDTARY-GLNS--------GGEPTQGAGAVAMVIAHNPS-------ILALNEDAVAY----TED 181 (396)
T ss_dssp HHHHTTCTTCEEEEEEEEEECC-CTTC--------SSGGGCEEEEEEEEEEESCS-------SEEECSCCEEE----ECC
T ss_pred HHHHHcCCCCEEEEEeehhhcc-ccCC--------CCCcccccceEEEEeccCCc-------eEEEEeccccc----cce
Confidence 9999999999999999997332 1111 14689999999999998642 122211 1111 000
Q ss_pred cee-eeEecCceeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHc-----CCCcccc
Q 016094 255 NVV-GHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNL-----GLGKEKL 326 (395)
Q Consensus 255 ~~~-~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~l-----gi~~ek~ 326 (395)
.+. |.....+ .+.+ ++.+++++.+.++++++++|+++|+++ +|| +|++||+|.++.+.+.+.| +++++|+
T Consensus 182 ~~~~~~p~~~~-~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~-~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~ 259 (396)
T 1xpm_A 182 VYDFWRPTGHK-YPLVDGALSKDAYIRSFQQSWNEYAKRQGKSL-ADFASLCFHVPFTKMGKKALESIIDNADETTQERL 259 (396)
T ss_dssp CCSEECBTTCS-SCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHH
T ss_pred EEEeeccCCCC-CeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEecCCchHHHHHHHHHHHhhcccCCHHHH
Confidence 000 1111111 1223 567888889999999999999999997 999 9999999999999999998 8898887
Q ss_pred hHH----HHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 327 GAS----RYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 327 ~~~----~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
..+ |.+++++|||++||+|++|++++++ +++++| |+|++++||+|++++++++++.+.
T Consensus 260 ~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~----~~l~~G---d~ill~s~GsG~~~~~~~~~v~~~ 321 (396)
T 1xpm_A 260 RSGYEDAVDYNRYVGNIYTGSLYLSLISLLEN----RDLQAG---ETIGLFSYGSGSVGEFYSATLVEG 321 (396)
T ss_dssp HHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHH----SCCCTT---CEEEEEEEETTTEEEEEEEEECTT
T ss_pred HHHhhhhhhhhhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEECcchhheEEEEEEccc
Confidence 653 1123999999999999999999998 889999 999999999999999999999853
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=355.60 Aligned_cols=308 Identities=18% Similarity=0.171 Sum_probs=245.1
Q ss_pred ceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHH
Q 016094 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARH 96 (395)
Q Consensus 17 ~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
+++|.++|+|+|+++++|+++++.. ..+ .+|+...+|+++|+++.+++.
T Consensus 3 ~v~I~~ig~y~P~~~v~~~~l~~~~---g~~---------~~~~~~g~G~~~~~~~~~~e~------------------- 51 (450)
T 2f82_A 3 NVGILAMDIYFPPTCVQQEALEAHD---GAS---------KGKYTIGLGQDCLAFCTELED------------------- 51 (450)
T ss_dssp SCEEEEEEEECCSEEEEHHHHHHHT---TCC---------TTTTTTTSCCCEEECCCTTCC-------------------
T ss_pred ceEEEEEEEECCCeeccHHHHHHHh---CCC---------HHHhhhhhCceeeeeCCCCCC-------------------
Confidence 3899999999999999999999874 222 146777889999888766653
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCC---CCccccceeeccccchHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGL---EPSVNRLMIYSQGCYMGGAVI 172 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl---~~~~~~~~~i~~~C~s~~~al 172 (395)
..+|+++|+++||+++|+++++||.||++|+++ +..|+.+.+|++.||+ +... +++++++|+|++.||
T Consensus 52 ------~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~--~~~v~~aC~gg~~AL 123 (450)
T 2f82_A 52 ------VISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVE--GVDSTNACYGGTAAL 123 (450)
T ss_dssp ------HHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCB--CCEECSGGGHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCce--EEEhhhhhHHHHHHH
Confidence 889999999999999999999999999999998 7789999999999999 4443 899999999999999
Q ss_pred HHHHHHHHcCCC--CeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecC
Q 016094 173 RHAKDIAENNPG--ARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVP 250 (395)
Q Consensus 173 ~~A~~ll~~g~~--~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p 250 (395)
.+|.++|++|+. ++||||++|.++ +. + +....+|||||+|+||++++.. .+.....+... .
T Consensus 124 ~~A~~~I~sg~~~~~~vLVvg~e~~~--~~---~-----~~~~~~fGDGA~A~ll~~~~~~------~~~~~~~g~~~-~ 186 (450)
T 2f82_A 124 LNCVNWVESNSWDGRYGLVICTDSAV--YA---E-----GPARPTGGAAAIAMLIGPDAPI------VFESKLRGSHM-A 186 (450)
T ss_dssp HHHHHHHHSTTCCSCEEEEEEEEEEC--CS---S-----STTGGGCEEEEEEEEEESSCSE------EEEEEEEEEEE-C
T ss_pred HHHHHHHHcCCCcCCeEEEEEeeecc--cc---C-----CCCCcccccceEEEEeccCCce------EEEeccceeeh-h
Confidence 999999999986 999999999975 22 1 1246899999999999986531 12221111110 0
Q ss_pred CCCCceeeeEecCce-eEEe-CCcchHHHHHhHHHHHHHhhc------ccCCCCCCce-EEEEcCCChHHHHHHHHHcC-
Q 016094 251 NTENNVVGHLKEMGW-DYTL-SKDLPVIIGKYIDKLLADAMS------PIGISDWNSL-FYIVHPGGKVILDQVEQNLG- 320 (395)
Q Consensus 251 ~~~~~~~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~------~~g~~~~~di-~~i~H~~~~~~~~~i~~~lg- 320 (395)
. .+.+.....+. ...+ ++.+++.+.+.+..+++.+|+ ++|+++ +|| +|++||+|.++++.+.+.|+
T Consensus 187 ~---~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~-~did~~v~Hq~~~~i~~~~~~~L~~ 262 (450)
T 2f82_A 187 H---VYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSI-NDADYFVFHSPYNKLVQKSFARLLY 262 (450)
T ss_dssp C---CCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCG-GGCSEEEECCSSHHHHHHHHHHHHH
T ss_pred h---ccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCCh-hhcCEEEecCChHHHHHHHHHHhcc
Confidence 0 00111111010 1122 566778888889999999996 899997 999 99999999999999999998
Q ss_pred -----------------CCc---------------ccchH-------------HHHHHHhcCCCCcchHHHHHHHHHhhh
Q 016094 321 -----------------LGK---------------EKLGA-------------SRYALSEYGNLGAPSVLFILDDVRKKS 355 (395)
Q Consensus 321 -----------------i~~---------------ek~~~-------------~~~~~~~~Gn~~sasi~~~L~~~~~~~ 355 (395)
+++ ||++. ++.+++++|||++||+|++|++++++
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~l~L~~~l~~- 341 (450)
T 2f82_A 263 NDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHN- 341 (450)
T ss_dssp HHHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHHHHHCCCGGGHHHHHHHHHHHH-
T ss_pred cccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHh-
Confidence 454 44443 22357899999999999999999998
Q ss_pred hhhhc-ccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 356 TEERK-ATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 356 ~~~g~-l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
++ +++| |+|++++||+|++|++++++|.+.
T Consensus 342 ---~~~~~~G---d~ill~s~GsG~~~~~~~l~~~~~ 372 (450)
T 2f82_A 342 ---KHSDLAG---KRVVMFSYGSGSTATMFSLRLCEN 372 (450)
T ss_dssp ---HGGGCTT---CEEEEEEEETTTEEEEEEEEECCC
T ss_pred ---CccCCCC---CEEEEEeecCCcccEEEEEEEeCC
Confidence 74 7889 999999999999999999999854
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=348.85 Aligned_cols=304 Identities=18% Similarity=0.126 Sum_probs=237.2
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
++|.++|+|+|+++++|+++++.. +. + .+|+...+||++|+++.+.+.
T Consensus 25 vgI~aig~y~P~~~v~~~el~~~~-g~--~---------~~~~~~~~Gi~~r~~~~~~e~-------------------- 72 (478)
T 2p8u_A 25 VGIVALEIYFPSQYVDQAELEKYD-GV--D---------AGKYTIGLGQAKMGFCTDRED-------------------- 72 (478)
T ss_dssp CEEEEEEEECCSEEEEHHHHHHHH-TC--C---------TTCCCCCCCCCEEECCCTTCC--------------------
T ss_pred eEEEEEEEECCCeEecHHHHHHHh-CC--C---------hhHhecccCceEEEeCCCCCC--------------------
Confidence 899999999999999999999875 22 2 147788999999999876663
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHH---HcCCCCccccceeeccccchHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMN---LLGLEPSVNRLMIYSQGCYMGGAVIR 173 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~---~LGl~~~~~~~~~i~~~C~s~~~al~ 173 (395)
..+|+++|+++||+++|+++++||+||++|+++ +..|+.+.+|++ .+|+++.. +++++++|+|++.||.
T Consensus 73 -----~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~~~~--~~dv~~aC~gg~~AL~ 145 (478)
T 2p8u_A 73 -----INSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIE--GIDTTNACYGGTAAVF 145 (478)
T ss_dssp -----HHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCCB--CCEEESGGGHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCCCce--EEEEcchhHHHHHHHH
Confidence 899999999999999999999999999999998 789999999994 55556554 8899999999999999
Q ss_pred HHHHHHHcCC--CCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe--ecceec
Q 016094 174 HAKDIAENNP--GARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLS--CSQMTV 249 (395)
Q Consensus 174 ~A~~ll~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~--~~~~~~ 249 (395)
+|..+|++|+ .++||||++|... |.+ .....+|||||+|+||++++.. .+.. .++ ..
T Consensus 146 ~A~~~i~sg~~~~~~aLVV~~Eia~--~~~--------~~~~~~fGdGA~A~Ll~~~~~~--------~l~~~~~gs-~~ 206 (478)
T 2p8u_A 146 NAVNWIESSSWDGRYALVVAGDIAV--YAT--------GNARPTGGVGAVALLIGPNAPL--------IFERGLRGT-HM 206 (478)
T ss_dssp HHHHHHTSTTCCSCEEEEEEEEEEC--CCS--------STTGGGCEEEEEEEEEESSCSE--------EECTTCCEE-EE
T ss_pred HHHHHHHcCCccCCEEEEEEeeeec--ccC--------CCCCCcccceeEEEEEecCCCc--------eEeecccee-cc
Confidence 9999999998 8999999999642 321 1146899999999999986531 1110 111 01
Q ss_pred CCCCCceeeeEecC-ce-eEEe-CCcchH---HHHHhHHHHHHHhhc--------ccCCCCCCce-EEEEcCCChHHHHH
Q 016094 250 PNTENNVVGHLKEM-GW-DYTL-SKDLPV---IIGKYIDKLLADAMS--------PIGISDWNSL-FYIVHPGGKVILDQ 314 (395)
Q Consensus 250 p~~~~~~~~~~~~~-g~-~~~~-~~~v~~---~~~~~~~~~i~~~L~--------~~g~~~~~di-~~i~H~~~~~~~~~ 314 (395)
.+..+ + ..+. +. ...+ ++.+++ ...+.+.+.+++.|+ ++|+++ +|+ +|++||+|.++++.
T Consensus 207 ~~~~d---~-~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~~~-~did~~v~H~~~~ki~~~ 281 (478)
T 2p8u_A 207 QHAYD---F-YKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTL-NDFGFMIFHSPYCKLVQK 281 (478)
T ss_dssp CCCCS---E-ECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCG-GGCSEEEECCSSHHHHHH
T ss_pred cchhh---e-eeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCCCh-HHcCEEEecCCcHHHHHH
Confidence 11100 0 0111 10 1122 344444 334445566777776 789997 999 99999999999999
Q ss_pred HHHHcC------------------------CCc---------c-------------cchHHHHHHHhcCCCCcchHHHHH
Q 016094 315 VEQNLG------------------------LGK---------E-------------KLGASRYALSEYGNLGAPSVLFIL 348 (395)
Q Consensus 315 i~~~lg------------------------i~~---------e-------------k~~~~~~~~~~~Gn~~sasi~~~L 348 (395)
+.+.|+ ++. | |+..++.+++++|||++||+|++|
T Consensus 282 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSi~l~L 361 (478)
T 2p8u_A 282 SLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSL 361 (478)
T ss_dssp HHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTGGGHHHHHHCCCGGGHHHHHH
T ss_pred HHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHHHHHHHHhcCchHHHHHHHHH
Confidence 999998 666 5 433344578999999999999999
Q ss_pred HHHHhhhhhhhc--ccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 349 DDVRKKSTEERK--ATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 349 ~~~~~~~~~~g~--l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
++++++ ++ +.+| |+|++++||+|++|++++++|.+.
T Consensus 362 ~~ll~~----~~~~~~~G---drill~s~GsG~~~~~~~l~~~~~ 399 (478)
T 2p8u_A 362 ASVLAQ----YSPQQLAG---KRIGVFSYGSGLAATLYSLKVTQD 399 (478)
T ss_dssp HHHHHH----SCHHHHTT---CEEEEEEEETTTEEEEEEEEECSC
T ss_pred HHHHHh----CCccCCCC---CEEEEEEEcchhhhEEEEEEEeCC
Confidence 999998 66 7789 999999999999999999999854
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=349.92 Aligned_cols=318 Identities=18% Similarity=0.141 Sum_probs=239.7
Q ss_pred CCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCH
Q 016094 13 SRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSL 92 (395)
Q Consensus 13 ~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 92 (395)
+... |+|.++|.|+|+++++|+|+++.. ..+ .+||.+++||++|+++.++|+
T Consensus 2 m~~~-VgI~~~g~y~P~~~v~~~~l~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~E~--------------- 53 (460)
T 2wya_A 2 MPKD-VGILALEVYFPAQYVDQTDLEKYN---NVE---------AGKYTVGLGQTRMGFCSVQED--------------- 53 (460)
T ss_dssp CCSS-CEEEEEEEECCSEEEEHHHHHHHT---TCC---------TTCCCCCCCCCEEECCCTTCC---------------
T ss_pred CCCc-eEEEEEEEECCCeEEcHHHHHHHh---CCC---------HHHHHHhhCcEEEEECCCCCC---------------
Confidence 4455 999999999999999999998873 222 258889999999999988874
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCcc-ccceeeccccchHHH
Q 016094 93 DARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSV-NRLMIYSQGCYMGGA 170 (395)
Q Consensus 93 ~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~-~~~~~i~~~C~s~~~ 170 (395)
..+||++|+++||+++|++|++||+||++|+|+ +..|++++.|++.||+.... ..+++++++|+||+.
T Consensus 54 ----------~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~ 123 (460)
T 2wya_A 54 ----------INSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTA 123 (460)
T ss_dssp ----------HHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHH
T ss_pred ----------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHH
Confidence 899999999999999999999999999999999 88999999999999754221 127999999999999
Q ss_pred HHHHHHHHHHcCCCCeEEE--EEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe-ecc-
Q 016094 171 VIRHAKDIAENNPGARVLV--VCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLS-CSQ- 246 (395)
Q Consensus 171 al~~A~~ll~~g~~~~vLv--v~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~-~~~- 246 (395)
||.+|..+|++|+.+++++ +.+|. +. +.+ +....+|||||+|+++++++...+ ......... ...
T Consensus 124 al~~A~~~i~~g~~~~~lvvv~~s~~-~~-~~d--------~~~~~~~GdGA~A~l~~~~~~~~~-~~~~~~~~~~~~~d 192 (460)
T 2wya_A 124 SLFNAANWMESSSWDGRYAMVVCGDI-AV-YPS--------GNARPTGGAGAVAMLIGPKAPLAL-ERGLRGTHMENVYD 192 (460)
T ss_dssp HHHHHHHHHTSTTCCSCEEEEEEEEE-EC-CCS--------STTGGGCEEEEEEEEEESSCSEEE-CTTCCEEEECCCCS
T ss_pred HHHHHHHHHHhccccceEEEEEeccc-cc-ccc--------ccccccCcchHHhhhcccCCccee-ecccccccccchhh
Confidence 9999999999998654433 33333 22 322 124578999999999998765321 000000000 000
Q ss_pred eecCCCCCceeeeEecCc----eeEEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcC
Q 016094 247 MTVPNTENNVVGHLKEMG----WDYTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLG 320 (395)
Q Consensus 247 ~~~p~~~~~~~~~~~~~g----~~~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lg 320 (395)
...|....... ..+| ..+.+ ++++|+++.+.++..++++|++++++. +|+ ++++||+|.++.+...++|+
T Consensus 193 f~~p~~~s~~~---~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~-~d~d~~v~Hqp~~r~~~k~~~rL~ 268 (460)
T 2wya_A 193 FYKPNLASEYP---IVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTL-DDLQYMIFHTPFCKMVQKSLARLM 268 (460)
T ss_dssp EECCCTTCSCC---EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCG-GGCSEEEECCSSHHHHHHHHHHHH
T ss_pred hhccCCCCCCc---ccCCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHhhhhhcccchHHHHHHHHHhc
Confidence 11121111000 0011 01112 567888889999999999999999997 999 99999999998877666553
Q ss_pred C-------------------------------------------------CcccchHHHHHHHhcCCCCcchHHHHHHHH
Q 016094 321 L-------------------------------------------------GKEKLGASRYALSEYGNLGAPSVLFILDDV 351 (395)
Q Consensus 321 i-------------------------------------------------~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~ 351 (395)
+ +.++... +++++|||++||+|+.|.++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~~---~~~~~GNt~sASiplaL~~l 345 (460)
T 2wya_A 269 FNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLY---LSTHNGNMYTSSLYGCLASL 345 (460)
T ss_dssp HHHHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHHHHHHHHHHHHHHHHHTGGGGH---HHHHHCCCGGGHHHHHHHHH
T ss_pred chhhhhcccchhhhhhhhhhhhcCCchhhhhhhhHHHHHHHHHHHHHhhcchhhhhh---HHHhhCCcchhhHHHHHHHH
Confidence 2 2334443 58899999999999999999
Q ss_pred HhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 352 RKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 352 ~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
+++.. +++.+| |+|+|++||+|+.+..+.+++.+.
T Consensus 346 l~~~~--~~~~~G---drIll~~fGSGl~s~~fs~~v~~~ 380 (460)
T 2wya_A 346 LSHHS--AQELAG---SRIGAFSYGSGLAASFFSFRVSQD 380 (460)
T ss_dssp HHHSC--HHHHTT---CEEEEEEEETTTEEEEEEEEECSC
T ss_pred HHhcc--ccCCCC---CEEEEEEecCCccceEEEEEEeCC
Confidence 97522 667899 999999999999999999998754
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=219.63 Aligned_cols=245 Identities=12% Similarity=0.132 Sum_probs=170.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
...+|+.+|+++||+++|++++|||+||+++.+++. ..+..++++||++ +++++++|+|++.||.+|..+|++
T Consensus 54 a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~--~~A~~va~~Lgip-----afdV~~ACsg~~~AL~~Aa~~I~s 126 (347)
T 3lma_A 54 AERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQN--VTANYVARHLKIP-----FLCLFGACSTSMESIAISSALIDG 126 (347)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSS--TTHHHHHHHHCCC-----EEEBCCSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCch--hHHHHHHHHhCCC-----EEEecChhHHHHHHHHHHHHHHhc
Confidence 388999999999999999999999999999998843 3788999999653 689999999999999999999999
Q ss_pred CCCCeEEEEEecccccc---cCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCceee
Q 016094 182 NPGARVLVVCCDITVLH---FHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVG 258 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~---~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 258 (395)
|.+++|||+++|+++.. |+.|.+..........+++|||+|+||++.+.. +.+.-...|.. ..+
T Consensus 127 G~~~~VLVVGaE~~S~aerq~r~p~e~g~q~p~ta~~t~dGAGA~VL~~~g~~-----p~I~~~t~Gkv--------vd~ 193 (347)
T 3lma_A 127 GFAKRALAATSSHNATAERQFRYPTEYGGQKPGTATSTVTGSGAVVLSQQPGG-----IKITSATVGRV--------IDL 193 (347)
T ss_dssp TSCSEEEEEEEECGGGTTCCC----------------CCCEEEEEEEESSCCS-----EEEEEEECCCC--------BCC
T ss_pred CCCCEEEEEEeccccchhhhccCcchhcccCCchhcEEccceeEEEEEecCCC-----Cceeeeeeeee--------ecc
Confidence 99999999999999852 222221111123356788999999999976432 12221111110 001
Q ss_pred eEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEE---EcCCChHHHHHHHHHcCCCcccchHHHHHHH
Q 016094 259 HLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYI---VHPGGKVILDQVEQNLGLGKEKLGASRYALS 334 (395)
Q Consensus 259 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i---~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~ 334 (395)
...+. +.|+ ..+.....+.|+++|++.|+++ +|+ +++ +||.|.+|++.+.+++|++.++.+.+. -+.
T Consensus 194 g~~d~---~nmg----~amaPaA~~ti~~~l~d~g~~~-~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dc-g~~ 264 (347)
T 3lma_A 194 GITDS---QDMG----SAMAPAAADTIKQHLEDLGRTP-DDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDC-GLM 264 (347)
T ss_dssp SCCCT---TCHH----HHHHHHHHHHHHHHHHHHTCCG-GGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEG-GGT
T ss_pred CCCCC---CCcc----ccchHHHHHHHHHHHHHhCCCH-HHcCEEecCChHHHHHHHHHHHHHHcCCChhHCcccc-ceE
Confidence 11000 1111 1233344567899999999997 999 999 779999999999999999998876521 133
Q ss_pred hcC--------CCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEccccee
Q 016094 335 EYG--------NLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITV 381 (395)
Q Consensus 335 ~~G--------n~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~ 381 (395)
-|+ =.|++....+|.-.+-.+ ++.|. ..+||++++|+.++-
T Consensus 265 iy~~~~~~~~ggsg~~csa~v~~~~~~~~-----~~~g~-~~ril~~~tGalls~ 313 (347)
T 3lma_A 265 IYTPDQQVFAGGSGCACSAVVTFAHIFKE-----IEAGR-LNRVLVVATGALLSP 313 (347)
T ss_dssp SSCC---------CCCCHHHHHHHTHHHH-----HHTTS-CSEEEEEEEEECCCH
T ss_pred EecCCCcccCCCCccccHHHHHHHHHHHH-----HhcCc-ccEEEEEecccccCc
Confidence 444 445578888887776653 33341 279999999998763
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.1e-22 Score=194.01 Aligned_cols=252 Identities=19% Similarity=0.140 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.|++++.++ ...|..+.+++..||++...+ +++++.+|+|++.+|..|.++|++
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p-~~~v~~~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVP-SYTVNKLCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSC-EEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCce-EEEccccchHHHHHHHHHHHHHhC
Confidence 889999999999999999999999999999887 667899999999999974443 889999999999999999999999
Q ss_pred CCCCeEEEEEecccccc-cC------------------------------------------------------------
Q 016094 182 NPGARVLVVCCDITVLH-FH------------------------------------------------------------ 200 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~-~~------------------------------------------------------------ 200 (395)
|.+++|||+++|.++.. +.
T Consensus 108 G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~ 187 (395)
T 4e1l_A 108 GENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQN 187 (395)
T ss_dssp TSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999987640 00
Q ss_pred ------------------------------CCCch-----hhh---------------hhhhhhhhccccEEEEEecCCC
Q 016094 201 ------------------------------EPTEA-----RLD---------------MLVGQAIFGDGAAAAIIGADPD 230 (395)
Q Consensus 201 ------------------------------~~~~~-----~~~---------------~~~~~~l~GDGAaA~vL~~~~~ 230 (395)
++++. +.+ .......+||||+|+||.+.+.
T Consensus 188 ~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~ 267 (395)
T 4e1l_A 188 KAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQK 267 (395)
T ss_dssp HHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTSBCCCEEEEEEEEEEEHHH
T ss_pred HHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCeeCCcCCCccceEEEEEEecHHH
Confidence 00000 000 0002344689999999997653
Q ss_pred CC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCC
Q 016094 231 VS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGG 308 (395)
Q Consensus 231 ~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~ 308 (395)
.. .+..+...+.+.+.... .+. ........+++++|+++|+++ +|| ++.+|+.+
T Consensus 268 A~~~g~~~~a~i~g~~~~~~--------------------~p~---~~~~~~~~ai~~al~~agl~~-~dId~ve~~d~f 323 (395)
T 4e1l_A 268 ADELGIRPLAKIKSYASAGV--------------------EPE---VMGTGPIPATRKALKKAGLSI-NDIDLIEANEAF 323 (395)
T ss_dssp HHHHTCCCSEEEEEEEEEEC--------------------CGG---GTTCTHHHHHHHHHHHTTCCG-GGCSEEEECCSB
T ss_pred HHHCCCCeEEEEEEEEEccC--------------------CCC---cchHHHHHHHHHHHHHcCCCH-HHcCEEEecChh
Confidence 10 11112334544322110 000 001123467889999999997 999 99999999
Q ss_pred hHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEE
Q 016094 309 KVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 309 ~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr 387 (395)
......+.+.||++++++..+ .....+||+.+|+-...+.+++.+.. + +.+ .+.+....+.|....+++|+
T Consensus 324 a~~~~~~~~~lg~~~~~v~~~-gg~~~~Gh~~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 324 AAQALAVKNELQIDSSKLNVN-GGAIALGHPIGASGARILVTLIYEMQ--K--RKV---ETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp HHHHHHHHHHHTCCGGGBSTT-CCHHHHCCCTTTHHHHHHHHHHHHHH--H--HTC---SEEEEEEESSTTEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCCcC-CchhhcCCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEEccCCCceEEEEEe
Confidence 999999999999999887653 23567999998887776666665421 1 122 45454444444445556665
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.6e-22 Score=193.73 Aligned_cols=253 Identities=15% Similarity=0.104 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.+++++.++ ...|..+.+++..||++...+ +++++.+|+|++.+|..|.++|++
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p-~~~v~~aCss~~~al~~A~~~I~~ 107 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVT-GYTIQRQCSSGMQAIMSAAMQIQL 107 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCE-EEEEECGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCce-EEEecCcchHHHHHHHHHHHHHhC
Confidence 889999999999999999999999999999887 567889999999999974333 899999999999999999999999
Q ss_pred CCCCeEEEEEecccccc-cC------------------------------------------------------------
Q 016094 182 NPGARVLVVCCDITVLH-FH------------------------------------------------------------ 200 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~-~~------------------------------------------------------------ 200 (395)
|.+++|||+++|.++.. +.
T Consensus 108 G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~ 187 (394)
T 3ss6_A 108 GVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHTL 187 (394)
T ss_dssp TSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 99999999999987741 10
Q ss_pred ----------------------------CCCch-----hhh---------------hhhhhhhhccccEEEEEecCCCCC
Q 016094 201 ----------------------------EPTEA-----RLD---------------MLVGQAIFGDGAAAAIIGADPDVS 232 (395)
Q Consensus 201 ----------------------------~~~~~-----~~~---------------~~~~~~l~GDGAaA~vL~~~~~~~ 232 (395)
+|++. +.+ .......+||||+|+||.+.+...
T Consensus 188 A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~ 267 (394)
T 3ss6_A 188 ALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAK 267 (394)
T ss_dssp HHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHH
T ss_pred HHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecCccCCcccceeEEEeccHHHHH
Confidence 00000 000 001234568999999998764310
Q ss_pred -CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChH
Q 016094 233 -LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKV 310 (395)
Q Consensus 233 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~ 310 (395)
.+..+...+.+.+.... .+. ........+++++|+++|+++ +|| ++-+|+.+..
T Consensus 268 ~~g~~~~a~I~g~~~~~~--------------------~p~---~~~~~~~~a~~~al~~agl~~-~dId~ve~~d~fa~ 323 (394)
T 3ss6_A 268 EKGLQPLARIVGYSVAGV--------------------DPK---IMGIGPAPAIRKGLEKVDWSL-EDADLLEINEAFAA 323 (394)
T ss_dssp HHTCCCSEEEEEEEEEEC--------------------CGG---GGGGTHHHHHHHHHHHHTCCG-GGCSEEEECCSBHH
T ss_pred HCCCCceEEEEEEEEecC--------------------CCc---cchHHHHHHHHHHHHHcCCCH-HHcCEEEeCCchHH
Confidence 01112334544322110 011 011134577899999999997 999 9999999988
Q ss_pred HHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 311 ILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 311 ~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
....+.+.||++++++..+ .....+||+.+|+-...+.+++.+.. + +.+ .+.|....+.|....+++|+.
T Consensus 324 ~~~~~~~~lg~~~~~v~~~-gg~~~~GH~~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 324 QYLAVEKELDLDREKVNVN-GSGVGLGHPIGCTGARITVSLIHELK--R--RGL---EKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp HHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---CEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCCCCCC-cchHhhCCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEEccCcCceeEEEEEc
Confidence 9999999999998887653 23567899999997666666655411 1 123 454444334444445667664
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=193.97 Aligned_cols=269 Identities=14% Similarity=0.106 Sum_probs=183.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C---------------------------CCCCH-H
Q 016094 96 HAMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V---------------------------DMPGA-D 142 (395)
Q Consensus 96 ~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~---------------------------~~p~~-a 142 (395)
.........+|+.+|+++||+++|+++++|| .|++++.++ + ..|+. +
T Consensus 66 ~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 145 (424)
T 1tqy_A 66 ELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVP 145 (424)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHST
T ss_pred HHHhcCHHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhccccccccc
Confidence 3344456788999999999999999999999 688887654 2 11222 3
Q ss_pred H----HHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------CCC-----C
Q 016094 143 V----RLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHF----------HEP-----T 203 (395)
Q Consensus 143 ~----~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~----------~~~-----~ 203 (395)
. +|+..||++. + ++.++.+|+|++.||..|.++|++|.++.|||+++|.+...+ ..+ .
T Consensus 146 ~~~~~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~ 222 (424)
T 1tqy_A 146 SVMPAEVAWAVGAEG-P--VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPE 222 (424)
T ss_dssp THHHHHHHHHHTCCS-C--EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGG
T ss_pred chhHhHHHHhcCCCC-c--eEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCC
Confidence 4 9999999986 4 789999999999999999999999999999999999852110 111 1
Q ss_pred ch--hhhhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHh
Q 016094 204 EA--RLDMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKY 280 (395)
Q Consensus 204 ~~--~~~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~ 280 (395)
.. .+.....++++||||+|+||++.+... .|.....++.+.+... ++.++.. +. + ....
T Consensus 223 ~~~rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------dg~~~~~-p~-~--~g~~ 284 (424)
T 1tqy_A 223 HASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRC--------------NAYHMTG-LK-A--DGRE 284 (424)
T ss_dssp GCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CSSCSSC-CC-T--TCHH
T ss_pred CCccCCCCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcC--------------CCCCCCC-CC-C--CHHH
Confidence 00 011223578999999999999764210 0011234454433211 1111000 00 0 0124
Q ss_pred HHHHHHHhhcccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 281 IDKLLADAMSPIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 281 ~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
..++++++|+++|+++ +|| ++.+|+.+..+-+ .+.+.++...++++.+ .+...+||+.+|+-++.|..++..
T Consensus 285 ~~~ai~~al~~agl~~-~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~-s~k~~~GH~~~AaG~~~l~~~~l~ 362 (424)
T 1tqy_A 285 MAETIRVALDESRTDA-TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS-SIKSMVGHSLGAIGSLEIAACVLA 362 (424)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEE-CTHHHHCBCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCH-HHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeee-ccccccccChhhhHHHHHHHHHHH
Confidence 5678999999999997 999 9999999987543 4556666544454432 135678999999988887764443
Q ss_pred hhhhhccc------------------------CCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 355 STEERKAT------------------------TGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 355 ~~~~g~l~------------------------~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
. +++.+. +. ++++..+||.|.+.++++|+..++
T Consensus 363 l-~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~---~~a~~~sfG~GG~n~~~vl~~~~~ 419 (424)
T 1tqy_A 363 L-EHGVVPPTANLRTSDPECDLDYVPLEARERKL---RSVLTVGSGFGGFQSAMVLRDAET 419 (424)
T ss_dssp H-HHCEECCBTTCCSBBTTBCSCCCBSSCEECCC---SEEEEEEEETTTEEEEEEEECHHH
T ss_pred H-HcCCcCCCCCCCCCCCCCCcccCCCcccCCCC---CEEEEccccCCceEEEEEEccCCc
Confidence 1 113332 23 789999999999999999987543
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=191.15 Aligned_cols=252 Identities=17% Similarity=0.117 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.|+++++++ +..|..+.+++..||++...+ +++++.+|+|++.+|..|.++|++
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p-~~~v~~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP-AMTINIVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC-EEEECCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce-EEEeccccHHHHHHHHHHHHHHhc
Confidence 889999999999999999999999999999988 678899999999999974333 889999999999999999999999
Q ss_pred CCCCeEEEEEecccccc-cCC-----------------------------------------------------------
Q 016094 182 NPGARVLVVCCDITVLH-FHE----------------------------------------------------------- 201 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~-~~~----------------------------------------------------------- 201 (395)
|.+++|||+++|.++.. +..
T Consensus 110 G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~ 189 (396)
T 4dd5_A 110 GDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQN 189 (396)
T ss_dssp TSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999988741 100
Q ss_pred ------------------------------CCch-----hhh---------------hhhhhhhhccccEEEEEecCCCC
Q 016094 202 ------------------------------PTEA-----RLD---------------MLVGQAIFGDGAAAAIIGADPDV 231 (395)
Q Consensus 202 ------------------------------~~~~-----~~~---------------~~~~~~l~GDGAaA~vL~~~~~~ 231 (395)
+++. +.+ .......+||||+|+||.+.+..
T Consensus 190 ~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A 269 (396)
T 4dd5_A 190 KAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKA 269 (396)
T ss_dssp HHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHH
T ss_pred HHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeecCCCCCcCcceeEEEEeeHHHH
Confidence 0000 000 00113346899999999986532
Q ss_pred C-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCCh
Q 016094 232 S-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGK 309 (395)
Q Consensus 232 ~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~ 309 (395)
. .+..+...+.+.+.... . +.........+++++|+++|+++ +|| ++-+|-...
