Citrus Sinensis ID: 016216
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 393 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | yes | no | 0.966 | 0.706 | 0.742 | 1e-175 | |
| Q8S528 | 534 | Aldehyde dehydrogenase fa | no | no | 0.888 | 0.653 | 0.748 | 1e-162 | |
| P20000 | 520 | Aldehyde dehydrogenase, m | yes | no | 0.837 | 0.632 | 0.615 | 1e-119 | |
| P11884 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.918 | 0.695 | 0.576 | 1e-118 | |
| Q2XQV4 | 521 | Aldehyde dehydrogenase, m | yes | no | 0.837 | 0.631 | 0.615 | 1e-118 | |
| Q5RF00 | 517 | Aldehyde dehydrogenase, m | yes | no | 0.910 | 0.692 | 0.575 | 1e-118 | |
| P05091 | 517 | Aldehyde dehydrogenase, m | yes | no | 0.910 | 0.692 | 0.575 | 1e-118 | |
| P47738 | 519 | Aldehyde dehydrogenase, m | yes | no | 0.918 | 0.695 | 0.576 | 1e-118 | |
| P81178 | 500 | Aldehyde dehydrogenase, m | N/A | no | 0.819 | 0.644 | 0.625 | 1e-117 | |
| Q62148 | 518 | Retinal dehydrogenase 2 O | no | no | 0.844 | 0.640 | 0.573 | 1e-116 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 615 bits (1587), Expect = e-175, Method: Compositional matrix adjust.
Identities = 283/381 (74%), Positives = 328/381 (86%), Gaps = 1/381 (0%)
Query: 3 AARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFSTA-AVVEEPIIPPVQISYTKNL 61
AARR+S+LLSRSF ++SP L RS GR + RF T+ A EE I P VQ+S+T+ L
Sbjct: 2 AARRVSSLLSRSFSASSPLLFRSQGRNCYNGGILRRFGTSSAAAEEIINPSVQVSHTQLL 61
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
ING FVD+ASGKTFP DPRT EVIA+VAEGDAEDI+RAV AR AFDEGPWPKM+ YER
Sbjct: 62 INGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYER 121
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
SR++LR ADL+EK+ EELA+LETW+NGKPY QSL +E+PM RL YYAGWADKIHGLT+
Sbjct: 122 SRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTI 181
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
P DGNY + TLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPLTA Y
Sbjct: 182 PADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYA 241
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
KLF EAGLPPGVLN+VSG+G TAGAALASHMDVDKL+FTG DTGK++ LAA SNLKP
Sbjct: 242 GKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKP 301
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
VTLELGGKSPFI+F+DAD+D+AVELAHFALF+NQGQCCCAGSRT+VHE+VYDEFVEK+KA
Sbjct: 302 VTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKA 361
Query: 362 RAMRRIVGDPFKSGVEQGPQV 382
RA++R+VGDPF+ G+EQGPQ+
Sbjct: 362 RALKRVVGDPFRKGIEQGPQI 382
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q8S528|AL2B7_ARATH Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 571 bits (1471), Expect = e-162, Method: Compositional matrix adjust.
Identities = 262/350 (74%), Positives = 306/350 (87%), Gaps = 1/350 (0%)
Query: 34 RGISRFST-AAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEG 92
RG R+S AA VE I PPV++ +T+ LI G+FVDA SGKTFP DPR EVIA V+EG
Sbjct: 29 RGAQRYSNLAAAVENTITPPVKVEHTQLLIGGRFVDAVSGKTFPTLDPRNGEVIAQVSEG 88
Query: 93 DAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152
DAED++RAVA ARKAFDEGPWPKMT YERS+I+ R ADLIEK+ +E+AALETW+NGKPY
Sbjct: 89 DAEDVNRAVAAARKAFDEGPWPKMTAYERSKILFRFADLIEKHNDEIAALETWDNGKPYE 148
Query: 153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
QS + EVPM+ R+ YYAGWADKIHG+T+PGDG +H+QTLHEPIGVAGQI+PWNFPLL+
Sbjct: 149 QSAQIEVPMLARVFRYYAGWADKIHGMTMPGDGPHHVQTLHEPIGVAGQIIPWNFPLLML 208
Query: 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
+WK+ PAL CGNT+VLK+AEQTPL+AL V KL HEAGLP GV+N+VSG+G TAGAA+ASH
Sbjct: 209 SWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASH 268
Query: 273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
MDVDK++FTG D GKI+ ELA+KSNLK VTLELGGKSPFI+ +DADVDQAVELAHFALF
Sbjct: 269 MDVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALF 328
Query: 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+NQGQCCCAGSRT+VHERVYDEFVEKAKARA++R VGDPFKSG+EQGPQV
Sbjct: 329 FNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQV 378
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/330 (61%), Positives = 248/330 (75%), Gaps = 1/330 (0%)
Query: 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-P 112
++ Y + IN ++ DA S KTFP +P T +VI +VAEGD D+DRAV AR AF G P
Sbjct: 36 EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSP 95
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
W +M ER R++ R ADLIE++ LAALET +NGKPY+ S ++ MV++ L YYAGW
Sbjct: 96 WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGW 155
Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
ADK HG T+P DG+Y T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AE
Sbjct: 156 ADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 215
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
QTPLTALYVA L EAG PPGV+NV+ G+GPTAGAA+ASH DVDK++FTG + G ++Q
Sbjct: 216 QTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 275
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
A KSNLK VTLELGGKSP II DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +Y
Sbjct: 276 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 335
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
EFVE++ ARA R+VG+PF S EQGPQV
Sbjct: 336 AEFVERSVARAKSRVVGNPFDSRTEQGPQV 365
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Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/364 (57%), Positives = 260/364 (71%), Gaps = 3/364 (0%)
Query: 22 LLRSLGRESSRARGISRFSTAAVVEEPIIPPVQ--ISYTKNLINGQFVDAASGKTFPVYD 79
+LR+ + R +SR +AA P Q + + IN ++ DA S KTFP +
Sbjct: 1 MLRAALSTARRGPRLSRLLSAAATSAVPAPNQQPEVFCNQIFINNEWHDAVSKKTFPTVN 60
Query: 80 PRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEE 138
P T EVI VAEG+ ED+D+AV A+ AF G PW +M +R R++ R ADLIE++
Sbjct: 61 PSTGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTY 120
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
LAALET +NGKPYV S ++ MV++ L YYAGWADK HG T+P DG++ T HEP+GV
Sbjct: 121 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGV 180
Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTALYVA L EAG PPGV+N+V
Sbjct: 181 CGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIV 240
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
G+GPTAGAA+ASH DVDK++FTG + G ++Q A SNLK VTLELGGKSP II DA
Sbjct: 241 PGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDA 300
Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
D+D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++ ARA R+VG+PF S EQ
Sbjct: 301 DMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQ 360
Query: 379 GPQV 382
GPQV
Sbjct: 361 GPQV 364
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Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/330 (61%), Positives = 249/330 (75%), Gaps = 1/330 (0%)
Query: 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-P 112
+I Y + IN ++ DA S KTFP +P T +VI +VAEGD ED+DRAV AR AF G P
Sbjct: 37 EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGDKEDVDRAVEAARAAFQLGSP 96
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
W ++ +R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGW
Sbjct: 97 WRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 156
Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
ADK HG T+P DG+Y T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K +E
Sbjct: 157 ADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSE 216
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
QTPLTALYVA L EAG PPGV+N+V GYGPTAGAA+ASH DVDK++FTG + G ++Q
Sbjct: 217 QTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQV 276
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
A KSNLK VTLELGGKSP II DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +Y
Sbjct: 277 AAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 336
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
EFVE++ ARA R+VG+PF S EQGPQ+
Sbjct: 337 AEFVERSVARARSRVVGNPFDSRTEQGPQI 366
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Is capable of converting retinaldehyde to retinoic acid. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5RF00|ALDH2_PONAB Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/365 (57%), Positives = 260/365 (71%), Gaps = 7/365 (1%)
Query: 22 LLRSLGRESSRARGISRFSTAAVVEEPIIPPVQ---ISYTKNLINGQFVDAASGKTFPVY 78
+LR+ R R + R +A + + P Q + + IN ++ DA S KTFP
Sbjct: 1 MLRAAARFGPR---LGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTV 57
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME 137
+P T EVI VAEGD ED+D+AV AR AF G PW +M R R++ R ADLIE++
Sbjct: 58 NPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 117
Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIG 197
LAALET +NGKPYV S ++ MV++ L YYAGWADK HG T+P DG++ T HEP+G
Sbjct: 118 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVG 177
Query: 198 VAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNV 257
V GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTALYVA L EAG PPGV+N+
Sbjct: 178 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNI 237
Query: 258 VSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD 317
V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNLK VTLELGGKSP II D
Sbjct: 238 VPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSD 297
Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
AD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++ ARA R+VG+PF S E
Sbjct: 298 ADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTE 357
Query: 378 QGPQV 382
QGPQV
Sbjct: 358 QGPQV 362
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Is capable of converting retinaldehyde to retinoic acid. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/365 (57%), Positives = 260/365 (71%), Gaps = 7/365 (1%)
Query: 22 LLRSLGRESSRARGISRFSTAAVVEEPIIPPVQ---ISYTKNLINGQFVDAASGKTFPVY 78
+LR+ R R + R +A + + P Q + + IN ++ DA S KTFP
Sbjct: 1 MLRAAARFGPR---LGRRLLSAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTV 57
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME 137
+P T EVI VAEGD ED+D+AV AR AF G PW +M R R++ R ADLIE++
Sbjct: 58 NPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 117
Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIG 197
LAALET +NGKPYV S ++ MV++ L YYAGWADK HG T+P DG++ T HEP+G
Sbjct: 118 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVG 177
Query: 198 VAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNV 257
V GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTALYVA L EAG PPGV+N+
Sbjct: 178 VCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNI 237
Query: 258 VSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD 317
V G+GPTAGAA+ASH DVDK++FTG + G+++Q A SNLK VTLELGGKSP II D
Sbjct: 238 VPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSD 297
Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
AD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++ ARA R+VG+PF S E
Sbjct: 298 ADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTE 357
Query: 378 QGPQV 382
QGPQV
Sbjct: 358 QGPQV 362
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/364 (57%), Positives = 258/364 (70%), Gaps = 3/364 (0%)
Query: 22 LLRSLGRESSRARGISRFSTAAVVEEPIIPPVQ--ISYTKNLINGQFVDAASGKTFPVYD 79
+LR+ R +SR +AA P Q + + IN ++ DA S KTFP +
Sbjct: 1 MLRAALTTVRRGPRLSRLLSAAATSAVPAPNHQPEVFCNQIFINNEWHDAVSRKTFPTVN 60
Query: 80 PRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEE 138
P T EVI VAEG+ ED+D+AV AR AF G PW +M +R R++ R ADLIE++
Sbjct: 61 PSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTY 120
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
LAALET +NGKPYV S ++ MV++ L YYAGWADK HG T+P DG++ T HEP+GV
Sbjct: 121 LAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGV 180
Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTALYVA L EAG PPGV+N+V
Sbjct: 181 CGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIV 240
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
G+GPTAGAA+ASH VDK++FTG + G ++Q A SNLK VTLELGGKSP II DA
Sbjct: 241 PGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDA 300
Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
D+D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++ ARA R+VG+PF S EQ
Sbjct: 301 DMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQ 360
Query: 379 GPQV 382
GPQV
Sbjct: 361 GPQV 364
|
Is capable of converting retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 243/323 (75%), Gaps = 1/323 (0%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPY 119
IN ++ DA S KTFP +P T EVI VAEG ED+D+AV AR AF G PW +M
Sbjct: 23 FINNEWHDAVSKKTFPTVNPSTGEVICQVAEGSKEDVDKAVKAARAAFQLGSPWRRMDAS 82
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
+R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGWADK HG
Sbjct: 83 DRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGK 142
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AEQTPLTAL
Sbjct: 143 TIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTAL 202
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
YVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G ++Q A SNL
Sbjct: 203 YVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNL 262
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K VTLELGGKSP II DAD+D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++
Sbjct: 263 KRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERS 322
Query: 360 KARAMRRIVGDPFKSGVEQGPQV 382
ARA R+VG+PF S EQGPQV
Sbjct: 323 VARAKSRVVGNPFDSRTEQGPQV 345
|
Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/333 (57%), Positives = 249/333 (74%), Gaps = 1/333 (0%)
Query: 51 PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE 110
P ++I YTK IN ++ ++ SG+ FPV +P T E + V E D DID+AV AR AF
Sbjct: 31 PNLEIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSL 90
Query: 111 GP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
G W +M ER R++ + ADL+E++ LA +E+ N GKP++Q+ ++ V++ L YY
