Citrus Sinensis ID: 016208

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390---
MDIVSANRKRNFAGRILVASVLTAVFIFMFSLSPDSNSTKAFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSRNN
cccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccccccccHHHHHHHccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEccccccccHHHHHHHHHHHccccccEEEcccccccccEECcccHHHHHHcccccccccHHHHHHHHHHHHHccccccccccc
**********NFAGRILVASVLTAVFIFMFSL*************EPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHIN*******
xxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MDIVSANRKRNFAGRILVASVLTAVFIFMFSLSPDSNSTKAFPRHEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNMGAVKVLQELFPQPGQLQFIYADLGDAKAVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVILEAMAAHKVKTLIYSSTCATYGEPDKMPITESTPQKPINPYGKAKKMSEDIIIDFSKTTNMAVMILRYFNVIGSDPEGRLGEAPHPELREHGRISGACFDAARGIIPGLKIRGTDYNTADGTCVRDYIDVTDLVDAHVLALANAKPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEYLSRRPGDYAEVYSDPSKIRDELNWTARFTDLQGSLQIAWRWQKTHINGYGSRNN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable UDP-arabinose 4-epimerase 3 confidentQ8H0B2
UDP-arabinose 4-epimerase 1 Acts as a UDP-D-xylose 4-epimerase but lacks both UDP-D-glucose and UDP-D-glucuronic acid 4-epimerase activities in vitro.confidentQ9SA77
UDP-glucose 4-epimerase probableQ9KDV3

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.1.-.-Racemases and epimerases.probable
5.1.3.-Acting on carbohydrates and derivatives.probable
5.1.3.5UDP-arabinose 4-epimerase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4EGB, chain A
Confidence level:very confident
Coverage over the Query: 51-237,251-389
View the alignment between query and template
View the model in PyMOL
Template: 1Z45, chain A
Confidence level:very confident
Coverage over the Query: 49-391
View the alignment between query and template
View the model in PyMOL