T Consensus 270 ~~~g~~~~a~I~g~~~~~~--------------------~---p~~~~~~~~~a~~~al~~Agl~~-~dId~ve~~d~f~ 325 (396)
T 4dd5_A 270 EELGIEPLATIVSYGTAGV--------------------D---PKIMGYGPVPATKKALEAANMTI-EDIDLVEANEAFA 325 (396)
T ss_dssp HHHTCCCSEEEEEEEEEEC--------------------C---GGGGGGTHHHHHHHHHHHHTCCG-GGCSEEEECCSBH
T ss_pred HHCCCCceEEEEEEEEecC--------------------C---CCcccHHHHHHHHHHHHHcCCCH-HHcCEEEecChHH
Confidence 0 11123345554332110 0 11111234578899999999997 999 999999877
Q ss_pred HHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEE
Q 016094 310 VILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387 (395)
Q Consensus 310 ~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr 387 (395)
.....+.+.||++++++..+ .....+||+.+|+-...|.+++.... + +.+ .+.|....+.|....+++|+
T Consensus 326 ~~~~~~~~~lg~~~~~~n~~-gg~~~~GH~~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~g~a~~~e 395 (396)
T 4dd5_A 326 AQSVAVIRDLNIDMNKVNVN-GGAIAIGHPIGCSGARILTTLLYEMK--R--RDA---KTGLATLCIGGGMGTTLIVK 395 (396)
T ss_dssp HHHHHHHHHHTCCTTSBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---SEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCccCCC-CchhhccCcHHHHHHHHHHHHHHHHH--h--cCC---CeEEEEEcccCCceeEEEEe
Confidence 77778899999988776543 24567999988887777766665421 1 122 45555545555555567765
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.8e-21 Score=189.23 Aligned_cols=263 Identities=16% Similarity=0.138 Sum_probs=180.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCCC---------------------------CCCCHHHHHHHHcC
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYGV---------------------------DMPGADVRLMNLLG 150 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~~---------------------------~~p~~a~~l~~~LG 150 (395)
...+|+.+|+++||+++|+++++|| .|+++++++. ..+..+.+|+..||
T Consensus 97 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg 176 (437)
T 2gqd_A 97 RFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLG 176 (437)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhC
Confidence 4778999999999999999999999 9999887541 11257889999999
Q ss_pred CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------CC----CCch--hhhhhhhhh
Q 016094 151 LEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHF----------HE----PTEA--RLDMLVGQA 214 (395)
Q Consensus 151 l~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~----------~~----~~~~--~~~~~~~~~ 214 (395)
++. + ++.++.+|+|++.||..|.++|++|.++.|||+++|.....+ .. |... .+.....++
T Consensus 177 l~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~~~G~ 253 (437)
T 2gqd_A 177 AKG-P--NGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGF 253 (437)
T ss_dssp CCS-S--EECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTTCCSB
T ss_pred CCC-c--eEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCCCCCc
Confidence 987 4 788999999999999999999999999999999999742111 00 1100 011223578
Q ss_pred hhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccC
Q 016094 215 IFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIG 293 (395)
Q Consensus 215 l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g 293 (395)
++||||+|+||++.+... .|.....++.+.+... ++.+++ .+. + ......++++++|+++|
T Consensus 254 v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------dg~~~~-~p~-~--~~~~~~~ai~~Al~~Ag 315 (437)
T 2gqd_A 254 VMGEGAGILVIESLESAQARGANIYAEIVGYGTTG--------------DAYHIT-APA-P--EGEGGSRAMQAAMDDAG 315 (437)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEE--------------CCSCSS-SCC-G--GGHHHHHHHHHHHHHHT
T ss_pred eeeceEEEEEECcHHHHHhCCCceEEEEEEEEecC--------------CCCCCC-CCC-C--CHHHHHHHHHHHHHHcC
Confidence 999999999998754210 0011234455433211 111100 011 0 12345678999999999
Q ss_pred CCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCC---
Q 016094 294 ISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTG--- 364 (395)
Q Consensus 294 ~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G--- 364 (395)
+++ +|| ++.+|+.+..+.+ .+.+.++.+.++++.+ .+...+||+.+|+-.+.|..++... +++.+.|-
T Consensus 316 l~p-~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~-s~k~~~GH~~gAaG~~~li~~~l~l-~~~~ipp~~~~ 392 (437)
T 2gqd_A 316 IEP-KDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVS-STKSMTGHLLGATGGIEAIFSALSI-KDSKVAPTIHA 392 (437)
T ss_dssp CCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HHTEECCBTTC
T ss_pred CCH-hhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceee-cchhhhcCChhhhhHHHHHHHHHHH-hcCCCCCCCCC
Confidence 997 999 9999999988644 4566677654555432 1356699999998877776655431 11332110
Q ss_pred ------------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 365 ------------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 365 ------------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.+..+++.-+||.|.+-++++|+.
T Consensus 393 ~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 434 (437)
T 2gqd_A 393 VTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKK 434 (437)
T ss_dssp CSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEEC
T ss_pred CCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEe
Confidence 001578889999999999999875
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=187.23 Aligned_cols=269 Identities=14% Similarity=0.142 Sum_probs=179.7
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecC-----------------C-CCCC---------CHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVY-----------------G-VDMP---------GADVRL 145 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~-----------------~-~~~p---------~~a~~l 145 (395)
.........|+.+|+++||+++|+++++|| +|++++.+ + ...| ..+.+|
T Consensus 68 ~~~~d~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 147 (413)
T 3o04_A 68 ARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQV 147 (413)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHH
Confidence 334445778999999999999999999999 99998864 1 1222 247899
Q ss_pred HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc--------------cCCCCch--hhhh
Q 016094 146 MNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH--------------FHEPTEA--RLDM 209 (395)
Q Consensus 146 ~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~--------------~~~~~~~--~~~~ 209 (395)
+..||++. + .++++.+|+|++.||..|.++|++|.++.|||+++|.+... ..+|... .+..
T Consensus 148 a~~lgl~g-p--~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~ 224 (413)
T 3o04_A 148 SIRFGAKG-I--NSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRPFDK 224 (413)
T ss_dssp HHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCTTBT
T ss_pred HHHhCCCC-c--ceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCCCcC
Confidence 99999986 4 78899999999999999999999999999999999983210 1011110 0122
Q ss_pred hhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHh
Q 016094 210 LVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADA 288 (395)
Q Consensus 210 ~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 288 (395)
...++++||||+|+||++.+... .+......+.+.+... ++.+... +. + ......++++++
T Consensus 225 ~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~--------------dg~~~~~-~~-~--~~~~~~~a~~~a 286 (413)
T 3o04_A 225 DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATG--------------DAYHITA-PA-P--NGEGAARAMKMA 286 (413)
T ss_dssp TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEE--------------CCSCSSS-CC-G--GGHHHHHHHHHH
T ss_pred CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcC--------------CCCCCCC-CC-C--CHHHHHHHHHHH
Confidence 23578999999999999754210 0111234454432211 1111000 00 1 123456789999
Q ss_pred hcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhccc
Q 016094 289 MSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362 (395)
Q Consensus 289 L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~ 362 (395)
|+++|+++ +|| ++.+|..+...-+. +.+.++...+++..+ ..-..+||+.+|+-.+.|..++... +++.+.
T Consensus 287 l~~agl~~-~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~~~~~~~~l-~~~~ip 363 (413)
T 3o04_A 287 IDDAGLTP-DKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAIS-STKSMTGHTLGASGGIEAIFALLTI-RDNIIA 363 (413)
T ss_dssp HHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HHTEEC
T ss_pred HHHcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCcee-cccccccccHHHHHHHHHHHHHHHH-HhCCcC
Confidence 99999997 999 99999998876553 345555444444332 2456789999998766665554421 113221
Q ss_pred C-----------------C----CCCceEEEEEEcccceeeeeeEEec
Q 016094 363 T-----------------G----EGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 363 ~-----------------G----~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
| . .+..+++.-+||.|.+.++++|+.-
T Consensus 364 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 364 PTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp CBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence 1 0 0125788889999999999999864
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.9e-21 Score=190.61 Aligned_cols=271 Identities=15% Similarity=0.158 Sum_probs=184.7
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC---------------------------CCCCCHH
Q 016094 94 ARHAMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG---------------------------VDMPGAD 142 (395)
Q Consensus 94 ~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~---------------------------~~~p~~a 142 (395)
.+..........|+.+|+++||+++|+++++|| .+++++.++ ...+..+
T Consensus 79 ~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (427)
T 3ho9_A 79 RKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVA 158 (427)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHH
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHH
Confidence 344444455788999999999999999999999 688887631 1234568
Q ss_pred HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------CC-----CCch--
Q 016094 143 VRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHF----------HE-----PTEA-- 205 (395)
Q Consensus 143 ~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~----------~~-----~~~~-- 205 (395)
.+|+..||++.. .+.+..+|+|++.||..|.++|++|.++.|||+++|.++..+ .. |...
T Consensus 159 ~~is~~lgl~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~ 235 (427)
T 3ho9_A 159 GHLTIMYGLRGP---SISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASR 235 (427)
T ss_dssp HHHHHHHTCCSC---EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCC
T ss_pred HHHHHHhCCCCC---eecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccC
Confidence 899999999863 789999999999999999999999999999999999875210 00 0000
Q ss_pred hhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHH
Q 016094 206 RLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKL 284 (395)
Q Consensus 206 ~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 284 (395)
.+.....++++||||+|+||++.+.. ..|......+.+.+... ++.++.. +. .......++
T Consensus 236 pfd~~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~--------------dg~~~~~-p~---~~~~~~~~a 297 (427)
T 3ho9_A 236 PWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSS--------------DAYHMTS-PP---ENGAGAALA 297 (427)
T ss_dssp TTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSBTTB-CC---TTCHHHHHH
T ss_pred CccCCCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecC--------------CCCCcCC-CC---CCHHHHHHH
Confidence 01122357899999999999975421 01112234555433211 1110000 00 012234578
Q ss_pred HHHhhcccCCCCCCce-EEEEcCC-----ChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhh
Q 016094 285 LADAMSPIGISDWNSL-FYIVHPG-----GKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEE 358 (395)
Q Consensus 285 i~~~L~~~g~~~~~di-~~i~H~~-----~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~ 358 (395)
++++|+++|+++ +|| ++.+|.. +......+.+.++.+.+++..+ .....+||+.+|+-.+.|..++... ++
T Consensus 298 i~~al~~Agl~~-~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~~~l-~~ 374 (427)
T 3ho9_A 298 MANALRDAGIEA-SQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTGHLLGAAGAVESIYSILAL-RD 374 (427)
T ss_dssp HHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHcCCCH-HHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEe-cchHhhccCHHHHHHHHHHHHHHHH-hc
Confidence 899999999997 999 9999944 4456667788888876665542 2466799999998666666554431 11
Q ss_pred hcccC----------------------CCCCceEEEEEEcccceeeeeeEEe
Q 016094 359 RKATT----------------------GEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 359 g~l~~----------------------G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+.+.| -.+..+++.-+||.|.+.++++|+.
T Consensus 375 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 375 QAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp TEECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 32211 0012688999999999999999874
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=7.5e-21 Score=188.28 Aligned_cols=268 Identities=13% Similarity=0.121 Sum_probs=183.7
Q ss_pred HHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-----------------C--------CC-CHHHHH
Q 016094 97 AMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V-----------------D--------MP-GADVRL 145 (395)
Q Consensus 97 ~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~-----------------~--------~p-~~a~~l 145 (395)
........+|+.+|+++||+++|+++++|| .+++++.++ + . .| ..+.+|
T Consensus 65 ~~~~d~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 144 (408)
T 1j3n_A 65 LRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHI 144 (408)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHH
Confidence 334445789999999999999999999998 477776543 1 0 23 467899
Q ss_pred HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCCCCch-------hhh
Q 016094 146 MNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHEPTEA-------RLD 208 (395)
Q Consensus 146 ~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~~~~~-------~~~ 208 (395)
+..||++. + .+.++.+|+|++.||..|.++|++|.++.|||+++|..... +..+... .+.
T Consensus 145 a~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd 221 (408)
T 1j3n_A 145 AMRYGFTG-P--SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFT 221 (408)
T ss_dssp HHHHTCCS-C--BCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTB
T ss_pred HHHhCCCC-c--eeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCc
Confidence 99999986 4 78999999999999999999999999999999999974311 1111000 011
Q ss_pred hhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHH
Q 016094 209 MLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLAD 287 (395)
Q Consensus 209 ~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 287 (395)
....++++||||+|+||++.+... .|.....++.+.+... ++.++. .+. .......+++++
T Consensus 222 ~~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~--------------d~~~~~-~p~---~~~~~~~~ai~~ 283 (408)
T 1j3n_A 222 LSRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSA--------------DAHHIT-EPH---PEGKGAALAMAR 283 (408)
T ss_dssp TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCSS-CCC---TTCHHHHHHHHH
T ss_pred CCCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcC--------------CCCCCC-CCC---CCHHHHHHHHHH
Confidence 122578999999999998754210 0111234454433211 111100 010 012345678999
Q ss_pred hhcccCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcc
Q 016094 288 AMSPIGISDWNSL-FYIVHPGGKVI-----LDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKA 361 (395)
Q Consensus 288 ~L~~~g~~~~~di-~~i~H~~~~~~-----~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l 361 (395)
+|+++|+++ +|| ++.+|+.+..+ +..+.+.||.+.+++..+ .....+||+.+|+-++.|..++... +++.+
T Consensus 284 al~~Agl~~-~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~~AsG~~~li~~~l~l-~~~~i 360 (408)
T 1j3n_A 284 ALKDAGIAP-EQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVS-STKSMIGHLLGAAGAVEAIATVQAL-YHGVI 360 (408)
T ss_dssp HHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HHTEE
T ss_pred HHHHcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEE-CchhhhccCHHHHHHHHHHHHHHHH-hcCCC
Confidence 999999997 999 99999999876 666788888766666542 1357899999999888777655431 11322
Q ss_pred cCCC--------------------CCceEEEEEEcccceeeeeeEEe
Q 016094 362 TTGE--------------------GLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 362 ~~G~--------------------~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.|-- +..+++.-+||-|.+-++++|+.
T Consensus 361 pp~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 361 PPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp CCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred CCCCCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 1100 01578899999999999999874
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=6e-20 Score=182.19 Aligned_cols=272 Identities=16% Similarity=0.114 Sum_probs=182.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCCC------------------C---------CCCH
Q 016094 93 DARHAMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYGV------------------D---------MPGA 141 (395)
Q Consensus 93 ~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~~------------------~---------~p~~ 141 (395)
..+...+.....+|+.+|+++||+++|+++++|| .|+++++++. . ....
T Consensus 67 ~~~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 146 (416)
T 1e5m_A 67 DRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMA 146 (416)
T ss_dssp CHHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHH
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHH
Confidence 3444455566789999999999999999999999 7888876531 1 1246
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccc-ccc---------cCC-----CCch-
Q 016094 142 DVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDIT-VLH---------FHE-----PTEA- 205 (395)
Q Consensus 142 a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~-s~~---------~~~-----~~~~- 205 (395)
+.+|+..||++. + ++.++.+|+|++.||..|.++|++|.++.||++++|.. +.. ... |...
T Consensus 147 a~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~ 223 (416)
T 1e5m_A 147 SGLTAINLGAKG-P--NNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHAS 223 (416)
T ss_dssp HHHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTC
T ss_pred HHHHHHHhCCCC-c--eeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCcccc
Confidence 899999999986 3 68999999999999999999999999999999999973 321 000 1100
Q ss_pred -hhhhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHH
Q 016094 206 -RLDMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDK 283 (395)
Q Consensus 206 -~~~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 283 (395)
.+.....++++||||+|+||++.+... .|.....++.+.+... ++.+++. +. + ......+
T Consensus 224 rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------d~~~~~~-p~-~--~~~~~~~ 285 (416)
T 1e5m_A 224 RPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTC--------------DAYHITA-PV-P--DGRGATR 285 (416)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCSSS-CC-T--TCHHHHH
T ss_pred ccCccCCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEcc--------------CCCCCCC-CC-C--CHHHHHH
Confidence 011223578999999999998754210 0011234555433211 1111000 10 0 1124567
Q ss_pred HHHHhhcccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhh
Q 016094 284 LLADAMSPIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTE 357 (395)
Q Consensus 284 ~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~ 357 (395)
+++++|+++|+++ +|| ++.+|+.+..+.+ .+.+.+|...++++.+ .+...+||+.+|+-.+.|..++... .
T Consensus 286 ai~~al~~agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~l-~ 362 (416)
T 1e5m_A 286 AIAWALKDSGLKP-EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVS-STKSMTGHLLGGSGGIEAVATVMAI-A 362 (416)
T ss_dssp HHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHcCCCH-hHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeee-CcchhhcccHHHHHHHHHHHHHHHH-h
Confidence 8999999999997 999 9999999987654 4556676654554432 1356789999998777666554421 1
Q ss_pred hhcccCC---------------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 358 ERKATTG---------------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 358 ~g~l~~G---------------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
++.+.|- .+..+++.-+||.|.+-.+++|+.
T Consensus 363 ~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~ 414 (416)
T 1e5m_A 363 EDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK 414 (416)
T ss_dssp HTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred cCCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEEe
Confidence 1332110 001578888999999988888874
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-20 Score=182.60 Aligned_cols=261 Identities=16% Similarity=0.123 Sum_probs=175.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCCC----------------------C----CC-CHHHHHHHHcC
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYGV----------------------D----MP-GADVRLMNLLG 150 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~~----------------------~----~p-~~a~~l~~~LG 150 (395)
...+|+.+|+++||+++|+++++|| .|++++.++. . .+ ..+.+|+..||
T Consensus 92 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 171 (430)
T 1ox0_A 92 NYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFG 171 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhc
Confidence 3678999999999999999999999 6888876531 0 12 46789999999
Q ss_pred CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCC----CCch--hhhhhhhhh
Q 016094 151 LEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHE----PTEA--RLDMLVGQA 214 (395)
Q Consensus 151 l~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~----~~~~--~~~~~~~~~ 214 (395)
++. + ++.++.+|+|++.||..|.++|++|.++.|||+++|..... ... |... .+.....++
T Consensus 172 l~G-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g~ 248 (430)
T 1ox0_A 172 ANG-V--CKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGF 248 (430)
T ss_dssp CCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCSB
T ss_pred CCC-c--eEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCCc
Confidence 986 4 78999999999999999999999999999999999985321 011 1100 011223578
Q ss_pred hhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccC
Q 016094 215 IFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIG 293 (395)
Q Consensus 215 l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g 293 (395)
++||||+|+||++.+... .|.....++.+.+... ++..++ .+. .......++++++|+++|
T Consensus 249 ~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------dg~~~~-~p~---~~~~~~~~ai~~al~~Ag 310 (430)
T 1ox0_A 249 VMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTC--------------DAYHMT-SPH---PEGQGAIKAIKLALEEAE 310 (430)
T ss_dssp CBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCSS-SCC---TTCHHHHHHHHHHHHHHT
T ss_pred cccceEEEEEECcHHHHHhCCCceEEEEEEEEEec--------------CCCCCC-CCC---CChHHHHHHHHHHHHHhC
Confidence 999999999999754210 0111234554432211 111000 010 012345678999999999
Q ss_pred CCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC----
Q 016094 294 ISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT---- 363 (395)
Q Consensus 294 ~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~---- 363 (395)
+++ +|| ++.+|+.+..+.+ .+.+.+|- +++.+ .+-..+||+.+|+-.+.+..++... +++.+.|
T Consensus 311 l~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~---~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~l-~~~~ipp~~~~ 384 (430)
T 1ox0_A 311 ISP-EQVAYVNAHGTSTPANEKGESGAIVAVLGK---EVPVS-STKSFTGHLLGAAGAVEAIVTIEAM-RHNFVPMTAGT 384 (430)
T ss_dssp CCG-GGCCCEECCCCSCHHHHHHHHHHHHHHHCS---SSEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HHTEECCBSSC
T ss_pred cCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhCC---Cceec-ccccccccchhhHHHHHHHHHHHHH-hcCccCCCCCC
Confidence 997 999 9999999988765 34455653 22211 0245689999998777766555421 1132211
Q ss_pred -------------C----CCCceEEEEEEcccceeeeeeEEec
Q 016094 364 -------------G----EGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 364 -------------G----~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
. .+..+++.-+||.|.+-++++|+..
T Consensus 385 ~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 385 SEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp CSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEeec
Confidence 0 0125788899999999999998753
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.4e-20 Score=183.57 Aligned_cols=270 Identities=16% Similarity=0.095 Sum_probs=180.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCC-CCcC----EEEEEecCC-C-------------------------CCC-CHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPV-SKIT----HLIFGAVYG-V-------------------------DMP-GAD 142 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~-~~Id----~li~~s~~~-~-------------------------~~p-~~a 142 (395)
+.........+|+.+|+++||+++|+++ ++|| .|+++++++ + ..+ ..+
T Consensus 89 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 168 (438)
T 2iwz_A 89 SDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAA 168 (438)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHH
Confidence 3334445678999999999999999998 8888 688877643 1 123 478
Q ss_pred HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccccc-----------C---CCCch--h
Q 016094 143 VRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHF-----------H---EPTEA--R 206 (395)
Q Consensus 143 ~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~-----------~---~~~~~--~ 206 (395)
.+|+..||++. + ++.++.+|+|++.||..|.++|++|.++.|||+++|.....+ . +|... .
T Consensus 169 ~~ia~~lgl~g-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~p 245 (438)
T 2iwz_A 169 GQVSIRYKLKG-P--NHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACRP 245 (438)
T ss_dssp HHHHHHHTCCS-C--EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCCT
T ss_pred HHHHHHhCCCC-c--eeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCccccc
Confidence 99999999987 4 789999999999999999999999999999999999732111 0 01110 0
Q ss_pred hhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHH
Q 016094 207 LDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLL 285 (395)
Q Consensus 207 ~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 285 (395)
+.....++++||||+|+||++.+.. ..|.....++.+.+... ++.+++ .+. .......+++
T Consensus 246 fd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------d~~~~t-~p~---~~~~~~~~ai 307 (438)
T 2iwz_A 246 FHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSG--------------DAGHIT-APD---PEGEGALRCM 307 (438)
T ss_dssp TCTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCSS-SCC---TTCHHHHHHH
T ss_pred CCCCCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecC--------------CCCCCC-CCC---CCHHHHHHHH
Confidence 1122357899999999999875421 00011234455433211 111000 010 0123456789
Q ss_pred HHhhcccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhh
Q 016094 286 ADAMSPIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEER 359 (395)
Q Consensus 286 ~~~L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g 359 (395)
+++|+++|+++ +|| ++.+|+.+..+-+ .+.+.++...++++.+ .+...+||+.+|+-.+.|..++.... ++
T Consensus 308 ~~Al~~Agl~p-~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~-s~K~~~GH~~gAaG~~~li~~~l~l~-~~ 384 (438)
T 2iwz_A 308 AAALKDAGVQP-EEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVS-STKGATGHLLGAAGAVEAAFTTLACY-YQ 384 (438)
T ss_dssp HHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CCHHHHCBCGGGHHHHHHHHHHHHHH-HT
T ss_pred HHHHHHcCCCH-HHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCccee-cchhhhcCCHHHHHHHHHHHHHHHHh-cC
Confidence 99999999997 999 9999999987643 4556666554454432 13567899999988877765554211 13
Q ss_pred ccc------------------------CCCCCceEEEEEEcccceeeeeeEEe
Q 016094 360 KAT------------------------TGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 360 ~l~------------------------~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.+. +..+..+++.-+||.|.+-..++|+.
T Consensus 385 ~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 385 KLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp EECCBTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred ccCCCCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 321 10012567888999999988888874
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=185.47 Aligned_cols=253 Identities=13% Similarity=0.024 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCC-CccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLE-PSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~-~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|+++++||.|++++.++ +..|..+..++..||++ ..+ +++++.+|+|++.||..|.++|+
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p--~~~v~~aCss~~~Al~~A~~~I~ 132 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVP--LSTVNRQCSSGLQAVASIAGGIR 132 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC--EEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCce--EEEeCCCCHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999998877 44567778889999995 344 78999999999999999999999
Q ss_pred cCCCCeEEEEEecccccc-c------------------------------------------------------------
Q 016094 181 NNPGARVLVVCCDITVLH-F------------------------------------------------------------ 199 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~-~------------------------------------------------------------ 199 (395)
+|.++.||++++|.++.. +
T Consensus 133 ~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~ 212 (418)
T 2iik_A 133 NGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGC 212 (418)
T ss_dssp TTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCc
Confidence 999999999999987641 0
Q ss_pred -CCCC---------------------c-hh-h-------------hhh------hhhhhhccccEEEEEecCCCCC-CCC
Q 016094 200 -HEPT---------------------E-AR-L-------------DML------VGQAIFGDGAAAAIIGADPDVS-LNE 235 (395)
Q Consensus 200 -~~~~---------------------~-~~-~-------------~~~------~~~~l~GDGAaA~vL~~~~~~~-~~~ 235 (395)
.++- | .. + -+. ..++.++|||+|+||.+.+... .|.
T Consensus 213 ~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~ 292 (418)
T 2iik_A 213 FQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGL 292 (418)
T ss_dssp TTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTC
T ss_pred cccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccCCCCCceEEEEecHHHHHhcCC
Confidence 0000 0 00 0 000 1456789999999998765320 111
Q ss_pred CCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH
Q 016094 236 RPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ 314 (395)
Q Consensus 236 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~ 314 (395)
.+...+.+.+... ..++.. ......+++++|+++|+++ +|| ++=.|-.....--.
T Consensus 293 ~~~a~i~g~~~~~--------------------~~p~~~---~~~~~~a~~~al~~Agl~~-~dId~vE~h~af~~~~~~ 348 (418)
T 2iik_A 293 PILGVLRSYAVVG--------------------VPPDIM---GIGPAYAIPVALQKAGLTV-SDVDIFEINEAFASQAAY 348 (418)
T ss_dssp CCCEEEEEEEEEE--------------------CCGGGG---GGHHHHHHHHHHHHHTCCG-GGEEEEEECCSBHHHHHH
T ss_pred CceEEEEEEEecc--------------------CCchhc---chhHHHHHHHHHHHcCCCH-HHCCeeeeeccchHHHHH
Confidence 1233444332110 011111 1123458899999999997 999 99999765543334
Q ss_pred HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCc-eEEEEEEcccceeeeeeEEec
Q 016094 315 VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLE-YGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 315 i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d-~vll~~~G~G~~~~a~llr~~ 389 (395)
..+.||++++++..+- =...+||...|+-...+.+++.+.. + +.| . +.+....+.|....+++|+..
T Consensus 349 ~~~~lg~~~~~vN~~G-G~~a~GHp~GAsG~~~~~~~~~~L~--~--~~~---~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 349 CVEKLRLPPEKVNPLG-GAVALGHPLGCTGARQVITLLNELK--R--RGK---RAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp HHHHHTCCGGGBCTTC-CHHHHCCCHHHHHHHHHHHHHHHHH--H--HTS---CEEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHcCCCccccCCCC-CeeeecCChhhhHHHHHHHHHHHHH--h--cCC---CeeeEEEEeeccchhheEEEecc
Confidence 4678999877765420 0146999988875554544444311 1 112 2 333333333334457788753
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=181.59 Aligned_cols=272 Identities=15% Similarity=0.112 Sum_probs=179.7
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCc-C----EEEEEecCC---------------------------CCCCCHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKI-T----HLIFGAVYG---------------------------VDMPGAD 142 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~I-d----~li~~s~~~---------------------------~~~p~~a 142 (395)
+.....+....|+.+|+++||+++|+++++| | .|++++..+ ...+..+
T Consensus 94 ~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 173 (451)
T 4ddo_A 94 KELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAA 173 (451)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHH
Confidence 3333444578899999999999999999999 7 688877531 1234567
Q ss_pred HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------CCCC------ch-
Q 016094 143 VRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHF----------HEPT------EA- 205 (395)
Q Consensus 143 ~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~----------~~~~------~~- 205 (395)
.+|+..||++. + .++++.+|+|++.||..|.++|++|.++.|||+++|..+..+ ..+. ..
T Consensus 174 ~~ia~~lgl~G-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 250 (451)
T 4ddo_A 174 GQISIKHRFRG-P--LGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRAS 250 (451)
T ss_dssp HHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSC
T ss_pred HHHHHHhcCCC-c--eeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccc
Confidence 89999999986 4 789999999999999999999999999999999999864210 0000 00
Q ss_pred -hhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHH
Q 016094 206 -RLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDK 283 (395)
Q Consensus 206 -~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 283 (395)
.+.....++++||||+|+||++.+.. ..+..+...+.+.+.... +..+.... + ......+
T Consensus 251 ~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d--------------~~~~~~~~--~--~~~~~~~ 312 (451)
T 4ddo_A 251 RPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTAD--------------AYHMTAGP--D--DGSGAMR 312 (451)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC--------------CSCSSCCC--T--TCHHHHH
T ss_pred cccccCCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecC--------------CCccCCCC--C--CHHHHHH
Confidence 01112357899999999999975421 011123345554432211 10000000 0 0123457
Q ss_pred HHHHhhcccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhh
Q 016094 284 LLADAMSPIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTE 357 (395)
Q Consensus 284 ~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~ 357 (395)
+++++|+++|+++ +|| ++.+|..+..+.+ .+.+.++.. .+++.+ ..-..+||+.+|+-.+.|..++... +
T Consensus 313 ai~~al~~Agl~~-~dId~ve~Hgtgt~~~d~~E~~al~~~~~~~-~~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~l-~ 388 (451)
T 4ddo_A 313 AMKLALRMGDVAP-EQVDYVNAHATSTPVGDAGEIEALKTVFGVG-AGPAIS-STKSATGHLLGAAGAIEAAFSILAL-R 388 (451)
T ss_dssp HHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHCSS-SSCEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHcCCCH-HHcCEEEecCCcCcccCHHHHHHHHHHhCCC-CCCccc-CchhhhccCHHHHHHHHHHHHHHHH-h
Confidence 8899999999997 999 9999988877654 344556542 222211 1355679999998766665544321 1
Q ss_pred hhcccCC----------------------CCCceEEEEEEcccceeeeeeEEeccC
Q 016094 358 ERKATTG----------------------EGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 358 ~g~l~~G----------------------~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
++.+.+- .+..+++.-+||-|.+-++++|+..+.
T Consensus 389 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~~ 444 (451)
T 4ddo_A 389 DGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRYPS 444 (451)
T ss_dssp HTEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEESCC
T ss_pred cCCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCCC
Confidence 1322110 011567888999999999999988654
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=180.51 Aligned_cols=270 Identities=16% Similarity=0.114 Sum_probs=185.1
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCC-cC----EEEEEecC--------------------------C-CCCCCHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSK-IT----HLIFGAVY--------------------------G-VDMPGAD 142 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~-Id----~li~~s~~--------------------------~-~~~p~~a 142 (395)
+..........|+.+|+++||+++|+++++ || .+++++.. + ...+..+
T Consensus 79 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 158 (428)
T 3kzu_A 79 KEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLAS 158 (428)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHH
Confidence 333344457889999999999999999999 87 67777652 1 2344678
Q ss_pred HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCCC------Cch-
Q 016094 143 VRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHEP------TEA- 205 (395)
Q Consensus 143 ~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~~------~~~- 205 (395)
.+|+..||++. + .+.++.+|+|++.||..|.++|++|.++.|||+++|..... +... ...
T Consensus 159 ~~is~~lgl~G-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 235 (428)
T 3kzu_A 159 GHVSIKHKLRG-P--NHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAAS 235 (428)
T ss_dssp HHHHHHHTCCS-C--EECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTC
T ss_pred HHHHHHcCCCC-c--eeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCccccc
Confidence 89999999987 3 68899999999999999999999999999999999983210 0000 000
Q ss_pred -hhhhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHH
Q 016094 206 -RLDMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDK 283 (395)
Q Consensus 206 -~~~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 283 (395)
.+.....++++||||+|+||++.+... .+..+...+.+.+... ++.++. .+. .......+
T Consensus 236 ~pfd~~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~--------------dg~~~~-~p~---~~~~~~~~ 297 (428)
T 3kzu_A 236 RPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSG--------------DAFHIT-APT---ESGEGAQR 297 (428)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEE--------------CCSCSS-SCC---TTCHHHHH
T ss_pred CCcccCCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEcc--------------CCCCCC-CCC---CCHHHHHH
Confidence 112233578999999999999754210 0111234454432211 111000 010 01123457
Q ss_pred HHHHhhcccCCCCCCce-EEEEc----CCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhh
Q 016094 284 LLADAMSPIGISDWNSL-FYIVH----PGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEE 358 (395)
Q Consensus 284 ~i~~~L~~~g~~~~~di-~~i~H----~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~ 358 (395)
+++++|+++|+++ +|| ++.+| +.+...++.+.+.++.+.+++..+ .....+||+.+|+-...|..++... .+
T Consensus 298 ai~~al~~Agl~~-~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~~~l-~~ 374 (428)
T 3kzu_A 298 CMVAALKRAGIVP-DEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMS-STKSSIGHLLGAAGAAEAVFSTLAI-RD 374 (428)
T ss_dssp HHHHHHHHHTCCG-GGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHcCCCH-HHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeC-CchhhhCCCchhhHHHHHHHHHHHh-cc
Confidence 8899999999997 999 99999 777777888889999887776653 2467899999888777776655431 11
Q ss_pred hcccC-----------------C----CCCceEEEEEEcccceeeeeeEEe
Q 016094 359 RKATT-----------------G----EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 359 g~l~~-----------------G----~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+.+.| . .+.++++.-+||.|.+.++++|+.
T Consensus 375 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 425 (428)
T 3kzu_A 375 NIAPATLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRR 425 (428)
T ss_dssp TEECCBTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEee
Confidence 32211 0 011578888999999999999875
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=179.02 Aligned_cols=253 Identities=11% Similarity=0.070 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKE-WGQPVSKITHLIFGAVYG-V-DMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~-agi~~~~Id~li~~s~~~-~-~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||++ +|++++|||.||+++.++ . ..|..+.+++..+|++...+ +++++.+|+|++.+|..|.++|
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~p-a~~v~~~Css~~~Al~~A~~~I 110 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTG-GVQLNRFCASGLEAVNTAAQKV 110 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCE-EEEEC---CBSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCc-eEEecCcChhHHHHHHHHHHHH
Confidence 889999999999999 999999999999999887 3 36789999999999954443 8999999999999999999999
Q ss_pred HcCCCCeEEEEEecccccc-c-----------------------------------------------------------
Q 016094 180 ENNPGARVLVVCCDITVLH-F----------------------------------------------------------- 199 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~~-~----------------------------------------------------------- 199 (395)
++|.++.||++++|.++.. +
T Consensus 111 ~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~ 190 (407)
T 3svk_A 111 RSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGY 190 (407)
T ss_dssp HHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999987740 0
Q ss_pred ----------------CCCCch-----hhh------------------------------------hhhhhhhhccccEE
Q 016094 200 ----------------HEPTEA-----RLD------------------------------------MLVGQAIFGDGAAA 222 (395)
Q Consensus 200 ----------------~~~~~~-----~~~------------------------------------~~~~~~l~GDGAaA 222 (395)
.+|+.. +.+ .......++|||+|
T Consensus 191 ~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaa 270 (407)
T 3svk_A 191 FAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAAL 270 (407)
T ss_dssp TTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCCCBTTTBCCBEEEEEE
T ss_pred cccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccccccccccccccCcccCceeE
Confidence 000000 000 00122348899999
Q ss_pred EEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-
Q 016094 223 AIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL- 300 (395)
Q Consensus 223 ~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di- 300 (395)
+||++.+... .+..+..++.+.+... .+ +. . + ......+++++|+++|+++ +||
T Consensus 271 vvL~s~~~A~~~g~~~~a~i~g~~~~~----~~-------p~---~-~--------~~~~~~a~~~al~~Agl~~-~dId 326 (407)
T 3svk_A 271 VLVGSEKAGKSQGLTPRARIVATATSG----SD-------PV---I-M--------LTGPTPATRKVLDRAGLTI-DDID 326 (407)
T ss_dssp EEEECHHHHHHTTCCCCEEEEEEEEC---------------------C--------CCTHHHHHHHHHHHHTCCG-GGCS
T ss_pred EEEeeHHHHHHcCCCCcEEEEEEEEec----cC-------Cc---c-c--------cHHHHHHHHHHHHHcCCCH-HHCC
Confidence 9998764210 1112334555433210 00 00 0 0 0112367889999999997 999
Q ss_pred EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccce
Q 016094 301 FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGIT 380 (395)
Q Consensus 301 ~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~ 380 (395)
++-+|..+......+.+.||++++++..+ --..-+||...++-...+.+++.+.. + +.+ .+.|....+.|..
T Consensus 327 ~~e~hdaf~~~~l~~~~~lg~~~~~vn~~-Gg~~~~GHp~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~ 398 (407)
T 3svk_A 327 LFELNEAFASVVLKFQKDLNIPDEKLNVN-GGAIAMGHPLGATGAMITGTMVDELE--R--RNA---RRALITLCIGGGM 398 (407)
T ss_dssp EEEECCSBHHHHHHHHHHHTCCGGGBSTT-CCHHHHCBCGGGHHHHHHHHHHHHHH--H--HTC---CEEEEEEECSSSC
T ss_pred EEEEeChhHHHHHHHHHHhCCCCCCCCCC-CcHhheeCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEeeccCcc
Confidence 99999999888778889999999887653 12345899998886666665555411 1 123 5656555565666
Q ss_pred eeeeeEEe
Q 016094 381 VETVVLRS 388 (395)
Q Consensus 381 ~~a~llr~ 388 (395)
..+++|+.