Sbjct: 91 GSVWRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYY 150
Query: 170 AGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229
AGWADKIHG+T+P DG+Y T HEPIGV GQI+PWNFPLL+FTWK+APAL CGNT+V+K
Sbjct: 151 AGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIK 210
Query: 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289
AEQTPL+ALY+ L EAG PPGV+N++ GYGPTAGAA+ASH+ +DK++FTG + GK+
Sbjct: 211 PAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKL 270
Query: 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
+QE A +SNLK VTLELGGKSP IIF DAD+D AVE AH +F+NQGQCC AGSR +V E
Sbjct: 271 IQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEE 330
Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+Y+EFV+++ RA RRIVG PF EQGPQ+
Sbjct: 331 SIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQI 363
|
Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 393 | ||||||
| 255540719 | 534 | aldehyde dehydrogenase, putative [Ricinu | 0.905 | 0.666 | 0.831 | 0.0 | |
| 356562748 | 542 | PREDICTED: LOW QUALITY PROTEIN: aldehyde | 0.916 | 0.664 | 0.813 | 1e-178 | |
| 224133500 | 542 | predicted protein [Populus trichocarpa] | 0.938 | 0.680 | 0.796 | 1e-177 | |
| 312283557 | 538 | unnamed protein product [Thellungiella h | 0.966 | 0.706 | 0.755 | 1e-175 | |
| 356516690 | 540 | PREDICTED: aldehyde dehydrogenase family | 0.933 | 0.679 | 0.788 | 1e-175 | |
| 449440686 | 548 | PREDICTED: aldehyde dehydrogenase family | 0.918 | 0.658 | 0.799 | 1e-174 | |
| 15228319 | 538 | aldehyde dehydrogenase 2B4 [Arabidopsis | 0.966 | 0.706 | 0.742 | 1e-173 | |
| 73647513 | 537 | aldehyde dehydrogenase [Vitis pseudoreti | 0.910 | 0.666 | 0.796 | 1e-173 | |
| 356497822 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.972 | 0.710 | 0.751 | 1e-173 | |
| 225457075 | 538 | PREDICTED: aldehyde dehydrogenase family | 0.910 | 0.665 | 0.788 | 1e-173 |
| >gi|255540719|ref|XP_002511424.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223550539|gb|EEF52026.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/356 (83%), Positives = 326/356 (91%)
Query: 27 GRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVI 86
G+ +R R I RFSTAAV EEPI PPVQISYT++ INGQFVDAASGKTFP YDPRT +VI
Sbjct: 23 GKNPNRGRSIYRFSTAAVAEEPITPPVQISYTQHFINGQFVDAASGKTFPAYDPRTGQVI 82
Query: 87 ANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWN 146
A VAEGDAEDI+RAVA ARKAFDEGPWPKMT YERSRI+LR A+L+EKN +ELAALETWN
Sbjct: 83 AQVAEGDAEDINRAVAAARKAFDEGPWPKMTAYERSRIILRFAELVEKNNDELAALETWN 142
Query: 147 NGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWN 206
NGKPY QS KSE+P++ RL HYYAGWADKIHGLTVP DGN+H+Q LHEPIGVAGQI+PWN
Sbjct: 143 NGKPYEQSAKSELPLLSRLFHYYAGWADKIHGLTVPADGNHHVQILHEPIGVAGQIIPWN 202
Query: 207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAG 266
FPL+LF WKV PAL CGNTIVLK+AEQTPLTALY AKLFHEAGLPPGVLNVVSGYGPTAG
Sbjct: 203 FPLILFAWKVGPALACGNTIVLKTAEQTPLTALYAAKLFHEAGLPPGVLNVVSGYGPTAG 262
Query: 267 AALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326
AALASHMDVDKL+FTG +TGKIV EL+AKSNLKPVTLELGGKSPF++ +DADVD+AVEL
Sbjct: 263 AALASHMDVDKLAFTGSTETGKIVLELSAKSNLKPVTLELGGKSPFVVCEDADVDKAVEL 322
Query: 327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
AHFALF+NQGQCCCAGSRTYVHERVYDEF+EKAKARAMRR+VGDPF+ GVEQGPQ+
Sbjct: 323 AHFALFFNQGQCCCAGSRTYVHERVYDEFLEKAKARAMRRVVGDPFRKGVEQGPQI 378
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356562748|ref|XP_003549631.1| PREDICTED: LOW QUALITY PROTEIN: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/360 (81%), Positives = 324/360 (90%)
Query: 23 LRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRT 82
L SLGR R I+RFSTAA VEE I P V I YT+NLINGQFVDAASGKTFP YDPR+
Sbjct: 27 LHSLGRNPGGWRNINRFSTAAAVEELITPQVSIRYTQNLINGQFVDAASGKTFPTYDPRS 86
Query: 83 AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL 142
EVIANVAEGD EDI+RAV+ ARKAFDEGPWPKMT YERSRI+LR ADL+EK+ +ELAAL
Sbjct: 87 GEVIANVAEGDVEDINRAVSAARKAFDEGPWPKMTAYERSRILLRFADLVEKHSDELAAL 146
Query: 143 ETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQI 202
ETWNNGK Y Q+ K+E+PM VRL HYYAGWADKIHGLTVP DG+YH+QTLHEPIGVAGQI
Sbjct: 147 ETWNNGKTYEQAAKTELPMFVRLFHYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQI 206
Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262
+PWNFPL++F WKV PAL CGNTIVLK+AEQTPLTAL+VAKLFHEAGLP GVLNVVSGYG
Sbjct: 207 IPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLTALFVAKLFHEAGLPDGVLNVVSGYG 266
Query: 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQ 322
PTAGAALASHMDVDKL+FTG DTGK+V ELAA+SNLKPVTLELGGKSPFII +DADVD+
Sbjct: 267 PTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIICEDADVDK 326
Query: 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
AVELAHFALF+NQGQCCCAGSRT+VHERVYDEF+EK+K RA+RR+VGDPFK GVEQGPQ+
Sbjct: 327 AVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKSKKRALRRVVGDPFKKGVEQGPQI 386
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224133500|ref|XP_002321583.1| predicted protein [Populus trichocarpa] gi|222868579|gb|EEF05710.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 294/369 (79%), Positives = 327/369 (88%)
Query: 14 SFPSASPSLLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGK 73
S PSAS LL S G+ R RG+ RFS AA +EE I PPVQISYT++LINGQFVDAASGK
Sbjct: 18 SAPSASTPLLLSRGKNPGRGRGVCRFSNAAALEETITPPVQISYTQHLINGQFVDAASGK 77
Query: 74 TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133
TFP +DPRT EVIA+VAEGDAED++RAVA ARKAFDEGPWPKM+ YERS IMLR ADL++
Sbjct: 78 TFPTHDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMSAYERSLIMLRFADLVD 137
Query: 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH 193
K+ ELAALE+WN+GKPY QS KSE+P RL YYAGWADKIHGLTVP DGN+H+QTLH
Sbjct: 138 KHRGELAALESWNSGKPYEQSAKSELPSFARLFRYYAGWADKIHGLTVPADGNHHVQTLH 197
Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG 253
EPIGVAGQI+PWNFPL++F WKV PAL CGNTIVLKSAEQTPLTALY AKLF EAGLPPG
Sbjct: 198 EPIGVAGQIIPWNFPLIMFAWKVGPALACGNTIVLKSAEQTPLTALYAAKLFQEAGLPPG 257
Query: 254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313
VLNVVSGYGP+AGAALA HMDVDK++FTG +TGKI+ ELAAKSNLK VTLELGGKSPFI
Sbjct: 258 VLNVVSGYGPSAGAALACHMDVDKIAFTGSTETGKIILELAAKSNLKAVTLELGGKSPFI 317
Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
+ +DADVD+AVELAHFALF+NQGQCCCAGSRTYVHERVYDEFVEKAKARA+RR+VGDPFK
Sbjct: 318 VCEDADVDKAVELAHFALFFNQGQCCCAGSRTYVHERVYDEFVEKAKARALRRVVGDPFK 377
Query: 374 SGVEQGPQV 382
GVEQGPQ+
Sbjct: 378 KGVEQGPQI 386
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312283557|dbj|BAJ34644.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 288/381 (75%), Positives = 331/381 (86%), Gaps = 1/381 (0%)
Query: 3 AARRISTLLSRSFPSASPSLLRSLGRESSRARGISR-FSTAAVVEEPIIPPVQISYTKNL 61
AARR+S+LL RSF ++SP L RS GR I+R F T++ EE I P VQ+S+T+ L
Sbjct: 2 AARRVSSLLYRSFSASSPFLFRSQGRNCYNGSRIARRFGTSSAAEEIISPSVQVSHTQLL 61
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I+G FVDAASGKTFP DPRT EVIA+VAEGDAEDI+RAV ARKAFDEGPWPKMT YER
Sbjct: 62 IDGNFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARKAFDEGPWPKMTAYER 121
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
SRIMLR ADL+EK+ E+LA+LE+W+NGK Y Q+ SE+PM+ RL YYAGWADKIHGLTV
Sbjct: 122 SRIMLRFADLVEKHSEQLASLESWDNGKTYEQAKTSEIPMLARLFRYYAGWADKIHGLTV 181
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
P DGNYH+QTLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPLTA YV
Sbjct: 182 PADGNYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYV 241
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
KLF EAGLPPGVLN+VSG+GPTAGA+LASHMDVDKL+FTG DTGK++ LAA SNLKP
Sbjct: 242 GKLFLEAGLPPGVLNIVSGFGPTAGASLASHMDVDKLAFTGSTDTGKVILGLAANSNLKP 301
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
VTLELGGKSPFI+F+DAD+++AVELAHFALF+NQGQCCCAGSRTYVHE+VYDEFVEKAKA
Sbjct: 302 VTLELGGKSPFIVFEDADINKAVELAHFALFFNQGQCCCAGSRTYVHEKVYDEFVEKAKA 361
Query: 362 RAMRRIVGDPFKSGVEQGPQV 382
RA++R+VGDPFK G EQGPQ+
Sbjct: 362 RALKRVVGDPFKKGTEQGPQI 382
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516690|ref|XP_003527026.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 291/369 (78%), Positives = 328/369 (88%), Gaps = 2/369 (0%)
Query: 14 SFPSASPSLLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGK 73
SF +AS LL SLGR S + +RFSTAA VE+ I P V I+YTK+LINGQFVDAASGK
Sbjct: 18 SFQAAS--LLHSLGRNSGKWGNFNRFSTAAAVEDLITPQVPITYTKHLINGQFVDAASGK 75
Query: 74 TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133
TFP YDPRT EVIA VAEGDAEDI+RAV+ ARKAFDEGPWPK+T YER +I+LR ADL+E
Sbjct: 76 TFPTYDPRTGEVIAQVAEGDAEDINRAVSAARKAFDEGPWPKLTAYERCKIILRFADLVE 135
Query: 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH 193
K+ +ELAALETWNNGKPY QS +E+P VRL YYAGWADKIHGLTVP DGNYH++TLH
Sbjct: 136 KHGDELAALETWNNGKPYEQSATAELPTFVRLFRYYAGWADKIHGLTVPADGNYHVETLH 195
Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG 253
EPIGVAGQI+PWNFPLL+F WKV PAL CGNT++LK+AEQTPLTALYVAKLFHEAGLPPG
Sbjct: 196 EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVILKTAEQTPLTALYVAKLFHEAGLPPG 255
Query: 254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313
VLNVVSGYGPTAGAALASHMDVDKL+FTG +TGK+V LAA+SNLKPVTLELGGKSPFI
Sbjct: 256 VLNVVSGYGPTAGAALASHMDVDKLAFTGSTETGKVVLGLAAQSNLKPVTLELGGKSPFI 315
Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
+ +DADVDQAVELAHFALF+NQGQCCCAGSRT+VHE +YDEF+EKAKARA++R+VGDPFK
Sbjct: 316 VCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHEHIYDEFLEKAKARALKRVVGDPFK 375
Query: 374 SGVEQGPQV 382
GVEQGPQ+
Sbjct: 376 KGVEQGPQI 384
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449440686|ref|XP_004138115.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 291/364 (79%), Positives = 330/364 (90%), Gaps = 3/364 (0%)
Query: 21 SLLRSLGRESS-RARGISRFSTAAVVEEPII-PPVQISYTKNLINGQFVDAASGKTFPVY 78
SLL+S GR S RG FST+A+ EE +I PPVQI+YT+NLINGQFVD+ASGKTFP Y
Sbjct: 30 SLLQSHGRVSRFLGRGYG-FSTSALAEEELITPPVQINYTQNLINGQFVDSASGKTFPTY 88
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
DPRT EVIA+VAEGDAED++RAV+ ARKAFDEGPWP+M+ YERSRI+LR ADLIEK+ E
Sbjct: 89 DPRTGEVIAHVAEGDAEDVNRAVSAARKAFDEGPWPRMSAYERSRILLRFADLIEKHTPE 148
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
L+ALETWNNGKPY QSLKSE+P++VRL HYYAGWADKIHGLTVP DGN+H+Q LHEPIGV
Sbjct: 149 LSALETWNNGKPYEQSLKSELPLLVRLFHYYAGWADKIHGLTVPADGNHHVQVLHEPIGV 208
Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
AGQI+PWNFPL++F WKV PAL CGNT+VLK+AEQTPLTALYVAKL HEAGLPPGVLN+V
Sbjct: 209 AGQIIPWNFPLIMFAWKVGPALACGNTVVLKTAEQTPLTALYVAKLLHEAGLPPGVLNIV 268
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
SGYGPTAGAALASHMDVDKL+FTG TGK+V ELAAKSNLKPVTLELGGKSPFI+ +DA
Sbjct: 269 SGYGPTAGAALASHMDVDKLAFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDA 328
Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
DVD+AVELAHFALF+NQGQCCCAGSRT+VHERV++EFVEK+KARA RR+VGDPFK GVEQ
Sbjct: 329 DVDKAVELAHFALFFNQGQCCCAGSRTFVHERVHEEFVEKSKARAQRRVVGDPFKKGVEQ 388
Query: 379 GPQV 382
GPQ+
Sbjct: 389 GPQI 392
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15228319|ref|NP_190383.1| aldehyde dehydrogenase 2B4 [Arabidopsis thaliana] gi|75313899|sp|Q9SU63.1|AL2B4_ARATH RecName: Full=Aldehyde dehydrogenase family 2 member B4, mitochondrial; Short=ALDH2a; Flags: Precursor gi|11935201|gb|AAG42016.1|AF327426_1 putative (NAD+) aldehyde dehydrogenase [Arabidopsis thaliana] gi|13194814|gb|AAK15569.1|AF349522_1 putative aldehyde dehydrogenase (NAD+) [Arabidopsis thaliana] gi|13926325|gb|AAK49627.1|AF372911_1 AT3g48000/T17F15_130 [Arabidopsis thaliana] gi|4678328|emb|CAB41139.1| aldehyde dehydrogenase (NAD+)-like protein [Arabidopsis thaliana] gi|8574427|dbj|BAA96792.1| aldehyde dehydrogenase [Arabidopsis thaliana] gi|19699355|gb|AAL91287.1| AT3g48000/T17F15_130 [Arabidopsis thaliana] gi|20530141|gb|AAM27003.1| aldehyde dehydrogenase ALDH2a [Arabidopsis thaliana] gi|23397220|gb|AAN31892.1| putative aldehyde dehydrogenase (NAD+) [Arabidopsis thaliana] gi|30102522|gb|AAP21179.1| At3g48000/T17F15_130 [Arabidopsis thaliana] gi|332644834|gb|AEE78355.1| aldehyde dehydrogenase 2B4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 283/381 (74%), Positives = 328/381 (86%), Gaps = 1/381 (0%)
Query: 3 AARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFSTA-AVVEEPIIPPVQISYTKNL 61
AARR+S+LLSRSF ++SP L RS GR + RF T+ A EE I P VQ+S+T+ L
Sbjct: 2 AARRVSSLLSRSFSASSPLLFRSQGRNCYNGGILRRFGTSSAAAEEIINPSVQVSHTQLL 61
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
ING FVD+ASGKTFP DPRT EVIA+VAEGDAEDI+RAV AR AFDEGPWPKM+ YER
Sbjct: 62 INGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYER 121
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
SR++LR ADL+EK+ EELA+LETW+NGKPY QSL +E+PM RL YYAGWADKIHGLT+
Sbjct: 122 SRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTI 181
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
P DGNY + TLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPLTA Y
Sbjct: 182 PADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYA 241
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
KLF EAGLPPGVLN+VSG+G TAGAALASHMDVDKL+FTG DTGK++ LAA SNLKP
Sbjct: 242 GKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKP 301
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
VTLELGGKSPFI+F+DAD+D+AVELAHFALF+NQGQCCCAGSRT+VHE+VYDEFVEK+KA
Sbjct: 302 VTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKA 361
Query: 362 RAMRRIVGDPFKSGVEQGPQV 382
RA++R+VGDPF+ G+EQGPQ+
Sbjct: 362 RALKRVVGDPFRKGIEQGPQI 382
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|73647513|gb|AAZ79355.1| aldehyde dehydrogenase [Vitis pseudoreticulata] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/359 (79%), Positives = 322/359 (89%), Gaps = 1/359 (0%)
Query: 25 SLGRESSRARGISRFSTAAV-VEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTA 83
SLG+ +R + I RFSTAA VEE I P VQI+YT+ LINGQFVDAASGKTFP +DPRT