T Consensus 399 g~a~~~e~ 406 (407)
T 3svk_A 399 GVATIIER 406 (407)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEc
Confidence 66777764
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-18 Score=172.20 Aligned_cols=266 Identities=14% Similarity=0.089 Sum_probs=178.7
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHcCC-CCCCcC----EEEEEecCC---------------------------CCCCCH
Q 016094 94 ARHAMLIEEVPKLGKEAALKAIKEWGQ-PVSKIT----HLIFGAVYG---------------------------VDMPGA 141 (395)
Q Consensus 94 ~~~~~~~~~~~~la~~Aa~~aL~~agi-~~~~Id----~li~~s~~~---------------------------~~~p~~ 141 (395)
.+..........|+.+|+++||+++|+ ++++|| .+++++... ...+..
T Consensus 68 ~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (412)
T 4ewg_A 68 RKKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTT 147 (412)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHH
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHH
Confidence 333344455788999999999999999 788888 888887652 123467
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----c-----CCC-----Cch--
Q 016094 142 DVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----F-----HEP-----TEA-- 205 (395)
Q Consensus 142 a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----~-----~~~-----~~~-- 205 (395)
+.+|+..||++. + .+.++.+|+|++.||..|.++|++|.++.|||+++|.++.. | ..+ ...
T Consensus 148 a~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~r 224 (412)
T 4ewg_A 148 AVNVSLFWDLKG-R--IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTPR 224 (412)
T ss_dssp HHHHHHHTTCCS-C--EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCCC
T ss_pred HHHHHHHhCCCC-C--cccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCCC
Confidence 889999999987 4 78999999999999999999999999999999999986531 0 000 000
Q ss_pred hhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHH
Q 016094 206 RLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKL 284 (395)
Q Consensus 206 ~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 284 (395)
.+.....++++||||+++||++.+.. ..|.....++.+.+.. .++.+++ .+ ......++
T Consensus 225 pfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~--------------~dg~~~~-~p-----~~~~~~~a 284 (412)
T 4ewg_A 225 PFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCN--------------SDGAHMT-QP-----TASTMARA 284 (412)
T ss_dssp TTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEE--------------ECSSCSS-SC-----CHHHHHHH
T ss_pred CCCCCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEc--------------CCCCCCC-CC-----CHHHHHHH
Confidence 01222357899999999999985421 0011233455543321 1111110 11 13456688
Q ss_pred HHHhhcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhh
Q 016094 285 LADAMSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEE 358 (395)
Q Consensus 285 i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~ 358 (395)
++++|+++|+++ +|| ++.+|..+..+-+. +.+.++-. ++.+ ..-..+||+.+|+-.+.+..++... ++
T Consensus 285 i~~Al~~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~---~~v~-s~K~~~GH~~gAsG~~~~~~~~~~l-~~ 358 (412)
T 4ewg_A 285 MQLALEDAKLDA-NAIAYVNAHGTSTDRGDVAESQATARTFGER---MPIS-SLKSYVGHTLGACGALEAWWTIEMM-KR 358 (412)
T ss_dssp HHHHHHHTTCCG-GGEEEEECCCCCCHHHHHHHHHHHHHHHCTT---CEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHcCCCH-HHCCEEEccCCCCccccHHHHHHHHHHcCCC---Ceee-CccccccccHHHHHHHHHHHHHHHH-hc
Confidence 999999999997 999 99999998876553 34555522 2211 1345679999998666555444321 01
Q ss_pred hcccC---------C-------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 359 RKATT---------G-------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 359 g~l~~---------G-------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+.+.| . .+.++++.-+||-|.+.++++|+.
T Consensus 359 ~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~ 410 (412)
T 4ewg_A 359 NWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRR 410 (412)
T ss_dssp TEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEEC
T ss_pred CCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEee
Confidence 22211 0 011678999999999999999975
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.1e-19 Score=173.63 Aligned_cols=259 Identities=13% Similarity=0.070 Sum_probs=174.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C--------------------------CCCCHHHHHHHHcC
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V--------------------------DMPGADVRLMNLLG 150 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~--------------------------~~p~~a~~l~~~LG 150 (395)
....|+.+|+++||+++|+++++|| +|++++.++ + ..+..+.+|+..||
T Consensus 78 ~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 157 (415)
T 1tqy_B 78 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 157 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhC
Confidence 3678999999999999999999999 899888743 1 23567899999999
Q ss_pred CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccc-ccc---------cCC----CCch--hhhhhhhhh
Q 016094 151 LEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDIT-VLH---------FHE----PTEA--RLDMLVGQA 214 (395)
Q Consensus 151 l~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~-s~~---------~~~----~~~~--~~~~~~~~~ 214 (395)
++. + .+.++.+|+|++.||..|.++|++| ++.|||+++|.. +.. ... |... .+.....++
T Consensus 158 l~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~~~~G~ 233 (415)
T 1tqy_B 158 MRG-P--SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDERAAGY 233 (415)
T ss_dssp CCS-S--CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTSTTCCCB
T ss_pred CCC-c--eEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCCCCCCc
Confidence 986 3 7899999999999999999999999 999999999983 210 011 1100 011223578
Q ss_pred hhccccEEEEEecCCCCC-CCC-CCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhccc
Q 016094 215 IFGDGAAAAIIGADPDVS-LNE-RPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPI 292 (395)
Q Consensus 215 l~GDGAaA~vL~~~~~~~-~~~-~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~ 292 (395)
++||||+|+||++.+... .|. ....++.+.+.. .++.+++ .+.. ...++++++|+++
T Consensus 234 ~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~--------------~dg~~~~-~p~~------~~~~ai~~al~~A 292 (415)
T 1tqy_B 234 VPGEGGAILVLEDSAAAEARGRHDAYGELAGCAST--------------FDPAPGS-GRPA------GLERAIRLALNDA 292 (415)
T ss_dssp CBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEE--------------ECCCTTC-CCCC------SHHHHHHHHHHHH
T ss_pred ceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEc--------------cCCCCCC-CCCH------HHHHHHHHHHHHc
Confidence 999999999999764310 011 123455543321 1111100 1111 3557899999999
Q ss_pred CCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC---
Q 016094 293 GISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT--- 363 (395)
Q Consensus 293 g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~--- 363 (395)
|+++ +|| ++.+|..+..+-+. +.+.++-..-.+.. .-..+||+.+|+-.+.|..++.... ++.+.+
T Consensus 293 gl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~v~s---~K~~~GH~~gAaG~~~~~~~~~~l~-~~~ipp~~~ 367 (415)
T 1tqy_B 293 GTGP-EDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTV---PKTTTGRLYSGGGPLDVVTALMSLR-EGVIAPTAG 367 (415)
T ss_dssp TCCG-GGCCEEECCCCCSHHHHHHHHHHHHHHHCTTCSEEEC---GGGGTCBCGGGHHHHHHHHHHHHHH-HTSBCCBCS
T ss_pred CCCH-hHCCEEEEeCCCCcCcCHHHHHHHHHHhCCCCceEec---cchhhccChHHHHHHHHHHHHHHHh-cCCcCCCCC
Confidence 9997 999 99999998876553 34455532111111 2445899999987777665554311 122110
Q ss_pred --------------C----CCCceEEEEEEcccceeeeeeEEecc
Q 016094 364 --------------G----EGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 364 --------------G----~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
. .+..+++.-+||.|.+-++++|+..+
T Consensus 368 ~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 368 VTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRRFA 412 (415)
T ss_dssp CCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC-
T ss_pred CCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEEEEEEecCC
Confidence 0 01267899999999999999998754
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.3e-19 Score=174.30 Aligned_cols=226 Identities=13% Similarity=0.078 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEW-GQPVSKITHLIFGAVYG-VD-MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~a-gi~~~~Id~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++ |+++++||.|++++.++ .. .|..+.+++..+|++...+ +++++.+|+|++.||.+|.++|
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~v~~aCss~l~Al~~A~~~I 105 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVP-AVTVNRLCGSSMQALHDAARMI 105 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSC-CEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCc-EeEecCcchHHHHHHHHHHHHH
Confidence 8899999999999999 99999999999999887 43 6889999999999974333 8999999999999999999999
Q ss_pred HcCCCCeEEEEEecccccc-c-----------------------------------------------------------
Q 016094 180 ENNPGARVLVVCCDITVLH-F----------------------------------------------------------- 199 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~~-~----------------------------------------------------------- 199 (395)
++|.++.|||+++|.++.. +
T Consensus 106 ~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f 185 (387)
T 3goa_A 106 MTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAF 185 (387)
T ss_dssp HTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCc
Confidence 9999999999999987631 0
Q ss_pred CCC-----------------Cchhh---------------hh-------hhhhhhhccccEEEEEecCCCC-CCCCCCce
Q 016094 200 HEP-----------------TEARL---------------DM-------LVGQAIFGDGAAAAIIGADPDV-SLNERPLF 239 (395)
Q Consensus 200 ~~~-----------------~~~~~---------------~~-------~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~ 239 (395)
.+. .|... -+ .......+|||+|+||.+.+.. ..+..+..
T Consensus 186 ~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a 265 (387)
T 3goa_A 186 KTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRA 265 (387)
T ss_dssp TTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCE
T ss_pred ccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccE
Confidence 000 00000 00 0233457899999999876421 01122334
Q ss_pred EEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHH
Q 016094 240 QVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQN 318 (395)
Q Consensus 240 ~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~ 318 (395)
.+.+.+.... ++... ......+++++|+++|+++ +|| ++-+|...........+.
T Consensus 266 ~i~g~~~~~~--------------------~~~~~---~~~~~~a~~~al~~agl~~-~did~ve~h~~f~~~~~~~~~~ 321 (387)
T 3goa_A 266 RIRSMAVVGC--------------------DPSIM---GYGPVPASKLALKKAGLSA-SDIDVFEMNEAFAAQILPCIKD 321 (387)
T ss_dssp EEEEEEEEEC--------------------CTTST---TCTHHHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHH
T ss_pred EEEEEEEcCC--------------------CCCcc---hHHHHHHHHHHHHHcCCCH-HHcCEEEEeCcchHHHHHHHHH
Confidence 5554432210 00000 0122467889999999997 999 999999988877778899
Q ss_pred cCC---CcccchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 319 LGL---GKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 319 lgi---~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
||+ +.+++..+ --...+||...|+-...+.+++.+
T Consensus 322 lg~~~~~~~~vn~~-gg~~~~GH~~gasG~~~~~~~~~~ 359 (387)
T 3goa_A 322 LGLMEQIDEKINLN-GGAIALGHPLGCSGARISTTLINL 359 (387)
T ss_dssp TTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred hCCCcCCCccCCCC-CchhcccCCHHHHHHHHHHHHHHH
Confidence 999 55555432 113458999776665555555543
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-18 Score=169.64 Aligned_cols=253 Identities=15% Similarity=0.114 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.+++++..+ ...+..+.+++..+|+++..+ ++.++.+|+|++.||..|.++|++
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p-~~~v~~aCaSgl~Al~~A~~~I~~ 105 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT-AWGMNQLCGSGLRAVALGMQQIAT 105 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE-EEEEECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce-EEEecccchHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998877 556789999999999985222 789999999999999999999999
Q ss_pred CCCCeEEEEEeccccc-ccC-------CC-----Cch----------------------------hhh------------
Q 016094 182 NPGARVLVVCCDITVL-HFH-------EP-----TEA----------------------------RLD------------ 208 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~-~~~-------~~-----~~~----------------------------~~~------------ 208 (395)
|.++.||++++|.++. .+. .. .+. +++
T Consensus 106 G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~ 185 (392)
T 2vu1_A 106 GDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNK 185 (392)
T ss_dssp TSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 9999999999998753 110 00 000 000
Q ss_pred ------------------------------h---h----------------hhhhh-------hccccEEEEEecCCCCC
Q 016094 209 ------------------------------M---L----------------VGQAI-------FGDGAAAAIIGADPDVS 232 (395)
Q Consensus 209 ------------------------------~---~----------------~~~~l-------~GDGAaA~vL~~~~~~~ 232 (395)
+ + ..+++ +||||+|+||++.+...
T Consensus 186 A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~ 265 (392)
T 2vu1_A 186 AEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEAS 265 (392)
T ss_dssp HHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHH
T ss_pred HHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCeeCcccCCccChhheeeEecHHHHH
Confidence 0 0 11457 99999999998765320
Q ss_pred -CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChH
Q 016094 233 -LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKV 310 (395)
Q Consensus 233 -~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~ 310 (395)
.+..+..++.+.+.... .+.. .......+++++|+++|+++ +|| ++-+|-....
T Consensus 266 ~~g~~~~a~i~g~~~~~~--------------------~p~~---~~~~~~~a~~~al~~agl~~-~dId~ie~~d~f~~ 321 (392)
T 2vu1_A 266 RRGIQPLGRIVSWATVGV--------------------DPKV---MGTGPIPASRKALERAGWKI-GDLDLVEANEAFAA 321 (392)
T ss_dssp HHTCCCSEEEEEEEEEEC--------------------CGGG---GGGTHHHHHHHHHHHHTCCG-GGCSEEEECCSBHH
T ss_pred hcCCCccEEEEEEEEeec--------------------Chhh---cchhHHHHHHHHHHHcCCCH-HHcCEEEeccccHH
Confidence 11123355655432210 0111 11233568899999999997 999 9999988776
Q ss_pred HHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 311 ILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 311 ~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
..-.+.+.||++++++..+ -....+||+.+|+-...+.+++.+.. + +.+ .+.|....+.|...++++|+.
T Consensus 322 ~~l~~~~~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 322 QACAVNKDLGWDPSIVNVN-GGAIAIGHPIGASGARILNTLLFEMK--R--RGA---RKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp HHHHHHHHHCCCGGGBSTT-CCHHHHCCCGGGHHHHHHHHHHHHHH--H--HTC---SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHcCCCcccCCCC-ccHhhhCCChhhHHHHHHHHHHHHHh--c--cCC---CEEEEEEecccchheEEEEEe
Confidence 6666889999998877542 23567999999988887777766521 1 123 455543323345666778764
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-18 Score=169.15 Aligned_cols=253 Identities=16% Similarity=0.095 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VD-MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|+++++||.|++++.++ +. .|..+.+++..||++...+ +++++.+|+|++.||..|.++|+
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p-~~~v~~aCas~~~Al~~A~~~I~ 104 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA-GCTVNRLCGSGLEAVAQAARAIW 104 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE-EEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCcc-EeeccccchHHHHHHHHHHHHHH
Confidence 889999999999999999999999999998887 44 6889999999999963222 78999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc-ccC----------------CC-------Cchhhh----------------------------
Q 016094 181 NNPGARVLVVCCDITVL-HFH----------------EP-------TEARLD---------------------------- 208 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~-~~~----------------~~-------~~~~~~---------------------------- 208 (395)
+|.++.||++++|.++. .+. +. ....+.
T Consensus 105 ~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~ 184 (401)
T 1ulq_A 105 AGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRF 184 (401)
T ss_dssp TTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHHHHHHHHHHHhCCCHHHHHHH
Confidence 99999999999998764 110 00 000000
Q ss_pred ----------h------------------------------------------h--h--hhhh-------hccccEEEEE
Q 016094 209 ----------M------------------------------------------L--V--GQAI-------FGDGAAAAII 225 (395)
Q Consensus 209 ----------~------------------------------------------~--~--~~~l-------~GDGAaA~vL 225 (395)
+ + + .+++ ++|||+|+||
T Consensus 185 a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~~G~vt~~~~~~~~dGAaavvL 264 (401)
T 1ulq_A 185 ALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLL 264 (401)
T ss_dssp HHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSSTTCSCBGGGBCCCEEEEEEEEE
T ss_pred HHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCCCCCeechhcCCccchheEEEE
Confidence 0 0 0 0123 5999999999
Q ss_pred ecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEE
Q 016094 226 GADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYI 303 (395)
Q Consensus 226 ~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i 303 (395)
++.+... .|..+..++.+.+.... .+... ......+++++|+++|+++ +|| ++-
T Consensus 265 ~s~~~A~~~g~~~~a~i~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ie 320 (401)
T 1ulq_A 265 VSDDYAKAHGLRPLARVRAIAVAGV--------------------PPRIM---GIGPVPATRKALERAGLSF-SDLGLIE 320 (401)
T ss_dssp EEHHHHHHTTCCCSEEEEEEEEEEC--------------------CGGGG---GGTHHHHHHHHHHHTTCCG-GGCSEEE
T ss_pred ecHHHHHHcCCCceEEEEEEEEecC--------------------Ccccc---chhHHHHHHHHHHHcCCCH-HHcCEEE
Confidence 8765320 11223355655432210 01111 1223468889999999997 999 999
Q ss_pred EcCCChHHHHHHHHHcCC--CcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEccccee
Q 016094 304 VHPGGKVILDQVEQNLGL--GKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITV 381 (395)
Q Consensus 304 ~H~~~~~~~~~i~~~lgi--~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~ 381 (395)
.|-.....--...+.||+ +.+++..+ --..-+||...|+-...+.+++.+.. + +.+ .+.|..++|.|...
T Consensus 321 ~heafa~~~l~~~~~lg~~~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~ 392 (401)
T 1ulq_A 321 LNEAFAAQALAVLREWSLSMEDQRLNPN-GGAIALGHPLGASGARILTTLVHEMR--R--RKV---QFGLATMCIGVGQG 392 (401)
T ss_dssp ECCSBHHHHHHHHHHHTCCTTCTTBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--TTC---SEEEEEEEETTTEE
T ss_pred EecchHHHHHHHHHHcCCCCCCCccCCC-CcccccCCCcchHHHHHHHHHHHHHh--h--cCC---CEEEEEeecCCccc
Confidence 998766443344567898 55555432 12345899998877766666665411 1 123 67777777777777
Q ss_pred eeeeEEe
Q 016094 382 ETVVLRS 388 (395)
Q Consensus 382 ~a~llr~ 388 (395)
.+++|+.
T Consensus 393 ~a~v~~~ 399 (401)
T 1ulq_A 393 IAVVVEG 399 (401)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7888875
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.1e-18 Score=167.90 Aligned_cols=253 Identities=17% Similarity=0.121 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
..+|+.+|+++||+++|+++++||.+++++..+ +..+..+.+++..+|++...+ .+.++.+|+|++.||..|.++|++
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p-~~~v~~aCaSg~~Ai~~A~~~I~~ 108 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVP-AWSCQMICGSGLKAVCLAVQSIGI 108 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC-EEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCcc-EEEecCcChhHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998877 556789999999999953222 789999999999999999999999
Q ss_pred CCCCeEEEEEecccccc-cCC------------------------C----------------------------------
Q 016094 182 NPGARVLVVCCDITVLH-FHE------------------------P---------------------------------- 202 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~~-~~~------------------------~---------------------------------- 202 (395)
|.++.||++++|.++.. +.. +
T Consensus 109 G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~ 188 (397)
T 1wl4_A 109 GDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNR 188 (397)
T ss_dssp TSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 99999999999987631 100 0
Q ss_pred -----------------------------Cchhh----------hhh--h-h---hhh-------hccccEEEEEecCCC
Q 016094 203 -----------------------------TEARL----------DML--V-G---QAI-------FGDGAAAAIIGADPD 230 (395)
Q Consensus 203 -----------------------------~~~~~----------~~~--~-~---~~l-------~GDGAaA~vL~~~~~ 230 (395)
.|..+ ..+ + . +++ +||||+|+||++.+.
T Consensus 189 A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~ 268 (397)
T 1wl4_A 189 TENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSE 268 (397)
T ss_dssp HHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHH
T ss_pred HHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHH
Confidence 00000 000 0 0 346 899999999987543
Q ss_pred C-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCC
Q 016094 231 V-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGG 308 (395)
Q Consensus 231 ~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~ 308 (395)
. ..+..+..++.+.+.... .+.. .......+++++|+++|+++ +|| +|-+|...
T Consensus 269 A~~~g~~~~a~i~g~~~~~~--------------------~p~~---~~~~~~~a~~~al~~Agl~~-~dId~ie~~d~f 324 (397)
T 1wl4_A 269 ADKRGLTPLARIVSWSQVGV--------------------EPSI---MGIGPIPAIKQAVTKAGWSL-EDVDIFEINEAF 324 (397)
T ss_dssp HHHTTCCCSEEEEEEEEEEC--------------------CGGG---GGGTHHHHHHHHHHHHTCCG-GGCCEEEECCSB
T ss_pred HHHcCCCccEEEEEEEEeec--------------------Chhh---ccchHHHHHHHHHHHcCCCH-HHCCEEEEeccc
Confidence 2 011223455655432210 0110 11233568889999999997 999 99999988
Q ss_pred hHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 309 KVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 309 ~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
......+.+.||++++++..+ .....+||+..|+-...+.+++.+.. + +.+ .+.|....+.|....+++|+.
T Consensus 325 ~~~~l~~~~~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 325 AAVSAAIVKELGLNPEKVNIE-GGAIALGHPLGASGCRILVTLLHTLE--R--MGR---SRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp HHHHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---CEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCcCcCCC-cCccccCCChhhhHHHHHHHHHHHHh--h--cCC---CEEEEEEecccchheEEEEEe
Confidence 777777889999988776542 24677999999886666665555411 1 123 555655444455556888875
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5.7e-18 Score=166.82 Aligned_cols=249 Identities=15% Similarity=0.149 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCC-CccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLE-PSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~-~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
..+|+.+|+++||+++|+++++||.+++++..+ ...+..+.+++..||++ ..+ +++++.+|+|++.||..|.++|+
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p--~~~v~~aCaS~~~Al~~A~~~I~ 109 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTP--CTTINKVCASGMKAIMMASQSLM 109 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCC--EEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCce--EEEecccccHHHHHHHHHHHHHH
Confidence 788999999999999999999999999998877 56678899999999995 334 78999999999999999999999
Q ss_pred cCCCCeEEEEEecccccc-c--------------------CCC---C-------------ch---hhhh-----------
Q 016094 181 NNPGARVLVVCCDITVLH-F--------------------HEP---T-------------EA---RLDM----------- 209 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~~-~--------------------~~~---~-------------~~---~~~~----------- 209 (395)
+|.++.||++++|.++.. + ... . .. ++++
T Consensus 110 ~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~ 189 (395)
T 2ib8_A 110 CGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTR 189 (395)
T ss_dssp TTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 999999999999986531 1 000 0 00 0000
Q ss_pred ---------------------------------------------------hhhhhh-------hccccEEEEEecCCCC
Q 016094 210 ---------------------------------------------------LVGQAI-------FGDGAAAAIIGADPDV 231 (395)
Q Consensus 210 ---------------------------------------------------~~~~~l-------~GDGAaA~vL~~~~~~ 231 (395)
...+++ +||||+|+||++.+..
T Consensus 190 a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A 269 (395)
T 2ib8_A 190 SKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAA 269 (395)
T ss_dssp HHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHH
T ss_pred HHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHHHH
Confidence 002455 8999999999976532
Q ss_pred C-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCCh
Q 016094 232 S-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGK 309 (395)
Q Consensus 232 ~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~ 309 (395)
. .+..+..++.+.+... + .+..+ ......+++++|+++|+++ +|| ++-+|-...
T Consensus 270 ~~~g~~~~a~I~g~~~~~---~-----------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ie~~D~f~ 325 (395)
T 2ib8_A 270 KRLNVTPLARIVAFADAA---V-----------------EPIDF---PIAPVYAASMVLKDVGLKK-EDIAMWEVNEAFS 325 (395)
T ss_dssp HHTTCCCCEEEEEEEEEE---C-----------------CGGGG---GGHHHHHHHHHHHHHTCCG-GGEEEEEECCSBH
T ss_pred HhcCCCccEEEEEEEEec---c-----------------Chhhc---cccHHHHHHHHHHHcCCCH-HHcCEEEEccccH
Confidence 0 1122334555543211 0 01111 1224468899999999997 999 999998876
Q ss_pred HHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEE-EEEcccceeeeeeEEe
Q 016094 310 VILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVL-FGFGPGITVETVVLRS 388 (395)
Q Consensus 310 ~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll-~~~G~G~~~~a~llr~ 388 (395)
...-...+.||++++++..+ -....+||+.+|+-...+.+++.+ ++.| .+.+. +..|.| ...+++|+.
T Consensus 326 ~~~l~~~e~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~------L~~~---~~gl~~~~~ggG-~g~a~~~~~ 394 (395)
T 2ib8_A 326 LVVLANIKMLEIDPQKVNIN-GGAVSLGHPIGMSGARIVGHLTHA------LKQG---EYGLASICNGGG-GASAMLIQK 394 (395)
T ss_dssp HHHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHH------SCTT---CEEEEEEEETTT-EEEEEEEEE
T ss_pred HHHHHHHHHcCCCccccCCC-cchhhcCCChhHHHHHHHHHHHHH------HhhC---CceEEEEecccC-HhheEEEEc
Confidence 55555567799988776542 235679999999988888888876 5545 55554 334433 444677764
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.6e-17 Score=163.89 Aligned_cols=328 Identities=14% Similarity=0.126 Sum_probs=198.6
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
|.|+|+|...|.-. +.+++.+.+.. .. ....++. +|-.+..++..|.-. .-. .++. . -+..+..
T Consensus 30 vaI~G~g~~~p~g~-~~~~~w~~l~~-g~-~~i~~~~---~~~~~~~~~~~~~~~-~v~---~d~~--~----~~~~~~~ 93 (434)
T 2gp6_A 30 VVVTGIAMTTALAT-DAETTWKLLLD-RQ-SGIRTLD---DPFVEEFDLPVRIGG-HLL---EEFD--H----QLTRIEL 93 (434)
T ss_dssp EEEEEEEEECSSCS-SHHHHHHHHHT-TC-CCEEECC---CHHHHHHCCSCCEEE-CCS---CCST--T----SSCHHHH
T ss_pred EEEEeeEEeCCCCC-CHHHHHHHHHc-CC-CeeeeCC---ccccccccCccceeE-EcC---Cchh--h----hCCHHHH
Confidence 99999999999874 77777776531 10 0000000 010001222222111 000 0010 0 0223333
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCC---CCCcCEEEEEecCC-C-----------------CC--------C-CHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQP---VSKITHLIFGAVYG-V-----------------DM--------P-GADVRLMN 147 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~---~~~Id~li~~s~~~-~-----------------~~--------p-~~a~~l~~ 147 (395)
........|+.+|+++||+++|++ +++|+ |++++.++ + .. + ..+.+|+.
T Consensus 94 ~~~d~~~~l~l~aa~~ALedAG~~~~~~~~ig-v~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~ 172 (434)
T 2gp6_A 94 RRMGYLQRMSTVLSRRLWENAGSPEVDTNRLM-VSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGL 172 (434)
T ss_dssp HTCCHHHHHHHHHHHHHHHHTTCCCCCTTSEE-EEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHhcCCCccCCCceE-EEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhh
Confidence 444567899999999999999984 44554 66666543 2 11 2 46789999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----------cCC-----CCch--hhhh
Q 016094 148 LLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----------FHE-----PTEA--RLDM 209 (395)
Q Consensus 148 ~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----------~~~-----~~~~--~~~~ 209 (395)
.||++. + ++.+..+|+|++.||..|.++|++|.++.||++++|..+.. ... |... .+..
T Consensus 173 ~lgl~G-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~ 249 (434)
T 2gp6_A 173 ERHAKA-G--VMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDR 249 (434)
T ss_dssp HSCCCS-C--EECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBT
T ss_pred hhcCCC-C--eEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccc
Confidence 999985 3 78999999999999999999999999999999999986531 111 1111 0111
Q ss_pred hhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHh
Q 016094 210 LVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADA 288 (395)
Q Consensus 210 ~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 288 (395)
...++++||||+|+||++.+.. ..|.....++.+.+.. .++.++. .+. .......++++++
T Consensus 250 ~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~--------------~Dg~~~~-~p~---~~~~~~~~ai~~a 311 (434)
T 2gp6_A 250 DRDGFVFGEGGALLLIETEEHAKARGANILARIMGASIT--------------SDGFHMV-APD---PNGERAGHAITRA 311 (434)
T ss_dssp TCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEE--------------ECCSCSS-SCC---TTCHHHHHHHHHH
T ss_pred cCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEe--------------cCCCCCC-CCC---CChHHHHHHHHHH
Confidence 2357899999999999875421 0011123445443221 1111100 010 0123456789999
Q ss_pred hcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhccc
Q 016094 289 MSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362 (395)
Q Consensus 289 L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~ 362 (395)
|+++|+++ +|| ++.+|..+..+.+. +.+.++-. ++..+ .....+||+.+|+-.+.|..++... +.+.+.
T Consensus 312 l~~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~--~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~l-~~~~ip 386 (434)
T 2gp6_A 312 IQLAGLAP-GDIDHVNAHATGTQVGDLAEGRAINNALGGN--RPAVY-APKSALGHSVGAVGAVESILTVLAL-RDQVIP 386 (434)
T ss_dssp HHHTTCCT-TTEEEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEEC-CTHHHHCBCTTTHHHHHHHHHHHHH-HHSCCC
T ss_pred HHHcCCCH-HHcCEEEEeCCcCccchHHHHHHHHHHhccC--CCCcc-cchhhhcCchhhhHHHHHHHHHHHH-hcCccC
Confidence 99999997 999 99999887776443 34445422 22221 1467899999998777766555431 113332
Q ss_pred CC---------------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 363 TG---------------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 363 ~G---------------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
|- .+..+++.-+||.|.+-.+++|+.
T Consensus 387 p~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 387 PTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp CCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 10 012578888999999988888863
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-18 Score=171.56 Aligned_cols=261 Identities=14% Similarity=0.081 Sum_probs=173.7
Q ss_pred hHHHHHHHHHHHHHHHcCC-CCCCcC----EEEEEecCCC------------------CC---------CCHHHHHHHHc
Q 016094 102 EVPKLGKEAALKAIKEWGQ-PVSKIT----HLIFGAVYGV------------------DM---------PGADVRLMNLL 149 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi-~~~~Id----~li~~s~~~~------------------~~---------p~~a~~l~~~L 149 (395)
...+|+.+|+++||+++|+ ++++|| .|+++++.+. .. ...+.+|+..|
T Consensus 87 ~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 166 (431)
T 2ix4_A 87 NFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKY 166 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHH
Confidence 4678999999999999999 988888 5777765421 11 24788999999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccccc----------CC------CCch--hhhhhh
Q 016094 150 GLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHF----------HE------PTEA--RLDMLV 211 (395)
Q Consensus 150 Gl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~----------~~------~~~~--~~~~~~ 211 (395)
|++. + ++.++.+|+|++.||..|.++|++|.++.|||+++|.++... .. |... .+....
T Consensus 167 gl~g-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 243 (431)
T 2ix4_A 167 GFQG-P--NHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDR 243 (431)
T ss_dssp TCCS-C--EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTC
T ss_pred CCCC-c--eeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCCC
Confidence 9986 4 789999999999999999999999999999999999764310 00 0000 011223
Q ss_pred hhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhc
Q 016094 212 GQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMS 290 (395)
Q Consensus 212 ~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 290 (395)
.++++||||+|+||++.+... .|.....++.+.+... ++.++. .+.. ......++++++|+
T Consensus 244 ~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~--------------dg~~~~-~p~~---~~~~~~~ai~~al~ 305 (431)
T 2ix4_A 244 DGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSG--------------DAHHIT-QPPE---DGKGAVLAMTRALR 305 (431)
T ss_dssp CSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCSS-CCCT---TCHHHHHHHHHHHH
T ss_pred CCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecC--------------CCCCCC-CCCC---CHHHHHHHHHHHHH
Confidence 568999999999998754210 0011234454433211 111000 0100 12345678999999
Q ss_pred ccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCc--ccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhccc
Q 016094 291 PIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGK--EKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKAT 362 (395)
Q Consensus 291 ~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~--ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~ 362 (395)
++|+++ +|| ++.+|..+..+.+ .+.+.++... ++++.+ .....+||+.+|+-.+.|..++... +++.+.
T Consensus 306 ~agl~~-~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~l-~~~~ip 382 (431)
T 2ix4_A 306 QSGLCP-NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFS-STKGATGHLLGAAGAVEAIFSILAI-HHGVAP 382 (431)
T ss_dssp HHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HHTEEC
T ss_pred HcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceee-cchhhhcccHHHHHHHHHHHHHHHH-hcCCcC
Confidence 999997 999 9999998877544 3444444221 233321 1356899999999777766655431 113221
Q ss_pred C------------------------CCCCceEEEEEEcccceeeeeeEEe
Q 016094 363 T------------------------GEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 363 ~------------------------G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
| + ..+++.-+||.|.+-.+++|+.
T Consensus 383 p~~~~~~~~p~~~~~~v~~~~~~~~~--~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 383 MTLNVKNPDPIFDKRFMPLTTSKKML--VRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp CCTTCSSBCTTCCSSSCCCSSCEECC--CSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCCcccCCccccccCC--CCEEEEecccCCCeeEEEEEee
Confidence 0 1 1578888999999988888863
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-17 Score=166.53 Aligned_cols=322 Identities=14% Similarity=0.103 Sum_probs=200.7
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeec---hhhhhcCCCCcCCCCCCHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLT---EEILKENPNMSCYKAPSLDA 94 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~---~~~~~~~~~~~~~~~~~~~~ 94 (395)
|.|+|+|+..|.- .+.+++.+.+.. .. ....++ .+ +...++..+....+ .+.+ . ..
T Consensus 25 V~ItG~g~~~p~g-~~~~~~w~~l~~-g~-~~i~~~----~~-~~~~~~~~~~~g~~~fd~~~~-i------------~~ 83 (428)
T 3mqd_A 25 VVVTGMGIVSSIG-SNTEEVTASLRE-AK-SGISRA----EE-YAELGFRCQVHGAPDIDIESL-V------------DR 83 (428)
T ss_dssp EEEEEEEEEBTTB-SSHHHHHHHHHH-TC-CCEEEC----HH-HHHTTCSCCEEECCCCCHHHH-S------------CT
T ss_pred EEEEeeEEECCCc-CCHHHHHHHHHc-CC-CcceeC----Cc-ccccCCCcccccccCCChhhc-C------------CH
Confidence 9999999999986 577777777632 11 000001 01 12234444322111 0000 0 00
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-CC--------------------------CCCHHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-VD--------------------------MPGADV 143 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~~--------------------------~p~~a~ 143 (395)
+.........+|+.+|+++||+++|+++++|| +|++++..+ +. .+..+.
T Consensus 84 ~~~~~~d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 163 (428)
T 3mqd_A 84 RAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASA 163 (428)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHH
Confidence 11111224788999999999999999999998 788887643 11 345789
Q ss_pred HHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccccc---------CC------CCch--h
Q 016094 144 RLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHF---------HE------PTEA--R 206 (395)
Q Consensus 144 ~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~---------~~------~~~~--~ 206 (395)
+|+..+|++. + .+.++.+|+|++.||..|.++|++|.++.||++++|.++... .. |... .
T Consensus 164 ~ia~~lgl~g-p--~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rp 240 (428)
T 3mqd_A 164 TLATFFKIKG-I--NYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRA 240 (428)
T ss_dssp HHHHHTTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCT
T ss_pred HHHHHcCCCC-c--eeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCc
Confidence 9999999986 4 789999999999999999999999999999999999865310 00 0000 0
Q ss_pred hhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHH
Q 016094 207 LDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLL 285 (395)
Q Consensus 207 ~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 285 (395)
+.....++++||||+|+||++.+.. ..|..+..++.+.+.. .+|.++. .+ ......+++
T Consensus 241 fd~~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~--------------~dg~~~~-~P-----~~~~~~~ai 300 (428)
T 3mqd_A 241 YDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGAT--------------SDGYDMV-AP-----SGEGAIRCM 300 (428)
T ss_dssp TBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEE--------------ECCSCSS-SC-----CSHHHHHHH
T ss_pred ccCCCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEc--------------CCCCCCC-CC-----CHHHHHHHH
Confidence 1222357899999999999986421 0112234555544321 1111100 11 122355788
Q ss_pred HHhhcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhh
Q 016094 286 ADAMSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEER 359 (395)
Q Consensus 286 ~~~L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g 359 (395)
+++|+ |++ +|| ++.+|..+..+-+. +.+.++....++..+ ..-..+||+.+|+-.+.|..++... +++
T Consensus 301 ~~Al~--gl~--~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~-s~K~~~GH~~gAsG~~~~i~~~~~l-~~~ 374 (428)
T 3mqd_A 301 KMALS--TVT--SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIA-ATKSLTGHSLGATGVQEAIYSLLMM-QNN 374 (428)
T ss_dssp HHHHT--TCC--SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBC-CTHHHHCBCGGGHHHHHHHHHHHHH-HHT
T ss_pred HHHHh--CCc--cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceee-cchhhhcccHHHHHHHHHHHHHHHH-HhC
Confidence 89998 887 788 99999998876654 456666433322221 1355689999998766655443320 013
Q ss_pred cccC----------------------CCCCceEEEEEEcccceeeeeeEEec
Q 016094 360 KATT----------------------GEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 360 ~l~~----------------------G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
.+.| ..+..+++.-+||-|.+-++++|+.-
T Consensus 375 ~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 375 FICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp EECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CcCCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEeec
Confidence 2221 01125788899999999999998753
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=164.33 Aligned_cols=323 Identities=15% Similarity=0.111 Sum_probs=200.5
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
|.|+|+|...|.- .+.+++.+.+.. ..+. ..++. .| +..++..|... .-+ + ++. .. +..+..
T Consensus 4 v~ItG~g~~~p~g-~~~~~~w~~l~~-g~~~-i~~~~---~~--~~~~~~~~~~~-~v~-f--d~~----~~--~~~~~~ 65 (406)
T 2vba_A 4 AVITGLGIVSSIG-NNQQEVLASLRE-GRSG-ITFSQ---EL--KDSGMRSHVWG-NVK-L--DTT----GL--IDRKVV 65 (406)
T ss_dssp EEEEEEEEEBTTB-SSHHHHHHHHHH-TCCC-EEECH---HH--HHTTCSCCEEE-CCC-C--CCT----TS--SCHHHH
T ss_pred EEEEeeEEECCCC-CCHHHHHHHHHc-CCCe-EEeCC---cc--cccCCccceEE-Eec-C--Chh----hc--CCHHHH
Confidence 8999999999987 577777776531 1100 00000 11 11233333211 000 0 000 00 122222
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCE-----EEEEecCC-C---------------------------CCCCHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITH-----LIFGAVYG-V---------------------------DMPGADVR 144 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~-----li~~s~~~-~---------------------------~~p~~a~~ 144 (395)
........|+.+|+++||+++|+++++||. |++++..+ + ..+..+.+
T Consensus 66 ~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 145 (406)
T 2vba_A 66 RFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSAC 145 (406)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHH
Confidence 333457789999999999999999888875 88887654 2 01356789
Q ss_pred HHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cC-----CCCch--hh
Q 016094 145 LMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FH-----EPTEA--RL 207 (395)
Q Consensus 145 l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~-----~~~~~--~~ 207 (395)
|+..||++. + ++.++.+|+|++.||..|.++|++|.++.+|++++|..+.. +. +|... .+
T Consensus 146 is~~lgl~G-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pf 222 (406)
T 2vba_A 146 LATPFKIHG-V--NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTY 222 (406)
T ss_dssp HHTTTTCCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTT
T ss_pred HHHhccCCC-c--eeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHHHhhccccccccCCCCccccCcC
Confidence 999999986 4 78999999999999999999999999999999999986532 00 01110 01
Q ss_pred hhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHH
Q 016094 208 DMLVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLA 286 (395)
Q Consensus 208 ~~~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 286 (395)
.....++++||||+++||++.+... .|.....++.+.+... ++.+++ .+. .....++++
T Consensus 223 d~~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------dg~~~t-~p~-----~~~~~~ai~ 282 (406)
T 2vba_A 223 DAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATS--------------DGADMV-APS-----GEGAVRCMK 282 (406)
T ss_dssp BTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCTT-SCC-----SHHHHHHHH
T ss_pred cCCCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCC-CCC-----HHHHHHHHH
Confidence 1223578999999999999764310 0111234555433211 111000 011 234567899
Q ss_pred HhhcccCCCCCCce-EEEEcCCChHHHH-----HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhc
Q 016094 287 DAMSPIGISDWNSL-FYIVHPGGKVILD-----QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360 (395)
Q Consensus 287 ~~L~~~g~~~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~ 360 (395)
++|+++| +|| ++..|..+..+-+ .+.+.++...-.+-. +...+||+.+|+-.+.|..++... .++.
T Consensus 283 ~al~~ag----~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~v~s---~K~~~GH~~gAaG~~~~i~~~l~l-~~~~ 354 (406)
T 2vba_A 283 MAMHGVD----TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISA---TKAMTGHSLGAAGVQEAIYSLLML-EHGF 354 (406)
T ss_dssp HHHTTCC----SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEEC---THHHHCBCGGGHHHHHHHHHHHHH-HHTE
T ss_pred HHHhhCC----CCccEEEeeCccCcccCHHHHHHHHHHhCcCCCceeC---chhhhcccHHHHHHHHHHHHHHHH-hcCc
Confidence 9999998 578 9999999887644 455666643222222 355689999998877766555431 1133
Q ss_pred ccC---------C------------CCCceEEEEEEcccceeeeeeEEec
Q 016094 361 ATT---------G------------EGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 361 l~~---------G------------~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
+.| . .+..+++.-+||-|.+-..++|+..
T Consensus 355 ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 355 IAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp ECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred cCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEeC
Confidence 211 0 0115678889999999989998753
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=164.19 Aligned_cols=225 Identities=10% Similarity=0.064 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHHHcC----CCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCC-CccccceeeccccchHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWG----QPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLE-PSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~ag----i~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~-~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||+++| +++++||.|++++.++ +..|..+.+++..||++ ..+ +++++.+|+|++.||..|.
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p--~~~v~~aCasg~~Al~~A~ 112 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTP--FVALNRQCSSGLTAVNDIA 112 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC--EEEEECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCce--EEEEcCcCHHHHHHHHHHH
Confidence 88999999999999999 9999999999998877 55567899999999995 344 7899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccccc-ccC--------------CCCch------------------------------------
Q 016094 177 DIAENNPGARVLVVCCDITVL-HFH--------------EPTEA------------------------------------ 205 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~-~~~--------------~~~~~------------------------------------ 205 (395)
++|++|.++.||++++|.++. .+. ...+.
T Consensus 113 ~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~ 192 (393)
T 1afw_A 113 NKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAY 192 (393)
T ss_dssp HHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH
Confidence 999999999999999997653 110 00000
Q ss_pred ---------------------------h-h-----h----hh--h--h-hhh-------hccccEEEEEecCCCCC-CCC
Q 016094 206 ---------------------------R-L-----D----ML--V--G-QAI-------FGDGAAAAIIGADPDVS-LNE 235 (395)
Q Consensus 206 ---------------------------~-~-----~----~~--~--~-~~l-------~GDGAaA~vL~~~~~~~-~~~ 235 (395)
. + + .+ + . +++ ++|||+|+||++.+... .|.
T Consensus 193 ~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~ 272 (393)
T 1afw_A 193 KAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNL 272 (393)
T ss_dssp HHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTC
T ss_pred hhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCCCCeechhcCcccchhheeeEecHHHHHHcCC
Confidence 0 0 0 00 0 0 223 69999999998765320 112
Q ss_pred CCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH
Q 016094 236 RPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ 314 (395)
Q Consensus 236 ~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~ 314 (395)
.+..++.+.+.... .++.. ......+++++|+++|+++ +|| ++-.|-.....--.
T Consensus 273 ~~~a~i~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ve~h~~ft~~~l~ 328 (393)
T 1afw_A 273 PVLGRYIDFQTVGV--------------------PPEIM---GVGPAYAIPKVLEATGLQV-QDIDIFEINEAFAAQALY 328 (393)
T ss_dssp CCCEEEEEEEEEEC--------------------CGGGG---GGHHHHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHH
T ss_pred CccEEEEEEEEecc--------------------Chhhc---chhHHHHHHHHHHHcCCCH-HHCCEEEEeccCHHHHHH
Confidence 23345555432210 01111 1123468899999999997 999 99999887655444
Q ss_pred HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 315 VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 315 i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
..+.||++++++..+ --..-+||...|+-...+.+++.+
T Consensus 329 ~~~~lg~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~ 367 (393)
T 1afw_A 329 CIHKLGIDLNKVNPR-GGAIALGHPLGCTGARQVATILRE 367 (393)
T ss_dssp HHHHHTCCGGGBSTT-CCHHHHCBCTTTHHHHHHHHHHHH
T ss_pred HHHHhCCCCcCcCCC-CChhhcCCchhhHHHHHHHHHHHH
Confidence 567899988776542 123359999998888888887776
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=163.02 Aligned_cols=253 Identities=13% Similarity=0.061 Sum_probs=174.7
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEW-GQPVSKITHLIFGAVYG-VD-MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~a-gi~~~~Id~li~~s~~~-~~-~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++ |+++++||.+++++.++ +. .+..+.+++..||++...+ .+.++.+|+|++.||..|.++|
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p-~~~v~~aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSA-AQTVSRLCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSE-EEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCcc-EEEEcccchhHHHHHHHHHHHH
Confidence 7899999999999999 99999999999998876 33 4788999999999954333 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc-cc-----CCCC-------------c----------hhhh----------------------
Q 016094 180 ENNPGARVLVVCCDITVL-HF-----HEPT-------------E----------ARLD---------------------- 208 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~-~~-----~~~~-------------~----------~~~~---------------------- 208 (395)
++|.++.||++++|.++. .+ .++. . .+++
T Consensus 109 ~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~ 188 (390)
T 1wdk_C 109 MTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKF 188 (390)
T ss_dssp HTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999998753 11 0100 0 0000
Q ss_pred ---------------------h--------------------hhhhhh-------hccccEEEEEecCCCCC-CCCCCce
Q 016094 209 ---------------------M--------------------LVGQAI-------FGDGAAAAIIGADPDVS-LNERPLF 239 (395)
Q Consensus 209 ---------------------~--------------------~~~~~l-------~GDGAaA~vL~~~~~~~-~~~~~~~ 239 (395)
+ ...+++ +||||+|+||++.+... .+..+..
T Consensus 189 ~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a 268 (390)
T 1wdk_C 189 KDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLA 268 (390)
T ss_dssp TTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSE
T ss_pred ccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccE
Confidence 0 013447 99999999999764310 1112334
Q ss_pred EEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHH
Q 016094 240 QVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQN 318 (395)
Q Consensus 240 ~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~ 318 (395)
.+.+.+.... .+... ......+++++|+++|+++ +|| ++-+|-........+.+.
T Consensus 269 ~I~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ve~~d~f~~~~~~~~~~ 324 (390)
T 1wdk_C 269 VIRSMAVAGV--------------------DPAIM---GYGPVPATQKALKRAGLNM-ADIDFIELNEAFAAQALPVLKD 324 (390)
T ss_dssp EEEEEEEEEC--------------------CGGGG---GGTHHHHHHHHHHHHTCCG-GGCCEEEECCSBHHHHHHHHHH
T ss_pred EEEEEEEecc--------------------Chhhc---chhHHHHHHHHHHHcCCCh-hhCcEEEeccCCHHHHHHHHHH
Confidence 5655432210 01110 1223468899999999997 999 999998887666777899
Q ss_pred cCCC---cccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 319 LGLG---KEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 319 lgi~---~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
||++ .+++..+ -....+||+.+++-...+.+++.+.. + +.+ .+.|....+.|....+++|+.
T Consensus 325 lg~~~~~~~~vn~~-gg~~~~GHp~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 325 LKVLDKMNEKVNLH-GGAIALGHPFGCSGARISGTLLNVMK--Q--NGG---TFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp TTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--TTC---SEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCCCCCCcCCCC-cCcccccCCcchhHHHHHHHHHHHHh--h--cCC---CEEEEEecccchheEEEEEEe
Confidence 9997 4454431 13567899999986666655555411 1 123 555555444444566777764
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=166.60 Aligned_cols=254 Identities=11% Similarity=0.074 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCC-CccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-V-DMPGADVRLMNLLGLE-PSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~-~~p~~a~~l~~~LGl~-~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+|+.+|+++||+++|+++++||.|++++.++ + ..+..+.+++..||++ ..+ +++++.+|+|++.||..|.++|
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p--~~~v~~aCaSg~~Al~~A~~~I 132 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVA--VRTVNRQCSSGLQAVADVAAAI 132 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSC--EEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCce--EEEeCCcCHHHHHHHHHHHHHH
Confidence 789999999999999999999999999998766 2 2356788999999996 344 7899999999999999999999
Q ss_pred HcCCCCeEEEEEecccccc-cC------C-----CCc-----------------------------------------h-
Q 016094 180 ENNPGARVLVVCCDITVLH-FH------E-----PTE-----------------------------------------A- 205 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~~-~~------~-----~~~-----------------------------------------~- 205 (395)
++|.++.||++++|.++.. +. + ..+ .
T Consensus 133 ~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag 212 (442)
T 2wu9_A 133 KAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAG 212 (442)
T ss_dssp HTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcc
Confidence 9999999999999987641 10 0 000 0
Q ss_pred hhhh----------------------------------------h--h--hhhh-------hccccEEEEEecCCCCC-C
Q 016094 206 RLDM----------------------------------------L--V--GQAI-------FGDGAAAAIIGADPDVS-L 233 (395)
Q Consensus 206 ~~~~----------------------------------------~--~--~~~l-------~GDGAaA~vL~~~~~~~-~ 233 (395)
.++. + + .+++ ++|||+|+||++.+... .
T Consensus 213 ~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~ 292 (442)
T 2wu9_A 213 KFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQK 292 (442)
T ss_dssp TTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHH
T ss_pred cccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHc
Confidence 0000 0 0 0122 59999999998765320 1
Q ss_pred CCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHH
Q 016094 234 NERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVIL 312 (395)
Q Consensus 234 ~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~ 312 (395)
|.++...+.+.+.... .+..+ ......+++++|+++|+++ +|| +|=.|-.....-
T Consensus 293 g~~~~a~I~g~~~~~~--------------------~p~~~---~~~~~~A~~~Al~~AGl~~-~DId~iE~h~aft~~~ 348 (442)
T 2wu9_A 293 GLPVLGVFRTFAAVGV--------------------DPAIM---GIGPAVAIPAAVKAAGLEL-DDIDLFEINEAFASQF 348 (442)
T ss_dssp TCCCCEEEEEEEEEEC--------------------CGGGG---GGHHHHHHHHHHHHTTCCG-GGCCEEEECCSBHHHH
T ss_pred CCCceEEEEEEEEecC--------------------Cchhc---chHHHHHHHHHHHHcCCCH-HHCCEEEEeCCChHHH
Confidence 1223345555432110 01111 1123468899999999997 999 999999877654
Q ss_pred HHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEE-EEEEcccceeeeeeEEec
Q 016094 313 DQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGV-LFGFGPGITVETVVLRSI 389 (395)
Q Consensus 313 ~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vl-l~~~G~G~~~~a~llr~~ 389 (395)
-...+.||++++++..+ --..-+||...|+-...+.+++.+.. ++-..+ .+.| -..+| |....+++|+..
T Consensus 349 l~~~~~lG~~~~~vN~~-GG~~a~GHp~GAsG~~~~~~~v~~Lr--~~~~~~---~~glas~~~G-GG~~~a~v~~~~ 419 (442)
T 2wu9_A 349 VYCRNKLGLDPEKINVN-GGAMAIGHPLGATGARCVATLLHEMK--RRGKDC---RFGVVSMCIG-TGMGAAAVFERG 419 (442)
T ss_dssp HHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--HHCTTC---CEEEEEEEET-TTEEEEEEEEEC
T ss_pred HHHHHHhCCCCCCcCCC-ccHhhcCCchhHHHHHHHHHHHHHHh--ccCCCC---CEEEEEeecc-cchheEEEEEec
Confidence 45567899988776542 12335999988776666666655421 111113 5555 35577 445567777653
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-16 Score=156.78 Aligned_cols=327 Identities=14% Similarity=0.111 Sum_probs=198.9
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
|.|+|+|...|.- .+.+++.+.+.. .. +...++. +|-.+..++..|.-. .-+ .++. . . +..+..
T Consensus 14 vaI~G~g~~~p~g-~~~~~~w~~l~~-g~-~~i~~~~---~~~~~~~~~~~~~~~-~~~---~d~~--~--~--~~~~~~ 77 (416)
T 2wge_A 14 VVVTAVTATTSIS-PDIESTWKGLLA-GE-SGIHALE---DEFVTKWDLAVKIGG-HLK---DPVD--S--H--MGRLDM 77 (416)
T ss_dssp EEEEEEEEEESSC-SSHHHHHHHHHT-TC-CCCEECC---CHHHHHHTCSCCEEB-CCS---SCGG--G--G--CCHHHH
T ss_pred EEEEeeEEECCCC-CCHHHHHHHHHc-CC-CEEEeCC---ccccccccCCccEEE-EeC---Cchh--h--h--CCHHHH
Confidence 9999999999997 577777777631 10 0000000 010001122222111 000 0000 0 0 223344
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-----------------CCC---------CHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V-----------------DMP---------GADVRLM 146 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~-----------------~~p---------~~a~~l~ 146 (395)
........|+.+|+++||+++|+ +++| .|+++++++ + ..| ..+.+|+
T Consensus 78 ~~~d~~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia 155 (416)
T 2wge_A 78 RRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIG 155 (416)
T ss_dssp HHSCHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHH
Confidence 45556788999999999999998 4555 377777654 3 112 4678999
Q ss_pred HHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCC-----CCch--hhhh
Q 016094 147 NLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHE-----PTEA--RLDM 209 (395)
Q Consensus 147 ~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~-----~~~~--~~~~ 209 (395)
..||++. + .+.+..+|+|++.||..|.++|++|.++.||++++|..+.. +.. |... .+..
T Consensus 156 ~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~ 232 (416)
T 2wge_A 156 LQLGARA-G--VMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDK 232 (416)
T ss_dssp HHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBT
T ss_pred HHhccCC-C--cccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCccccccccc
Confidence 9999985 3 78999999999999999999999999999999999986532 011 1100 0111
Q ss_pred hhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHh
Q 016094 210 LVGQAIFGDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADA 288 (395)
Q Consensus 210 ~~~~~l~GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 288 (395)
...+++|||||+|+||++.+... .|......+.+.+... ++.++. .+. .......++++++
T Consensus 233 ~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~--------------dg~~~~-~p~---~~~~~~~~ai~~a 294 (416)
T 2wge_A 233 DRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITS--------------DAFHMV-APA---ADGVRAGRAMTRS 294 (416)
T ss_dssp TCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEE--------------CCSCSS-SCC---TTCHHHHHHHHHH
T ss_pred CCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEec--------------CCCCcc-CCC---CChHHHHHHHHHH
Confidence 23578999999999998754210 0111234555432211 111000 011 0123456789999
Q ss_pred hcccCCCCCCce-EEEEcCCChHHHHHHH----HHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC
Q 016094 289 MSPIGISDWNSL-FYIVHPGGKVILDQVE----QNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT 363 (395)
Q Consensus 289 L~~~g~~~~~di-~~i~H~~~~~~~~~i~----~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~ 363 (395)
|+++|+++ +|| ++.+|..+..+-+.++ +.++.. ++..+ .....+||+.+|+-.+.|...+... .++.+.|
T Consensus 295 l~~agl~~-~dId~ve~HgtgT~~gD~~E~~al~~~~~~--~~~v~-s~k~~~GH~~gAsG~~~~i~~~l~l-~~~~ipp 369 (416)
T 2wge_A 295 LELAGLSP-ADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAVY-APKSALGHSIGAVGALESVLTVLTL-RDGVIPP 369 (416)
T ss_dssp HHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHTTCT--TSEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HHTEECC
T ss_pred HHHcCCCH-HHCCEEEECCCCCcCCCHHHHHHHHHhccC--CCCcc-CCcccccCcHHHHHHHHHHHHHHHH-hcCCcCC
Confidence 99999997 999 9999998887655442 334432 22221 1466889999998877665554321 1133221
Q ss_pred C---------------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 364 G---------------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 364 G---------------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
- .+..+++.-+||-|.+-.+++|+.
T Consensus 370 ~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 370 TLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp CTTCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 0 012578888999999988888863
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-16 Score=170.15 Aligned_cols=274 Identities=15% Similarity=0.142 Sum_probs=182.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC-CCC-------------------CCHHHHHHHH
Q 016094 93 DARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITH----LIFGAVYG-VDM-------------------PGADVRLMNL 148 (395)
Q Consensus 93 ~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~----li~~s~~~-~~~-------------------p~~a~~l~~~ 148 (395)
..+..........|+.+|+.+||+++|+++++||. |++++.+. +.. ...+.+|+..
T Consensus 106 ~~~ea~~mdp~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~ 185 (917)
T 2hg4_A 106 SPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYC 185 (917)
T ss_dssp CHHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHH
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHh
Confidence 33444455567889999999999999999999984 78777765 321 1357899999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----c-----CCCCch--hhhhhhhhhhh
Q 016094 149 LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----F-----HEPTEA--RLDMLVGQAIF 216 (395)
Q Consensus 149 LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----~-----~~~~~~--~~~~~~~~~l~ 216 (395)
||+++ + ++.++.+|+|++.||..|.+.|++|.++.+|++++|.++.. | ..++.. .+.....++++
T Consensus 186 lgl~G-p--s~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~~ 262 (917)
T 2hg4_A 186 LGLEG-P--AMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGL 262 (917)
T ss_dssp HTCCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBCB
T ss_pred cCCCC-C--eEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCCC
Confidence 99987 4 78999999999999999999999999999999999987531 1 011100 01223357899
Q ss_pred ccccEEEEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCC
Q 016094 217 GDGAAAAIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGIS 295 (395)
Q Consensus 217 GDGAaA~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~ 295 (395)
||||+|+||++.+... .|......+.+.+... +|... +...+ ......++++++|+++|++
T Consensus 263 gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~--------------dg~~~--~~~~P--~~~~q~~ai~~Al~~Agl~ 324 (917)
T 2hg4_A 263 AEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQ--------------DGASN--GLTAP--SGPAQQRVIRRALENAGVR 324 (917)
T ss_dssp BCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCS--SSSCC--CHHHHHHHHHHHHHHHTCC
T ss_pred cceEEEEEEeeHHHHHhCCCCeEEEEEEEEEec--------------CCCcc--CCCCC--CHHHHHHHHHHHHHHcCCC
Confidence 9999999998754210 0111234454433211 11000 00011 1334567899999999999
Q ss_pred CCCce-EEEEcCCChHHHH-----HHHHHcCCCc---ccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC---
Q 016094 296 DWNSL-FYIVHPGGKVILD-----QVEQNLGLGK---EKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT--- 363 (395)
Q Consensus 296 ~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~---ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~--- 363 (395)
+ +|| ++..|..+..+-+ .+.+.+|... ..+..+ .....+||+.+|+-+..|..++... +++.+.|
T Consensus 325 p-~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vg-s~K~~iGH~~~AaG~~~lik~vl~L-~~~~ipp~~~ 401 (917)
T 2hg4_A 325 A-GDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIG-SVKSNIGHTQAAAGVAGVMKAVLAL-RHGEMPRTLH 401 (917)
T ss_dssp G-GGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEE-CTHHHHCBCGGGTTHHHHHHHHHHH-HHTEECCCTT
T ss_pred H-HHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceecc-CcccceecchhhhHHHHHHHHHHHH-hcCCcCCCCC
Confidence 7 999 9999999876544 4556666532 122211 1467899999888777766555431 1132210
Q ss_pred --------------------------CCCCceEEEEEEcccceeeeeeEEecc
Q 016094 364 --------------------------GEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 364 --------------------------G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
+.+..++++-+||.|.+-+.++|+-.+
T Consensus 402 ~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 402 FDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp CCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 001157888999999999999998653
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-16 Score=168.76 Aligned_cols=269 Identities=14% Similarity=0.126 Sum_probs=182.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-CCC-------------C-----CHHHHHHHHcCCCCc
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-VDM-------------P-----GADVRLMNLLGLEPS 154 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~~~-------------p-----~~a~~l~~~LGl~~~ 154 (395)
...+....|+.+|+++||+++|+++++|| +|++++.++ +.. + ..+.+|+..||+++
T Consensus 90 ~~mdp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G- 168 (915)
T 2qo3_A 90 AAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEG- 168 (915)
T ss_dssp HTSCHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBCS-
T ss_pred HhCCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCCC-
Confidence 34455778999999999999999999999 488887765 321 1 36789999999987
Q ss_pred cccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCCCCch--hhhhhhhhhhhccccEE
Q 016094 155 VNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHEPTEA--RLDMLVGQAIFGDGAAA 222 (395)
Q Consensus 155 ~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~~~~~--~~~~~~~~~l~GDGAaA 222 (395)
+ ++.++.+|+|++.||..|.++|++|.++.+|++++|.++.. ...+... .+.....++++||||+|
T Consensus 169 p--s~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gEGaga 246 (915)
T 2qo3_A 169 P--SISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSEGVTL 246 (915)
T ss_dssp C--EEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBCEEEE
T ss_pred C--EEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecCceEE
Confidence 4 78999999999999999999999999999999999986531 1111100 11223357899999999
Q ss_pred EEEecCCCCC-CCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-
Q 016094 223 AIIGADPDVS-LNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL- 300 (395)
Q Consensus 223 ~vL~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di- 300 (395)
+||++.+... .|......+.+.+... +|... +...+. .....++++++|+++|+++ +||
T Consensus 247 vVL~~~~~A~~~g~~i~a~I~G~~~~~--------------dg~~~--~~~~p~--~~~~~~~i~~Al~~Agl~p-~dId 307 (915)
T 2qo3_A 247 VLLERLSEARRNGHEVLAVVRGSALNQ--------------DGASN--GLSAPS--GPAQRRVIRQALESCGLEP-GDVD 307 (915)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCS--STTCCC--HHHHHHHHHHHHHHTTCCG-GGCC
T ss_pred EEEeEhHHhhhCCCCeEEEEEEEEEec--------------CCCcc--CCCCCC--HHHHHHHHHHHHHHcCCCH-HHCc
Confidence 9998754210 0111233454433211 11100 001111 3355688999999999997 999
Q ss_pred EEEEcCCChHHHH-----HHHHHcCCCc---ccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC---------
Q 016094 301 FYIVHPGGKVILD-----QVEQNLGLGK---EKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT--------- 363 (395)
Q Consensus 301 ~~i~H~~~~~~~~-----~i~~~lgi~~---ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~--------- 363 (395)
++.+|..+..+-+ .+.+.++... ..+..+ .....+||+.+|+-+..|..++... +++.+.+
T Consensus 308 ~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vg-s~K~~iGH~~~AaG~~~lik~~l~L-~~~~ipp~~~~~~~~p 385 (915)
T 2qo3_A 308 AVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLG-SVKSNIGHTQAAAGVTGLLKVVLAL-RNGELPATLHVEEPTP 385 (915)
T ss_dssp EEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEE-CTHHHHCBCGGGHHHHHHHHHHHHH-HHTEECCCSSCSSBCT
T ss_pred EEEecCCCCccCCHHHHHHHHHHhccccCCCCccccc-CcccceeCCccccchHHHHHHHHHH-hcCCCCCCCCCCCCCc
Confidence 9999998765533 4567777643 223221 1467899999998887776655431 1133321
Q ss_pred --------------------CCCCceEEEEEEcccceeeeeeEEecc
Q 016094 364 --------------------GEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 364 --------------------G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
+.+..++++-+||.|.+-+.++|+-.+
T Consensus 386 ~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 386 HVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp TSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred ccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 111257889999999999999998653
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-15 Score=162.20 Aligned_cols=273 Identities=15% Similarity=0.156 Sum_probs=183.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------CCCCHHHHHHH
Q 016094 92 LDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V-------------------DMPGADVRLMN 147 (395)
Q Consensus 92 ~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~-------------------~~p~~a~~l~~ 147 (395)
+..|..........|+.+++.+||+++|+++++|| ++++++.+. + ..+..+.+|+.
T Consensus 69 i~~~ea~~mDp~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~ 148 (965)
T 3hhd_A 69 VHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSF 148 (965)
T ss_dssp CCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHH
T ss_pred CCHHHHhhcCHHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHH
Confidence 33444444556778999999999999999999999 788887654 2 23356889999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCCCCch--hhhhhhhhhh
Q 016094 148 LLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHEPTEA--RLDMLVGQAI 215 (395)
Q Consensus 148 ~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~~~~~--~~~~~~~~~l 215 (395)
.||+++ + ++.++.+|+|++.||.+|.+.|++|.++.+|++++|.++.. +..|... .+.....+++
T Consensus 149 ~lgl~G-P--s~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~ 225 (965)
T 3hhd_A 149 FFDFRG-P--SIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYC 225 (965)
T ss_dssp HHTCCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBC
T ss_pred HhCCCC-C--eeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCcc
Confidence 999987 3 78999999999999999999999999999999999987521 1111111 1222335789
Q ss_pred hccccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCC
Q 016094 216 FGDGAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGIS 295 (395)
Q Consensus 216 ~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~ 295 (395)
+||||+++||++.+... +....+.+.+... +|... .+-..+. .....++++++|+++|++
T Consensus 226 ~gEGagavvL~~l~~A~---~i~a~I~g~~~n~--------------dg~~~-~~~t~P~--~~~q~~~i~~Al~~Agl~ 285 (965)
T 3hhd_A 226 RSEGVVAVLLTKKSLAR---RVYATILNAGTNT--------------DGFKE-QGVTFPS--GDIQEQLIRSLYQSAGVA 285 (965)
T ss_dssp BBCEEEEEEEEEGGGCS---SCSEEEEEEEEEE--------------CCCCT-TCTTSCC--HHHHHHHHHHHHHHTTCC
T ss_pred ccceEEEEEEecHHHcC---cccEEEEeeeccC--------------CCCCC-CCCcCCC--HHHHHHHHHHHHHHhCCC
Confidence 99999999999866431 1234455433211 11000 0001111 223457899999999999
Q ss_pred CCCce-EEEEcCCChHHHH-----HHHHHcCCCcc-cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCC--
Q 016094 296 DWNSL-FYIVHPGGKVILD-----QVEQNLGLGKE-KLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEG-- 366 (395)
Q Consensus 296 ~~~di-~~i~H~~~~~~~~-----~i~~~lgi~~e-k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~-- 366 (395)
+ +|| ++-.|-.+..+-| .+.+.++-..+ .++.. .+-..+||+.+|+-...|-..+.. .+++.+.|--+
T Consensus 286 p-~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~vg-s~Ks~iGH~~~AaG~~~lik~~l~-l~~~~ipp~~~~~ 362 (965)
T 3hhd_A 286 P-ESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIG-STKSNMGHPEPASGLAALAKVLLS-LEHGLWAPNLHFH 362 (965)
T ss_dssp G-GGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCCSSCC
T ss_pred H-HHhccccccCCCCCCCCHHHHHHHHHHhcccCCCceeee-ccccccccchhhhhHHHHHHHHHH-HhcCCcCCccCCC
Confidence 7 999 9999988876544 45566653322 22221 145678999999877766554432 11133321000
Q ss_pred ------------------------CceEEEEEEcccceeeeeeEEecc
Q 016094 367 ------------------------LEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 367 ------------------------~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
..++++-+||.|.+-+.++|+-.+
T Consensus 363 ~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 363 SPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp SBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccCC
Confidence 035788999999999999998643
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.43 E-value=7.3e-13 Score=134.35 Aligned_cols=259 Identities=14% Similarity=0.078 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-------------CCCCCHHHHHHHHcCCCCccccceeeccccchHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-------------VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGG 169 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-------------~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~ 169 (395)
+.+|+.+|++.||+++|+++++||.+|.+.... ...+..+..++..||+++.+ +..+..+|+|+.
T Consensus 42 ~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~~~~--~~~~~~~caSg~ 119 (520)
T 4egv_A 42 SVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGADPAH--AVLEVIGGQSPQ 119 (520)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCCCSE--EEECCSSTTHHH
T ss_pred HHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCCCce--EEEecCCCHHHH
Confidence 889999999999999999999988766443321 12346778899999999766 778899999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEecccccc-c-CC----C-----------C-------------ch--------------
Q 016094 170 AVIRHAKDIAENNPGARVLVVCCDITVLH-F-HE----P-----------T-------------EA-------------- 205 (395)
Q Consensus 170 ~al~~A~~ll~~g~~~~vLvv~~e~~s~~-~-~~----~-----------~-------------~~-------------- 205 (395)
.++..|.+.|++|.++.||++++|.+|.. + .. + . ..
T Consensus 120 ~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~ 199 (520)
T 4egv_A 120 HLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGLLE 199 (520)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHHHHHHHHH
Confidence 99999999999999999999999998631 0 00 0 0 00
Q ss_pred -----------------------------------------hhh-----------------hhhhhhhhccccEEEEEec
Q 016094 206 -----------------------------------------RLD-----------------MLVGQAIFGDGAAAAIIGA 227 (395)
Q Consensus 206 -----------------------------------------~~~-----------------~~~~~~l~GDGAaA~vL~~ 227 (395)
+.+ ...+....+|||+|+||.+
T Consensus 200 s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S 279 (520)
T 4egv_A 200 NARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMS 279 (520)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEE
T ss_pred HHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEee
Confidence 000 0012334689999999987
Q ss_pred CCCCC-CCCCCceEEEeecce-ecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEE
Q 016094 228 DPDVS-LNERPLFQVLSCSQM-TVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIV 304 (395)
Q Consensus 228 ~~~~~-~~~~~~~~l~~~~~~-~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~ 304 (395)
.+... .|..+...+...+.. ..|.. + + ..+++. .......+++++|+++|+++ +|| +|=+
T Consensus 280 ~e~A~~lGl~p~a~I~~~a~a~~~~~~---~-~----------~~~~~~--~~~~~~~a~~~al~~agl~~-~did~~E~ 342 (520)
T 4egv_A 280 VESARKLGVPEEKWVYLRGHADMKEPK---L-L----------ERADIG--ASPASVTAVNEALRVAGIGL-DDVAAFDL 342 (520)
T ss_dssp HHHHHHHTCCGGGCEEEEEEEEEECCC---G-G----------GCSCTT--CCHHHHHHHHHHHHHHTCCG-GGEEEEEE
T ss_pred HHHHHHcCCCCceEEEEEEEeccCCcc---c-c----------cccccc--cChHHHHHHHHHHHHhCCCH-HHCCEEEE
Confidence 65321 111122223222111 01110 0 0 001100 01123467889999999997 999 8999
Q ss_pred cCCChHHHHHHHHHcCCCcc---cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEccccee
Q 016094 305 HPGGKVILDQVEQNLGLGKE---KLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITV 381 (395)
Q Consensus 305 H~~~~~~~~~i~~~lgi~~e---k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~ 381 (395)
|-......-.+.+.||++.+ ++..+ --+..+||..+++-...+.++..+.. + ..| .+-|..+-| |+-|
T Consensus 343 ~dAF~~~~l~~~~~lG~~~~~~~~~n~~-Gg~~~~Ghp~~a~g~~~~~~~v~~lr--~--~~~---~~~L~~~~g-g~~~ 413 (520)
T 4egv_A 343 YSCFPFPVFNICDGTGLATDDPRGLTLT-GGLPFFGGLGNNYSMHGIAEAVNEMR--D--KPG---QFALVGANG-GIAS 413 (520)
T ss_dssp CCSSSHHHHHHHHHHCCCTTCTTCSCSS-CCHHHHCSCSSSHHHHHHHHHHHHHH--H--STT---CEEEEEEEE-TTTT
T ss_pred eCCcHHHHHHHHHHhCCCCCCCCCcCCC-cccccCCChHHHHHHHHHHHHHHHHh--c--CCC---CceEEeCCC-Ceee
Confidence 98777777778899999643 34321 12456899999988888888777621 1 234 666665544 5655
Q ss_pred eeeeEEec
Q 016094 382 ETVVLRSI 389 (395)
Q Consensus 382 ~a~llr~~ 389 (395)
....+.+.