Sbjct: 23 SLGKNFNRGKSIHRFSTAAAAVEELITPTVQINYTQLLINGQFVDAASGKTFPTFDPRTG 82
Query: 84 EVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE 143
EVIANVAEGDAEDI+RAV+ ARKAFDEGPWP+M+PYERSRI+LR ADL EK+ +ELAALE
Sbjct: 83 EVIANVAEGDAEDINRAVSAARKAFDEGPWPRMSPYERSRILLRFADLAEKHNDELAALE 142
Query: 144 TWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIV 203
TWNNGKPY Q+ K+E+P+ VRL YYAGWADKIHGLTV DG +H+Q LHEPIGVAGQI+
Sbjct: 143 TWNNGKPYEQAAKAELPLFVRLFRYYAGWADKIHGLTVQADGPHHVQILHEPIGVAGQII 202
Query: 204 PWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP 263
PWNFPL++F WKV PAL CGNTIVLK+AEQTPLTAL+ AKLFHEAGLPPGVLN+VSGYGP
Sbjct: 203 PWNFPLMMFAWKVGPALACGNTIVLKTAEQTPLTALFAAKLFHEAGLPPGVLNIVSGYGP 262
Query: 264 TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA 323
TAGAALASHMDVDK++FTG DTGKIVQELAAKSNLKPVTLELGGKSPFI+ +DAD+DQA
Sbjct: 263 TAGAALASHMDVDKIAFTGSTDTGKIVQELAAKSNLKPVTLELGGKSPFIVCEDADIDQA 322
Query: 324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
VELAHFALF+NQGQCCCAGSRT+VHE VYDEF+EKAKARA+ R VGDPFK G+EQGPQ+
Sbjct: 323 VELAHFALFFNQGQCCCAGSRTFVHESVYDEFIEKAKARALSRTVGDPFKKGIEQGPQI 381
|
Source: Vitis pseudoreticulata Species: Vitis pseudoreticulata Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497822|ref|XP_003517756.1| PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 287/382 (75%), Positives = 337/382 (88%)
Query: 1 MAAARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYTKN 60
MA++ RIS LLSRSF SAS + L S G + G+S+FSTAA +EEPI PPV++ +T+
Sbjct: 1 MASSMRISRLLSRSFLSASTTPLFSRGGSGALGAGLSKFSTAAAIEEPIKPPVKVEHTQL 60
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
LI+G+FVDAA+GKTFP DPRT +VI++VAEGD ED+DRAVA ARKAFD GPWPKMT YE
Sbjct: 61 LIDGKFVDAATGKTFPTLDPRTGDVISHVAEGDHEDVDRAVAAARKAFDHGPWPKMTAYE 120
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R RI+LRAADL EK+ +ELAALETW+NGKPY QS + E+PM+VRL YYAGWADKIHGLT
Sbjct: 121 RQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLT 180
Query: 181 VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
VP DG YH+QTLHEPIGVAGQI+PWNFPL++F WKV PAL CGNTIVLK+AEQTPL+ALY
Sbjct: 181 VPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLSALY 240
Query: 241 VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300
+KL HEAGLPPGVLNV+SG+GPTAGAA+ASHMD+DKL+FTG +TGK+V ELAA+SNLK
Sbjct: 241 ASKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTETGKVVLELAARSNLK 300
Query: 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360
PVTLELGGKSPFI+ +DADVD+AVELAHFALF+NQGQCCCAGSRT+VHERVYDEF+EKAK
Sbjct: 301 PVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKAK 360
Query: 361 ARAMRRIVGDPFKSGVEQGPQV 382
ARA++R VGDPFK G+EQGPQ+
Sbjct: 361 ARALKRAVGDPFKGGIEQGPQI 382
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457075|ref|XP_002283132.1| PREDICTED: aldehyde dehydrogenase family 2 member B4, mitochondrial [Vitis vinifera] gi|297733807|emb|CBI15054.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 284/360 (78%), Positives = 322/360 (89%), Gaps = 2/360 (0%)
Query: 25 SLGRESSRARGISRFSTAAV--VEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRT 82
SLG+ +R + I RFSTAA VEE I P VQI+YT+ LINGQFVDAASGKTFP +DPRT
Sbjct: 23 SLGKNFNRGKSIHRFSTAAAAAVEELITPTVQINYTQLLINGQFVDAASGKTFPTFDPRT 82
Query: 83 AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL 142
EVIANVAEGDAEDI+RAV+ ARKAFDEGPWP+M+PYERSRI+LR ADL EK+ +ELAAL
Sbjct: 83 GEVIANVAEGDAEDINRAVSAARKAFDEGPWPRMSPYERSRILLRFADLAEKHNDELAAL 142
Query: 143 ETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQI 202
ETWNNGKPY Q+ K+E+P+ VRL YYAGWADKIHGLTV DG +H+Q LHEPIGVAGQI
Sbjct: 143 ETWNNGKPYEQAAKAELPLFVRLFRYYAGWADKIHGLTVQADGPHHVQILHEPIGVAGQI 202
Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262
+PWNFPL++F WKV PAL CGNTIVLK+AEQTPLTAL+ AKLFHEAGLPPG+LN+VSGYG
Sbjct: 203 IPWNFPLMMFAWKVGPALACGNTIVLKTAEQTPLTALFAAKLFHEAGLPPGILNIVSGYG 262
Query: 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQ 322
PTAGAALASHMDVDK++FTG DTGKIVQELA+KSNLKPVTLELGGKSPFI+ +DAD+DQ
Sbjct: 263 PTAGAALASHMDVDKIAFTGSTDTGKIVQELASKSNLKPVTLELGGKSPFIVCEDADIDQ 322
Query: 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
AVELAHFALF+NQGQCCCAGSRT+VHE VYDEF+EKAKARA+ R VGDPFK G+EQGPQ+
Sbjct: 323 AVELAHFALFFNQGQCCCAGSRTFVHESVYDEFIEKAKARALSRTVGDPFKKGIEQGPQI 382
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 393 | ||||||
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.966 | 0.706 | 0.721 | 9.5e-153 | |
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 0.956 | 0.704 | 0.716 | 8.8e-150 | |
| UNIPROTKB|P20000 | 520 | ALDH2 "Aldehyde dehydrogenase, | 0.875 | 0.661 | 0.600 | 1.1e-108 | |
| UNIPROTKB|Q2XQV4 | 521 | ALDH2 "Aldehyde dehydrogenase, | 0.882 | 0.666 | 0.6 | 1.1e-108 | |
| UNIPROTKB|P05091 | 517 | ALDH2 "Aldehyde dehydrogenase, | 0.882 | 0.671 | 0.597 | 2.4e-108 | |
| UNIPROTKB|F1PBJ8 | 521 | ALDH2 "Uncharacterized protein | 0.882 | 0.666 | 0.602 | 3e-108 | |
| RGD|69219 | 519 | Aldh2 "aldehyde dehydrogenase | 0.885 | 0.670 | 0.592 | 6.3e-108 | |
| MGI|MGI:99600 | 519 | Aldh2 "aldehyde dehydrogenase | 0.885 | 0.670 | 0.592 | 8.1e-108 | |
| UNIPROTKB|E1BT93 | 519 | ALDH2 "Uncharacterized protein | 0.888 | 0.672 | 0.576 | 4.4e-107 | |
| ZFIN|ZDB-GENE-030326-5 | 516 | aldh2.2 "aldehyde dehydrogenas | 0.880 | 0.670 | 0.571 | 9.2e-107 |
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1490 (529.6 bits), Expect = 9.5e-153, P = 9.5e-153
Identities = 275/381 (72%), Positives = 321/381 (84%)
Query: 3 AARRISTLLSRSFPSAXXXXXXXXXXXXXXARGISRFSTAAVVEEPII-PPVQISYTKNL 61
AARR+S+LLSRSF ++ + RF T++ E II P VQ+S+T+ L
Sbjct: 2 AARRVSSLLSRSFSASSPLLFRSQGRNCYNGGILRRFGTSSAAAEEIINPSVQVSHTQLL 61
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
ING FVD+ASGKTFP DPRT EVIA+VAEGDAEDI+RAV AR AFDEGPWPKM+ YER
Sbjct: 62 INGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYER 121
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
SR++LR ADL+EK+ EELA+LETW+NGKPY QSL +E+PM RL YYAGWADKIHGLT+
Sbjct: 122 SRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTI 181
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
P DGNY + TLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPLTA Y
Sbjct: 182 PADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYA 241
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
KLF EAGLPPGVLN+VSG+G TAGAALASHMDVDKL+FTG DTGK++ LAA SNLKP
Sbjct: 242 GKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKP 301
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
VTLELGGKSPFI+F+DAD+D+AVELAHFALF+NQGQCCCAGSRT+VHE+VYDEFVEK+KA
Sbjct: 302 VTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKA 361
Query: 362 RAMRRIVGDPFKSGVEQGPQV 382
RA++R+VGDPF+ G+EQGPQ+
Sbjct: 362 RALKRVVGDPFRKGIEQGPQI 382
|
|
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1462 (519.7 bits), Expect = 8.8e-150, P = 8.8e-150
Identities = 273/381 (71%), Positives = 321/381 (84%)
Query: 3 AARRISTLLSRSFPSAXXXXXXXXXXXXXXARGISRFST-AAVVEEPIIPPVQISYTKNL 61
A+RR+S+LLSRSF S+ RG R+S AA VE I PPV++ +T+ L
Sbjct: 2 ASRRVSSLLSRSFMSSSRSIFSLRGMN----RGAQRYSNLAAAVENTITPPVKVEHTQLL 57
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I G+FVDA SGKTFP DPR EVIA V+EGDAED++RAVA ARKAFDEGPWPKMT YER
Sbjct: 58 IGGRFVDAVSGKTFPTLDPRNGEVIAQVSEGDAEDVNRAVAAARKAFDEGPWPKMTAYER 117
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
S+I+ R ADLIEK+ +E+AALETW+NGKPY QS + EVPM+ R+ YYAGWADKIHG+T+
Sbjct: 118 SKILFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWADKIHGMTM 177
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
PGDG +H+QTLHEPIGVAGQI+PWNFPLL+ +WK+ PAL CGNT+VLK+AEQTPL+AL V
Sbjct: 178 PGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLV 237
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
KL HEAGLP GV+N+VSG+G TAGAA+ASHMDVDK++FTG D GKI+ ELA+KSNLK
Sbjct: 238 GKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELASKSNLKA 297
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
VTLELGGKSPFI+ +DADVDQAVELAHFALF+NQGQCCCAGSRT+VHERVYDEFVEKAKA
Sbjct: 298 VTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKA 357
Query: 362 RAMRRIVGDPFKSGVEQGPQV 382
RA++R VGDPFKSG+EQGPQV
Sbjct: 358 RALKRNVGDPFKSGIEQGPQV 378
|
|
| UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
Identities = 209/348 (60%), Positives = 255/348 (73%)
Query: 38 RFSTAAV--VEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAE 95
R +AA V P P ++ Y + IN ++ DA S KTFP +P T +VI +VAEGD
Sbjct: 19 RLLSAATQAVPTPNQQP-EVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKA 77
Query: 96 DIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154
D+DRAV AR AF G PW +M ER R++ R ADLIE++ LAALET +NGKPY+ S
Sbjct: 78 DVDRAVKAARAAFQLGSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIIS 137
Query: 155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214
++ MV++ L YYAGWADK HG T+P DG+Y T HEP+GV GQI+PWNFPLL+ W
Sbjct: 138 YLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAW 197
Query: 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMD 274
K+ PAL GN +V+K AEQTPLTALYVA L EAG PPGV+NV+ G+GPTAGAA+ASH D
Sbjct: 198 KLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHED 257
Query: 275 VDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN 334
VDK++FTG + G ++Q A KSNLK VTLELGGKSP II DAD+D AVE AHFALF+N
Sbjct: 258 VDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFN 317
Query: 335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
QGQCCCAGSRT+V E +Y EFVE++ ARA R+VG+PF S EQGPQV
Sbjct: 318 QGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQV 365
|
|
| UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
Identities = 210/350 (60%), Positives = 257/350 (73%)
Query: 34 RGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGD 93
R +S T AV P P +I Y + IN ++ DA S KTFP +P T +VI +VAEGD
Sbjct: 19 RLLSAAPTQAV-PAPNQQP-EIFYNQIFINNEWHDAISKKTFPTVNPSTGDVICHVAEGD 76
Query: 94 AEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152
ED+DRAV AR AF G PW ++ +R R++ R ADLIE++ LAALET +NGKPYV
Sbjct: 77 KEDVDRAVEAARAAFQLGSPWRRLDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYV 136
Query: 153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
S ++ MV++ L YYAGWADK HG T+P DG+Y T HEP+GV GQI+PWNFPLL+
Sbjct: 137 ISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQ 196
Query: 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
WK+ PAL GN +V+K +EQTPLTALYVA L EAG PPGV+N+V GYGPTAGAA+ASH
Sbjct: 197 AWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASH 256
Query: 273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
DVDK++FTG + G ++Q A KSNLK VTLELGGKSP II DAD+D AVE AHFALF
Sbjct: 257 EDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 316
Query: 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+NQGQCCCAGSRT+V E +Y EFVE++ ARA R+VG+PF S EQGPQ+
Sbjct: 317 FNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQI 366
|
|
| UNIPROTKB|P05091 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 209/350 (59%), Positives = 256/350 (73%)
Query: 34 RGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGD 93
R +S +T AV P P ++ + IN ++ DA S KTFP +P T EVI VAEGD
Sbjct: 15 RLLSAAATQAV-PAPNQQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGD 72
Query: 94 AEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152
ED+D+AV AR AF G PW +M R R++ R ADLIE++ LAALET +NGKPYV
Sbjct: 73 KEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYV 132
Query: 153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
S ++ MV++ L YYAGWADK HG T+P DG++ T HEP+GV GQI+PWNFPLL+
Sbjct: 133 ISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 192
Query: 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
WK+ PAL GN +V+K AEQTPLTALYVA L EAG PPGV+N+V G+GPTAGAA+ASH
Sbjct: 193 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASH 252
Query: 273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
DVDK++FTG + G+++Q A SNLK VTLELGGKSP II DAD+D AVE AHFALF
Sbjct: 253 EDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF 312
Query: 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+NQGQCCCAGSRT+V E +YDEFVE++ ARA R+VG+PF S EQGPQV
Sbjct: 313 FNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 362
|
|
| UNIPROTKB|F1PBJ8 ALDH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 211/350 (60%), Positives = 256/350 (73%)
Query: 34 RGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGD 93
R +S S+ AV P P ++ Y + IN ++ DA S KTFP +P T EVI VAEGD
Sbjct: 19 RLLSAASSQAV-PAPNQQP-EVFYNQIFINNEWHDAVSKKTFPTINPSTGEVICQVAEGD 76
Query: 94 AEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152
ED+D+AV AR AF G PW +M +R R++ R ADLIE++ LAALET +NGKPYV
Sbjct: 77 KEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYV 136
Query: 153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
S ++ MV+R L YYAGWADK HG T+P DG++ T HEP+GV GQI+PWNFPLL+
Sbjct: 137 ISYLVDLDMVLRCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 196
Query: 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
WK+ PAL GN IV+K AEQTPLTALYVA L EAG PPGV+N++ G+GPTAGAA+ASH
Sbjct: 197 AWKLGPALATGNVIVMKVAEQTPLTALYVANLIKEAGFPPGVVNIIPGFGPTAGAAIASH 256
Query: 273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
DVDK++FTG + G +VQ A SNLK VTLELGGKSP II DAD++ AVE AHFALF
Sbjct: 257 EDVDKVAFTGSTEVGHLVQVAAGNSNLKRVTLELGGKSPNIIMSDADMNWAVEQAHFALF 316
Query: 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+NQGQCCCAGSRT+V E VY EFVE++ ARA R+VG+PF S EQGPQV
Sbjct: 317 FNQGQCCCAGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQV 366
|
|
| RGD|69219 Aldh2 "aldehyde dehydrogenase 2 family (mitochondrial)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 208/351 (59%), Positives = 258/351 (73%)
Query: 33 ARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEG 92
+R +S +T+AV P P ++ + IN ++ DA S KTFP +P T EVI VAEG
Sbjct: 16 SRLLSAAATSAV-PAPNQQP-EVFCNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEG 73