T Consensus 414 ~~~~~~l~ 421 (520)
T 4egv_A 414 KYSVGIYS 421 (520)
T ss_dssp EEEEEEEE
T ss_pred eeeEEEEc
Confidence 55555554
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=9.6e-13 Score=154.32 Aligned_cols=282 Identities=12% Similarity=0.085 Sum_probs=176.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC--------EEEEEecCC-C-----------------------CC-
Q 016094 92 LDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKIT--------HLIFGAVYG-V-----------------------DM- 138 (395)
Q Consensus 92 ~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id--------~li~~s~~~-~-----------------------~~- 138 (395)
+..|..........|+.+|+.+||+++|+++++|+ ++++++..+ . ..
T Consensus 2636 Is~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2715 (3089)
T 3zen_D 2636 ISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLP 2715 (3089)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTST
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccc
Confidence 45555566667889999999999999999998885 677776532 0 11
Q ss_pred CCHHHHHHH-HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----c--------------
Q 016094 139 PGADVRLMN-LLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----F-------------- 199 (395)
Q Consensus 139 p~~a~~l~~-~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----~-------------- 199 (395)
...+.+++. .+|+.. + ++.++.+|+|++.||.+|.++|++|.++.+|++|+|.++.. |
T Consensus 2716 ~~~aa~is~~~lGl~G-P--s~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~ 2792 (3089)
T 3zen_D 2716 NVVAAHVMQSYVGGYG-A--MVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRA 2792 (3089)
T ss_dssp THHHHHHHHHTTCCCS-C--EECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHH
T ss_pred cHHHHHHHHHHcCCCC-C--ceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHHHHhhhhhcchhhhh
Confidence 234566665 569976 3 78999999999999999999999999999999999986521 0
Q ss_pred --CCCCch--hhhhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcch
Q 016094 200 --HEPTEA--RLDMLVGQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLP 274 (395)
Q Consensus 200 --~~~~~~--~~~~~~~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~ 274 (395)
.+|... .+.....++++||||+++||++.+.. ..|......+.+.+....+.... +... +...+
T Consensus 2793 ~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~-----~~aP------~~g~~ 2861 (3089)
T 3zen_D 2793 KGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTS-----IPAP------GLGAL 2861 (3089)
T ss_dssp TTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCC-----SSCC------CCGGG
T ss_pred ccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccC-----ccCC------chhHH
Confidence 001110 01122357899999999999985421 00111222222221111110000 0000 11111
Q ss_pred HHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHH--------HHHHHcCCCc-ccchHHHHHHHhcCCCCcchH
Q 016094 275 VIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILD--------QVEQNLGLGK-EKLGASRYALSEYGNLGAPSV 344 (395)
Q Consensus 275 ~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~--------~i~~~lgi~~-ek~~~~~~~~~~~Gn~~sasi 344 (395)
..+...-.++++++|+++|+++ +|| ++.+|-.+..+-+ .+.+.+|... .++..+ ..-..+||+.+|+-
T Consensus 2862 ~a~~~~q~~ai~~AL~~AGl~p-~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~-s~Ks~iGH~~gAAG 2939 (3089)
T 3zen_D 2862 GAARGGRESTLARSLAQLGVGA-DDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIV-SQKTLTGHAKGGAA 2939 (3089)
T ss_dssp GGSTTGGGSHHHHHHHTTTCCG-GGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEE-CSHHHHCBCSTTHH
T ss_pred hHhhhhHHHHHHHHHHHcCCCH-HHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceec-ccccccCCchhhhh
Confidence 1111122367889999999997 999 9999998876543 4556778664 333221 14567899999986
Q ss_pred HHHHHHHHhhhhhhhcccC----------------------------CCCCceEEEEEEcccceeeeeeEEecc
Q 016094 345 LFILDDVRKKSTEERKATT----------------------------GEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 345 ~~~L~~~~~~~~~~g~l~~----------------------------G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
...|..++.. ..++.+.+ ..+..++++-+||.|.+-+.++|+-.+
T Consensus 2940 ~~~lik~ll~-L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~ 3012 (3089)
T 3zen_D 2940 VFQMMGLCQI-LRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPE 3012 (3089)
T ss_dssp HHHHHHHHHH-HHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGG
T ss_pred HHHHHHHHHH-HhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCc
Confidence 6555444332 01133221 000146888999999998888887643
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3e-10 Score=133.53 Aligned_cols=269 Identities=14% Similarity=0.110 Sum_probs=179.9
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C--------------C----CC-CHHHHHHHHcC
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V--------------D----MP-GADVRLMNLLG 150 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~--------------~----~p-~~a~~l~~~LG 150 (395)
+..........|+.+++.+||+++|+++++++ +|++++++. + . .+ ..+.+|+..+|
T Consensus 70 ~ea~~~dpq~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~ 149 (2512)
T 2vz8_A 70 KQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFD 149 (2512)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHT
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhC
Confidence 33334445677999999999999999876654 666666542 1 0 11 25789999999
Q ss_pred CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccccc----------ccCCCCch--hhhhhhhhhhhcc
Q 016094 151 LEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVL----------HFHEPTEA--RLDMLVGQAIFGD 218 (395)
Q Consensus 151 l~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~----------~~~~~~~~--~~~~~~~~~l~GD 218 (395)
+++. ++.+..+|+|++.||++|.+.|++|.++.+|+.|++.... .+..|+.. .++....+++.|+
T Consensus 150 l~Gp---s~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~adG~~~gE 226 (2512)
T 2vz8_A 150 FKGP---SITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAE 226 (2512)
T ss_dssp CCSC---EEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTCCCBCBBC
T ss_pred CCCC---ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCCCCcceee
Confidence 9986 6889999999999999999999999999999999997532 11122211 1122336799999
Q ss_pred ccEEEEEecCCCCCCCCCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCC
Q 016094 219 GAAAAIIGADPDVSLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWN 298 (395)
Q Consensus 219 GAaA~vL~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~ 298 (395)
|++++||++..... +....+.+.+.. .+|.+. .+-..|. .....++|+++|+++|+++ +
T Consensus 227 G~~~~vLk~l~~A~---~i~a~i~g~~~n--------------~dg~~~-~~~t~P~--~~~q~~~i~~al~~ag~~p-~ 285 (2512)
T 2vz8_A 227 AVVAVLLTKKSLAR---RVYATILNAGTN--------------TDGSKE-QGVTFPS--GDVQEQLIRSLYAPAGPDP-E 285 (2512)
T ss_dssp EEEEEEEEEGGGCS---CCSEEEEEEEEE--------------ECCCCT-TCSSSCC--HHHHHHHHHTTSGGGSSCT-T
T ss_pred eEEEEEEEEHHHCC---cccEEEEEEEEc--------------CCCCCC-CCCCCCC--HHHHHHHHHHHHHHcCCCH-H
Confidence 99999999876531 123445543321 111100 0001111 2345678999999999997 9
Q ss_pred ce-EEEEcCCChHHHH-----HHHHHcCCCcc-cchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC--------
Q 016094 299 SL-FYIVHPGGKVILD-----QVEQNLGLGKE-KLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT-------- 363 (395)
Q Consensus 299 di-~~i~H~~~~~~~~-----~i~~~lgi~~e-k~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~-------- 363 (395)
+| |+-.|..+..+-| .+.+.+|-... .++.+ .+-..+||+-+|+-...|-..+-. .++|.+.|
T Consensus 286 ~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~ig-S~Ks~iGH~~~AaG~~~~ik~~l~-l~~~~ipp~~~~~~~~ 363 (2512)
T 2vz8_A 286 SLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIG-STKSNMGHPEPASGVAALIKVLLS-LEHGVWAPNLHYHTPN 363 (2512)
T ss_dssp SCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCEEE-CHHHHHCBCGGGHHHHHHHHHHHH-HTTTBCCCCSSCCSCC
T ss_pred HCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCCceee-cccccccccccccchhHHHHHHHH-HHCCCcCCCCCCCCCC
Confidence 99 9999999887755 45667764322 22221 156789999999888877655432 11133321
Q ss_pred -CC-----------------CCceEEEEEEcccceeeeeeEEec
Q 016094 364 -GE-----------------GLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 364 -G~-----------------~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
.. +..++++-+||.|.+-+.++|+-.
T Consensus 364 p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~ 407 (2512)
T 2vz8_A 364 PEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPN 407 (2512)
T ss_dssp TTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred ccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccC
Confidence 00 003678899999999999999854
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.2e-08 Score=112.82 Aligned_cols=135 Identities=11% Similarity=0.037 Sum_probs=96.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CCC----cC----EEEEEecCCC-------------------------C
Q 016094 92 LDARHAMLIEEVPKLGKEAALKAIKEWGQP-VSK----IT----HLIFGAVYGV-------------------------D 137 (395)
Q Consensus 92 ~~~~~~~~~~~~~~la~~Aa~~aL~~agi~-~~~----Id----~li~~s~~~~-------------------------~ 137 (395)
+..+..........|+.+++.+||+++|++ |.+ |+ ++++++..+. .
T Consensus 1200 I~~~ea~~mDp~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~ 1279 (1887)
T 2uv8_A 1200 ISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESF 1279 (1887)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHS
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcch
Confidence 344444455566779999999999999994 766 33 5666654320 0
Q ss_pred CCCHHHHHHHH-cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----c-----CC------
Q 016094 138 MPGADVRLMNL-LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----F-----HE------ 201 (395)
Q Consensus 138 ~p~~a~~l~~~-LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----~-----~~------ 201 (395)
....+.+++.. ||+.+. ...+..+|+|++.||..|.+.|.+|.++.+|+.|+|.++.. | ..
T Consensus 1280 ~n~~aa~is~~~lgl~GP---~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~~f~~m~als~~~~e~ 1356 (1887)
T 2uv8_A 1280 INTMSAWVNMLLISSSGP---IKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEF 1356 (1887)
T ss_dssp TTHHHHHHHHHTTCCCSC---CCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCHHHHH
T ss_pred hhHHHHHHHHHHcCCccc---eEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhh
Confidence 12346788884 999874 67899999999999999999999999999999999986420 0 00
Q ss_pred -----CCchh--hhhhhhhhhhccccEEEEEecCC
Q 016094 202 -----PTEAR--LDMLVGQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 202 -----~~~~~--~~~~~~~~l~GDGAaA~vL~~~~ 229 (395)
|.... +.....+++.||||+++||.+..
T Consensus 1357 ~~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~ 1391 (1887)
T 2uv8_A 1357 EHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQAD 1391 (1887)
T ss_dssp HTTCCGGGSCCTTBTTCCSBCBBCEEEEEEEEEHH
T ss_pred cccCCCccCcCCCcccCCCcccccceEEEEEccHH
Confidence 11110 11122578899999999999854
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.87 E-value=3.9e-10 Score=123.30 Aligned_cols=124 Identities=13% Similarity=0.058 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHcCCC-CCC----cC----EEEEEecCC-CC-----------------------CC-CHHHHHHH-
Q 016094 103 VPKLGKEAALKAIKEWGQP-VSK----IT----HLIFGAVYG-VD-----------------------MP-GADVRLMN- 147 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~-~~~----Id----~li~~s~~~-~~-----------------------~p-~~a~~l~~- 147 (395)
...|+.+|+.+||+++|++ |.+ |+ ++++++..+ +. .+ ..+.+++.
T Consensus 1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A 1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence 5669999999999999997 554 22 455554432 10 12 34567777
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----cCC----------------CCchh-
Q 016094 148 LLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----FHE----------------PTEAR- 206 (395)
Q Consensus 148 ~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----~~~----------------~~~~~- 206 (395)
.||+.+. ...+..+|+|++.||..|.+.|.+|.++.+|+.|+|.++.. |.. |....
T Consensus 1092 ~LGl~GP---s~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cR 1168 (1688)
T 2pff_A 1092 LISSSGP---IKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSR 1168 (1688)
T ss_dssp SCCCCCC---CCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCC
T ss_pred HcCCcCC---eEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhccC
Confidence 6999863 68999999999999999999999999999999999986531 100 11110
Q ss_pred -hhhhhhhhhhccccEEEEEecCC
Q 016094 207 -LDMLVGQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 207 -~~~~~~~~l~GDGAaA~vL~~~~ 229 (395)
+.....++++||||+++||.+.+
T Consensus 1169 PFd~~rdGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A 1169 PATTTRNGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp SSSSSCCCCCCCSCCEEEEEECSH
T ss_pred cCccCCCCCccccceEEEEeCcHH
Confidence 11122578999999999999864
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=2.6e-08 Score=112.04 Aligned_cols=129 Identities=13% Similarity=0.031 Sum_probs=93.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCC-CCC----cC----EEEEEecCCC--------------------CC----C-CHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQP-VSK----IT----HLIFGAVYGV--------------------DM----P-GADV 143 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~-~~~----Id----~li~~s~~~~--------------------~~----p-~~a~ 143 (395)
........|+.+++.+||+++|++ |.+ |+ ++++++..+. .. + ..+.
T Consensus 1181 ~~mDp~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa 1260 (1878)
T 2uv9_A 1181 QQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAA 1260 (1878)
T ss_dssp HHSCHHHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHH
Confidence 344456679999999999999998 665 33 6666654321 11 1 3467
Q ss_pred HHHHH-cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cC----------CC
Q 016094 144 RLMNL-LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FH----------EP 202 (395)
Q Consensus 144 ~l~~~-LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~----------~~ 202 (395)
+|... ||+.+. ...+..+|+|++.||.+|.+.|.+|.++.+||.|+|.++.. .. +|
T Consensus 1261 ~vs~~~lg~~GP---~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~~f~~m~als~~~de~a~g~~p 1337 (1878)
T 2uv9_A 1261 WVNMLLLSSTGP---IKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREP 1337 (1878)
T ss_dssp HHHHHTCCCCCC---BCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTTCCT
T ss_pred HHHHHhcCCCCC---eEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhhcCCCc
Confidence 88884 999874 67899999999999999999999999999999999986420 00 01
Q ss_pred Cchh--hhhhhhhhhhccccEEEEEecCC
Q 016094 203 TEAR--LDMLVGQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 203 ~~~~--~~~~~~~~l~GDGAaA~vL~~~~ 229 (395)
.... +.....+++.||||+++||.+..
T Consensus 1338 ~~~~RPfd~~r~Gfv~gEGag~vVL~~~~ 1366 (1878)
T 2uv9_A 1338 GEMSRPTSTTRNGFMESQGCGVQVIMTAQ 1366 (1878)
T ss_dssp TSSCCSSBTTCCCBCBBCEEEEEEEEEHH
T ss_pred ccCcCCCccCCCCCcccceeEEEEEeeHH
Confidence 1110 11122578999999999999854
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.47 E-value=0.21 Score=47.00 Aligned_cols=82 Identities=13% Similarity=0.056 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~ 177 (395)
...+...++++++|+++|++++|||.++.... ...+-..++++||++.... ... -+.++++-..+|..
T Consensus 231 ~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~~~-~~~l~~~GNt~sasi~~~L~~--- 302 (333)
T 4dfe_A 231 LAVNVLEKVAVEALEKANLSAEQIDWLIPHQA----NIRIMQSTCRKLGLPQERM-IVTVGEHGNTSAASIPLALDV--- 302 (333)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHh-hhhHHhcCchHHHHHHHHHHH---
Confidence 34456678899999999999999999876442 2234578899999986542 111 13344444445443
Q ss_pred HHHcC---CCCeEEEEE
Q 016094 178 IAENN---PGARVLVVC 191 (395)
Q Consensus 178 ll~~g---~~~~vLvv~ 191 (395)
+++.| +.+++|+++
T Consensus 303 ~~~~g~~~~Gd~vll~~ 319 (333)
T 4dfe_A 303 AVRDGRIKRGQNVLIEG 319 (333)
T ss_dssp HHHTTCSCTTCEEEEEE
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 34444 347888776
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=93.05 E-value=0.24 Score=47.27 Aligned_cols=82 Identities=15% Similarity=0.050 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~l 178 (395)
..+...++++++|+++|++++|||.++.... ...+-..++++||++.... ... -+.++++-..+|..+..-
T Consensus 252 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~----n~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sAsi~l~L~~~~~~ 326 (359)
T 3h78_A 252 ASQTLVRIAGEMLAAHELTLDDIDHVICHQP----NLRILDAVQEQLGIPQHKF-AVTVDRLGNMASASTPVTLAMFWPD 326 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCcCHHHh-hhhhhcccchHHHHHHHHHHHHHHh
Confidence 4556678999999999999999999876442 2344578899999986542 111 244566666666665544
Q ss_pred HHcCCCCeEEEEE
Q 016094 179 AENNPGARVLVVC 191 (395)
Q Consensus 179 l~~g~~~~vLvv~ 191 (395)
+ .+.+++|+++
T Consensus 327 l--~~Gd~vll~~ 337 (359)
T 3h78_A 327 I--QPGQRVLVLT 337 (359)
T ss_dssp S--CTTCEEEEEE
T ss_pred C--CCCCEEEEEE
Confidence 3 3447888776
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=93.01 E-value=0.34 Score=45.39 Aligned_cols=82 Identities=7% Similarity=-0.020 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~l 178 (395)
..+...++++++|+++|++++|||.++.... ...+-..++++||++.... ... -+.++++-..+|..+
T Consensus 222 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~--- 293 (323)
T 3il3_A 222 AVRELSNVVEETLLANNLDKKDLDWLVPHQA----NLRIITATAKKLEMDMSQV-VVTLDKYANNSAATVPVALDEA--- 293 (323)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTCCEEEECCS----CHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCcCHHHh-hccHhhcCchHHHHHHHHHHHH---
Confidence 4556678899999999999999999876442 2344578899999986542 112 233445555555443
Q ss_pred HHcC---CCCeEEEEEe
Q 016094 179 AENN---PGARVLVVCC 192 (395)
Q Consensus 179 l~~g---~~~~vLvv~~ 192 (395)
++.| +.+++|+++.
T Consensus 294 ~~~g~~~~Gd~vll~~~ 310 (323)
T 3il3_A 294 IRDGRIQRGQLLLLEAF 310 (323)
T ss_dssp HHTTSSCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 3478888763
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=93.01 E-value=0.19 Score=47.49 Aligned_cols=89 Identities=13% Similarity=0.075 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce-------e-ecc--------ccch
Q 016094 104 PKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLM-------I-YSQ--------GCYM 167 (395)
Q Consensus 104 ~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~-------~-i~~--------~C~s 167 (395)
...+++..++.|+++|++|+|+|.|+.+-.. +..-.+...+..++|++.... .. + -++ ||+.
T Consensus 206 aPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~-q~g~~il~~l~~~~g~~~~~~-~~dcg~~iy~~~~~~~~ggsg~~csa 283 (347)
T 3lma_A 206 APAAADTIKQHLEDLGRTPDDYDLILTGDLS-GVGSPILKDLLKEEGINVGTK-HNDCGLMIYTPDQQVFAGGSGCACSA 283 (347)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEEESCH-HHHHHHHHHHHHHTTCCCGGG-EEEGGGTSSCC---------CCCCHH
T ss_pred hHHHHHHHHHHHHHhCCCHHHcCEEecCChH-HHHHHHHHHHHHHcCCChhHC-ccccceEEecCCCcccCCCCccccHH
Confidence 3456677799999999999999999854211 111234567888889874321 11 1 223 4444
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeccc
Q 016094 168 GGAVIRHAKDIAENNPGARVLVVCCDIT 195 (395)
Q Consensus 168 ~~~al~~A~~ll~~g~~~~vLvv~~e~~ 195 (395)
.+..=.+ ...|+.|..++||+|+.-..
T Consensus 284 ~v~~~~~-~~~~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 284 VVTFAHI-FKEIEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHHHTH-HHHHHTTSCSEEEEEEEEEC
T ss_pred HHHHHHH-HHHHhcCcccEEEEEecccc
Confidence 4333233 33477788999999987654
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=92.81 E-value=0.38 Score=45.42 Aligned_cols=87 Identities=17% Similarity=0.251 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~ 177 (395)
.......++++++|+++|++++|||.++.... ...+-..++++||++.... ... -+.++++-..+|..+..
T Consensus 243 ~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~~~ 317 (345)
T 3s21_A 243 EGIKLAQKTFVAAKQVLGWAVEELDQFVIHQV----SRPHTAAFVKSFGIDPAKV-MTIFGEHGNIGPASVPIVLSKLKE 317 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCcCHHHc-eeeHhhcCchHHHHHHHHHHHHHH
Confidence 34556678889999999999999999986442 2234567899999986542 111 24455555555555443
Q ss_pred HHHcCCCCeEEEEEec
Q 016094 178 IAENNPGARVLVVCCD 193 (395)
Q Consensus 178 ll~~g~~~~vLvv~~e 193 (395)
-=...+.+++|+++.-
T Consensus 318 ~g~~~~Gd~vll~~~G 333 (345)
T 3s21_A 318 LGRLKKGDRIALLGIG 333 (345)
T ss_dssp HTCCCTTCEEEEEEEE
T ss_pred cCCCCCCCEEEEEEEC
Confidence 2111234788887743
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=92.74 E-value=0.32 Score=45.23 Aligned_cols=83 Identities=11% Similarity=0.011 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce----eeccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLM----IYSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~----~i~~~C~s~~~al~~A~~l 178 (395)
..+...++++++|+++|++++|||.++..... ......+.+.||++.... .. .-+..+++...+|..+
T Consensus 216 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~----~~~~d~i~~~lg~~~~~~-~~~~~~~Gn~~~As~~~~L~~~--- 287 (317)
T 1hnj_A 216 AVTELAHIVDETLAANNLDRSQLDWLVPHQAN----LRIISATAKKLGMSMDNV-VVTLDRHGNTSAASVPCALDEA--- 287 (317)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEECCSC----HHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC----HHHHHHHHHHcCCCHHHh-HhhHhhhCcHHHHHHHHHHHHH---
Confidence 34456788999999999999999998764422 122346888999875431 11 1244555556555444
Q ss_pred HHcC---CCCeEEEEEec
Q 016094 179 AENN---PGARVLVVCCD 193 (395)
Q Consensus 179 l~~g---~~~~vLvv~~e 193 (395)
++.| +.+++|+++.-
T Consensus 288 ~~~~~~~~G~~vll~~~G 305 (317)
T 1hnj_A 288 VRDGRIKPGQLVLLEAFG 305 (317)
T ss_dssp HHTTCSCTTCEEEEEEEE
T ss_pred HHhCCCCCCCEEEEEEEc
Confidence 4444 34788887643
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=92.46 E-value=0.28 Score=46.61 Aligned_cols=82 Identities=10% Similarity=0.008 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHH-
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKD- 177 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~- 177 (395)
..+...++++++|+++|++++|||.++.... ...+-..++++||++.... ... -+.++++-..+|..+..
T Consensus 242 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~Lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~~~~ 316 (354)
T 4efi_A 242 TLNAVPKLVSRTLDIAGRDKDSYDAFLFHQA----NLFMLKHLAKKAGLPAERV-PVNIGEYGNTSCASIPLLITTELKD 316 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCC----CHHHHHHHHHHTTCCGGGS-CCCHHHHCBCGGGHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHhCcCHHHH-HHHHhhhCcHHHHHHHHHHHHHHHh
Confidence 4566778899999999999999999986542 2234567899999986542 111 34566666677765543
Q ss_pred -HHHcCCCCeEEEEE
Q 016094 178 -IAENNPGARVLVVC 191 (395)
Q Consensus 178 -ll~~g~~~~vLvv~ 191 (395)
.++.| +++|+++
T Consensus 317 g~~~~G--d~vll~~ 329 (354)
T 4efi_A 317 RLKEET--LQLGMFG 329 (354)
T ss_dssp HHHHSC--EEEEEEE
T ss_pred CCCCCC--CEEEEEE
Confidence 34444 7788777
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=92.43 E-value=0.43 Score=44.20 Aligned_cols=82 Identities=10% Similarity=0.009 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc---ceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNR---LMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~---~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+-..++++++|+++|++++|||.++..... ......+.+.||++..... ...-+..+++...+|..+ +
T Consensus 210 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~----~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~ 282 (313)
T 1zow_A 210 AVRIMGDASTRVVEKANLTSDDIDLFIPHQAN----IRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---L 282 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECCSC----HHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC----HHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---H
Confidence 34566788999999999999999998764432 2233457888998653310 111244555555555443 4
Q ss_pred HcC---CCCeEEEEE
Q 016094 180 ENN---PGARVLVVC 191 (395)
Q Consensus 180 ~~g---~~~~vLvv~ 191 (395)
+.+ +.+++|+++
T Consensus 283 ~~~~~~~g~~vl~~~ 297 (313)
T 1zow_A 283 KNGKLKDDDTIVLVG 297 (313)
T ss_dssp HTTCCCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 444 346777766
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=92.38 E-value=0.3 Score=46.22 Aligned_cols=84 Identities=12% Similarity=-0.045 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce-e----eccccchHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLM-I----YSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~-~----i~~~C~s~~~al~~A~~ 177 (395)
......++++++|+++|++++|||.+++.. ....+-..++++||++.... .. . -+.++++-..+|..+..
T Consensus 247 a~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~~~~i~~~~~~~Lgl~~~~~-~~~~l~~~GNtssasi~~~L~~~~~ 321 (350)
T 4ewp_A 247 AVWSMAKVAREALDAAGVEPEDLAAFIPHQ----ANMRIIDEFAKQLKLPESVV-VARDIADAGNTSAASIPLAMHRLLE 321 (350)
T ss_dssp HHHTHHHHHHHHHHHHTCCGGGEEEEEECC----SCHHHHHHHHHHTTCCTTSE-ECCTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHhhcCChhHhceEEecC----CCHHHHHHHHHHcCcChHhE-EecccccccchHHHHHHHHHHHHHH
Confidence 445667889999999999999999988643 22344567899999976541 11 1 23344555555544433
Q ss_pred HHHcCCCCeEEEEE
Q 016094 178 IAENNPGARVLVVC 191 (395)
Q Consensus 178 ll~~g~~~~vLvv~ 191 (395)
-=.-.+.+++|+++
T Consensus 322 ~g~~~~Gd~vll~~ 335 (350)
T 4ewp_A 322 ENPELSGGLALQIG 335 (350)
T ss_dssp HCGGGTTSEEEEEE
T ss_pred hCCCCCcCEEEEEE
Confidence 21111347888776
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=92.33 E-value=0.41 Score=44.18 Aligned_cols=83 Identities=10% Similarity=0.017 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc---eeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRL---MIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~---~~i~~~C~s~~~al~~A~~ll 179 (395)
..+...++++++|+++|++++|||.++...... .....+.+.||++...... ..-+..+++.+.+|..+ +
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~----~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~ 280 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQANV----RIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---I 280 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCH----HHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---H
Confidence 344667899999999999999999887644221 2234578899986543100 11244556666555544 4
Q ss_pred HcC---CCCeEEEEEe
Q 016094 180 ENN---PGARVLVVCC 192 (395)
Q Consensus 180 ~~g---~~~~vLvv~~ 192 (395)
+.| +.+++|+++.
T Consensus 281 ~~g~~~~G~~~l~~~~ 296 (309)
T 2ebd_A 281 KEGKVKRGDLILMTAM 296 (309)
T ss_dssp HTTCCCTTCEEEEEEE
T ss_pred HcCCCCCCCEEEEEEE
Confidence 444 3467777763
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=92.31 E-value=0.35 Score=45.47 Aligned_cols=82 Identities=13% Similarity=0.050 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc-ccc-ce--eeccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPS-VNR-LM--IYSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~-~~~-~~--~i~~~C~s~~~al~~A~~l 178 (395)
..+...++++++|+++|++++|||.++..... ...-..+.+.||++.. ... .. .-+.++++...+|.. +
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~----~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~---~ 301 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQAN----LRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDR---L 301 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSC----HHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHH---H
Confidence 34566788999999999999999998764422 1233468889999765 310 11 123344555555443 3
Q ss_pred HHcC---CCCeEEEEE
Q 016094 179 AENN---PGARVLVVC 191 (395)
Q Consensus 179 l~~g---~~~~vLvv~ 191 (395)
++.| +.+++|+++
T Consensus 302 ~~~g~~~~G~~vll~~ 317 (339)
T 1mzj_A 302 VRSGAVPGGGPALMIG 317 (339)
T ss_dssp HHHTSSCTTCEEEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4444 346777765
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=92.17 E-value=0.33 Score=45.52 Aligned_cols=82 Identities=10% Similarity=0.047 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc---eeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRL---MIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~---~~i~~~C~s~~~al~~A~~ll 179 (395)
..+...++++++|+++|++++|||.++..... ...-..+.+.||++...... ..-+.++++...+|..+ +
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~~----~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~ 294 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQAN----TRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L 294 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCCC----HHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC----HHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence 34567788999999999999999998764422 22335688899987543101 11234455555555433 4
Q ss_pred HcC---CCCeEEEEE
Q 016094 180 ENN---PGARVLVVC 191 (395)
Q Consensus 180 ~~g---~~~~vLvv~ 191 (395)
+.+ +.+++|+++
T Consensus 295 ~~~~~~~G~~vll~~ 309 (331)
T 2x3e_A 295 RQGILRDGGNMVLTG 309 (331)
T ss_dssp HTTCSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 444 346777766
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=92.09 E-value=0.35 Score=46.16 Aligned_cols=82 Identities=11% Similarity=0.022 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~l 178 (395)
......++++++|+++|++++|||.++.... ...+-..++++||++.... ... -+.++++-..+|.. +
T Consensus 264 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~----n~~i~~~~~~~Lgl~~ek~-~~~l~~~GNtssAsipl~L~~---~ 335 (365)
T 3gwa_A 264 SLAEVPRAADRLLALAGEPRENIDCFVLHQA----NRFMLDALRKKMKIPEHKF-PVLMEHCGNTVSSTLPLALET---M 335 (365)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCC----CHHHHHHHHHHHTCCGGGS-CCCCTTTCBCGGGHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHH-HHHHhcccchHHHHHHHHHHH---H
Confidence 4556678899999999999999999986442 2334578899999986542 111 23334444444433 3
Q ss_pred HHcC---CCCeEEEEEe
Q 016094 179 AENN---PGARVLVVCC 192 (395)
Q Consensus 179 l~~g---~~~~vLvv~~ 192 (395)
++.| +.+++|+++.
T Consensus 336 ~~~g~~~~Gd~vll~~f 352 (365)
T 3gwa_A 336 RANGTLARGMRLMLLGF 352 (365)
T ss_dssp HHTTCCCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 3478888773
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=91.91 E-value=0.41 Score=44.76 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc-cccce----eeccccchHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPS-VNRLM----IYSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~-~~~~~----~i~~~C~s~~~al~~A~~ 177 (395)
......++++++|+++|++++|||.++..... ......+.+.||++.. .. .. .-+.++++...+|..+
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~~----~~~~~~~~~~lg~~~~~~~-~~~~~~~Gnt~sAs~~~~L~~~-- 302 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQAN----SRINELLVKNLQLRPDAVV-ANDIEHTGNTSAASIPLAMAEL-- 302 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSC----HHHHHHHHHHHTCCTTCEE-CCTHHHHCBCGGGHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCchhhh-hhhhhhhCcHHHHHHHHHHHHH--
Confidence 34567788999999999999999998865432 2234567889999765 21 11 1133444544444433
Q ss_pred HHHcC---CCCeEEEEEe
Q 016094 178 IAENN---PGARVLVVCC 192 (395)
Q Consensus 178 ll~~g---~~~~vLvv~~ 192 (395)
+..+ +.+++|+++.
T Consensus 303 -~~~~~~~~g~~~l~~~~ 319 (335)
T 1u6e_A 303 -LTTGAAKPGDLALLIGY 319 (335)
T ss_dssp -HHHTSSCTTCEEEEEEE
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 3467777663
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=91.51 E-value=0.55 Score=43.64 Aligned_cols=82 Identities=16% Similarity=0.048 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc---ceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNR---LMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~---~~~i~~~C~s~~~al~~A~~ll 179 (395)
..+-..++++++|+++|++++|||.++...... .....+.+.||++..... ...-+..+++...+|.. ++
T Consensus 218 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~----~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~---~l 290 (322)
T 1ub7_A 218 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQANL----RIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKE---AV 290 (322)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCH----HHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHH---HH
Confidence 345667889999999999999999987644321 223458888998653310 11123444555555443 34
Q ss_pred HcC---CCCeEEEEE
Q 016094 180 ENN---PGARVLVVC 191 (395)
Q Consensus 180 ~~g---~~~~vLvv~ 191 (395)
+.| +.+++|+++
T Consensus 291 ~~g~~~~g~~~l~~~ 305 (322)
T 1ub7_A 291 DAGRIREGDHVLLVS 305 (322)
T ss_dssp HHTSSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 444 236666665
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=89.23 E-value=0.68 Score=44.52 Aligned_cols=49 Identities=12% Similarity=0.057 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSV 155 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~ 155 (395)
..+-..++++++|+++|++++|||.++.... ...+-..+.++||++...
T Consensus 285 ~~~~~~~~i~~aL~~agl~~~dId~~~~H~~----~~~i~d~~~~~lgl~~~k 333 (393)
T 1ted_A 285 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPG----GPKIIEQSVRSLGISAEL 333 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEECCS----CHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEECCC----cHHHHHHHHHHcCCCHHH
Confidence 4455677889999999999999998876432 122345688899997654
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=88.87 E-value=0.47 Score=45.11 Aligned_cols=82 Identities=27% Similarity=0.282 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-----ccccchHHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY-----SQGCYMGGAVIRHAK 176 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i-----~~~C~s~~~al~~A~ 176 (395)
.......++++++|+++|++++|||.+|+.+...... ..++++||++.... ...+ +.++++-..+|..+.
T Consensus 235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~~----~~~~~~lgl~~ek~-~~~~~~~~GNt~aAsipl~L~~~~ 309 (357)
T 3s3l_A 235 RYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGTG----HELHDLLGLPDERT-SWAYGRTTGHVGAGDQYAGLAHLV 309 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCSS----CCHHHHHTSCGGGB-THHHHHHHCBCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHH----HHHHHHcCCCHHHh-HHHhccccccchHhHHHHHHHHHH
Confidence 4556778899999999999999999999644433112 35788899986542 2222 223455555555443
Q ss_pred HHHHcC---CCCeEEEEE
Q 016094 177 DIAENN---PGARVLVVC 191 (395)
Q Consensus 177 ~ll~~g---~~~~vLvv~ 191 (395)
+.| +.+++|+++
T Consensus 310 ---~~g~l~~Gd~vll~~ 324 (357)
T 3s3l_A 310 ---ENALVQPGDRVLLFG 324 (357)
T ss_dssp ---HTTCCCTTCEEEEEC
T ss_pred ---HcCCCCCCCEEEEEE
Confidence 333 236777665
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=88.38 E-value=0.56 Score=45.24 Aligned_cols=84 Identities=13% Similarity=0.081 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHc-CC--CCccc-cce--eeccccchHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLL-GL--EPSVN-RLM--IYSQGCYMGGAVIRHA 175 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~L-Gl--~~~~~-~~~--~i~~~C~s~~~al~~A 175 (395)
.......++++++|+++|++++|||.++... ..+.+-..++++| |+ +.... ... .-+.++++-..+|..+
T Consensus 288 ~a~~~~~~~i~~~L~~~gl~~~dId~~v~Hq----an~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~~ 363 (392)
T 3led_A 288 EVVPLVSEMIIEHAREIGIDPHGLKRMWLHQ----ANINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHKH 363 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECS----SCHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEEEcC----CCHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHHH
Confidence 4566778889999999999999999888532 2223445677775 75 32211 011 1344555555666554
Q ss_pred HHHHHcCCCCeEEEEE
Q 016094 176 KDIAENNPGARVLVVC 191 (395)
Q Consensus 176 ~~ll~~g~~~~vLvv~ 191 (395)
...++ +.+++|+++
T Consensus 364 ~~~~~--~Gd~vll~g 377 (392)
T 3led_A 364 QDDMA--QGDLGLICS 377 (392)
T ss_dssp CTTCC--TTCEEEEEE
T ss_pred hCCCC--CCCEEEEEE
Confidence 32222 236777776
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=87.77 E-value=0.82 Score=43.77 Aligned_cols=45 Identities=24% Similarity=0.219 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcc
Q 016094 106 LGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSV 155 (395)
Q Consensus 106 la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~ 155 (395)
-.. +++++|+++|++++|||.++..... ...-..+.++||++...