Query: 93 DAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY 151
+ ED+D+AV A+ AF G PW +M +R R++ R ADLIE++ LAALET +NGKPY
Sbjct: 74 NKEDVDKAVKAAQAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPY 133
Query: 152 VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211
V S ++ MV++ L YYAGWADK HG T+P DG++ T HEP+GV GQI+PWNFPLL+
Sbjct: 134 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM 193
Query: 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 271
WK+ PAL GN +V+K AEQTPLTALYVA L EAG PPGV+N+V G+GPTAGAA+AS
Sbjct: 194 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIAS 253
Query: 272 HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL 331
H DVDK++FTG + G ++Q A SNLK VTLELGGKSP II DAD+D AVE AHFAL
Sbjct: 254 HEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFAL 313
Query: 332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
F+NQGQCCCAGSRT+V E VYDEFVE++ ARA R+VG+PF S EQGPQV
Sbjct: 314 FFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQV 364
|
|
| MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 208/351 (59%), Positives = 257/351 (73%)
Query: 33 ARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEG 92
+R +S +T+AV P P ++ + IN ++ DA S KTFP +P T EVI VAEG
Sbjct: 16 SRLLSAAATSAV-PAPNHQP-EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEG 73
Query: 93 DAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY 151
+ ED+D+AV AR AF G PW +M +R R++ R ADLIE++ LAALET +NGKPY
Sbjct: 74 NKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLYRLADLIERDRTYLAALETLDNGKPY 133
Query: 152 VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211
V S ++ MV++ L YYAGWADK HG T+P DG++ T HEP+GV GQI+PWNFPLL+
Sbjct: 134 VISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM 193
Query: 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALAS 271
WK+ PAL GN +V+K AEQTPLTALYVA L EAG PPGV+N+V G+GPTAGAA+AS
Sbjct: 194 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIAS 253
Query: 272 HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL 331
H VDK++FTG + G ++Q A SNLK VTLELGGKSP II DAD+D AVE AHFAL
Sbjct: 254 HEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFAL 313
Query: 332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
F+NQGQCCCAGSRT+V E VYDEFVE++ ARA R+VG+PF S EQGPQV
Sbjct: 314 FFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQGPQV 364
|
|
| UNIPROTKB|E1BT93 ALDH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 203/352 (57%), Positives = 257/352 (73%)
Query: 34 RGISR-FSTAAVVEEPII-PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAE 91
RG +R S AA P P +I+Y K IN ++ DA S KTFP +P T EVI VAE
Sbjct: 13 RGQARQLSAAAASPIPAPNPSPEIAYNKIFINNEWHDAVSKKTFPTVNPATGEVICQVAE 72
Query: 92 GDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 150
GD D+D+AV AR AF G PW +M R +++ R ADLIE++ LAALET +NGKP
Sbjct: 73 GDKADVDKAVKAARAAFQLGSPWRRMDASHRGKLLNRLADLIERDRAYLAALETLDNGKP 132
Query: 151 YVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 210
Y S ++ MVV+ L Y+AGW+DK HG T+P DG++ T HEP+GV GQI+PWNFPLL
Sbjct: 133 YSISYLVDLDMVVKCLRYFAGWSDKFHGKTIPLDGDFFCYTRHEPVGVCGQIIPWNFPLL 192
Query: 211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA 270
+ WK+ PAL GN +V+K AEQTPL+ALYVA L EAG PPGV+N++ GYGPTAGAA++
Sbjct: 193 MQAWKLGPALATGNVVVMKVAEQTPLSALYVANLIKEAGFPPGVVNIIPGYGPTAGAAIS 252
Query: 271 SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA 330
+HMDVDK++FTG + G ++++ AA+SNLK VTLELGGKSP II DAD+D AV+ AHFA
Sbjct: 253 AHMDVDKVAFTGSTEVGHLIKKAAAESNLKRVTLELGGKSPNIIMSDADMDWAVDQAHFA 312
Query: 331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
LF+NQGQCCCAGSRTYV E +Y+EFVE++ +A R+VG+PF EQGPQV
Sbjct: 313 LFFNQGQCCCAGSRTYVQEDIYNEFVERSVEKAKSRVVGNPFDFKTEQGPQV 364
|
|
| ZFIN|ZDB-GENE-030326-5 aldh2.2 "aldehyde dehydrogenase 2.2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1056 (376.8 bits), Expect = 9.2e-107, P = 9.2e-107
Identities = 200/350 (57%), Positives = 250/350 (71%)
Query: 36 ISRFSTA--AVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGD 93
+ R S+ + + P + P + Y K IN ++ DA S KTFP +P T E+I +VAEGD
Sbjct: 13 VCRISSCQHSTIPAPNVQP-DVHYNKIFINNEWHDAVSKKTFPTINPATGEIICHVAEGD 71
Query: 94 AEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152
D+D+AV AR AF G PW +M +R ++ R AD IE++ LA LET +NGKPY
Sbjct: 72 KADVDKAVKAARDAFKLGSPWRRMDASQRGLLLSRLADCIERDAAYLAELETLDNGKPYA 131
Query: 153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
S +VPMVV+ + YYAGWADK G T+P DGNY T HEPIGV GQI+PWNFPLL+
Sbjct: 132 VSFSVDVPMVVKCMRYYAGWADKWEGKTIPIDGNYFCYTRHEPIGVCGQIIPWNFPLLMQ 191
Query: 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
WK+ PAL GNT+V+K AEQTPLTALY+A L E G P GV+N+V G GPTAGAA+ASH
Sbjct: 192 AWKLGPALATGNTVVMKVAEQTPLTALYIASLIKEVGFPAGVVNIVPGMGPTAGAAIASH 251
Query: 273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
MDVDK++FTG D G ++Q ++ SNLK VTLELGGKSP II DA++++AVE +H ALF
Sbjct: 252 MDVDKVAFTGSTDVGHLIQRASSASNLKKVTLELGGKSPNIILSDANMEEAVEQSHIALF 311
Query: 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+NQGQCCCAG+RT+V E +YDEFVE++ RA RIVGDPF EQGPQV
Sbjct: 312 FNQGQCCCAGTRTFVQESIYDEFVERSVERAKNRIVGDPFDLNTEQGPQV 361
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5074 | 0.8447 | 0.6680 | yes | no |
| Q9SU63 | AL2B4_ARATH | 1, ., 2, ., 1, ., 3 | 0.7427 | 0.9669 | 0.7063 | yes | no |
| P47738 | ALDH2_MOUSE | 1, ., 2, ., 1, ., 3 | 0.5769 | 0.9185 | 0.6955 | yes | no |
| P11884 | ALDH2_RAT | 1, ., 2, ., 1, ., 3 | 0.5769 | 0.9185 | 0.6955 | yes | no |
| P32872 | ALDHY_YEASX | 1, ., 2, ., 1, ., 3 | 0.5090 | 0.8218 | 0.6320 | yes | no |
| Q5RF00 | ALDH2_PONAB | 1, ., 2, ., 1, ., 3 | 0.5753 | 0.9109 | 0.6924 | yes | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5465 | 0.8142 | 0.6438 | yes | no |
| P20000 | ALDH2_BOVIN | 1, ., 2, ., 1, ., 3 | 0.6151 | 0.8371 | 0.6326 | yes | no |
| P05091 | ALDH2_HUMAN | 1, ., 2, ., 1, ., 3 | 0.5753 | 0.9109 | 0.6924 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.6151 | 0.8371 | 0.6314 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 393 | |||
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-162 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-156 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-152 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-150 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-137 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-137 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-137 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-136 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-135 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-132 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-127 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-122 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-121 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-120 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-118 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-118 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-117 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-117 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-112 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-111 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-111 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-110 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-109 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-106 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-106 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-105 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-105 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-104 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-103 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-103 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-102 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-101 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-100 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 6e-99 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 6e-99 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 4e-98 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 4e-96 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-94 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 5e-94 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 3e-93 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 7e-92 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 3e-91 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 3e-89 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 2e-86 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 4e-86 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 2e-85 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-83 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 2e-82 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 6e-82 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 5e-81 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 6e-80 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-78 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 6e-78 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-76 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 3e-76 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 7e-76 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 8e-76 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 7e-74 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 3e-73 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 5e-73 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 2e-71 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 4e-70 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-69 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 7e-69 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 2e-65 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 4e-63 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 5e-62 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 3e-61 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 4e-59 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 1e-57 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 3e-57 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 8e-53 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 7e-52 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-51 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 8e-51 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 2e-50 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 5e-50 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 7e-50 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 5e-48 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 1e-47 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 8e-47 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 4e-45 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 2e-42 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-41 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 1e-40 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 5e-40 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 2e-39 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-38 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 4e-37 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-36 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-35 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 5e-34 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 3e-32 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 5e-32 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 2e-31 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-29 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-27 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 3e-26 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 3e-23 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 6e-19 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 1e-18 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 4e-18 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 2e-15 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 3e-13 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 3e-11 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 3e-10 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 4e-10 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 6e-09 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 2e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 0.001 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 761 bits (1967), Expect = 0.0
Identities = 310/381 (81%), Positives = 343/381 (90%), Gaps = 1/381 (0%)
Query: 3 AARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFST-AAVVEEPIIPPVQISYTKNL 61
AARRIS+LLSRS ++S +LLRS GR R RGI RFST AA VEEPI PPVQ+SYT+ L
Sbjct: 2 AARRISSLLSRSLSASSSALLRSRGRNGGRGRGIRRFSTAAAAVEEPITPPVQVSYTQLL 61
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
INGQFVDAASGKTFP DPRT EVIA+VAEGDAED++RAVA ARKAFDEGPWPKMT YER
Sbjct: 62 INGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYER 121
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
SRI+LR ADL+EK+ +ELAALETW+NGKPY QS K+E+PM RL YYAGWADKIHGLTV
Sbjct: 122 SRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTV 181
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
P DG +H+QTLHEPIGVAGQI+PWNFPLL+F WKV PAL CGNTIVLK+AEQTPL+ALY
Sbjct: 182 PADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYA 241
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
AKL HEAGLPPGVLNVVSG+GPTAGAALASHMDVDKL+FTG DTGKIV ELAAKSNLKP
Sbjct: 242 AKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKP 301
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
VTLELGGKSPFI+ +DADVD+AVELAHFALF+NQGQCCCAGSRT+VHERVYDEFVEKAKA
Sbjct: 302 VTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKA 361
Query: 362 RAMRRIVGDPFKSGVEQGPQV 382
RA++R+VGDPFK GVEQGPQ+
Sbjct: 362 RALKRVVGDPFKKGVEQGPQI 382
|
Length = 538 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 636 bits (1641), Expect = 0.0
Identities = 250/328 (76%), Positives = 289/328 (88%)
Query: 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
+ +TK INGQFVDAASGKTFP DPR EVIA+VAEGDAED+DRAV ARKAFDEGPWP
Sbjct: 1 VKHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWP 60
Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
+MT YERSRI+LR ADL+EK+ +ELAALETW+NGKPY Q+ +EVP+ RL YYAGWAD
Sbjct: 61 RMTGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWAD 120
Query: 175 KIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
KIHG+T+P DG +H+ TLHEPIGV GQI+PWNFPLL+F WKV PAL CGNTIVLK AEQT
Sbjct: 121 KIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQT 180
Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
PL+AL AKL EAGLP GVLN+V+G+GPTAGAA+ASHMDVDK++FTG + GKI+ +LA
Sbjct: 181 PLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240
Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
AKSNLKPVTLELGGKSPFI+ +DADVD+AVELAHFALF+NQGQCCCAGSRT+VHE +YDE
Sbjct: 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE 300
Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQV 382
FVEKAKARA++R+VGDPF+ GVEQGPQV
Sbjct: 301 FVEKAKARALKRVVGDPFRKGVEQGPQV 328
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 574 bits (1482), Expect = 0.0
Identities = 205/325 (63%), Positives = 250/325 (76%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
T IN +FVD+ SGKTFP +P T EVI VAE D ED+D AV AR AF+ G W KM
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
P ER R++ + ADLIE++ +ELAALE+ +NGKP +S K +V + ++ L YYAGWADKI
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
G T+P DGN+ T EPIGV GQI+PWNFPLL+ WK+APAL GNT+VLK AEQTPL+
Sbjct: 124 GKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
ALY+A+L EAG PPGV+N+V G+GPTAGAA++SHMDVDK++FTG G+ + E AAKS
Sbjct: 184 ALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
NLK VTLELGGKSP I+FDDAD+D+AVE A F +F+NQGQCCCAGSR +V E +YDEFVE
Sbjct: 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVE 303
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQV 382
K KARA +R+VGDPF QGPQV
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQV 328
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 538 bits (1388), Expect = 0.0
Identities = 199/331 (60%), Positives = 251/331 (75%), Gaps = 1/331 (0%)
Query: 53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG- 111
+I YTK IN ++ D+ SGKTFP +P T E I V EGD D+D+AV AR AF G
Sbjct: 2 PEIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGS 61
Query: 112 PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171
PW M ER R++ + ADLIE++ LA+LET +NGKP+ +S ++P +++L YYAG
Sbjct: 62 PWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAG 121
Query: 172 WADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
WADKIHG T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+APAL CGNT+VLK A
Sbjct: 122 WADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPA 181
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
EQTPLTALY+A L EAG PPGV+NVV GYGPTAGAA++SH D+DK++FTG + GK++Q
Sbjct: 182 EQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
+ A KSNLK VTLELGGKSP I+F DAD+D AVE AH ALF+N GQCCCAGSRT+V E +
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
YDEFV+++ RA +R+VG+PF EQGPQ+
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQI 332
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 465 bits (1199), Expect = e-162
Identities = 195/329 (59%), Positives = 241/329 (73%)
Query: 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPW 113
+I +TK ING+FVDAASGKTF DPRT EVIA +AEGD ED+D AV AR+AFD GPW
Sbjct: 17 EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPW 76
Query: 114 PKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA 173
P+M+ +ER RIM++ ADLIE+++EELAAL+T + GK + ++P LL YYAG A
Sbjct: 77 PRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAA 136
Query: 174 DKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
DKIHG T+ TL EPIGV G I+PWNFP +F KVAPAL G T+V+K AEQ
Sbjct: 137 DKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196
Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
TPL+AL+ A L AG+P GV+NVV+G+GPTAGAA+ASHMDVDK+SFTG + G+ + +
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
AA SNLK V+LELGGKSP +IFDDADVD AV+LA +FYN+G+ C A SR YV E +YD
Sbjct: 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYD 316
Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
EFV+K +A +VGDPF QGPQV
Sbjct: 317 EFVKKLVEKAKDWVVGDPFDPRARQGPQV 345
|
Length = 501 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 448 bits (1155), Expect = e-156
Identities = 174/317 (54%), Positives = 210/317 (66%), Gaps = 5/317 (1%)
Query: 66 FVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIM 125
+VD+ S +T V +P T EVIA V AED+D AVA AR AF W K P ER+ I+
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKA--WAKTPPSERAAIL 57
Query: 126 LRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG 185
L+AADL+E+ +ELA LET GKP ++ + EVP + L YYAG A K+ G T+P D
Sbjct: 58 LKAADLLEERRDELAELETLETGKPLAEA-RGEVPRAIDTLRYYAGLARKLEGETLPSDP 116
Query: 186 NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLF 245
T EP+GV G I PWNFPLLL WK+APAL GNT+VLK +E TPLTAL +A+LF
Sbjct: 117 GVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELF 176
Query: 246 HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLE 305
EAGLPPGVLNVV+G G G AL H DVDK+SFTG + G+ + + AAK NLK VTLE
Sbjct: 177 EEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAK-NLKRVTLE 235
Query: 306 LGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 365
LGGK+P I+FDDAD+D AVE A F F N GQ C AGSR VHE +YDEFVE+ A
Sbjct: 236 LGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKS 295
Query: 366 RIVGDPFKSGVEQGPQV 382
VGDP + GP +
Sbjct: 296 LKVGDPLDPDTDIGPLI 312
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 438 bits (1129), Expect = e-152
Identities = 166/322 (51%), Positives = 216/322 (67%), Gaps = 3/322 (0%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
IN +FV ++ G+T +P T EVIA+V ED+D+AV ARKAF E W K+T ER
Sbjct: 12 INNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAF-ESWWSKVTGEER 70
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
++ + ADL+EKN + LAA+E ++GKPY + ++ ++ ++ YYAGWADKI G T+
Sbjct: 71 GELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTI 130
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
P N TLHEP GV GQI+PWN+PL + WK+APAL GNT+V+K AE TPL+ LY
Sbjct: 131 PTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYF 190
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
A L EAG PPGV+N++ GYG AG+ALA H DVDK++FTG TG++V + AA NLK
Sbjct: 191 ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA-QNLKA 249
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
VTLE GGKSP ++F+DAD+DQAV+ A + YN GQ C A SR YV E +YD+FVEK
Sbjct: 250 VTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVE 309
Query: 362 RAMRR-IVGDPFKSGVEQGPQV 382
+ VG PF GPQV
Sbjct: 310 HVKQNYKVGSPFDDDTVVGPQV 331
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 432 bits (1113), Expect = e-150
Identities = 172/322 (53%), Positives = 221/322 (68%), Gaps = 2/322 (0%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP-KMTPYE 120
ING+FVD+ G T VY+P T ++I +AE D+D AV A AF E W K++ +
Sbjct: 11 INGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAF-ETDWGLKVSGSK 69
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R R + + ADL+E+N++ LA++E +NGK + + + +V YY GWADKIHG
Sbjct: 70 RGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQV 129
Query: 181 VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
+ D T HEPIGV GQI+PWNFPLL+ WK+APAL GNTIVLK +E TPL+ALY
Sbjct: 130 IETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALY 189
Query: 241 VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300
+ KL EAG PPGV+NVVSGYG T G A++SHMD+DK++FTG G+ V E AAKSNLK
Sbjct: 190 MTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLK 249
Query: 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360
VTLELGGKSP I+FDDAD++ AV + +F+N GQ CCAGSR YV E +YD+FV++ K
Sbjct: 250 KVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFK 309
Query: 361 ARAMRRIVGDPFKSGVEQGPQV 382
+A + VGDPF QGPQV
Sbjct: 310 EKAKKLKVGDPFAEDTFQGPQV 331
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 400 bits (1031), Expect = e-137
Identities = 167/325 (51%), Positives = 207/325 (63%), Gaps = 6/325 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
K LI+G++VD AS T V +P T EVIA V AED+D AVA AR AF+ W +++
Sbjct: 1 YKLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLS 56
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ER+ I+ R ADL+E EELAAL T GKP ++ + E+ + YYA A ++
Sbjct: 57 AEERAAILRRIADLLEARAEELAALITLETGKPISEA-RGEIARAADFIRYYAEEARRLE 115
Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
G T+P D EP+GV G I PWNFPL L WK+APAL GNT+VLK +EQTPL+
Sbjct: 116 GETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLS 175
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
AL +A+L EAGLP GVLNVV+G G G AL +H DVD +SFTG G+ + AA
Sbjct: 176 ALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA- 234
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
NLKPVTLELGGKSP I+ +DAD+D AV+ A F F+N GQ C A SR VHE VYDEFVE
Sbjct: 235 NLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVE 294
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQV 382
+ ARA VGDP + GP +
Sbjct: 295 RLVARAASLKVGDPLDPSTDLGPLI 319
|
Length = 472 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 400 bits (1029), Expect = e-137
Identities = 159/312 (50%), Positives = 201/312 (64%), Gaps = 1/312 (0%)
Query: 72 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADL 131
G+TF +P T V+A VA DA D+DRAVA AR+AF+ G W +++P ER ++LR ADL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 132 IEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQT 191
IE + +ELA LET + GKP +L +VP +YA DK++G P +
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALI 120
Query: 192 LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP 251
EP+GV G +VPWNFPLL+ WK+APAL GN++VLK AEQ+PLTAL +A+L EAGLP
Sbjct: 121 TREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLP 180
Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
GVLNVV G+G TAG AL HMDVD L+FTG + G+ E + +SNLK V LE GGKSP
Sbjct: 181 AGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240
Query: 312 FIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370
I+F DA D+D A E A +F+NQG+ C AGSR VHE + DEF+EK A A GD
Sbjct: 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGD 300
Query: 371 PFKSGVEQGPQV 382
P G V
Sbjct: 301 PLDPATRMGALV 312
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 398 bits (1026), Expect = e-137
Identities = 160/311 (51%), Positives = 199/311 (63%), Gaps = 7/311 (2%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
+P T E A V E A D+DRAVA AR AF+ G W K+TP ER +++ R ADLIE N
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEP 195
EELA LET +NGK ++ +++V + YYAG ADKI G +P D G+Y T EP
Sbjct: 61 EELAELETRDNGKLIRET-RAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREP 119
Query: 196 IGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL 255
+GV I PWN PLLL K+APAL GNT+VLK +E TP + L +AKL EAG PPGV+
Sbjct: 120 LGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVV 179
Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315
NVV+G+GP G AL H V K++FTG +TG+ + AA+ NL PVTLELGGKSP I+F
Sbjct: 180 NVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF 238
Query: 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK--AKARAMRRIVGDPFK 373
DDAD+D AV +F GQ C AGSR V +YDEFVE+ A+ARA+R VGDP
Sbjct: 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIR--VGDPLD 296
Query: 374 SGVEQGPQVLF 384
+ GP
Sbjct: 297 PETQMGPLATE 307
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 398 bits (1026), Expect = e-136
Identities = 154/326 (47%), Positives = 205/326 (62%), Gaps = 4/326 (1%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I+G++V+AASGKT + +P EVIA V EG AED RA+A AR+AFD G WP + ER
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
+ ++ R AD I ++ EELA LET N GK +S + ++ V YYAG A K G
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEVY 120
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
+ +T+ EP+GV G I PWN+PLL WK+APAL GNT+V+K +E TPLT + +
Sbjct: 121 DVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
+L EAGLP GV+N+V+G G T GA LA DVD +SFTG TG+ + AA N+K
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVKK 239
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
V LELGGK+P I+F DAD + AV+ A +F+N GQ C AGSR V E ++D+FV
Sbjct: 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAE 299
Query: 362 RAMRRIVGDPFKSGVEQGPQVLFSAD 387
RA + +G+ + E GP L SA+
Sbjct: 300 RAKKIKLGNGLDADTEMGP--LVSAE 323
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 393 bits (1011), Expect = e-135
Identities = 154/286 (53%), Positives = 183/286 (63%), Gaps = 5/286 (1%)
Query: 98 DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
D AVA AR AF W + P ER+ I+ + ADL+E+ EELAALET GKP ++L
Sbjct: 1 DAAVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALG- 57
Query: 158 EVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216
EV YYAG A ++HG +P D EP+GV G I PWNFPLLL WK+
Sbjct: 58 EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKL 117
Query: 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 276
APAL GNT+VLK +E TPLTAL +A+L EAGLPPGVLNVV+G G GAALASH VD