T Consensus 254 ~~~-~i~~aL~~agl~~~dId~v~~H~~~----~~i~d~~~~~lgl~~~k 298 (382)
T 1u0m_A 254 LAP-ALKELAGEHGWDASDLDFYIVHAGG----PRILDDLSTFLEVDPHA 298 (382)
T ss_dssp HHH-HHHHHHHTTSCCSSCCSCCEEECSH----HHHHHHHHHHSCSCGGG
T ss_pred HHH-HHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHH
Confidence 344 8999999999999999998875432 12334688899997654
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=86.50 E-value=1.3 Score=42.68 Aligned_cols=79 Identities=14% Similarity=0.100 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce------eeccccchHHHHHHHHHHHHH
Q 016094 107 GKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLM------IYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 107 a~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~------~i~~~C~s~~~al~~A~~ll~ 180 (395)
...|++++|+++|++++|||.+.+.- ........+.+.||+...+.... -...+|+|....+....+|-.
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~ 371 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEANE----AFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQK 371 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHh
Confidence 45789999999999999999998532 22234456788899875431010 011145444444444444444
Q ss_pred cCCCCeEEEE
Q 016094 181 NNPGARVLVV 190 (395)
Q Consensus 181 ~g~~~~vLvv 190 (395)
.+ .++.|+.
T Consensus 372 ~~-~~~gl~~ 380 (395)
T 4e1l_A 372 RK-VETGLAT 380 (395)
T ss_dssp HT-CSEEEEE
T ss_pred cC-CCEEEEE
Confidence 43 5666553
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=85.55 E-value=2.1 Score=41.18 Aligned_cols=78 Identities=13% Similarity=0.059 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCC--CCccccce-------eeccccchHHHHHHHHHH
Q 016094 107 GKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGL--EPSVNRLM-------IYSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 107 a~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl--~~~~~~~~-------~i~~~C~s~~~al~~A~~ 177 (395)
...|+++||+++|++++|||++=..-+ + ........+.||+ +..+ .- .-+...++++..+..+..
T Consensus 298 ~~~a~~~al~~Agl~~~dId~ie~hea--f--a~~~l~~~~~lg~~~~~~~--vn~~Gg~~a~GHp~gAsG~~~~~~~~~ 371 (401)
T 1ulq_A 298 PVPATRKALERAGLSFSDLGLIELNEA--F--AAQALAVLREWSLSMEDQR--LNPNGGAIALGHPLGASGARILTTLVH 371 (401)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECCS--B--HHHHHHHHHHHTCCTTCTT--BSTTCCHHHHCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEecc--h--HHHHHHHHHHcCCCCCCCc--cCCCCcccccCCCcchHHHHHHHHHHH
Confidence 368999999999999999998865421 1 1122233456887 3222 11 111122334444555555
Q ss_pred HHHcCCCCeEEEE
Q 016094 178 IAENNPGARVLVV 190 (395)
Q Consensus 178 ll~~g~~~~vLvv 190 (395)
.|+.+..+++|+.
T Consensus 372 ~L~~~~~~~gl~~ 384 (401)
T 1ulq_A 372 EMRRRKVQFGLAT 384 (401)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHhhcCCCEEEEE
Confidence 5565555666543
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=85.52 E-value=1.3 Score=47.73 Aligned_cols=76 Identities=8% Similarity=-0.079 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc------eeeccccchHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRL------MIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~------~~i~~~C~s~~~al~~A~ 176 (395)
......++++++|+++|++++|||.++.... ...+-..+.++||++...... -.-+.++++-..+|..+.
T Consensus 862 ~~~~~~~~~~~al~~agl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~ 937 (979)
T 3tsy_A 862 ISENVEKCLTQAFDPLGISDWNSLFWIAHPG----GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMR 937 (979)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGSEEEECCS----CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCcccceEEECCC----ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHH
Confidence 4556778999999999999999999875432 223446788999998754201 114567778888888877
Q ss_pred HHHHcC
Q 016094 177 DIAENN 182 (395)
Q Consensus 177 ~ll~~g 182 (395)
.-+..|
T Consensus 938 ~~~~~G 943 (979)
T 3tsy_A 938 KKSLKG 943 (979)
T ss_dssp HHHHHT
T ss_pred hhhccc
Confidence 766665
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=84.77 E-value=1.5 Score=42.10 Aligned_cols=76 Identities=8% Similarity=-0.005 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeecc--------ccchHHHHHHHHHHH
Q 016094 107 GKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQ--------GCYMGGAVIRHAKDI 178 (395)
Q Consensus 107 a~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~~--------~C~s~~~al~~A~~l 178 (395)
...|++++|+++|++++|||.+.+.- ........+.+.||+...+ . .++. ..++++..+..+...
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~~~--v-~~~gg~~~~GH~~gasG~~~~~~~~~~ 366 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINE----AFAAQYLAVEKELDLDREK--V-NVNGSGVGLGHPIGCTGARITVSLIHE 366 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGGG--B-STTCCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCC----chHHHHHHHHHHhCCCCCC--C-CCCcchHhhCCcHHHHHHHHHHHHHHH
Confidence 46789999999999999999998532 1223445677889987543 1 1221 123344444444444
Q ss_pred HHcCCCCeEEE
Q 016094 179 AENNPGARVLV 189 (395)
Q Consensus 179 l~~g~~~~vLv 189 (395)
|+....++.|+
T Consensus 367 L~~~~~~~gl~ 377 (394)
T 3ss6_A 367 LKRRGLEKGIA 377 (394)
T ss_dssp HHHHTCCEEEE
T ss_pred HHhcCCCEEEE
Confidence 54444566665
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=83.54 E-value=2.2 Score=40.90 Aligned_cols=79 Identities=14% Similarity=0.113 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-----ceeeccccchHHHHHHHHHHHHHc
Q 016094 107 GKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNR-----LMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 107 a~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~-----~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
...|+++||+++|++++|||++-..- .....+-.+.+.||+...+.. ...-+..+++++..+..+...|+.
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~d----~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 367 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEANE----AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKR 367 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----ccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhc
Confidence 46899999999999999999987532 122223346788998643310 001122233444444444444554
Q ss_pred CCCCeEEE
Q 016094 182 NPGARVLV 189 (395)
Q Consensus 182 g~~~~vLv 189 (395)
...++.|+
T Consensus 368 ~~~~~gl~ 375 (392)
T 2vu1_A 368 RGARKGLA 375 (392)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 44566665
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=82.90 E-value=2.1 Score=41.29 Aligned_cols=44 Identities=11% Similarity=0.178 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcc
Q 016094 108 KEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSV 155 (395)
Q Consensus 108 ~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~ 155 (395)
..|++++|+++|++++|||.+-...+ .........+.||+...+
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~hda----f~~~~l~~~~~lg~~~~~ 351 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELNEA----FASVVLKFQKDLNIPDEK 351 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCS----BHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCh----hHHHHHHHHHHhCCCCCC
Confidence 57899999999999999999976432 112234566789987543
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=81.93 E-value=3.4 Score=40.02 Aligned_cols=84 Identities=8% Similarity=-0.052 Sum_probs=55.9
Q ss_pred HHhHHHHHHHhhcccCCCCCCce-EEEEcCC----ChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHH
Q 016094 278 GKYIDKLLADAMSPIGISDWNSL-FYIVHPG----GKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVR 352 (395)
Q Consensus 278 ~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~----~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~ 352 (395)
.+...++++++|+++|+++ +|| .+++-.. ....-..+.+.||++.+-... .+.+.++++-..+|..+.
T Consensus 138 ~~La~~Aa~~AL~~agi~~-~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~------~v~~~~Cagg~~AL~~A~ 210 (413)
T 3v7i_A 138 QAYGERAARGALQIAGLDV-ADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLL------PATQWACVAGTRSLALAA 210 (413)
T ss_dssp HHHHHHHHHHHHHHHTCCG-GGCCEEEEECCSSCCSSCHHHHHHHHTTCCTTCEEE------EESSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCH-HHCCEEEEEccCCCCcCHHHHHHHHHhCCCCCceEE------EeeCCccHHHHHHHHHHH
Confidence 3445678899999999997 999 6665332 234556788999998743222 234788888888887665
Q ss_pred hhhhhhhcccCCCCCceEEEEEE
Q 016094 353 KKSTEERKATTGEGLEYGVLFGF 375 (395)
Q Consensus 353 ~~~~~~g~l~~G~~~d~vll~~~ 375 (395)
.- ++.|. .++||+++.
T Consensus 211 ~~------i~ag~-~~~vLvvg~ 226 (413)
T 3v7i_A 211 DL------VAADP-DRVVLVVIS 226 (413)
T ss_dssp HH------HHHCT-TCEEEEEEE
T ss_pred HH------HhcCC-CCEEEEEEE
Confidence 53 22221 178887764
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=81.32 E-value=3.9 Score=40.89 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee--------ccccchHHHHHHHHHHH
Q 016094 107 GKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY--------SQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 107 a~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i--------~~~C~s~~~al~~A~~l 178 (395)
...|++++|+++|++++|||++=+.. .++.......+.||+...-..-..+ +...++++.++..+...
T Consensus 319 ~~~a~~~al~~agl~~~did~~E~~d----AF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~ 394 (520)
T 4egv_A 319 SVTAVNEALRVAGIGLDDVAAFDLYS----CFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNE 394 (520)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECC----SSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEEeC----CcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHH
Confidence 46789999999999999999886654 3455667788889984321001112 22356677777777777
Q ss_pred HHcCCCCeEEEEE
Q 016094 179 AENNPGARVLVVC 191 (395)
Q Consensus 179 l~~g~~~~vLvv~ 191 (395)
|+.+..++.|+.+
T Consensus 395 lr~~~~~~~L~~~ 407 (520)
T 4egv_A 395 MRDKPGQFALVGA 407 (520)
T ss_dssp HHHSTTCEEEEEE
T ss_pred HhcCCCCceEEeC
Confidence 8877778888753
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=81.21 E-value=2.5 Score=40.58 Aligned_cols=44 Identities=14% Similarity=0.153 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 016094 107 GKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPS 154 (395)
Q Consensus 107 a~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~ 154 (395)
...|++++|+++|++++|||.+-+.- ........+.+.||+...
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d----~f~~~~~~~~~~lg~~~~ 340 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANE----AFAAQSVAVIRDLNIDMN 340 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hHHHHHHHHHHHhCCCCC
Confidence 46789999999999999999998532 122334456778898653
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=81.12 E-value=3.7 Score=38.86 Aligned_cols=80 Identities=11% Similarity=0.011 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHcC------CCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-ee-----eccccchHHHH
Q 016094 104 PKLGKEAALKAIKEWG------QPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRL-MI-----YSQGCYMGGAV 171 (395)
Q Consensus 104 ~~la~~Aa~~aL~~ag------i~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~-~~-----i~~~C~s~~~a 171 (395)
.+...++++++|+++| ++++|||.+ . +... ..+-..+.+.||++...... .. -+.++++...+
T Consensus 266 ~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~-H~~~---~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~ 340 (374)
T 2h84_A 266 GSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-I-HTGG---KSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFV 340 (374)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-E-CCCC---HHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccccCCChhhcCEe-E-CCCC---HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHH
Confidence 4556678899999999 999999998 3 4322 22345788999997654210 01 13344444444
Q ss_pred HHHHHHHHHcC-CCCeEEEEE
Q 016094 172 IRHAKDIAENN-PGARVLVVC 191 (395)
Q Consensus 172 l~~A~~ll~~g-~~~~vLvv~ 191 (395)
|..+ ++.+ +.+++|+++
T Consensus 341 L~~~---~~~~~~Gd~vll~~ 358 (374)
T 2h84_A 341 MDHA---RKSKSLPTYSISLA 358 (374)
T ss_dssp HHHH---HTCSCCCSEEEEEE
T ss_pred HHHH---HhhcCCCCeEEEEE
Confidence 4443 3444 356777766
|
| >2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A* | Back alignment and structure |
|---|
Probab=80.60 E-value=4.6 Score=38.81 Aligned_cols=84 Identities=10% Similarity=-0.023 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCCCCCCCHHHHHHHHcCCCCccccc----e--eeccccchHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITH----LIFGAVYGVDMPGADVRLMNLLGLEPSVNRL----M--IYSQGCYMGGAVI 172 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~----li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~----~--~i~~~C~s~~~al 172 (395)
..+...++++++|+++|++++ ||. ++.... ...+-..+.++||++...... . .-+.++++...+|
T Consensus 288 ~~~~~~~~i~~~L~~agl~~~-id~~di~~v~Hq~----~~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L 362 (406)
T 2d3m_A 288 ISNNVEACLIDVFKSVGITPP-EDWNSLFWIPHPG----GRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYIL 362 (406)
T ss_dssp HHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEECCS----CHHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCC-CCccceEEEECCC----CHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHH
Confidence 445667889999999999998 887 654332 223345688899997653211 1 1255666666777
Q ss_pred HHHHHHH-HcC-----C-CCeEEEEE
Q 016094 173 RHAKDIA-ENN-----P-GARVLVVC 191 (395)
Q Consensus 173 ~~A~~ll-~~g-----~-~~~vLvv~ 191 (395)
..+..-= +.| + .+++|+++
T Consensus 363 ~~~~~~g~~~G~~~~g~~~d~vll~~ 388 (406)
T 2d3m_A 363 DEMRRKSAAKGLETYGEGLEWGVLLG 388 (406)
T ss_dssp HHHHHHHHHTTCSBTTTTCSEEEEEE
T ss_pred HHHHHhccccCCCccCCCcceEEEEE
Confidence 6554322 333 1 16777776
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 395 | ||||
| d1teda_ | 372 | c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte | 2e-98 | |
| d1bi5a1 | 235 | c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med | 2e-73 | |
| d1ee0a2 | 160 | c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon | 9e-53 | |
| d1bi5a2 | 154 | c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M | 2e-52 | |
| d1u0ua2 | 156 | c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S | 1e-48 | |
| d1u0ma1 | 200 | c.95.1.2 (A:2-201) Putative polyketide synthase SC | 8e-47 | |
| d1u0ma2 | 148 | c.95.1.2 (A:202-349) Putative polyketide synthase | 1e-30 | |
| d1xpma1 | 166 | c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA | 1e-15 | |
| d1u6ea1 | 184 | c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (Fa | 6e-11 | |
| d1hnja1 | 174 | c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH | 2e-09 | |
| d1ub7a1 | 172 | c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH | 4e-08 | |
| d1mzja1 | 181 | c.95.1.2 (A:3-183) Priming beta-ketosynthase from | 2e-07 | |
| d1mzja2 | 153 | c.95.1.2 (A:184-336) Priming beta-ketosynthase fro | 8e-07 | |
| d1u6ea2 | 148 | c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa | 4e-06 | |
| d1hnja2 | 143 | c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa | 0.004 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 295 bits (757), Expect = 2e-98
Identities = 94/382 (24%), Positives = 174/382 (45%), Gaps = 16/382 (4%)
Query: 11 HRSRGPS---AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIR 67
P A I + T TP Q+D D RV +E+ R+ ++S I
Sbjct: 2 QLPPAPPTTVAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRIT 58
Query: 68 KRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITH 127
R + + L ++ + ++ R + E L + + +A+ ++I
Sbjct: 59 TRRMAV--DPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGL 116
Query: 128 LIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARV 187
L+ G PG DV ++ LGL PS++R+++ GC + A + +P +
Sbjct: 117 LVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKA 176
Query: 188 LVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQM 247
LVVC ++ ++ ++ +V ++FGDG AA +IGA E V S
Sbjct: 177 LVVCIELCSVNA--VFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQ 234
Query: 248 TVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSLFYIVHPG 307
+ NTE+ +V + G LS++LP I + ++ + + G+ + + +HPG
Sbjct: 235 LLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPG 294
Query: 308 GKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGL 367
G I++Q ++LG+ E S L+ +GN+ + S++F+L+ + ++A + + +
Sbjct: 295 GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV------QQAESAKAI 348
Query: 368 EYGVLFGFGPGITVETVVLRSI 389
GV F FGPG+TVE ++ I
Sbjct: 349 STGVAFAFGPGVTVEGMLFDII 370
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 227 bits (578), Expect = 2e-73
Identities = 149/237 (62%), Positives = 181/237 (76%), Gaps = 2/237 (0%)
Query: 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRI 60
M +V R+ GP A ILAIGTA P NC Q+ YPDF+F++TNSEHK ELKEKF+R+
Sbjct: 1 MVSVSEIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRM 59
Query: 61 CERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQ 120
C++S I++RY YLTEEILKENPN+ Y APSLDAR M++ EVP+LGKEAA+KAIKEWGQ
Sbjct: 60 CDKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQ 119
Query: 121 PVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180
P SKITHLI GVDMPGAD +L LLGL P V R M+Y QGC+ GG V+R AKD+AE
Sbjct: 120 PKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE 179
Query: 181 NNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERP 237
NN GARVLVVC ++T + F P++ LD LVGQA+FGDGAAA I+G+DP + E+P
Sbjct: 180 NNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEI-EKP 235
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Score = 170 bits (433), Expect = 9e-53
Identities = 88/157 (56%), Positives = 123/157 (78%)
Query: 235 ERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGI 294
ERP+F+++S Q +P+TE + HL+E G + L +D+P+++ K I+ A+SP+GI
Sbjct: 3 ERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGI 62
Query: 295 SDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354
+DWNS+F++VHPGG+ ILDQVE+ L L ++KL ASR+ LSEYGNL + VLFI+D+VRK+
Sbjct: 63 TDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKR 122
Query: 355 STEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391
S E K+TTGEGL+ GVLFGFGPG+TVETVVLRS+ +
Sbjct: 123 SMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVRV 159
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 170 bits (431), Expect = 2e-52
Identities = 87/154 (56%), Positives = 115/154 (74%)
Query: 238 LFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDW 297
+F+++ +Q P++E + GHL+E G + L KD+P I+ K I K L +A P+GISD+
Sbjct: 1 IFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDY 60
Query: 298 NSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTE 357
NS+F+I HPGG ILDQVEQ L L EK+ A+R LSEYGN+ + VLFILD++RKKST+
Sbjct: 61 NSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQ 120
Query: 358 ERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391
TTGEGLE+GVLFGFGPG+T+ETVVLRS+ I
Sbjct: 121 NGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 154
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Score = 159 bits (404), Expect = 1e-48
Identities = 75/154 (48%), Positives = 105/154 (68%)
Query: 238 LFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDW 297
F+++ +Q VPN+E + G ++E+G + L +P +I I+ + +A S ISDW
Sbjct: 2 CFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDW 61
Query: 298 NSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTE 357
N LF++VHPGG+ ILD+VE L L KL +R+ +SEYGN+ + V FILD RK S +
Sbjct: 62 NKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQ 121
Query: 358 ERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391
+TTGEGLE GVLFGFGPG+T+ETVVL+S+PI
Sbjct: 122 NGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 155
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 156 bits (396), Expect = 8e-47
Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 12/211 (5%)
Query: 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEI 77
A + + P + + + R ++ R+ E + +R R+ E
Sbjct: 1 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQLP---LALRLIENTGVRTRHIVQPIED 57
Query: 78 LKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD 137
E+P + R+ + E +A+ + + I +I+ + G
Sbjct: 58 TLEHP--------GFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM 109
Query: 138 MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVL 197
MP L+N +G + + ++ I GC GGA I A D P A L+V C+ L
Sbjct: 110 MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL 169
Query: 198 HFHEPTEARLDMLVGQAIFGDGAAAAIIGAD 228
+ PT+ + L+ +FGDG AAA++
Sbjct: 170 CYQ-PTDLGVGSLLCNGLFGDGIAAAVVRGR 199
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 112 bits (282), Expect = 1e-30
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 239 FQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWN 298
++ +P TE+ ++ +K G+ + L K +P + + L + G +
Sbjct: 4 VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEP-LAPALKELAGEHGWDASD 62
Query: 299 SLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEE 358
FYIVH GG ILD + L + SR L+EYGN+ + VL ++ +E
Sbjct: 63 LDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLD----ALRRLFDE 118
Query: 359 RKATTGEGLEYGVLFGFGPGITVETVVLR 387
G G+L GFGPGIT E +
Sbjct: 119 GGVEEG---ARGLLAGFGPGITAEMSLGC 144
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Score = 71.7 bits (175), Expect = 1e-15
Identities = 32/213 (15%), Positives = 56/213 (26%), Gaps = 48/213 (22%)
Query: 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEE 76
+ I I P V ++ + + +
Sbjct: 1 AIGIDKINFYVPKYY------------VDMAKLAEARQVDPNKFLIGIGQTEMAV----- 43
Query: 77 ILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGV 136
+ + +++ +G A + KI +I V
Sbjct: 44 --------------------SPVNQDIVSMG--ANAAKDIITDEDKKKIGMVIVATESAV 81
Query: 137 DMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITV 196
D A ++ L R + CY I+ AKD P +VLV+ D
Sbjct: 82 DAAKAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTAR 141
Query: 197 LHFHEPTEARLDMLVGQAIFGDGAAAAIIGADP 229
+ G+ G GA A +I +P
Sbjct: 142 YGLNSG---------GEPTQGAGAVAMVIAHNP 165
|
| >d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 58.8 bits (141), Expect = 6e-11
Identities = 38/218 (17%), Positives = 59/218 (27%), Gaps = 44/218 (20%)
Query: 13 SRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFY 72
S S +L++G P VTN E + I R+ I+ R F
Sbjct: 8 SGARSVGLLSVGAYRPER------------VVTNDEICQHIDSSDEWIYTRTGIKTRRFA 55
Query: 73 LTEEILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGA 132
+E EA +A+ G + I +I
Sbjct: 56 ADDESAASMAT-------------------------EACRRALSNAGLSAADIDGVIVTT 90
Query: 133 VYGVDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCC 192
++ + + G G + A D+ A +LVV
Sbjct: 91 NTHFLQTPPAAPMVAASLGAKGILGFDLS-AGAAGFGYALGAAADMIRGGGAATMLVVGT 149
Query: 193 DITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPD 230
+ IF DGAAA ++G P
Sbjct: 150 EKLSPTIDMYDRGN------CFIFADGAAAVVVGETPF 181
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Score = 54.5 bits (130), Expect = 2e-09
Identities = 33/217 (15%), Positives = 66/217 (30%), Gaps = 50/217 (23%)
Query: 17 SAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEE 76
KI+ G+ P TN++ + + I R+ IR+R+ E
Sbjct: 2 YTKIIGTGSYLPEQ------------VRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNE 49
Query: 77 ILKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGV 136
+ + +A A + +I ++
Sbjct: 50 TVSTMGFEAATRAI----EMAGI---------------------EKDQIGLIVVATTSAT 84
Query: 137 D-MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDIT 195
P A ++ ++LG++ + + + + A ++ LVV D+
Sbjct: 85 HAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYA--LSVADQYVKSGAVKYALVVGSDVL 142
Query: 196 --VLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPD 230
+ IFGDGA AA++ A +
Sbjct: 143 ARTCDPTDRGTI--------IIFGDGAGAAVLAASEE 171
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Score = 50.3 bits (119), Expect = 4e-08
Identities = 28/215 (13%), Positives = 63/215 (29%), Gaps = 49/215 (22%)
Query: 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEI 77
+ ILA+G P +TN++ + L I R+ I++R +E
Sbjct: 1 SGILALGAYVPER------------VMTNADFEAYLDTSDEWIVTRTGIKERRVAAEDEY 48
Query: 78 LKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD 137
+ + + + + +I
Sbjct: 49 TSDLAFKAVEDLL-------------------------RRHPGALEGVDAVIVATNTPDA 83
Query: 138 MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDIT-- 195
+ L+ + ++ ++ A + E +VL V +
Sbjct: 84 LFPDTAALVQARFGLKAFAYDLLAGCPGWIYALA--QAHALVEAGLAQKVLAVGAEALSK 141
Query: 196 VLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPD 230
++ +++ A +FGDG AA++G +
Sbjct: 142 IIDWNDRATA--------VLFGDGGGAAVVGKVRE 168
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 181 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Score = 48.3 bits (114), Expect = 2e-07
Identities = 36/215 (16%), Positives = 68/215 (31%), Gaps = 48/215 (22%)
Query: 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEI 77
+++L +G+ P V+N E + I R+ IR R
Sbjct: 10 SRVLGVGSYRPRR------------EVSNKEVCTWIDSTEEWIETRTGIRSRR------- 50
Query: 78 LKENPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVD 137
A E + +G A+ +A++ G ++I ++ +
Sbjct: 51 ------------------IAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFV 92
Query: 138 MPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDIT-- 195
+ + + S C + A D E+ VLVV +
Sbjct: 93 HTPPLSVAIAHELGADNAGGFDL-SAACAGFCHALSIAADAVESGGSRHVLVVATERMTD 151
Query: 196 VLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPD 230
V+ + + + +FGDGA AA++G
Sbjct: 152 VIDLADRSLS--------FLFGDGAGAAVVGPSDV 178
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Score = 46.2 bits (109), Expect = 8e-07
Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 279 KYIDKLLADAMSPIGISDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGN 338
+ +A+ G++ + + ++ H I+D + LG+ + + + + GN
Sbjct: 48 ADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVS--RDAEDTGN 105
Query: 339 LGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387
+ SV LD + + ++ GFG G++ L
Sbjct: 106 TSSASVALALDRLVRSGAVPGG-------GPALMIGFGAGLSYAGQALL 147
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 44.3 bits (104), Expect = 4e-06
Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 287 DAMSPIGISDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLF 346
AM G+ ++ H I + + +NL L + + GN A S+
Sbjct: 56 RAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDA--VVANDIEHTGNTSAASIPL 113
Query: 347 ILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387
+ ++ A G+ +L G+G G++ V+R
Sbjct: 114 AMAELL----TTGAAKPGD---LALLIGYGAGLSYAAQVVR 147
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Score = 35.2 bits (80), Expect = 0.004
Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 10/100 (10%)
Query: 288 AMSPIGISDWNSLFYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFI 347
++ + + + H I+ + LG+ + + + +GN A SV
Sbjct: 53 TLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLD---RHGNTSAASVPCA 109
Query: 348 LDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLR 387
LD+ + + + +L FG G T + ++R
Sbjct: 110 LDEAVRDGRIKPG-------QLVLLEAFGGGFTWGSALVR 142
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 395 | |||
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 100.0 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 100.0 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 100.0 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 100.0 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 100.0 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 100.0 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 100.0 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.97 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 99.97 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.96 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 99.96 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 99.95 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.93 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 99.92 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.92 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.92 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.23 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.2 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.16 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.14 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 99.14 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 99.06 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.05 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.88 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.85 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.77 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.56 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.32 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.3 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 97.65 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 97.57 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 96.62 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 96.39 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.39 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 96.07 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 95.66 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 95.65 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 95.52 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 95.46 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 95.25 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 95.15 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 93.16 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 92.26 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 91.86 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 89.44 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 88.71 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 88.24 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 88.23 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 86.84 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 80.14 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.7e-59 Score=458.39 Aligned_cols=364 Identities=24% Similarity=0.387 Sum_probs=302.8
Q ss_pred cCCCCCc---eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCC
Q 016094 11 HRSRGPS---AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCY 87 (395)
Q Consensus 11 ~~~~~~~---v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~ 87 (395)
||+++|. .+|.|+|+|+|+++|+|+|+++.+.+.... +..++++.+|++++||++||++.+... ..+++...
T Consensus 2 ~~~~~~p~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~---~~~~~~~~ri~~~tGI~~R~~~~~~~~--~~~~~~~~ 76 (372)
T d1teda_ 2 QLPPAPPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLD---PGQRERIPRVYQKSRITTRRMAVDPLD--AKFDVFRR 76 (372)
T ss_dssp CCCCCCCCCEEEEEEEEEECCSCEEEHHHHHHHHHTC-------CCTTHHHHHHHTSCCSEEECSSCTTS--TTHHHHTT
T ss_pred CCCCCCCCceEEEEEEEEeCCCeEEcHHHHHHHHHhhcCC---hHHHHHHHHHHHccCCcccceeccccc--cchhhhhh
Confidence 5666643 779999999999999999999987542211 112345678999999999999865321 11222233
Q ss_pred CCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccccc
Q 016094 88 KAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY-SQGCY 166 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i-~~~C~ 166 (395)
..|++.+|+..|.+.+.+|+++|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++... ++++ +.||+
T Consensus 77 ~~~~~~~r~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~-~~~~~~~gC~ 155 (372)
T d1teda_ 77 EPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSIS-RVVVNFMGCA 155 (372)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGG
T ss_pred cCCCHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCcee-EeeccccCcc
Confidence 468899999999999999999999999999999999999999999888889999999999999988764 4555 46999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeecc
Q 016094 167 MGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVSLNERPLFQVLSCSQ 246 (395)
Q Consensus 167 s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~~~~~~~~~l~~~~~ 246 (395)
|++.||++|..+|++|+.++||||++|.++.++.... ++.++...++|||||+|+||++++.........+.+.+..+
T Consensus 156 g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~~~~d--~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~ 233 (372)
T d1teda_ 156 AAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFAD--DINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFS 233 (372)
T ss_dssp HHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGCCCCS--SHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCccceeeeehhhcccccCCC--cchhhhhhhhhcccceeEEeccCCcccccCCceeEEecccc
Confidence 9999999999999999999999999999987554222 24566678899999999999987754210112344444445
Q ss_pred eecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccc
Q 016094 247 MTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEK 325 (395)
Q Consensus 247 ~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek 325 (395)
...|.+.+.+.|...+.++.+..++++++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||++++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~i~Hq~~~~i~~~i~~~Lgl~~ek 312 (372)
T d1teda_ 234 QLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQI-SDIDLWAIHPGGPKIIEQSVRSLGISAEL 312 (372)
T ss_dssp EECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSCEEECCSCHHHHHHHHHHHTCCGGG
T ss_pred cccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCH-HHhhhhhccCccHHHHHHHHHHcCCCHHH
Confidence 56777777777877777777777999999999999999999999999997 999 9999999999999999999999999
Q ss_pred chHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEec
Q 016094 326 LGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 326 ~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
+..+++++++|||++|||+|++|++++++ +++.+|. |++++++||+|++|+++||++.
T Consensus 313 ~~~s~~~l~~~GN~~sasip~~L~~~l~~----g~~~~g~--d~vll~~fG~G~s~~~~ll~~~ 370 (372)
T d1teda_ 313 AAQSWDVLARFGNMLSVSLIFVLETMVQQ----AESAKAI--STGVAFAFGPGVTVEGMLFDII 370 (372)
T ss_dssp GHHHHHHHHHHCBCTHHHHHHHHHHHHHS----CSSSSSS--EEEEEEEEETTTEEEEEEEEEC
T ss_pred hhhhHHHHhccCCcHHHHHHHHHHHHHHh----CCCCCCC--CEEEEEEEcHHHhHHHHhheee
Confidence 98888889999999999999999999998 7776652 8999999999999999999985
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=100.00 E-value=1.8e-39 Score=295.14 Aligned_cols=231 Identities=64% Similarity=1.067 Sum_probs=197.0
Q ss_pred CCCcccCCcccCCCCCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhc
Q 016094 1 MGTVKSNGDVHRSRGPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKE 80 (395)
Q Consensus 1 ~~~~~~~~~~~~~~~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~ 80 (395)
|-||..=.+.||+++| ++|.|+|+|+|+++++|+++.+.++++.+.+..+++.++..|+++++||++||++.+.++.+.
T Consensus 1 ~~~~~~~~~~~r~~~p-a~I~giGt~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~ 79 (235)
T d1bi5a1 1 MVSVSEIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKE 79 (235)
T ss_dssp CCCHHHHHHHHSCCSC-CEEEEEEEECCSCEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHT
T ss_pred CCCHHHHhhccCCCCC-cEEEEEEEECCCcEEeHHHHHHHHHHhhccccchhhhhhhhhhhcccCCceeEEecChHhhcc
Confidence 4555444568999999 999999999999999999999998776665555667778899999999999999998876655
Q ss_pred CCCCcCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee
Q 016094 81 NPNMSCYKAPSLDARHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI 160 (395)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~ 160 (395)
.++...+..|.+++|+..|.+...+|+++|+++||+++|++++|||+||++|++++..|+.+..++++||+.....++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~~~ 159 (235)
T d1bi5a1 80 NPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159 (235)
T ss_dssp CHHHHSSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEE
T ss_pred CcccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEEee
Confidence 55566677899999999999999999999999999999999999999999999996678888899999888665543567
Q ss_pred eccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCC
Q 016094 161 YSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVS 232 (395)
Q Consensus 161 i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~ 232 (395)
++.+|+|++.+|++|.+++++|+.++||||++|.+|.++..+++.+.......++|||||+|+||+.++...
T Consensus 160 ~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S~~~~~~d~~~~~~~v~~~lFGDGA~A~vl~~~p~~~ 231 (235)
T d1bi5a1 160 YQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPE 231 (235)
T ss_dssp ESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTT
T ss_pred ecCccchHHHHHHHHHHHHHcCCCCeEEEEEeeecceecCCCCCCchhhhcceeeeccceEEEEEecCCCCC
Confidence 789999999999999999999999999999999999866433332344555678999999999999887653
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=8.1e-36 Score=264.76 Aligned_cols=198 Identities=23% Similarity=0.381 Sum_probs=170.3
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
.+|.++++|+|+++++|+|+.+.+......+ +.+ ++..++++++||++||++.|.|+. ...|++++|+.
T Consensus 1 a~i~~~a~~~P~~~v~n~e~~e~~~~~~~~~--~~~-~~~~~i~~~tGI~~R~~~~~~e~~--------~~~~~~~~~~~ 69 (200)
T d1u0ma1 1 ATLCRPSVSVPEHVITMEETLELARRRHTDH--PQL-PLALRLIENTGVRTRHIVQPIEDT--------LEHPGFEDRNK 69 (200)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTC--TTH-HHHHHHHHHTCCCEEEESSCHHHH--------TSCCCHHHHHH
T ss_pred CeeccceEECCCeeEcHHHHHHHHHHhCCCc--hhH-HHHHHHHHhCCCCeeeEECChhhh--------ccCCCHHHHHH
Confidence 3689999999999999999999876543321 233 456789999999999999988853 24578999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIY-SQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i-~~~C~s~~~al~~A~ 176 (395)
.+.+...+|+++|+++||+++|++|+|||+||+++++++..|+.+..++++||+++... .+++ +.||+|++.+|++|.
T Consensus 70 ~~~~~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~-~~~i~~~gC~g~~~al~~A~ 148 (200)
T d1u0ma1 70 VYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTR-QIPIAQLGCAAGGAAINRAH 148 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCE-EEEECSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCee-EeccccchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888999999999999987664 5565 689999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGAD 228 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~ 228 (395)
.++++|+.++||||++|.+|..+ ++.+.+........+|||||+|+||+.+
T Consensus 149 ~~l~~~~~~~vLvv~~e~~S~~~-~~~d~~~~~~~~~~lFgDGAaA~ll~~~ 199 (200)
T d1u0ma1 149 DFCTAYPEANALIVACEFCSLCY-QPTDLGVGSLLCNGLFGDGIAAAVVRGR 199 (200)
T ss_dssp HHHHHSTTCEEEEEEEEEGGGGC-CTTCCSHHHHHHHHHBCEEEEEEEEETT
T ss_pred HHHHhCCCCEEEEEEEecccccc-CCCCCChhhhhcccccccccEEEEEecC
Confidence 99999999999999999999755 4555444555577899999999999865
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.2e-35 Score=253.50 Aligned_cols=170 Identities=25% Similarity=0.319 Sum_probs=152.0
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
.+|.|+|+|+|+++++|+|+.+.+ ... .+|+.+++||++||+..+++.
T Consensus 3 a~I~g~g~ylP~~~v~n~el~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~~-------------------- 50 (174)
T d1hnja1 3 TKIIGTGSYLPEQVRTNADLEKMV---DTS---------DEWIVTRTGIRERHIAAPNET-------------------- 50 (174)
T ss_dssp EEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECCTTCC--------------------
T ss_pred cEEEEEEEECCCCcccHHHHHHHh---CCC---------HHHHHhccCcceeeecCCCcc--------------------
Confidence 689999999999999999998764 221 368999999999999876663
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+.+|+++||++++++|++||+||++++++ +..|+.+.+|+++||+++.. +++++++|+|++.||++|.