Sbjct: 118 APALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVD 177
Query: 277 KLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336
K+SFTG GK + AA+ NLK VTLELGGKSP I+FDDAD+D AV+ A F F N G
Sbjct: 178 KISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236
Query: 337 QCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
Q C A SR VHE +YDEFVE+ R VG+P + GP +
Sbjct: 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLI 282
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 386 bits (995), Expect = e-132
Identities = 151/306 (49%), Positives = 202/306 (66%), Gaps = 3/306 (0%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
++P T EV+A V EG A ++D AVA A++AF W +M+P ER+RI+ + ADLIE
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARA 58
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
+ELA LE+ + GKP + ++P ++A + ++ G + P DG L +P+
Sbjct: 59 DELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPV 118
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
GVAG I PWN PL+L TWK+APAL GNT+VLK +E TPLTA +A+L +EAGLPPGV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178
Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
VV G+GP AGAAL +H DVD +SFTG TG+ + AA NLKPV+LELGGK+P I+F
Sbjct: 179 VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFA 237
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376
DAD+D+AV+ A + F N G+ C AGSR V +YDEF+E+ RA VGDP
Sbjct: 238 DADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDT 297
Query: 377 EQGPQV 382
E GP +
Sbjct: 298 EVGPLI 303
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 374 bits (961), Expect = e-127
Identities = 164/305 (53%), Positives = 200/305 (65%), Gaps = 5/305 (1%)
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
+P T E+IA VA+ AED+D AVA AR AF+ W M P ER RI+ R A+LI N +E
Sbjct: 3 NPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADE 60
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGV 198
LA LE+ + GKP + + +VP YYAGWADKI G +P G + T+ EP+GV
Sbjct: 61 LARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGV 120
Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
G IVPWNFPL+ WKVAPAL GNT+VLK AE TPL+AL +A+L EAG P GVLNVV
Sbjct: 121 VGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVV 180
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTG-KIVQELAAKSNLKPVTLELGGKSPFIIFDD 317
+G+G AGAAL H DVDK++FTG G KI+Q A NLK V+LELGGKS I+F D
Sbjct: 181 TGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQ--GAAGNLKRVSLELGGKSANIVFAD 238
Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
AD+D AV A +FYNQGQ C AGSR VHE +YDEF+E+ + A GDP +
Sbjct: 239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQ 298
Query: 378 QGPQV 382
GP V
Sbjct: 299 MGPLV 303
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 362 bits (931), Expect = e-122
Identities = 147/293 (50%), Positives = 191/293 (65%), Gaps = 3/293 (1%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V+DP T EV A +A G A D+DRAV AR+AF E W +++P ER R++LR A LI ++
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAF-ESGWLRLSPAERGRLLLRIARLIREHA 59
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
+ELA LE+ + GKP Q+ +++V R YY G ADK+HG T+P Y + T+ EP
Sbjct: 60 DELARLESLDTGKPLTQA-RADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPH 118
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
GV G I+PWN+PL + VAPAL GN +V+K AE PLTAL +A+L EAGLP G LN
Sbjct: 119 GVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALN 178
Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
VV+G G AGAAL +H VD +SFTG +TG V AA+ N+ PVTLELGGKSP I+F
Sbjct: 179 VVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVFA 237
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369
DAD++ A+ + A+ N GQ C AGSR VH +YDE +E+ R VG
Sbjct: 238 DADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG 290
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 354 bits (911), Expect = e-121
Identities = 144/261 (55%), Positives = 171/261 (65%), Gaps = 5/261 (1%)
Query: 102 ATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPM 161
A AR AF W + P ER+ I+ + ADL+E+ EELAALET GKP ++L EV
Sbjct: 1 AAARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVAR 57
Query: 162 VVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL 220
+ Y AG ADK+ G +P D EP+GV G I PWNFPLLL WK+APAL
Sbjct: 58 AIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPAL 117
Query: 221 TCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSF 280
GNT+VLK +E TPLTAL +A+L EAGLPPGV+NVV G G GAAL SH VDK+SF
Sbjct: 118 AAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISF 177
Query: 281 TGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCC 340
TG GK + + AA+ NLKPVTLELGGKSP I+ +DAD+D AVE A F F+N GQ C
Sbjct: 178 TGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICT 236
Query: 341 AGSRTYVHERVYDEFVEKAKA 361
A SR VHE +YDEFVEK
Sbjct: 237 AASRLLVHESIYDEFVEKLVT 257
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 356 bits (916), Expect = e-120
Identities = 144/329 (43%), Positives = 195/329 (59%), Gaps = 9/329 (2%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
N ING++V + G+ F Y+P +V+ + AED+D AV A +AF W K +
Sbjct: 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKT--WGKTSV 59
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ER+ I+ + AD IE+N+E LA ET +NGKP ++L +++P+ + Y+AG G
Sbjct: 60 AERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEG 119
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
D + HEP+GV GQI+PWNFPLL+ WK+APAL GNT+VLK A QTPL+
Sbjct: 120 SLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
L + +L + LP GV+NVV+G+G AG LASH + KL+FTG G+++ + AA+ N
Sbjct: 180 LVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237
Query: 299 LKPVTLELGGKSPFIIFDDA-----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
L PVTLELGGKSP I FDDA D D E +NQG+ C SR V E +YD
Sbjct: 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYD 297
Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
EF+E+A R VG+P G QV
Sbjct: 298 EFIERAVERFEAIKVGNPLDPETMMGAQV 326
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 352 bits (904), Expect = e-118
Identities = 149/324 (45%), Positives = 206/324 (63%), Gaps = 4/324 (1%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
ING+FVDA GKT+ +P VI V+ ED+DRAVA A++AF+ G W KM +R
Sbjct: 10 INGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDR 69
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
R+M R ADL+E++ EELA +E+ ++G Y +LK+ V M ++ Y+AGW DKI G T+
Sbjct: 70 GRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTI 129
Query: 182 P---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
P N ++ T EPIGV G ++PWN+PL++ WK+A L GNT+VLK A+ TPLT
Sbjct: 130 PINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLT 189
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
AL A+L +AG P GV+N++ G G G L+ H DV KL FTG GK + + A S
Sbjct: 190 ALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVS 249
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
NLK V+LELGGKSP IIF D D+D+AV + ++F+N+G+ C A R +V E ++DEFV
Sbjct: 250 NLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVR 309
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQ 381
+ + +GDP + GPQ
Sbjct: 310 RVVEEVKKMKIGDPLDRSTDHGPQ 333
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 350 bits (901), Expect = e-118
Identities = 143/324 (44%), Positives = 194/324 (59%), Gaps = 4/324 (1%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
I+G +V+A SG+TF V +P T EV+A V D++ AVA+A++ W MT
Sbjct: 8 SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKI--WAAMTA 65
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ERSRI+ RA D++ + +ELAALET + GKP ++ ++ +L YYAG A + G
Sbjct: 66 MERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEG 125
Query: 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+P G + T EP+GV I WN+P+ + WK APAL GN ++ K +E TPLTA
Sbjct: 126 EQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
L +A+++ EAGLP GV NVV G G GA L H D+ K+SFTG TGK V AA S
Sbjct: 186 LKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS- 243
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
LK VT+ELGGKSP I+FDDAD+D+A ++A A FY+ GQ C G+R +V + + F +
Sbjct: 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEAR 303
Query: 359 AKARAMRRIVGDPFKSGVEQGPQV 382
R R +GDP GP V
Sbjct: 304 LLERVERIRIGDPMDPATNFGPLV 327
|
Length = 488 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 349 bits (898), Expect = e-117
Identities = 153/330 (46%), Positives = 197/330 (59%), Gaps = 14/330 (4%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
TK LING+ V A G+ PVY+P T EV+A +AE A +D AVA A AF E W + T
Sbjct: 3 TKLLINGELV-AGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQTT 59
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
P ER+ +L+ AD IE+N +E A LE+ N GKP +L E+P +V + ++AG A +
Sbjct: 60 PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119
Query: 178 GLTVPGDGNY---HIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
G G Y H + +P+GV I PWN+PL++ WK+APAL GNT+VLK +E
Sbjct: 120 GKAA---GEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEI 176
Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
TPLTAL +A+L + LPPGVLNVV+G G T G AL H V +S TG TGK V
Sbjct: 177 TPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSA 235
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
AA S +K LELGGK+P I+FDDAD+D VE +YN GQ C A R Y +YD
Sbjct: 236 AADS-VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYD 294
Query: 354 EFVEKAKARAMRRI-VGDPFKSGVEQGPQV 382
+ V K A A+ + VGDP E GP +
Sbjct: 295 DLVAKL-AAAVATLKVGDPDDEDTELGPLI 323
|
Length = 475 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 347 bits (893), Expect = e-117
Identities = 138/307 (44%), Positives = 184/307 (59%), Gaps = 9/307 (2%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V +P T EVI V + A D D A+ A AF W K T ER+ I+ R ADLI +
Sbjct: 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKT--WRKTTARERAAILRRWADLIRERA 58
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEP 195
E+LA L T GKP ++ + EV L ++A A +I+G T+P I + +P
Sbjct: 59 EDLARLLTLEQGKPLAEA-RGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQP 117
Query: 196 IGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL 255
+GV I PWNFP + T K+APAL G T+VLK AE+TPL+AL +A+L EAGLP GVL
Sbjct: 118 VGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVL 177
Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315
NVV+G G AL + V K+SFTG GK++ AA +K V+LELGG +PFI+F
Sbjct: 178 NVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVF 236
Query: 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK--AKARAMRRIVGDPFK 373
DDAD+D+AV+ A + F N GQ C +R YVHE +YDEFVEK + + ++ VG+
Sbjct: 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLK--VGNGLD 294
Query: 374 SGVEQGP 380
G + GP
Sbjct: 295 EGTDMGP 301
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 337 bits (866), Expect = e-112
Identities = 150/321 (46%), Positives = 207/321 (64%), Gaps = 14/321 (4%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
ING++V + K+FP +P T EV+A+V + + ED+D AVA AR AF+ W + + R
Sbjct: 26 INGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGHVR 83
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
+R + R A I+K+ A LE+ +NGKP +S ++P+V R +++AGWA + +
Sbjct: 84 ARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-EL 142
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
G +P+GV GQIVPWNFPLL+ WK+ PAL GNT+VLK AE TPLTAL
Sbjct: 143 AG---------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLF 193
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
A++ EAGLPPGVLN+V+G G G+ALA+H VDK++FTG + G+ ++ A + K
Sbjct: 194 AEICAEAGLPPGVLNIVTGNGSF-GSALANHPGVDKVAFTGSTEVGRALRRATAGTG-KK 251
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
++LELGGKSPFI+FDDAD+D AVE A+++NQGQ CCAGSR V E V +E + K K
Sbjct: 252 LSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKE 311
Query: 362 RAMRRIVGDPFKSGVEQGPQV 382
R VGDP ++ G V
Sbjct: 312 RMSHLRVGDPLDKAIDMGAIV 332
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 332 bits (854), Expect = e-111
Identities = 143/322 (44%), Positives = 188/322 (58%), Gaps = 5/322 (1%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
ING+FV ++SG+T V +P T EV+A V AED DRAV A A W ++ ER
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIER 59
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
+ + + ADLI +N +ELA L GK + + EV + Y A WA +I G +
Sbjct: 60 AAYLRKLADLIRENADELAKLIVEEQGKT-LSLARVEVEFTADYIDYMAEWARRIEGEII 118
Query: 182 PGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
P D N +I PIGV I+PWNFP L K+APAL GNTIV+K +E+TPL AL
Sbjct: 119 PSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALE 178
Query: 241 VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300
A+L EAGLP GVLN+V+G G G AL +H V +S TG + G+ + E AA+ N+
Sbjct: 179 FAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NIT 237
Query: 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360
V+LELGGK+P I+ DAD+D AV+ + N GQ C R YVHE +YDEF+EK
Sbjct: 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLV 297
Query: 361 ARAMRRIVGDPFKSGVEQGPQV 382
+ VGDPF + + GP V
Sbjct: 298 EKMKAVKVGDPFDAATDMGPLV 319
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 332 bits (854), Expect = e-111
Identities = 141/322 (43%), Positives = 197/322 (61%), Gaps = 4/322 (1%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
ING++V +SG+T Y+P E ++ + + D+DRAV A++AF W K T E
Sbjct: 4 FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKT--WRKTTVAE 61
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R+ I+ + AD+I++N E LA +ET +NGKP ++ ++P+ Y+AG G
Sbjct: 62 RANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSA 121
Query: 181 VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
D + L EPIGV GQI+PWNFP L+ WK+APAL GNT+V+K + T L+ L
Sbjct: 122 NMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLE 181
Query: 241 VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300
+AK+ + LP GV+N+V+G G +G L +H +DKL+FTG + G+ V AAK L
Sbjct: 182 LAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-KLI 239
Query: 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360
P TLELGGKS IIFDDA+ D+A+E A + +NQGQ CCAGSR +V E +YDEFV K K
Sbjct: 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLK 299
Query: 361 ARAMRRIVGDPFKSGVEQGPQV 382
+ VG+P + G QV
Sbjct: 300 EKFENVKVGNPLDPDTQMGAQV 321
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 331 bits (851), Expect = e-110
Identities = 142/321 (44%), Positives = 201/321 (62%), Gaps = 3/321 (0%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I+G++V+ ++G T + +P EVIA V ED++RA+A AR+A E W M+P ER
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGE--WAAMSPMER 59
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
RI+ RAADLI + EELA LET + GK +++ +++ + ++AG A ++G +
Sbjct: 60 GRILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEII 119
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
P G T+ EP+GV I WN+PL + +WK+APAL GN +V K +E TPLTAL V
Sbjct: 120 PLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
A++ EAGLP GV NVV G G G L +H DV K+SFTG TGK + AA +LK
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMA-AAAGHLKH 238
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
VT+ELGGKSP I+FDDAD++ AV+ A F++ GQ C G+R +VH+++ + F+ +
Sbjct: 239 VTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVE 298
Query: 362 RAMRRIVGDPFKSGVEQGPQV 382
R R +GDPF E GP +
Sbjct: 299 RTERIKLGDPFDEATEMGPLI 319
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 328 bits (844), Expect = e-109
Identities = 140/306 (45%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V +P T EV+A V AED+D AV +A+ A E W + ER RI+ +AADL+ +
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERN 58
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
+E+A LET +NGKP + + ++ L YYAG A + G VP G T EP+
Sbjct: 59 DEIARLETIDNGKPI-EEARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPL 117
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
GV I WN+P+ + +WK APAL CGN +V K + TPLTAL +A++ EAGLP GV N
Sbjct: 118 GVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFN 177
Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
VV G G T G L H DV K+SFTG TGK V AAK +K VTLELGGKSP IIFD
Sbjct: 178 VVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376
DAD++ AV A A F +QGQ C G+R +V + DEF E+ R + +GDP
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295
Query: 377 EQGPQV 382
+ G +
Sbjct: 296 QMGALI 301
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 322 bits (827), Expect = e-106
Identities = 139/316 (43%), Positives = 193/316 (61%), Gaps = 1/316 (0%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+ ING++ AA +TF DP T +A +A G + DIDRAV+ AR F+ G W +
Sbjct: 20 NRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSS 79
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
P +R ++ + ADL+E + EELA LET + GKP SL+ ++P R + +YA DK++
Sbjct: 80 PAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVY 139
Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
G + + EP+GV IVPWNFPLLL WK+ PAL GN+++LK +E++PL+
Sbjct: 140 GEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLS 199
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
A+ +A L EAGLP GVLNVV+G+G AG AL+ H D+D ++FTG TGK + + A S
Sbjct: 200 AIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS 259
Query: 298 NLKPVTLELGGKSPFIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
N+K V LE GGKS I+F D D+ QA +FYNQGQ C AG+R + E + DEF+
Sbjct: 260 NMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFL 319
Query: 357 EKAKARAMRRIVGDPF 372
K +A G P
Sbjct: 320 ALLKQQAQNWQPGHPL 335
|
Length = 494 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 319 bits (820), Expect = e-106
Identities = 134/326 (41%), Positives = 184/326 (56%), Gaps = 8/326 (2%)
Query: 59 KNLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+N I+G++V G+ +P T++V+ A AED D A+A A AF W + +
Sbjct: 2 RNYIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPA--WRRTS 57
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
P R+ I+ +A D +E EELA L T GK ++ + EV ++ YYAG A ++
Sbjct: 58 PEARADILDKAGDELEARKEELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLS 116
Query: 178 GLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G T+P ++T EP+GV G I PWNFP+ + WK+APAL GNT+V K AE TP
Sbjct: 117 GETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPA 176
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
+A + ++ EAGLP GV N+V G G G AL H DVD +SFTG G+ + AA
Sbjct: 177 SAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAA- 235
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+ V LE+GGK+P ++ DDAD+D AVE A F++ GQ C A SR V E ++D FV
Sbjct: 236 ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFV 295
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQV 382
E R VGD GV+ GP V
Sbjct: 296 EALVERTKALKVGDALDEGVDIGPVV 321
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 318 bits (817), Expect = e-105
Identities = 153/308 (49%), Positives = 182/308 (59%), Gaps = 11/308 (3%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V DP T E IA V + A D+D AVA A AF W + TP ERS+ +L+ AD IE+N
Sbjct: 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENA 58
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNY---HIQTL- 192
EELAALE+ N GKP E+P V ++AG A + G P G Y H +
Sbjct: 59 EELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEG---PAAGEYLPGHTSMIR 115
Query: 193 HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP 252
EPIGV QI PWN+PL++ WK+APAL GNT+VLK +E TPLT L +A+L E LPP
Sbjct: 116 REPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPP 174
Query: 253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF 312
GV+NVV G G +AG AL +H V +S TG TGK V AA LK V LELGGK+P
Sbjct: 175 GVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPV 233
Query: 313 IIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372
I+FDDAD+D AV A +YN GQ C A R YVHE VYDEFV VGDP
Sbjct: 234 IVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPD 293
Query: 373 KSGVEQGP 380
E GP
Sbjct: 294 DEDTEMGP 301
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 318 bits (817), Expect = e-105
Identities = 146/310 (47%), Positives = 191/310 (61%), Gaps = 8/310 (2%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V +P T I + AED+D AV AR+AF W K T ER++ + A+ + +
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERR 58
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH---GLTVP-GDGNYHIQTL 192
EELA LE +NGKP ++ +V V YYA A+++ VP ++ +
Sbjct: 59 EELAELEARDNGKPLDEAA-WDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVR 117
Query: 193 HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP 252
EP+GV G I PWNFPLL+ WKVAPAL G T+VLK +E T LT L +A++ EAGLPP
Sbjct: 118 REPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPP 177
Query: 253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF 312
GVLNVV+G G AGA LA+H +DK+SFTG TG V + AA+ ++KPV+LELGGKSP
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236
Query: 313 IIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372
I+FDDAD+++AVE A F F+N GQ C A SR VHE + D F+E+ A VGDP
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296
Query: 373 KSGVEQGPQV 382
+ GV GP V
Sbjct: 297 EEGVRLGPLV 306
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 315 bits (808), Expect = e-104
Identities = 142/330 (43%), Positives = 197/330 (59%), Gaps = 16/330 (4%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
+ I+G+FV + SG+TF P T EV+ +VA G A D+DRA A++AF W ++
Sbjct: 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKR--WAELKA 59
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK--- 175
ER R + + ADLIE++ +E+A LE + G+P Q+ + V+R + +ADK
Sbjct: 60 AERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQ----QVIRAAENFRFFADKCEE 115
Query: 176 -IHGLTVPGDG--NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
+ G T P D NY T+ P+G G I PWN P +L TWK+APAL GNT+VLK AE
Sbjct: 116 AMDGRTYPVDTHLNY---TVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAE 172
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
+PLTA +A++ EAGLP GV N+V G+G AG AL +H DV +SFTG TG I+
Sbjct: 173 WSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMR 232
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
A + LK ++ELGGKSP I+FDDAD+++A++ F +F G+ C A SR V E +
Sbjct: 233 NGADT-LKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIA 291
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
++FVEK R VG P E GP +
Sbjct: 292 EDFVEKLVERVRAIRVGHPLDPETEVGPLI 321
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = e-103
Identities = 139/322 (43%), Positives = 174/322 (54%), Gaps = 3/322 (0%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I G++V + +T V P T EV+ V E D+D AVA AR+AFD GPWP+++P ER
Sbjct: 3 IGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAER 62
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
+ ++ R AD +E +ELA L T NG P S +++ P LL YYA A
Sbjct: 63 AAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEER 122
Query: 182 -PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
PG G H+ EP+GV IVPWN PL L K+APAL G T+VLK + +TPL A
Sbjct: 123 RPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYL 182
Query: 241 VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300
+A+ EAGLPPGV+NVV G L H VDK+SFTG G+ + + L
Sbjct: 183 LAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ERLA 240
Query: 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360
VTLELGGKS I+ DDAD+D AV A N GQ C A +R V YDE VE
Sbjct: 241 RVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALA 300
Query: 361 ARAMRRIVGDPFKSGVEQGPQV 382
A VGDP + GP
Sbjct: 301 AAVAALKVGDPLDPATQIGPLA 322
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 312 bits (801), Expect = e-103
Identities = 136/321 (42%), Positives = 175/321 (54%), Gaps = 7/321 (2%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I+G +V A +T V +P T EVI V G A D+DRAVA AR+AF W + ER
Sbjct: 3 IDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEER 60
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
+ ++ R A+ E +ELA T G P + ++V + + L A
Sbjct: 61 AALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER 120
Query: 182 PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241
G N + + EPIGV G I PWN+PL KVAPAL G T+VLK +E PL+A+ +
Sbjct: 121 RG--NSLV--VREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIIL 176
Query: 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
A++ EAGLP GV N+V+G GP G AL++H DVD +SFTG GK V E AA + +K
Sbjct: 177 AEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-VKR 235
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
V LELGGKS II DDAD+++AV A F N GQ C A +R V Y E E A A
Sbjct: 236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAA 295
Query: 362 RAMRRIVGDPFKSGVEQGPQV 382
A +VGDP GP
Sbjct: 296 AAEAYVVGDPRDPATTLGPLA 316
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 310 bits (795), Expect = e-102
Identities = 154/325 (47%), Positives = 187/325 (57%), Gaps = 9/325 (2%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I+G+ V S K + +P T +VIA+VA D+D AVA+A +AF W K TP ER
Sbjct: 4 IDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV-SAWAKTTPAER 62
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
RI+LR ADLIE++ EELA LET +GK S EV L Y+AGWA KI+G T+
Sbjct: 63 GRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETL 122
Query: 182 ------PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
Y T EP+GV IVPWNF +++ WK+ AL G TIV+K +E TP
Sbjct: 123 APSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTP 182
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
LT L VA+L EAG+P GVLNVV+G G GA L SH DV K+SFTG TGK + AA
Sbjct: 183 LTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKIGRQAA 241
Query: 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
S+L VTLELGGK+ DAD+D VE A F +QGQ C A R YVH +DE
Sbjct: 242 -SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDEL 300
Query: 356 VEKAKARAMRRIVGDPFKSGVEQGP 380
V K K VG P V GP
Sbjct: 301 VTKLKQALSSFQVGSPMDESVMFGP 325
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = e-101
Identities = 141/302 (46%), Positives = 187/302 (61%), Gaps = 5/302 (1%)
Query: 80 PRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL 139
P V+A AEG ED+D AVA ARKAFD+GPWP+M+ ER+ ++L+ ADLI E L
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP--GDGNYHIQTLHEPIG 197
A +ET +GKP Q+ + E+ L Y A A +HG + GD + L EPIG
Sbjct: 64 ALIETLESGKPISQA-RGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGL-VLREPIG 121
Query: 198 VAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNV 257
V G I PWNFP L+ + K+ AL G T+V+K +E T T L +A+L EAGLP GV+N+
Sbjct: 122 VVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNI 181
Query: 258 VSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD 317
V+GYG T G A+ H DVD +SFTG GK + AA+ NLK V+LELGGK+P I+F D
Sbjct: 182 VTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFAD 240
Query: 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377
AD+D A + F +++N G+CC +GSR VHE + D FV AR+ + VGDP +
Sbjct: 241 ADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETK 300
Query: 378 QG 379
G
Sbjct: 301 VG 302
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 306 bits (785), Expect = e-100
Identities = 135/296 (45%), Positives = 179/296 (60%), Gaps = 5/296 (1%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V +P T +VI V A D+DRAVA A+ AF W ER +++ R AD +E
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARS 58
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
EELA L G + E ++ L Y+ G A ++ G T+P + T+ EP+