T Consensus 51 -----~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~~~--~~di~~~C~g~~~al~~A~ 123 (174)
T d1hnja1 51 -----VSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--AFDVAAACAGFTYALSVAD 123 (174)
T ss_dssp -----HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--EEEECCGGGHHHHHHHHHH
T ss_pred -----chHHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCchh--hhhhhhhhccHHHHHHHHH
Confidence 889999999999999999999999999999999 78999999999999998755 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVS 232 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~ 232 (395)
.++++|..++||||++|..|. +.++. ++.+.++|||||+|+||+++++++
T Consensus 124 ~~i~sg~~~~~Lvv~~e~~S~-~~~~~-----d~~~~~lfGDgA~A~vl~~~~~~G 173 (174)
T d1hnja1 124 QYVKSGAVKYALVVGSDVLAR-TCDPT-----DRGTIIIFGDGAGAAVLAASEEPG 173 (174)
T ss_dssp HHHHTTSCSEEEEEEEECHHH-HSCTT-----CHHHHTTBCCEEEEEEEEEESSCS
T ss_pred HHHhcCCcceeEEEeeehhhc-ccCCC-----CCCeEEEeceeeEEEEEEeCCCCC
Confidence 999999999999999999997 55554 344678999999999999987653
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=100.00 E-value=2e-34 Score=251.77 Aligned_cols=173 Identities=21% Similarity=0.270 Sum_probs=153.0
Q ss_pred CCceEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHH
Q 016094 15 GPSAKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDA 94 (395)
Q Consensus 15 ~~~v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
....+|.|+|+|+|+++++|+|+.+.+ ..+ .+|+.+++||++||++.++|+
T Consensus 7 ~~~arI~g~g~ylP~~~v~n~e~~~~~---~~~---------~~~i~~~tGi~~R~~~~~~e~----------------- 57 (181)
T d1mzja1 7 RRFSRVLGVGSYRPRREVSNKEVCTWI---DST---------EEWIETRTGIRSRRIAEPDET----------------- 57 (181)
T ss_dssp CCEEEEEEEEEECCSCEEEHHHHTTTS---SCC---------HHHHHHHHCCSEEECCCTTCC-----------------
T ss_pred CCccEEEEEEEECCCceecHHHHHHHc---CCC---------HHHHHhccCcceehhhccCCc-----------------
Confidence 334899999999999999999998763 222 368999999999999977774
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHH
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIR 173 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~ 173 (395)
..+|+++|+++||+++|++|+|||+||++|+++ +..|+.+..+|++||.++.. +++++++|+|++.||+
T Consensus 58 --------~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~~~~--~~Dv~~~C~g~~~aL~ 127 (181)
T d1mzja1 58 --------IQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG--GFDLSAACAGFCHALS 127 (181)
T ss_dssp --------HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHH
T ss_pred --------HHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCCCcc--ceeHHhhhccHHHHHH
Confidence 899999999999999999999999999999999 78899999999999988765 8999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCCC
Q 016094 174 HAKDIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDVS 232 (395)
Q Consensus 174 ~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~~ 232 (395)
+|..++++|+.++||||++|.++. +.++.+ +.+.++|||||+|+||++++.++
T Consensus 128 ~A~~~i~~~~~~~~LvV~~e~~s~-~~~~~d-----~~~~~lfGDGAaA~ll~~~~~~G 180 (181)
T d1mzja1 128 IAADAVESGGSRHVLVVATERMTD-VIDLAD-----RSLSFLFGDGAGAAVVGPSDVPG 180 (181)
T ss_dssp HHHHHHHHSSCSCEEEEEEEEGGG-GSCSSC-----TTTTTTBCEEEEEEEEEEESSCC
T ss_pred HHhCHhhcCCCceeEEeeeccccc-cCCCCC-----cceEEEeeeeeEEEEEEeCCCCc
Confidence 999999999999999999999997 555543 34678999999999999877543
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6.2e-34 Score=246.59 Aligned_cols=167 Identities=20% Similarity=0.285 Sum_probs=148.6
Q ss_pred EEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHHH
Q 016094 19 KILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHAM 98 (395)
Q Consensus 19 ~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (395)
+|.++|+|+|+++++|+++.+.+ ... .+||.+++||++||++.++++
T Consensus 2 gI~~ig~ylP~~~v~n~~~~~~~---~~~---------~~~i~~~~Gi~~R~~~~~~e~--------------------- 48 (172)
T d1ub7a1 2 GILALGAYVPERVMTNADFEAYL---DTS---------DEWIVTRTGIKERRVAAEDEY--------------------- 48 (172)
T ss_dssp EEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEEECCTTCC---------------------
T ss_pred ceeEEEEECCCceEcHHHHHHHh---CCC---------HHHHHhccCceeeeecccccc---------------------
Confidence 69999999999999999998763 111 368999999999999987774
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 016094 99 LIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 99 ~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ 177 (395)
..+|+.+|+++||+++|++|+|||+||++++++ +..|+.+.+|+++||.+ .. +++++++|+|++.+|++|..
T Consensus 49 ----~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~-~~--~~di~~~C~g~~~al~~a~~ 121 (172)
T d1ub7a1 49 ----TSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLK-AF--AYDLLAGCPGWIYALAQAHA 121 (172)
T ss_dssp ----HHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCC-CE--EEEEECSTTHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccC-cc--ceeehhccccHHHHHHHHhh
Confidence 889999999999999999999999999999999 78999999999999954 44 89999999999999999999
Q ss_pred HHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCCCC
Q 016094 178 IAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADPDV 231 (395)
Q Consensus 178 ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~~~ 231 (395)
++++|..++||||++|.+|. +.++.+ +.+.++|||||+|+||++.+..
T Consensus 122 ~~~~~~~~~~Lvv~~e~~S~-~~~~~d-----~~~~~lfGDgAaA~ll~~~~~~ 169 (172)
T d1ub7a1 122 LVEAGLAQKVLAVGAEALSK-IIDWND-----RATAVLFGDGGGAAVVGKVREG 169 (172)
T ss_dssp HHHTTSCSEEEEEEEECGGG-TSCTTC-----HHHHTTBCCEEEEEEEECCCTT
T ss_pred hhhcCCcceeEEeccccccc-ccCCCC-----cCeEEEecceeEEEEEEEcCCC
Confidence 99999999999999999997 555543 4467899999999999998753
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.97 E-value=8.3e-31 Score=225.73 Aligned_cols=163 Identities=22% Similarity=0.283 Sum_probs=142.8
Q ss_pred eEEEeeeecCCCCcccccchHHHHHhhcCCcchHHHHHHHHHHHHhcCcceeeeeechhhhhcCCCCcCCCCCCHHHHHH
Q 016094 18 AKILAIGTATPPNCFYQADYPDFFFRVTNSEHKIELKEKFRRICERSSIRKRYFYLTEEILKENPNMSCYKAPSLDARHA 97 (395)
Q Consensus 18 v~I~~ig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (395)
|+|.++|+|+|+++++|+|+++.. .. + .+|+.+++||++||++.++|+
T Consensus 2 VgI~~~~~ylP~~~v~~~e~~~~~---g~-~--------~~~i~~~~Gi~~r~~~~~~E~-------------------- 49 (166)
T d1xpma1 2 IGIDKINFYVPKYYVDMAKLAEAR---QV-D--------PNKFLIGIGQTEMAVSPVNQD-------------------- 49 (166)
T ss_dssp EEEEEEEEECCSEEEEHHHHHHHT---TS-C--------HHHHHTTTCCSEEEECCTTCC--------------------
T ss_pred eeEeEEEEECCCeEEcHHHHHHHh---CC-C--------HHHHHHhcCcEEEEeCCCccC--------------------
Confidence 899999999999999999998763 21 1 368999999999999987774
Q ss_pred HHHHhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 016094 98 MLIEEVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAK 176 (395)
Q Consensus 98 ~~~~~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~ 176 (395)
..+|+++|++++|++.+ +++||+||++++++ +..|..+..++++||+++... +++++++|+|++.||++|.
T Consensus 50 -----~~~ma~~Aa~~al~~~~--~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~~-~~dv~~~C~g~~~al~~A~ 121 (166)
T d1xpma1 50 -----IVSMGANAAKDIITDED--KKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFAR-CFEMKEACYAATPAIQLAK 121 (166)
T ss_dssp -----HHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCE-EEEEESTTTTHHHHHHHHH
T ss_pred -----HHHHHHHHHHhhhcccc--CCCCCeEEEeccccccccchhHHHHHHhhccccceE-EeeecccHHHHHHHHHHHh
Confidence 88999999999998874 78999999999999 789999999999999986654 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEecccccccCCCCchhhhhhhhhhhhccccEEEEEecCC
Q 016094 177 DIAENNPGARVLVVCCDITVLHFHEPTEARLDMLVGQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~l~GDGAaA~vL~~~~ 229 (395)
+++++++.+++|||++|..+..+. .. ..++|||||+|+||+++|
T Consensus 122 ~~i~~~~~~~alvV~sd~~~~~~~-~~--------~~~~fGDGA~A~ll~~~P 165 (166)
T d1xpma1 122 DYLATRPNEKVLVIATDTARYGLN-SG--------GEPTQGAGAVAMVIAHNP 165 (166)
T ss_dssp HHHTTCTTCEEEEEEEEEECCCTT-CS--------SGGGCEEEEEEEEEEESC
T ss_pred hHHhcCCCCeEEEEEEceEeccCC-CC--------CCccCCCeeEEEEEecCC
Confidence 999999999999999998775332 11 136799999999999976
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=99.97 E-value=1.3e-29 Score=215.21 Aligned_cols=155 Identities=55% Similarity=0.931 Sum_probs=142.0
Q ss_pred CCCceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHH
Q 016094 235 ERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILD 313 (395)
Q Consensus 235 ~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~ 313 (395)
++|.|++++.++..+|++++.+.|.+.+.|+.+.++++||+++.+.++++++++|+++|++. +|| +|++||+|++|++
T Consensus 3 E~Plfei~~~~~~~iP~s~~~~~~~v~~~G~~~~l~r~Vp~~~~~~v~~~v~~~l~~~gl~~-~di~~~v~Hqgg~~Ild 81 (160)
T d1ee0a2 3 ERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITD-WNSVFWMVHPGGRAILD 81 (160)
T ss_dssp CCCCEEEEEEEEEECTTCGGGEEEEEETTEECCEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSSHHHHH
T ss_pred ccchhhhcccCCeEECCCccccCeeecCCceEEeeCchhHHHHHHHHHHHHHHHHhhccCCc-cccceEeecCCcHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999998 999 9999999999999
Q ss_pred HHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 314 QVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 314 ~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
.++++||++++++..||+++++||||+||++|++|++++++...++..+.|.+.|+++++|||+|++|++++||..+
T Consensus 82 ~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~~~~~~~~~~~g~~~d~~ll~afG~Glt~~~~llr~~~ 158 (160)
T d1ee0a2 82 QVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVR 158 (160)
T ss_dssp HHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHhhhhhcCCCCcCCCcCEEEEEEEChHHHHHHHHHeecc
Confidence 99999999999999999999999999999999999999987444454555544589999999999999999999764
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.96 E-value=1.5e-29 Score=213.51 Aligned_cols=151 Identities=56% Similarity=0.927 Sum_probs=140.1
Q ss_pred eEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHH
Q 016094 239 FQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQ 317 (395)
Q Consensus 239 ~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~ 317 (395)
|+++..++..+|++++.+.|.+++.|+.+.++++||+++.+.++++++++|+++|++. +|+ +|++||+|++|++.+++
T Consensus 2 fei~~~~~~~iP~t~~~m~~~v~d~G~~~~l~r~Vp~~i~~~i~~~~~~~l~~~gl~~-~di~~~v~Hqgg~~Ild~v~~ 80 (154)
T d1bi5a2 2 FEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISD-YNSIFWIAHPGGPAILDQVEQ 80 (154)
T ss_dssp EEEEEEEEEECTTCTTSEECCEETTEECCEECSCHHHHHHHHHHHHHHHHHGGGTCCC-TTSSEEEECCSSHHHHHHHHH
T ss_pred EEEEeCCCeEeCCCcccccccccCCcEEeecccchHHHHHHHHHHHHHHHHHHcCCCc-cccceEeeccccHHHHHHHHH
Confidence 7899998999999999999999999999999999999999999999999999999998 999 99999999999999999
Q ss_pred HcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 318 NLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 318 ~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
+|+++++++..||+++.+||||+||++|++|++++++..+++..+.|.+.|++++++||+|++|++++||+.+
T Consensus 81 ~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~~~~~~~~~~~g~~~~~~~~~aFG~Glt~~~~llr~~~ 153 (154)
T d1bi5a2 81 KLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA 153 (154)
T ss_dssp HHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHHhhhccCCcccCCCcCEEEEEEEchHHhHHHHHHhcCc
Confidence 9999999999999999999999999999999999987544455566655589999999999999999999864
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=99.96 E-value=5.3e-29 Score=210.96 Aligned_cols=152 Identities=47% Similarity=0.808 Sum_probs=139.9
Q ss_pred ceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHH
Q 016094 238 LFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVE 316 (395)
Q Consensus 238 ~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~ 316 (395)
.|+++..++..+|++++.+.|.+.+.|+.+.++++||+++.+.++++++++|++++++. +|+ +|++||+|.+|++.++
T Consensus 2 ~feiv~~~~~~iP~t~~~~~~~~~~~G~~~~l~~~Vp~~v~~~i~~~~~~~l~~~~~~~-~did~~i~Hqgg~~Ild~v~ 80 (156)
T d1u0ua2 2 CFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISD-WNKLFWVVHPGGRAILDRVE 80 (156)
T ss_dssp CEEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSCHHHHHHHH
T ss_pred eEEEEeCCCeEeCCCccccceeeecCcEEEEEcchhHHHHHHHHHHHHHHHHHHcCCCh-hhCceEeecCCcHHHHHHHH
Confidence 58999998999999999999999999999999999999999999999999999999998 999 9999999999999999
Q ss_pred HHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 317 QNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 317 ~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
++||++++++..||+++.+|||++||++|++|+++.++..+++..+.|.+.|+++++|||+|++|++++||..+
T Consensus 81 ~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~~~~~~~~~~~~~~~~~~~~~gfG~Glt~~~~llr~~~ 154 (156)
T d1u0ua2 81 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP 154 (156)
T ss_dssp HHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHHTCSBSBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHHhhhhccCCCcCCCCCEEEEEEECHHHhHHHHHHeeCc
Confidence 99999999999999999999999999999999999887444455454444499999999999999999999865
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.95 E-value=2.2e-28 Score=205.68 Aligned_cols=144 Identities=30% Similarity=0.469 Sum_probs=135.2
Q ss_pred ceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHH
Q 016094 238 LFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVE 316 (395)
Q Consensus 238 ~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~ 316 (395)
.+++...++..+|++++.+.|.+++.|+.+.+.+.++..+ +.+.++++++|+++|+++ +|| +|++||+|.++++.++
T Consensus 3 ~~~l~~~~~~~~P~t~~~~~~~~~~~g~~~~l~~~~p~~i-~~~~~~i~~~l~~~g~~~-~did~~~~Hq~~~~i~~~i~ 80 (148)
T d1u0ma2 3 GVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATM-EPLAPALKELAGEHGWDA-SDLDFYIVHAGGPRILDDLS 80 (148)
T ss_dssp EEEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGH-HHHHHHHHHHHHTTSCCS-SCCSCCEEECSHHHHHHHHH
T ss_pred ceEEEecCCEEccCChhhcceEeecCeEEEEEecccchHH-HHHHHHHHHHHHHhCCCH-HHCCEEEECCCCHHHHHHHH
Confidence 5788888888999999999999999999999988888754 668899999999999998 999 9999999999999999
Q ss_pred HHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 317 QNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 317 ~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
+.||++++|+..+++++++|||++||++|++|++++++ +++++| |+|+++|||+|++|+++++||+.
T Consensus 81 ~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~~~~----~~~~~G---d~ill~gfG~G~s~~~~llrW~~ 147 (148)
T d1u0ma2 81 TFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDE----GGVEEG---ARGLLAGFGPGITAEMSLGCWQT 147 (148)
T ss_dssp HHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHS----CCCCSS---CCCEEEEEETTTEEEEEEEEEEC
T ss_pred HHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHHHHc----CCCCCC---CEEEEEEEchHhEeeEEEEEEcc
Confidence 99999999999888899999999999999999999998 889999 99999999999999999999973
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=3.6e-26 Score=191.13 Aligned_cols=111 Identities=19% Similarity=0.359 Sum_probs=106.2
Q ss_pred EEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchH
Q 016094 267 YTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSV 344 (395)
Q Consensus 267 ~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi 344 (395)
++| |+++|+++++.++++++++|+++|+++ +|| +|++||+|.++++.++++||++++|++.+ +++|||++||++
T Consensus 31 ~~m~G~~vf~~av~~~~~~i~~~L~~~g~~~-~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~---~~~~GN~~sasi 106 (143)
T d1hnja2 31 LTMAGNEVFKVAVTELAHIVDETLAANNLDR-SQLDWLVPHQANLRIISATAKKLGMSMDNVVVT---LDRHGNTSAASV 106 (143)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC---HHHHCBCGGGHH
T ss_pred EEEEChHHhhhhhhhhhHHHHHHHHHhhhcc-cccceEEeccCchHHHHHHHHhCccchhhhhhh---hhhhcccccchH
Confidence 445 789999999999999999999999997 999 99999999999999999999999999875 999999999999
Q ss_pred HHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 345 LFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 345 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
|++|++++++ +++++| |+|++++||+|++|+++++||
T Consensus 107 p~~L~~~~~~----~~~~~G---d~vll~g~G~G~s~g~~llrw 143 (143)
T d1hnja2 107 PCALDEAVRD----GRIKPG---QLVLLEAFGGGFTWGSALVRF 143 (143)
T ss_dssp HHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHh----CCCCCC---CEEEEEEEehhhhhEEEEEEC
Confidence 9999999998 899999 999999999999999999998
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.92 E-value=7.1e-26 Score=191.28 Aligned_cols=115 Identities=18% Similarity=0.265 Sum_probs=107.9
Q ss_pred EEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchH
Q 016094 267 YTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSV 344 (395)
Q Consensus 267 ~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi 344 (395)
++| |++||+++.+.++++++++|+++|++. +|| +|++||+|+++++.++++||+|++|++.. ++++||||+||++
T Consensus 35 ~~m~G~~v~~~av~~vp~~i~~~L~~~gl~~-~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~--~~~~~GNt~Sasi 111 (153)
T d1mzja2 35 LVMDGKRVFRWAVADVVPAAREALEVAGLTV-GDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSR--DAEDTGNTSSASV 111 (153)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHTTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCTTSEECC--THHHHCBCTTHHH
T ss_pred EEEcCHHHHHHHHHHHHHHHHHHHHHhCCCc-ccCCEEEEcCCcHHHHHHHHHHhCCCchhcchh--hhhhcCCcccchH
Confidence 555 789999999999999999999999997 999 99999999999999999999999997643 4899999999999
Q ss_pred HHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 345 LFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 345 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
|++|++++++ +++++| |+|++++||+|++|++++|+|++.
T Consensus 112 p~~L~~~~~~----~~~~~G---d~ill~~fG~G~s~~~~~l~~~~~ 151 (153)
T d1mzja2 112 ALALDRLVRS----GAVPGG---GPALMIGFGAGLSYAGQALLLPDP 151 (153)
T ss_dssp HHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCCC
T ss_pred HHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhhEEEEEecCC
Confidence 9999999998 889999 999999999999999999999864
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.92 E-value=9.1e-26 Score=189.54 Aligned_cols=112 Identities=20% Similarity=0.345 Sum_probs=106.2
Q ss_pred EEe-CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchH
Q 016094 267 YTL-SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSV 344 (395)
Q Consensus 267 ~~~-~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi 344 (395)
++| |++||+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||++++|+..+ ++++|||++|||+
T Consensus 35 ~~m~G~~Vf~~a~~~v~~~i~~~L~~~gl~~-~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~--~~~~~GNt~sasi 111 (148)
T d1u6ea2 35 VRLEGPAVFRWAAFKMGDVGRRAMDAAGVRP-DQIDVFVPHQANSRINELLVKNLQLRPDAVVAN--DIEHTGNTSAASI 111 (148)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCCEEEECCSCHHHHHHHHHHHTCCTTCEECC--THHHHCBCGGGHH
T ss_pred EEeecHHHHHHHHHHHHHHHHHHHHHcCCCc-ccccEEEeccccHHHHHHHHHhcCCCchhhhhh--hHHhhCCCccchH
Confidence 455 789999999999999999999999997 999 99999999999999999999999998764 5999999999999
Q ss_pred HHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEe
Q 016094 345 LFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 345 ~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
|++|++++++ |++++| |++++++||+|++|+++++|+
T Consensus 112 p~~L~~a~~~----g~i~~G---d~vll~gfG~G~s~~a~llrv 148 (148)
T d1u6ea2 112 PLAMAELLTT----GAAKPG---DLALLIGYGAGLSYAAQVVRM 148 (148)
T ss_dssp HHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheEEEEeC
Confidence 9999999999 899999 999999999999999999985
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.92 E-value=1.4e-25 Score=188.80 Aligned_cols=110 Identities=20% Similarity=0.393 Sum_probs=106.2
Q ss_pred CCcchHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHH
Q 016094 270 SKDLPVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFIL 348 (395)
Q Consensus 270 ~~~v~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L 348 (395)
|+++|+++.+.++++|+++|+++|+++ +|| +|++||+|.++++.++++|+++++|++.+ +++|||+++||+|++|
T Consensus 38 G~~vf~~a~~~vp~~i~~~L~~~g~~~-~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~---~~~~Gn~~sasip~~L 113 (149)
T d1ub7a2 38 GREVFKFAVRVMNTATLEAIEKAGLTP-EDIRLFVPHQANLRIIDAARERLGLPWERVAVN---VDRYGNTSTASIPLAL 113 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC---HHHHCBCGGGHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhcccc-ccccEEEeeccchHHHHHHHhhccchhhHHHHH---HHHhcCCcchhHHHHH
Confidence 789999999999999999999999998 999 99999999999999999999999999875 9999999999999999
Q ss_pred HHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEecc
Q 016094 349 DDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIP 390 (395)
Q Consensus 349 ~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~ 390 (395)
++++++ +++++| |+||+++||+|++|+++++||.+
T Consensus 114 ~~~~~~----~~~~~G---d~vll~g~G~G~s~ga~llrw~g 148 (149)
T d1ub7a2 114 KEAVDA----GRIREG---DHVLLVSFGAGLTWAAAVLTWGG 148 (149)
T ss_dssp HHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHHc----CCCCCC---CEEEEEEEchHhhhEEEEEEECC
Confidence 999999 899999 99999999999999999999964
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.23 E-value=2e-11 Score=110.06 Aligned_cols=126 Identities=14% Similarity=0.159 Sum_probs=94.6
Q ss_pred HhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C--------------------------CCCCHHHHHHHHc
Q 016094 101 EEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V--------------------------DMPGADVRLMNLL 149 (395)
Q Consensus 101 ~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~--------------------------~~p~~a~~l~~~L 149 (395)
.....++..|+.+||+++|+++++++ .|+++++.+ . .....+.+|+..+
T Consensus 69 d~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~ 148 (249)
T d1j3na1 69 DRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRY 148 (249)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhc
Confidence 34677899999999999999887764 677776432 0 1124567999999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCC--CCch-----hhhhhhh
Q 016094 150 GLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHE--PTEA-----RLDMLVG 212 (395)
Q Consensus 150 Gl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~--~~~~-----~~~~~~~ 212 (395)
|++.. .+.+..+|+|++.||..|.++|++|.++.+||.++|..... ... ...+ .++....
T Consensus 149 gl~Gp---~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~~d 225 (249)
T d1j3na1 149 GFTGP---SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRD 225 (249)
T ss_dssp TCCSC---BCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCC
T ss_pred CCCCC---ccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCCCC
Confidence 99976 57899999999999999999999999999999999975320 100 0000 0112225
Q ss_pred hhhhccccEEEEEecCC
Q 016094 213 QAIFGDGAAAAIIGADP 229 (395)
Q Consensus 213 ~~l~GDGAaA~vL~~~~ 229 (395)
++++||||+++||++.+
T Consensus 226 G~v~gEGa~~lvLe~~~ 242 (249)
T d1j3na1 226 GFVMGEGAGVLVLEAYE 242 (249)
T ss_dssp CBCBBCEEEEEEEEEHH
T ss_pred CEeeEeEEEEEEEccHH
Confidence 78999999999999854
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.20 E-value=1.1e-10 Score=105.20 Aligned_cols=128 Identities=15% Similarity=0.154 Sum_probs=94.5
Q ss_pred HHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-----------------C--------CC-CHHHHHHH
Q 016094 99 LIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V-----------------D--------MP-GADVRLMN 147 (395)
Q Consensus 99 ~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~-----------------~--------~p-~~a~~l~~ 147 (395)
.......|+..|+++||+++|+++++.+ .+++++... . . .+ ..+.+|+.
T Consensus 68 ~~d~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 147 (250)
T d2gfva1 68 KMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTI 147 (250)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHH
Confidence 3345678999999999999999887765 566665431 0 1 22 34678999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cCCC-Cc-h-----hhhhh
Q 016094 148 LLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FHEP-TE-A-----RLDML 210 (395)
Q Consensus 148 ~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~~~-~~-~-----~~~~~ 210 (395)
.+|+++. .+.+..+|+|++.||..|.++|++|.++.+||+++|..... .... .+ + .++..
T Consensus 148 ~~gl~Gp---~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~ 224 (250)
T d2gfva1 148 MYGLRGP---SISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKE 224 (250)
T ss_dssp HTTCCSC---EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred HhCCCCC---ccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCC
Confidence 9999986 67899999999999999999999999999999999964310 1100 00 0 01122
Q ss_pred hhhhhhccccEEEEEecCC
Q 016094 211 VGQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 211 ~~~~l~GDGAaA~vL~~~~ 229 (395)
..++++|+||+++||++.+
T Consensus 225 rdG~v~gEGaa~lVLE~~~ 243 (250)
T d2gfva1 225 RDGFVLGDGAGMLVLEEYE 243 (250)
T ss_dssp CCSBCBBCEEEEEEEEEHH
T ss_pred CCCEeeeeEEEEEEECcHH
Confidence 3578999999999999754
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.16 E-value=7.5e-11 Score=107.65 Aligned_cols=94 Identities=14% Similarity=0.055 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-V-DMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~-~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
+.+|+..|++.+|+++|+++++||.||++++.+ . .....+..++...|++...+ .+.++..|+|++.||..|.+.|.
T Consensus 24 ~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp-~~tVn~~CaSg~~Ai~~a~~~I~ 102 (273)
T d1ulqa1 24 PDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA-GCTVNRLCGSGLEAVAQAARAIW 102 (273)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE-EEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccc-eEEEecccchHHHHHHHHHHHHh
Confidence 889999999999999999999999999999876 2 34578889999999987665 89999999999999999999999
Q ss_pred cCCCCeEEEEEeccccc
Q 016094 181 NNPGARVLVVCCDITVL 197 (395)
Q Consensus 181 ~g~~~~vLvv~~e~~s~ 197 (395)
+|..+.+|++++|.+|.
T Consensus 103 ~G~~d~~lagG~EsmS~ 119 (273)
T d1ulqa1 103 AGEGKVYIGSGVESMSR 119 (273)
T ss_dssp TTSCSEEEEEEEEESSS
T ss_pred cCCCccceeeeccccch
Confidence 99999999999999985
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.14 E-value=9.8e-11 Score=106.40 Aligned_cols=94 Identities=10% Similarity=0.070 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~ 181 (395)
+.+|+..+++.+|+++|++|++||.|++++..+ ...++.+..++...|++...+ ++.++..|+|++.|+.+|.+.|.+
T Consensus 27 ~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vp-a~tv~~~C~Sg~~Ai~~Aa~~I~~ 105 (268)
T d1m3ka1 27 AHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT-AWGMNQLAGSGLRAVALGMQQIAT 105 (268)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE-EEEEECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCccccc-ceeecccCcccchHHHHHHHHHhC
Confidence 889999999999999999999999999999886 456788999999999997665 889999999999999999999999
Q ss_pred CCCCeEEEEEeccccc
Q 016094 182 NPGARVLVVCCDITVL 197 (395)
Q Consensus 182 g~~~~vLvv~~e~~s~ 197 (395)
|..+.+|++++|.+|.
T Consensus 106 G~~dvvlagG~EsmS~ 121 (268)
T d1m3ka1 106 GDASIIVAGGMESMSM 121 (268)
T ss_dssp TSCSCEEEEEEEESTT
T ss_pred CCceEEeecccccccc
Confidence 9999999999999985
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=99.06 E-value=6.1e-10 Score=99.93 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=95.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC------------------CCC--------C-CHHHH
Q 016094 96 HAMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG------------------VDM--------P-GADVR 144 (395)
Q Consensus 96 ~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~------------------~~~--------p-~~a~~ 144 (395)
...+......++..++.+||+++|++++.+. .+++++... ... + ..+..
T Consensus 65 ~~~~~d~~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 144 (250)
T d1e5ma1 65 EAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGL 144 (250)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHH
T ss_pred hhhhcCcHHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhh
Confidence 3344455678999999999999999876653 566665421 011 1 34678
Q ss_pred HHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccc-cc---------ccCC-----CCch--hh
Q 016094 145 LMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDIT-VL---------HFHE-----PTEA--RL 207 (395)
Q Consensus 145 l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~-s~---------~~~~-----~~~~--~~ 207 (395)
++..+|+... .+.+..+|+|++.||.+|.++|++|.++.+||.++|.. +. .... |... .+
T Consensus 145 is~~~gl~Gp---~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPF 221 (250)
T d1e5ma1 145 TAINLGAKGP---NNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPF 221 (250)
T ss_dssp HHHHHTCCSC---EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTT
T ss_pred HHHhccCCCC---CccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCC
Confidence 8999999986 67899999999999999999999999999999999964 21 0111 1100 01
Q ss_pred hhhhhhhhhccccEEEEEecCC
Q 016094 208 DMLVGQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 208 ~~~~~~~l~GDGAaA~vL~~~~ 229 (395)
+....+++.|+||+++||++.+
T Consensus 222 D~~~dG~~~gEGa~~~vLe~l~ 243 (250)
T d1e5ma1 222 DKDRDGFVMGEGSGILILEELE 243 (250)
T ss_dssp BTTCCSBCBBCEEEEEEEEEHH
T ss_pred CCCCCCEeeEeeEEEEEEeeHH
Confidence 2223588999999999998754
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.05 E-value=2.7e-10 Score=103.08 Aligned_cols=94 Identities=10% Similarity=0.018 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKE-WGQPVSKITHLIFGAVYG--VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~-agi~~~~Id~li~~s~~~--~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll 179 (395)
+.+|+..+++++|++ +|++|++||.||+++..+ ...+..+..++-..|++...+ ++.++..|+|++.|+..|.+.|
T Consensus 30 ~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p~~vp-~~tV~~~C~Sgl~Ai~~aa~~I 108 (262)
T d1wdkc1 30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSA-AQTVSRLCGSSMSALHTAAQAI 108 (262)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSE-EEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhcccccc-hhhccccccHHHHHHHHHHHHH
Confidence 889999999999996 899999999999999876 356788899999999988775 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeccccc
Q 016094 180 ENNPGARVLVVCCDITVL 197 (395)
Q Consensus 180 ~~g~~~~vLvv~~e~~s~ 197 (395)
.+|..+.||++|+|.+|.
T Consensus 109 ~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 109 MTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp HTTSCSEEEEEEEEETTT
T ss_pred HhhcCCceeeeccccccc
Confidence 999999999999999985
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.88 E-value=1.7e-09 Score=98.01 Aligned_cols=94 Identities=11% Similarity=0.016 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHc----CCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEW----GQPVSKITHLIFGAVYG-VDMPGADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~a----gi~~~~Id~li~~s~~~-~~~p~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ 177 (395)
+.+|+..+++++|+++ +++|++||.||+++..+ -..+..+..++-..|++...+ ++.++..|+|++.||..|.+
T Consensus 35 ~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al~aglp~~vp-a~tVnr~CaSg~~Ai~~Aa~ 113 (269)
T d1afwa1 35 TDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTP-FVALNRQCSSGLTAVNDIAN 113 (269)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC-EEEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhhhcccccccc-chhccccchHHHHHHHHHHH
Confidence 8899999999999865 69999999999999876 333466788888899987665 89999999999999999999
Q ss_pred HHHcCCCCeEEEEEeccccc
Q 016094 178 IAENNPGARVLVVCCDITVL 197 (395)
Q Consensus 178 ll~~g~~~~vLvv~~e~~s~ 197 (395)
.|.+|..+.+|++|+|.+|.
T Consensus 114 ~I~~G~~divlagG~EsmS~ 133 (269)
T d1afwa1 114 KIKVGQIDIGLALGVESMTN 133 (269)
T ss_dssp HHHTTSCSEEEEEEEEEHHH
T ss_pred HHhhccccceeeeecccccc
Confidence 99999999999999999985
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.85 E-value=7.7e-09 Score=90.43 Aligned_cols=110 Identities=14% Similarity=0.021 Sum_probs=87.7
Q ss_pred hHHHHHhHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHH---------HHHHHhcCCCCcch
Q 016094 274 PVIIGKYIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGAS---------RYALSEYGNLGAPS 343 (395)
Q Consensus 274 ~~~~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~---------~~~~~~~Gn~~sas 343 (395)
-....+.+..++++..++.|.+. +|+ ++++|++..++.....+.|....++.... ...-+++||+++||
T Consensus 35 ~~~Yl~~l~~~~~~~~~~~g~~~-~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iGN~YTaS 113 (221)
T d1xpma2 35 KDAYIRSFQQSWNEYAKRQGKSL-ADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGS 113 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCh-hhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcCCcchHH
Confidence 34567788889999999999997 999 99999999999888777765433222211 00123689999999
Q ss_pred HHHHHHHHHhhhhhhhcccCCCCCceEEEEEEcccceeeeeeEEeccC
Q 016094 344 VLFILDDVRKKSTEERKATTGEGLEYGVLFGFGPGITVETVVLRSIPI 391 (395)
Q Consensus 344 i~~~L~~~~~~~~~~g~l~~G~~~d~vll~~~G~G~~~~a~llr~~~~ 391 (395)
+++.|..+++. +.+.+| ++|+++++|+|......-+++.+.
T Consensus 114 lyl~L~Sll~~----~~~~~G---~rIglfSYGSG~~ae~fs~~V~~~ 154 (221)
T d1xpma2 114 LYLSLISLLEN----RDLQAG---ETIGLFSYGSGSVGEFYSATLVEG 154 (221)
T ss_dssp HHHHHHHHHHH----SCCCTT---CEEEEEEEETTTEEEEEEEEECTT
T ss_pred HHHHHHhhhcc----ccCCCC---CEEEEEEecCCcceeEEEEEEccc
Confidence 99999999987 667789 999999999999998888888754
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.77 E-value=1.5e-08 Score=88.63 Aligned_cols=99 Identities=15% Similarity=0.211 Sum_probs=78.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC----------------------------C----CC
Q 016094 95 RHAMLIEEVPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG----------------------------V----DM 138 (395)
Q Consensus 95 ~~~~~~~~~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~----------------------------~----~~ 138 (395)
+...+......|+..|+++||+++|+++++++ .++++++.. + ..
T Consensus 63 ~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (216)
T d1tqya1 63 RELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLV 142 (216)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHS
T ss_pred hhhcccCcchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccC
Confidence 44455556788999999999999999987764 355444321 0 01
Q ss_pred C-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccc
Q 016094 139 P-GADVRLMNLLGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITV 196 (395)
Q Consensus 139 p-~~a~~l~~~LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s 196 (395)
| ..+.+++..+|+.+. .+.+..+|++++.||..|..+|++|.++.+||.++|...
T Consensus 143 ~~~~a~~ia~~~g~~Gp---~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l 198 (216)
T d1tqya1 143 PSVMPAEVAWAVGAEGP---VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPI 198 (216)
T ss_dssp TTHHHHHHHHHHTCCSC---EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred chHHHHHHHHhcCcccc---ceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence 2 246889999999976 678999999999999999999999999999999999753
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.56 E-value=1.2e-07 Score=84.63 Aligned_cols=125 Identities=14% Similarity=0.112 Sum_probs=88.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCc-----CEEEEEecCC-C---------------------------CCCCHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKI-----THLIFGAVYG-V---------------------------DMPGADVRLMNL 148 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~I-----d~li~~s~~~-~---------------------------~~p~~a~~l~~~ 148 (395)
....+...++.+|+.++++..+.. -+++.++... . ..-..+.+|+..
T Consensus 70 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 149 (253)
T d2vbaa1 70 DASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATP 149 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTT
T ss_pred hhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccc
Confidence 355688889999999998763221 1455554321 0 012356789999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc----------cC-----CCCch--hhhhhh
Q 016094 149 LGLEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH----------FH-----EPTEA--RLDMLV 211 (395)
Q Consensus 149 LGl~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~----------~~-----~~~~~--~~~~~~ 211 (395)
+|+... ...+..+|+|++.||..|.++|++|.++.+||.++|..... +. +|+.. .++...
T Consensus 150 ~g~~Gp---~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~ 226 (253)
T d2vbaa1 150 FKIHGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHR 226 (253)
T ss_dssp TTCCSC---EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTC
T ss_pred cCcccc---eeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcchhhhHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence 999976 67899999999999999999999999999999999865320 00 11110 012223
Q ss_pred hhhhhccccEEEEEecCC
Q 016094 212 GQAIFGDGAAAAIIGADP 229 (395)
Q Consensus 212 ~~~l~GDGAaA~vL~~~~ 229 (395)
.++++|+||+++||++.+
T Consensus 227 ~G~v~gEGa~~lvLe~le 244 (253)
T d2vbaa1 227 DGFVIAGGGGMVVVEELE 244 (253)
T ss_dssp CSBCBBCEEEEEEEEEHH
T ss_pred CCEeeeeEEEEEEEccHH
Confidence 578999999999999754
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.32 E-value=1.2e-06 Score=75.70 Aligned_cols=89 Identities=13% Similarity=0.029 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------------CCC-CHHHHHHHHcCC
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKIT----HLIFGAVYG-V-------------------------DMP-GADVRLMNLLGL 151 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id----~li~~s~~~-~-------------------------~~p-~~a~~l~~~LGl 151 (395)
...|+..|+.+||+++|+++++++ .+++++..+ . ..+ ..+.+|+..+|+
T Consensus 70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 149 (208)
T d1tqyb1 70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM 149 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence 567999999999999999988775 566666431 0 122 346789999999
Q ss_pred CCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccc
Q 016094 152 EPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDIT 195 (395)
Q Consensus 152 ~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~ 195 (395)
++. .+.+..+|+|++.||..|.++|++| ++.+|+.++|..
T Consensus 150 ~Gp---~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~ 189 (208)
T d1tqyb1 150 RGP---SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSA 189 (208)
T ss_dssp CSS---CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECC
T ss_pred cce---eeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccc
Confidence 986 5789999999999999999999999 899999999964
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.30 E-value=6.7e-07 Score=80.15 Aligned_cols=124 Identities=15% Similarity=0.126 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCC-----cCEEEEEecCC------------------CC--------C-CCHHHHHHHHcC
Q 016094 103 VPKLGKEAALKAIKEWGQPVSK-----ITHLIFGAVYG------------------VD--------M-PGADVRLMNLLG 150 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~-----Id~li~~s~~~------------------~~--------~-p~~a~~l~~~LG 150 (395)
....+..|..+|+.+++....+ ...+....... .. . -..+.+|+..+|
T Consensus 88 ~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 167 (270)
T d2ix4a1 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (270)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHhC
Confidence 4566778888999988765433 12333333211 01 1 135689999999
Q ss_pred CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecccccc-----------cC-----CCCch--hhhhhhh
Q 016094 151 LEPSVNRLMIYSQGCYMGGAVIRHAKDIAENNPGARVLVVCCDITVLH-----------FH-----EPTEA--RLDMLVG 212 (395)
Q Consensus 151 l~~~~~~~~~i~~~C~s~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~-----------~~-----~~~~~--~~~~~~~ 212 (395)
+++. .+.+..+|+|++.||..|..+|++|.++.+||.++|..... +. +|... .++....
T Consensus 168 l~Gp---~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rPFD~~a~ 244 (270)
T d2ix4a1 168 FQGP---NHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRD 244 (270)
T ss_dssp CCSC---EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTCC
T ss_pred CCCC---CcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCCCCCCCC
Confidence 9986 57899999999999999999999999999999999875320 10 01111 1122235
Q ss_pred hhhhccccEEEEEecCC
Q 016094 213 QAIFGDGAAAAIIGADP 229 (395)
Q Consensus 213 ~~l~GDGAaA~vL~~~~ 229 (395)
++++|+||+++||++.+
T Consensus 245 G~v~gEGaa~~vLe~l~ 261 (270)
T d2ix4a1 245 GFVIGEGSGVIVLEEYE 261 (270)
T ss_dssp SBCBBCEEEEEEEEEHH
T ss_pred CEeeEeeEEEEEEeeHH
Confidence 89999999999999854
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.65 E-value=4.1e-05 Score=65.66 Aligned_cols=156 Identities=15% Similarity=0.127 Sum_probs=96.1
Q ss_pred hhhhhccccEEEEEecCCCC-CCCCCCceEEEeecceecCCCCCceeeeEecCceeEEe-CCcchHHHHHhHHHHHHHhh
Q 016094 212 GQAIFGDGAAAAIIGADPDV-SLNERPLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTL-SKDLPVIIGKYIDKLLADAM 289 (395)
Q Consensus 212 ~~~l~GDGAaA~vL~~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L 289 (395)
.+++.|||++++||++.... ..|......+.+.+... ++..... .+. .....++++++|
T Consensus 15 dG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~--------------dg~~~~~~~~~-----~~~~~~~~~~al 75 (205)
T d1tqya2 15 DGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRC--------------NAYHMTGLKAD-----GREMAETIRVAL 75 (205)
T ss_dssp CCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CSSCSSCCCTT-----CHHHHHHHHHHH
T ss_pred CCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccc--------------cccccCccccc-----ccccchhhhhHH
Confidence 58999999999999975421 00112344555433211 1100000 011 123456788999
Q ss_pred cccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC
Q 016094 290 SPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT 363 (395)
Q Consensus 290 ~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~ 363 (395)
+++++++ +|| ++-.|..+.+.-+. +.+.++-....++.+ .+-..+||+.+|+-++.|..++.. .++|.+.+
T Consensus 76 ~~a~i~~-~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~~~-l~~g~ipp 152 (205)
T d1tqya2 76 DESRTDA-TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS-SIKSMVGHSLGAIGSLEIAACVLA-LEHGVVPP 152 (205)
T ss_dssp HHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEE-CTHHHHCBCTTTHHHHHHHHHHHH-HHHCEECC
T ss_pred hhhcCCc-cceeeeeccccccccCchhHHHHHHHhhccccCCceee-eecccccccccccchhHHHHHHHH-HhCCeEcc
Confidence 9999997 999 99999999888654 445554322222221 146789999999988877766543 11244432
Q ss_pred CC---------------------CCceEEEEEEcccceeeeeeEEec
Q 016094 364 GE---------------------GLEYGVLFGFGPGITVETVVLRSI 389 (395)
Q Consensus 364 G~---------------------~~d~vll~~~G~G~~~~a~llr~~ 389 (395)
-. +..+++..+||-|.+.++++|+-.
T Consensus 153 ~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~~ 199 (205)
T d1tqya2 153 TANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRDA 199 (205)
T ss_dssp BTTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEECH
T ss_pred cCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEeeC
Confidence 10 014788999999988889998853
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.57 E-value=0.00052 Score=57.94 Aligned_cols=151 Identities=12% Similarity=0.125 Sum_probs=92.6
Q ss_pred hhhhhccccEEEEEecCCCCC-CCCC-CceEEEeecceecCCCCCceeeeEecCceeEEeCCcchHHHHHhHHHHHHHhh
Q 016094 212 GQAIFGDGAAAAIIGADPDVS-LNER-PLFQVLSCSQMTVPNTENNVVGHLKEMGWDYTLSKDLPVIIGKYIDKLLADAM 289 (395)
Q Consensus 212 ~~~l~GDGAaA~vL~~~~~~~-~~~~-~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 289 (395)
.++++|||++++||++..... .|.. ...++.+.+....+.... .. ...+.++|+++|
T Consensus 14 ~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~---------------~~------~~g~~~~i~~aL 72 (194)
T d1tqyb2 14 AGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS---------------GR------PAGLERAIRLAL 72 (194)
T ss_dssp CCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC---------------CC------CCSHHHHHHHHH
T ss_pred CCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc---------------cc------hhhhhhhhhhhc
Confidence 589999999999998743210 0011 123444433221111100 00 012346788999
Q ss_pred cccCCCCCCce-EEEEcCCChHHHHHH-----HHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhcccC
Q 016094 290 SPIGISDWNSL-FYIVHPGGKVILDQV-----EQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERKATT 363 (395)
Q Consensus 290 ~~~g~~~~~di-~~i~H~~~~~~~~~i-----~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~l~~ 363 (395)
+++++++ +|| ++-.|-.+.+..|.+ .+.++-. .++.+ .+-..+||+.+|+-++.|...+.. ..+|.+.|
T Consensus 73 ~~a~i~~-~di~~v~ahgtGt~~~D~~E~~al~~~f~~~--~~~v~-s~K~~~GH~~~AsG~~~li~~~~~-l~~g~ipp 147 (194)
T d1tqyb2 73 NDAGTGP-EDVDVVFADGAGVPELDAAEARAIGRVFGRE--GVPVT-VPKTTTGRLYSGGGPLDVVTALMS-LREGVIAP 147 (194)
T ss_dssp HHHTCCG-GGCCEEECCCCCSHHHHHHHHHHHHHHHCTT--CSEEE-CGGGGTCBCGGGHHHHHHHHHHHH-HHHTSBCC
T ss_pred ccccccc-cceeeeeccccCcccccHHHhhhhhhhhhcc--ccccc-cccccccccccccccceehhhhhh-hhhceecc
Confidence 9999997 999 999999998886654 4556532 22221 135689999999977776655542 11144432
Q ss_pred C---------------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 364 G---------------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 364 G---------------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
- ...++++..+||.|.+.++++|+.
T Consensus 148 ~~~~~~~~~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~ 193 (194)
T d1tqyb2 148 TAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR 193 (194)
T ss_dssp BCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred ccCCCCCCcccCccccCCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence 0 002578999999999998998874
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.62 E-value=0.0036 Score=50.12 Aligned_cols=85 Identities=12% Similarity=0.050 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee-----eccccchHHHHHHHHH
Q 016094 102 EVPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI-----YSQGCYMGGAVIRHAK 176 (395)
Q Consensus 102 ~~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~-----i~~~C~s~~~al~~A~ 176 (395)
.+.....++++++|+++|++++|||.+++.. ..+..-..++++||++.... ... -+.++++-..+|..|.
T Consensus 45 ~a~~~v~~~i~~~L~~~gl~~~dId~~i~Hq----a~~~i~~~v~~~lgl~~ek~-~~~~~~~~GNt~sasip~~L~~a~ 119 (148)
T d1u6ea2 45 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQ----ANSRINELLVKNLQLRPDAV-VANDIEHTGNTSAASIPLAMAELL 119 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECC----SCHHHHHHHHHHHTCCTTCE-ECCTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccEEEecc----ccHHHHHHHHHhcCCCchhh-hhhhHHhhCCCccchHHHHHHHHH
Confidence 3556668899999999999999999998654 23345678999999976532 221 2223444445555544
Q ss_pred HHHHcCCCCeEEEEE
Q 016094 177 DIAENNPGARVLVVC 191 (395)
Q Consensus 177 ~ll~~g~~~~vLvv~ 191 (395)
+.=.-.+.+++|+++
T Consensus 120 ~~g~i~~Gd~vll~g 134 (148)
T d1u6ea2 120 TTGAAKPGDLALLIG 134 (148)
T ss_dssp HHTSSCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 432222347888776
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.39 E-value=0.0072 Score=46.53 Aligned_cols=95 Identities=9% Similarity=0.139 Sum_probs=69.6
Q ss_pred HHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhhhhhhhc
Q 016094 282 DKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKKSTEERK 360 (395)
Q Consensus 282 ~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~~~~~g~ 360 (395)
..+++++|+++|++. +|| +|=+|-+.....-...+.|+++.+|+..+ -=.=-+||-..||=...+.+++.+
T Consensus 27 v~Ai~klL~r~gl~~-~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~-GGaiAlGHP~GaSGarlv~~l~~~------ 98 (124)
T d1afwa2 27 AYAIPKVLEATGLQV-QDIDIFEINEAFAAQALYCIHKLGIDLNKVNPR-GGAIALGHPLGCTGARQVATILRE------ 98 (124)
T ss_dssp HHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTT-CCHHHHCBCTTTHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHcCCCc-ccCcEEEeccchhHHHHHHHHHcCCChhhcccc-CccceecCCcCCchHHHHHHHHHH------
Confidence 467889999999998 999 99999988877778899999999998652 112358999999988888888776
Q ss_pred ccCCCCCceEEEEE-EcccceeeeeeEEe
Q 016094 361 ATTGEGLEYGVLFG-FGPGITVETVVLRS 388 (395)
Q Consensus 361 l~~G~~~d~vll~~-~G~G~~~~a~llr~ 388 (395)
++.+ .+.+..- .|.|.. .+++++.
T Consensus 99 L~~~---~~glas~C~ggG~G-~a~~ier 123 (124)
T d1afwa2 99 LKKD---QIGVVSMCIGTGMG-AAAIFIK 123 (124)
T ss_dssp SCTT---CEEEEEEEETTTEE-EEEEEEE
T ss_pred hccC---CEEEEEEcccCCcE-EEEEEEe
Confidence 5555 4544333 344443 3555553
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.39 E-value=0.0042 Score=49.76 Aligned_cols=86 Identities=17% Similarity=0.081 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-eee--ccccchHHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRL-MIY--SQGCYMGGAVIRHAKDIA 179 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~-~~i--~~~C~s~~~al~~A~~ll 179 (395)
+.....++++++|+++|++++|||.+|... ..+.....++++||++...... ..- +.+.++-..+|..+..--
T Consensus 45 a~~~vp~~i~~~L~~~g~~~~dId~~i~Hq----a~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~ 120 (149)
T d1ub7a2 45 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQ----ANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAG 120 (149)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC----SCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccccccccEEEeec----cchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcC
Confidence 445567889999999999999999998654 3345567889999997654211 111 222233333333333321
Q ss_pred HcCCCCeEEEEEe
Q 016094 180 ENNPGARVLVVCC 192 (395)
Q Consensus 180 ~~g~~~~vLvv~~ 192 (395)
.-.+.++||+++.
T Consensus 121 ~~~~Gd~vll~g~ 133 (149)
T d1ub7a2 121 RIREGDHVLLVSF 133 (149)
T ss_dssp SSCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEE
Confidence 1234588888774
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=96.07 E-value=0.0071 Score=49.04 Aligned_cols=106 Identities=18% Similarity=0.088 Sum_probs=72.3
Q ss_pred hHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHH-----HHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHh
Q 016094 280 YIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQV-----EQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRK 353 (395)
Q Consensus 280 ~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i-----~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~ 353 (395)
...++++++|+++++++ ++| ++-.|-.+.+.-|.+ .+.++-....+..+ .+-..+||+.+|+-.+.|...+.
T Consensus 27 ~~~~~i~~Al~~a~i~~-~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v~-s~K~~~GH~~~AsG~~~l~~~l~ 104 (161)
T d1e5ma2 27 GATRAIAWALKDSGLKP-EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVS-STKSMTGHLLGGSGGIEAVATVM 104 (161)
T ss_dssp HHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCh-hhcceEEEeccCCcccchHHhhhhhhccccCCCcceEE-ecccccccccccchhhHHHHhHH
Confidence 45678999999999997 999 999999998876654 45554222222221 14578999999998888876655
Q ss_pred hhhhhhcccCCC---------------------CCceEEEEEEcccceeeeeeEEe
Q 016094 354 KSTEERKATTGE---------------------GLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 354 ~~~~~g~l~~G~---------------------~~d~vll~~~G~G~~~~a~llr~ 388 (395)
. .++|.+.|-- ..++++.-+||-|.+-++++|+.
T Consensus 105 ~-~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 159 (161)
T d1e5ma2 105 A-IAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK 159 (161)
T ss_dssp H-HHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred h-cccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEee
Confidence 3 1124443210 01467899999988888888863
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=95.66 E-value=0.018 Score=45.49 Aligned_cols=85 Identities=11% Similarity=-0.025 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMI----YSQGCYMGGAVIRHAKDI 178 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~----i~~~C~s~~~al~~A~~l 178 (395)
+.....++++++|+++|++++|||.+|.... .......++++||++.... ... -+.++++-..+|..+.+-
T Consensus 42 av~~~~~~i~~~L~~~g~~~~dId~~i~Hq~----~~~~~~~~~~~l~l~~~k~-~~~~~~~GN~~sasip~~L~~~~~~ 116 (143)
T d1hnja2 42 AVTELAHIVDETLAANNLDRSQLDWLVPHQA----NLRIISATAKKLGMSMDNV-VVTLDRHGNTSAASVPCALDEAVRD 116 (143)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEECCS----CHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHHHT
T ss_pred hhhhhhHHHHHHHHHhhhcccccceEEeccC----chHHHHHHHHhCccchhhh-hhhhhhhcccccchHHHHHHHHHHh
Confidence 4455677899999999999999999986442 2235578899999987542 211 233444555555554442
Q ss_pred HHcCCCCeEEEEEe
Q 016094 179 AENNPGARVLVVCC 192 (395)
Q Consensus 179 l~~g~~~~vLvv~~ 192 (395)
=.-.+.+++|+++.
T Consensus 117 ~~~~~Gd~vll~g~ 130 (143)
T d1hnja2 117 GRIKPGQLVLLEAF 130 (143)
T ss_dssp TCSCTTCEEEEEEE
T ss_pred CCCCCCCEEEEEEE
Confidence 11224588888773
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=95.65 E-value=0.0081 Score=48.58 Aligned_cols=106 Identities=14% Similarity=0.113 Sum_probs=72.5
Q ss_pred hHHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHH-----HHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHh
Q 016094 280 YIDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQV-----EQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRK 353 (395)
Q Consensus 280 ~~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i-----~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~ 353 (395)
....+++++|+++|+++ ++| ++-.|-.+.+.-|.+ .+.++-...++..+ ..-..+||+.+|+-.+.|...+.
T Consensus 27 ~~~~~~~~al~~agi~p-~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~-s~K~~~GH~~~asG~~~li~~~~ 104 (159)
T d1j3na2 27 GAALAMARALKDAGIAP-EQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVS-STKSMIGHLLGAAGAVEAIATVQ 104 (159)
T ss_dssp HHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHhhccHhhcCCCH-HHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceEe-cccccccccccccccchhhhhhh
Confidence 34578889999999997 999 999999998876644 34442211121111 14678999999998888776554
Q ss_pred hhhhhhcccCC--------------------CCCceEEEEEEcccceeeeeeEEe
Q 016094 354 KSTEERKATTG--------------------EGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 354 ~~~~~g~l~~G--------------------~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
. .+++.+.+- .+..++++-+||-|.+-++++|+.
T Consensus 105 ~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 105 A-LYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp H-HHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred H-hhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 3 112444321 012578999999999999999985
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=95.52 E-value=0.026 Score=45.11 Aligned_cols=85 Identities=15% Similarity=0.055 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccchHHHHHHHHHHHHHc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLMIYS-QGCYMGGAVIRHAKDIAEN 181 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~~i~-~~C~s~~~al~~A~~ll~~ 181 (395)
+.....++++++|+++|++++|||.+++.. ..+..-..++++||++........+. .|..++..-.-.-..+++.
T Consensus 46 av~~vp~~i~~~L~~~gl~~~dId~~i~Hq----~~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~~~~~ 121 (153)
T d1mzja2 46 AVADVVPAAREALEVAGLTVGDLVAFVPHQ----ANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLVRS 121 (153)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECC----SCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCEEEEcC----CcHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHHHHHc
Confidence 556667789999999999999999998644 23455678999999976542011121 2332222221222334444
Q ss_pred C---CCCeEEEEE
Q 016094 182 N---PGARVLVVC 191 (395)
Q Consensus 182 g---~~~~vLvv~ 191 (395)
+ +.+++|+++
T Consensus 122 ~~~~~Gd~ill~~ 134 (153)
T d1mzja2 122 GAVPGGGPALMIG 134 (153)
T ss_dssp TSSCTTCEEEEEE
T ss_pred CCCCCCCEEEEEE
Confidence 3 347888776
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=95.46 E-value=0.035 Score=42.49 Aligned_cols=71 Identities=14% Similarity=0.025 Sum_probs=53.8
Q ss_pred HHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 282 DKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 282 ~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
..+++++|+++|++. +|+ .|=+|-+.....-.+.+.|+++++|+..+ -=.=-+||-..||=-..+.+++.+
T Consensus 25 v~A~~~lL~r~gl~~-~Did~~EinEAFA~q~la~~~~l~id~~kvN~~-GGaiAlGHP~GaSGarl~~tl~~~ 96 (124)
T d1m3ka2 25 IPASRKALERAGWKI-GDLDLVEANEAFAAQACAVNKDLGWDPSIVNVN-GGAIAIGHPIGASGARILNTLLFE 96 (124)
T ss_dssp HHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTT-CCHHHHCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCh-hcccHHHhcccchhheeeehHhhCCChhhcCCC-CCccccccCcCccchhHHHHHHHH
Confidence 357889999999997 999 99999988777778899999999998762 011247998888855444444443
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=95.25 E-value=0.021 Score=46.07 Aligned_cols=105 Identities=18% Similarity=0.186 Sum_probs=71.7
Q ss_pred HHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 281 IDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 281 ~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
...+++++|+++++++ +|| ++-.|-.+.++-|. +.+.++-....++.+ .+-..+||+-+|+-.+.|...+..
T Consensus 28 ~~~~~~~al~~a~i~p-~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~-s~Ks~~GH~~~AsG~~~li~~ll~ 105 (161)
T d2gfva2 28 AALAMANALRDAGIEA-SQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTGHLLGAAGAVESIYSILA 105 (161)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEEE-CTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhHhhcccCc-ceEEEEEeecccCcccHHHHHHHHHHHhccccccceec-cccccccccHHHHHHHHHHHHHHH
Confidence 4467889999999997 999 99999999888664 445555322222221 146789999999988777765543
Q ss_pred hhhhhcccC----------------------CCCCceEEEEEEcccceeeeeeEEe
Q 016094 355 STEERKATT----------------------GEGLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 355 ~~~~g~l~~----------------------G~~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.+++.+.+ ..+..+.++-+||-|.+-++++|+.
T Consensus 106 -l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 106 -LRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp -HHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred -hcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 11244432 0012457778899999988999874
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.15 E-value=0.035 Score=44.53 Aligned_cols=102 Identities=15% Similarity=0.088 Sum_probs=70.4
Q ss_pred HHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 281 IDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 281 ~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
..++++++|+++++++ +|| ++-.|-.+.+.-|. +.+.+|-+. .+ .+ +-..+||+.+|+-.+.|...+..
T Consensus 28 ~~~~~~~al~~a~l~p-~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~~~-~v-~s--~Ks~iGH~~~asG~~~l~~~l~~ 102 (158)
T d1ox0a2 28 AIKAIKLALEEAEISP-EQVAYVNAHGTSTPANEKGESGAIVAVLGKEV-PV-SS--TKSFTGHLLGAAGAVEAIVTIEA 102 (158)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCCEECCCCSCHHHHHHHHHHHHHHHCSSS-EE-EC--THHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhhccccccc-eeeeEEeeeccccccchhHHHHHHHHhcCCcc-cC-cC--cccccccchhhhhhhhhcccccc
Confidence 4568899999999997 999 99999999877554 456666221 12 22 46789999999887777655543
Q ss_pred hhhhhcccCCC---------------------CCceEEEEEEcccceeeeeeEEe
Q 016094 355 STEERKATTGE---------------------GLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 355 ~~~~g~l~~G~---------------------~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.+++.+.+-- ...+++.-+||-|.+-++++||.
T Consensus 103 -l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 156 (158)
T d1ox0a2 103 -MRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 156 (158)
T ss_dssp -HHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred -cccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEe
Confidence 1124443210 01467888899888888888874
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=93.16 E-value=0.22 Score=37.89 Aligned_cols=71 Identities=15% Similarity=0.088 Sum_probs=49.9
Q ss_pred HHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHH--cCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 282 DKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQN--LGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 282 ~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~--lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
..+++++|+++|++. +|| .|=.|-+.....-.+.+. |+++.+|+..+ -=.=-+||-..||=-..+.+++.+
T Consensus 24 ~~A~~~~L~r~gl~~-~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~-GGaIAlGHP~GASGari~~tl~~~ 97 (125)
T d1ulqa2 24 VPATRKALERAGLSF-SDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPN-GGAIALGHPLGASGARILTTLVHE 97 (125)
T ss_dssp HHHHHHHHHHTTCCG-GGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHhhccCcCc-cccchheeccccchhHHHHHHHhhccCchhhcCCC-CCcccccCCccccchhHHHHHHHH
Confidence 357889999999997 999 888888766544455555 67788887652 012348998888766555555544
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=92.26 E-value=0.25 Score=39.31 Aligned_cols=104 Identities=15% Similarity=0.062 Sum_probs=68.9
Q ss_pred HHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCc--ccc-hHHHHHHHhcCCCCcchHHHHHHHH
Q 016094 281 IDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGK--EKL-GASRYALSEYGNLGAPSVLFILDDV 351 (395)
Q Consensus 281 ~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~--ek~-~~~~~~~~~~Gn~~sasi~~~L~~~ 351 (395)
...+++++|+++++++ +|| ++-.|..+.+.-|. +.+.++-.. ..+ ..+ +-..+||+-+|+-.+.|...
T Consensus 26 ~~~~~~~al~~a~~~~-~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i~s--~K~~~GH~~~AsG~~~li~~ 102 (161)
T d2ix4a2 26 AVLAMTRALRQSGLCP-NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSS--TKGATGHLLGAAGAVEAIFS 102 (161)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEEC--THHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCc-cccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceeeec--cccccCCccchHHHHHHHHH
Confidence 3457889999999997 999 99999999887664 344554211 111 112 45689999999988887654
Q ss_pred HhhhhhhhcccCCC----------------------CCceEEEEEEcccceeeeeeEEe
Q 016094 352 RKKSTEERKATTGE----------------------GLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 352 ~~~~~~~g~l~~G~----------------------~~d~vll~~~G~G~~~~a~llr~ 388 (395)
+.. ++++.+.+-. ..++++.-+||-|.+-++++|+.
T Consensus 103 ~l~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 103 ILA-IHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp HHH-HHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred HHH-HhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 442 1114433210 01457777999998888888874
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=91.86 E-value=0.081 Score=41.78 Aligned_cols=46 Identities=22% Similarity=0.135 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcc
Q 016094 106 LGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSV 155 (395)
Q Consensus 106 la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~ 155 (395)
-...+++++|+++|++++|||.+++... ....-..++++||+++..
T Consensus 44 ~~~~~i~~~l~~~g~~~~did~~~~Hq~----~~~i~~~i~~~Lgl~~~k 89 (148)
T d1u0ma2 44 PLAPALKELAGEHGWDASDLDFYIVHAG----GPRILDDLSTFLEVDPHA 89 (148)
T ss_dssp HHHHHHHHHHHTTSCCSSCCSCCEEECS----HHHHHHHHHHHSCSCGGG
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEECCC----CHHHHHHHHHHhCCChhh
Confidence 3567889999999999999998886542 223456789999998764
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=89.44 E-value=1.5 Score=34.18 Aligned_cols=100 Identities=17% Similarity=0.088 Sum_probs=67.1
Q ss_pred HHHHHHHhhcccCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 281 IDKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQ-----VEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 281 ~~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~-----i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
..++++++|+.+ + .+| ++-.|-.+.++-|. +.+.+|-..-.+.. +-..+||+-+|+-.+.|...+..
T Consensus 24 ~~~~~~~al~~a---~-~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~~~~v~s---~K~~~GH~~~asG~~~l~~~~~~ 96 (151)
T d2vbaa2 24 AVRCMKMAMHGV---D-TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISA---TKAMTGHSLGAAGVQEAIYSLLM 96 (151)
T ss_dssp HHHHHHHHHTTC---C-SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEEC---THHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcC---c-ccceeEEEeccCCccccHHHHHHHHHHhCCCCccccc---chhhccccccchhhhhhhHHHHH
Confidence 346777788765 3 678 99999999887664 56677633222322 46789999999888887766553
Q ss_pred hhhhhcccCCC---------------------CCceEEEEEEcccceeeeeeEEe
Q 016094 355 STEERKATTGE---------------------GLEYGVLFGFGPGITVETVVLRS 388 (395)
Q Consensus 355 ~~~~g~l~~G~---------------------~~d~vll~~~G~G~~~~a~llr~ 388 (395)
.+++.+.|-. ..+.++.-+||-|.+-++++||.
T Consensus 97 -l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 97 -LEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp -HHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred -HHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 1123333210 01467888999999999999985
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=88.71 E-value=0.69 Score=37.98 Aligned_cols=86 Identities=7% Similarity=0.065 Sum_probs=57.3
Q ss_pred HHHhHHHHHHHhhcccCCCCCCce-EEEEcCCC----hHHHHHHHHHcCCCcccchHHHHHHHhcCCCCcchHHHHHHHH
Q 016094 277 IGKYIDKLLADAMSPIGISDWNSL-FYIVHPGG----KVILDQVEQNLGLGKEKLGASRYALSEYGNLGAPSVLFILDDV 351 (395)
Q Consensus 277 ~~~~~~~~i~~~L~~~g~~~~~di-~~i~H~~~----~~~~~~i~~~lgi~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~ 351 (395)
..+...++++++|+++|+++ +|| .+|+.... ...--.+.++||++++-... ...|+++++.+..|..+
T Consensus 75 a~~la~~Aa~~aL~~ag~~~-~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~------~i~~~gC~g~~~al~~A 147 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLA-TDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQI------PIAQLGCAAGGAAINRA 147 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEE------EECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCh-hhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEe------ccccchhhHHHHHHHHH
Confidence 34455678999999999997 999 76654322 23445678999998754332 24678888888888766
Q ss_pred HhhhhhhhcccCCCCCceEEEEEEc
Q 016094 352 RKKSTEERKATTGEGLEYGVLFGFG 376 (395)
Q Consensus 352 ~~~~~~~g~l~~G~~~d~vll~~~G 376 (395)
..- ++.|. ..+||+++.-
T Consensus 148 ~~~------l~~~~-~~~vLvv~~e 165 (200)
T d1u0ma1 148 HDF------CTAYP-EANALIVACE 165 (200)
T ss_dssp HHH------HHHST-TCEEEEEEEE
T ss_pred HHH------HHhCC-CCEEEEEEEe
Confidence 553 22221 1678888753
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=88.24 E-value=0.53 Score=35.81 Aligned_cols=71 Identities=14% Similarity=0.013 Sum_probs=47.8
Q ss_pred HHHHHHhhcccCCCCCCce-EEEEcCCChHHHHHHHHHcCC---CcccchHHHHHHHhcCCCCcchHHHHHHHHHhh
Q 016094 282 DKLLADAMSPIGISDWNSL-FYIVHPGGKVILDQVEQNLGL---GKEKLGASRYALSEYGNLGAPSVLFILDDVRKK 354 (395)
Q Consensus 282 ~~~i~~~L~~~g~~~~~di-~~i~H~~~~~~~~~i~~~lgi---~~ek~~~~~~~~~~~Gn~~sasi~~~L~~~~~~ 354 (395)
..+++++|+++|++. +|+ +|=.|-+.....-.+.+.+++ +.||+..+ -=.=-+||-..||=...+-+++.+
T Consensus 26 ~~A~~klL~ragl~~-~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~-GGaiAlGHP~GASGaRlv~~l~~~ 100 (128)
T d1wdkc2 26 VPATQKALKRAGLNM-ADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLH-GGAIALGHPFGCSGARISGTLLNV 100 (128)
T ss_dssp HHHHHHHHHHHTCCG-GGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCccc-cccceEEeecccchhhhhhhhhcccccCCcceecCC-CCcccccccccccchhHHHHHHHH
Confidence 356889999999997 999 898898876655556666554 34555441 001247898888766555555554
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=88.23 E-value=0.28 Score=44.50 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcc
Q 016094 103 VPKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSV 155 (395)
Q Consensus 103 ~~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~ 155 (395)
......++++++|+++|++++|||.+++.. ..+..-..++++||++...
T Consensus 264 ~~~~~~~~i~~~L~~~gl~~~did~~i~Hq----~~~~i~~~i~~~Lgl~~ek 312 (372)
T d1teda_ 264 IFSGVAPVVTEMLWDNGLQISDIDLWAIHP----GGPKIIEQSVRSLGISAEL 312 (372)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEECC----SCHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHhcCCCHHHhhhhhccC----ccHHHHHHHHHHcCCCHHH
Confidence 456678889999999999999999988643 2334556789999998764
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=86.84 E-value=1.1 Score=33.66 Aligned_cols=78 Identities=13% Similarity=0.098 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc------cceeeccccchHHHHHHHHHHHHH
Q 016094 107 GKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVN------RLMIYSQGCYMGGAVIRHAKDIAE 180 (395)
Q Consensus 107 a~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~------~~~~i~~~C~s~~~al~~A~~ll~ 180 (395)
-+.|++++|+++|++.+|||.+=+.- .+.+.+-..+++||++.... .+.-.-.||+|.-..+.++..|-+
T Consensus 24 Pv~A~~~lL~r~gl~~~Did~~EinE----AFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~~ 99 (124)
T d1m3ka2 24 PIPASRKALERAGWKIGDLDLVEANE----AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKR 99 (124)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCChhcccHHHhcc----cchhheeeehHhhCCChhhcCCCCCccccccCcCccchhHHHHHHHHHHh
Confidence 46789999999999999999875533 22233456788899875431 011122567777788888888877
Q ss_pred cCCCCeEEE
Q 016094 181 NNPGARVLV 189 (395)
Q Consensus 181 ~g~~~~vLv 189 (395)
.+ .++.++
T Consensus 100 ~~-~~~Gla 107 (124)
T d1m3ka2 100 RG-ARKGLA 107 (124)
T ss_dssp HT-CSEEEE
T ss_pred cC-CCEEEE
Confidence 65 456553
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=80.14 E-value=4.7 Score=31.21 Aligned_cols=70 Identities=13% Similarity=0.020 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce------eeccccchHHHHHHHHHH
Q 016094 104 PKLGKEAALKAIKEWGQPVSKITHLIFGAVYGVDMPGADVRLMNLLGLEPSVNRLM------IYSQGCYMGGAVIRHAKD 177 (395)
Q Consensus 104 ~~la~~Aa~~aL~~agi~~~~Id~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~------~i~~~C~s~~~al~~A~~ 177 (395)
.+-....+++.|+++|++.+|||..++.. ..+.+-..++++||+++...+.. .-+..+++-..+|.....
T Consensus 41 ~~~i~~~~~~~l~~~gl~~~di~~~v~Hq----gg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~ 116 (154)
T d1bi5a2 41 SKNITKALVEAFEPLGISDYNSIFWIAHP----GGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRK 116 (154)
T ss_dssp HHHHHHHHHHHHGGGTCCCTTSSEEEECC----SSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccccceEeecc----ccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHH
Confidence 34445677888999999999999887543 33455678999999987652110 134555666666655544
|