Sbjct: 59 EELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPL 118
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
GV G I+PWN PL+L K+APAL GNT+VLK+AE PL L +A++ + LP GVLN
Sbjct: 119 GVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLN 177
Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
V++GYG GAAL H DVDK++FTG + GKI+ AA L PV+LELGGKSP I+F
Sbjct: 178 VITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVFP 236
Query: 317 DADVDQAVELAHFAL-FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
DAD+D AV+ A + F QGQ C AGSR +VHE +YD F+EK A+ + +GDP
Sbjct: 237 DADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDP 292
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 302 bits (775), Expect = 6e-99
Identities = 140/330 (42%), Positives = 193/330 (58%), Gaps = 13/330 (3%)
Query: 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
N I G++V G+ F P T +V V AEDI+ A+ A A + W K +
Sbjct: 3 NFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVA 60
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
ER+ I+ + AD +E N+E LA ETW+NGKP ++L +++P+ + Y+AG G
Sbjct: 61 ERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGS 120
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
D N HEP+GV GQI+PWNFPLL+ TWK+APAL GN +VLK AEQTP + L
Sbjct: 121 ISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASIL 180
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+ +L + LPPGV+NVV+G+G AG LAS + K++FTG TG+++ + A++ N+
Sbjct: 181 VLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-NI 238
Query: 300 KPVTLELGGKSPFIIF------DDADVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVY 352
PVTLELGGKSP I F DDA D+A+E FAL NQG+ C SR + E +Y
Sbjct: 239 IPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL--NQGEVCTCPSRALIQESIY 296
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
D F+E+A R G+P + G Q
Sbjct: 297 DRFMERALERVKAIKQGNPLDTETMIGAQA 326
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 301 bits (774), Expect = 6e-99
Identities = 147/325 (45%), Positives = 195/325 (60%), Gaps = 6/325 (1%)
Query: 60 NLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
N I G++VD+ASG+TF +P EV+ A D+D AV AR+AF E W K+
Sbjct: 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPE--WRKVPA 58
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
R+ + RAA+L++K EELA L T GKP + + +V + + Y AG ++ G
Sbjct: 59 PRRAEYLFRAAELLKKRKEELARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEGRRLFG 117
Query: 179 LTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
TVP + N T +PIGV I PWNFP+ + +WK+ PAL CGNT+V K AE TP
Sbjct: 118 ETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPAC 177
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
AL + +LF EAGLPPGV+NVV G G G AL H DVD +SFTG + G+ + E A+
Sbjct: 178 ALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARP 237
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
N K V LE+GGK+P I+ DDAD+D A+E A ++ F GQ C A SR VHE VYDEF++
Sbjct: 238 N-KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLK 296
Query: 358 KAKARAMRRIVGDPFKSGVEQGPQV 382
+ RA R VGD + GP +
Sbjct: 297 RFVERAKRLRVGDGLDEETDMGPLI 321
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 300 bits (771), Expect = 4e-98
Identities = 148/330 (44%), Positives = 194/330 (58%), Gaps = 13/330 (3%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE---GPWPKMTP 118
I G++ + GK PV +P T E I ++ AED+D AV ARKAF W + T
Sbjct: 12 IGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTG 71
Query: 119 YERSRIMLRA-ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
R++ LRA A I + ELA LET + GKP ++ ++ V YYA A+ +
Sbjct: 72 AVRAKY-LRAIAAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALD 129
Query: 178 G-----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
+++P + + L EP+GV G I PWN+PLL+ TWKVAPAL G T VLK +E
Sbjct: 130 AKQKAPVSLPME-TFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSE 188
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
+T L +A + E GLPPGVLNVV+G G AGA LASH VDK++FTG TG+ +
Sbjct: 189 LASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMT 248
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
AA+ +KPV+LELGGKSP I+FDD D+D+AVE A F F+ GQ C A SR VHER+
Sbjct: 249 AAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA 307
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
EF+EK A + DP + G GP V
Sbjct: 308 SEFLEKLVKWAKNIKISDPLEEGCRLGPVV 337
|
Length = 503 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 294 bits (755), Expect = 4e-96
Identities = 122/313 (38%), Positives = 158/313 (50%), Gaps = 11/313 (3%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V +P T EVI + A D+D A+A AR+AFD G W ER+R + + + +E
Sbjct: 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDW-STDAEERARCLRQLHEALEARK 59
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG-LTVPGDGNYHIQTL--- 192
EEL AL G P + + +V + L Y+A AD +P
Sbjct: 60 EELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVV 119
Query: 193 -HEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP 251
EP+GV I PWNFP L K+APAL GNT+VLK A TPL+AL + ++ E LP
Sbjct: 120 RREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLP 179
Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
GV+NVV+G G AL + VD +SFTG G+ + AA + LK V LELGGKS
Sbjct: 180 AGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKSA 238
Query: 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA--RAMRRIVG 369
I+ DDAD+ A A +N GQ C +R V YDE VE A A+ VG
Sbjct: 239 NIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALP--VG 296
Query: 370 DPFKSGVEQGPQV 382
DP G GP +
Sbjct: 297 DPADPGTVMGPLI 309
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 289 bits (743), Expect = 1e-94
Identities = 136/304 (44%), Positives = 162/304 (53%), Gaps = 8/304 (2%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V +P T EV A+ +D+AVA A+ AF W ER +L AD IE N
Sbjct: 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANA 58
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
EELA L T GKP ++ + EV V L Y A + D ++ +P+
Sbjct: 59 EELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLPDE--VIEDDDTRRVELRRKPL 115
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
GV IVPWNFPLLL WK+APAL GNT+VLK + TPL L + +L E LPPGVLN
Sbjct: 116 GVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLN 174
Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
VVSG G G AL SH D+ K+SFTG TGK V AAK LK VTLELGG I+
Sbjct: 175 VVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP 232
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376
D D+D + F N GQ C A R YVHE +YDEF E A A +VGD G
Sbjct: 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGT 292
Query: 377 EQGP 380
GP
Sbjct: 293 TLGP 296
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 290 bits (743), Expect = 5e-94
Identities = 149/324 (45%), Positives = 198/324 (61%), Gaps = 5/324 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
T+ LI G++ DA GKTFPVY+P T EVIANV + + A+A+A AF W K+T
Sbjct: 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLT 82
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ERS+I+ R DLI N E+LA L T GKP +++ EV L Y+A A +++
Sbjct: 83 ASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVY 141
Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G +P + + L +P+GV G I PWNFPL + T KV PAL G T+V+K +E TPL
Sbjct: 142 GDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPL 201
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
TAL A+L +AG+PPGVLNVV G P G AL + V K++FTG GK + AA
Sbjct: 202 TALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+ +K V+LELGG +PFI+FDDAD+D AV+ A + F N GQ C +R V E +YD+F
Sbjct: 262 T-VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFA 320
Query: 357 EKAKARAMRRIVGDPFKSGVEQGP 380
E + +VGD F+ GV QGP
Sbjct: 321 EAFSKAVQKLVVGDGFEEGVTQGP 344
|
Length = 498 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 286 bits (734), Expect = 3e-93
Identities = 129/307 (42%), Positives = 175/307 (57%), Gaps = 5/307 (1%)
Query: 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134
F +P V A VA G +D +RA+A A AF W TP ER RI+L+AA+++E+
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAF--PAWAATTPSERERILLKAAEIMER 58
Query: 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQ-TLH 193
++L L G Y ++ E LL AG ++ G T+P D + ++
Sbjct: 59 RADDLIDLLIDEGGSTYGKAW-FETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVR 117
Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG 253
P+GV I P+N+PL+L T KVA AL GNT+VLK +E+TP+ L +A++ EAGLP G
Sbjct: 118 RPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKG 177
Query: 254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313
V NVV+G G G L V ++FTG G+ + E A + +LK +TLELGGK+P I
Sbjct: 178 VFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236
Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
+ DAD+D AV A F F +QGQ C + SR V E VYDEFV+K ARA + VGDP
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296
Query: 374 SGVEQGP 380
GP
Sbjct: 297 PDTVIGP 303
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 282 bits (725), Expect = 7e-92
Identities = 127/314 (40%), Positives = 171/314 (54%), Gaps = 17/314 (5%)
Query: 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134
V P EVI V ED+++A+A A++ E + YER+ I+ RAA L+E+
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMK--SLPAYERAEILERAAQLLEE 58
Query: 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN-------- 186
EE A GKP + K EV + L A A ++ G T+P D +
Sbjct: 59 RREEFARTIALEAGKPIKDARK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIG 117
Query: 187 YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246
+ T+ EPIGV I P+NFPL L KV PA+ GN +VLK A QTPL+AL +A+L
Sbjct: 118 F---TIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLL 174
Query: 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL 306
EAGLP G LNVV+G G T G AL + V +SFTG G+ + K+ LK VTLEL
Sbjct: 175 EAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIAR---KAGLKKVTLEL 231
Query: 307 GGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366
G + I+ DAD+++AVE F N GQ C + R +VHE +YDEF+E+ A +
Sbjct: 232 GSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKL 291
Query: 367 IVGDPFKSGVEQGP 380
+VGDP + GP
Sbjct: 292 VVGDPLDEDTDVGP 305
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 280 bits (719), Expect = 3e-91
Identities = 125/290 (43%), Positives = 161/290 (55%), Gaps = 12/290 (4%)
Query: 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL---ETWNNGKPYV 152
D+DRA A A A W P ER+ I+ +AA+++E+ +E+A E+ G
Sbjct: 1 DVDRAYAAAAAAQKA--WAATPPQERAAILRKAAEILEERRDEIADWLIRES---GSTRP 55
Query: 153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQ-TLHEPIGVAGQIVPWNFPLLL 211
++ EV + +L AG + G +P D P+GV G I P+NFPL+L
Sbjct: 56 KAA-FEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLIL 114
Query: 212 FTWKVAPALTCGNTIVLKSAEQTPLT-ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA 270
VAPAL GN +VLK +TP+T L +A++F EAGLP GVLNVV G G G AL
Sbjct: 115 AMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALV 174
Query: 271 SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA 330
H V +SFTG G+ + ELA + +LK V LELGG +P I+ DDAD+D AV A F
Sbjct: 175 EHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFG 233
Query: 331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP 380
F +QGQ C A R VHE VYDEFVEK A+A VGDP GP
Sbjct: 234 AFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGP 283
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 3e-89
Identities = 138/335 (41%), Positives = 182/335 (54%), Gaps = 25/335 (7%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
+N ING FV SGKTF +P VIA V E A ++D AVA AR A +GPW KMT
Sbjct: 2 RNFINGAFV--ESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAAL-KGPWGKMTV 58
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ER+ ++ AD IE+ ++ A E + GKP + ++P R + +AD +
Sbjct: 59 AERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIP---RGAANFRVFADVVK- 114
Query: 179 LTVPG--------DG----NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
P DG NY + +P+GV G I PWN PLLL TWKV PAL CGNT+
Sbjct: 115 -NAPTECFEMATPDGKGALNY---AVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTV 170
Query: 227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCD 285
V+K +E+TP TA + ++ + G+P GV NVV G+GP +AG L H VD ++FTG
Sbjct: 171 VVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETR 230
Query: 286 TGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRT 345
TG + + AA +KPV+ ELGGK+ I+F D D D AV + F N GQ C R
Sbjct: 231 TGSAIMKAAADG-VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERV 289
Query: 346 YVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP 380
YV ++D FV KARA +G P GP
Sbjct: 290 YVERPIFDRFVAALKARAESLKIGVPDDPATNMGP 324
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 2e-86
Identities = 127/307 (41%), Positives = 176/307 (57%), Gaps = 6/307 (1%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V +P T +V+A V A D+DRAVA AR AF E W TP ER+R++ A + ++
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHA 58
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPI 196
EELA ++ + G P ++ +V + LL Y+AG ++ G T+P G TL EP
Sbjct: 59 EELALIDALDCGNPV-SAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPY 117
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
GV +IV +N PL+ K+A L GNT+V+K EQ PL+AL +A+L E LPPGV N
Sbjct: 118 GVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFN 176
Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
++ G G TAGAAL H DV +++ G TG+ + AA+ +K VTLELGGK+ I+F
Sbjct: 177 ILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTLELGGKNALIVFP 235
Query: 317 DADVDQAVELAHFAL-FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375
DAD + A + A + F GQ C + SR +VHE +YDE + + R VGDP
Sbjct: 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPA 295
Query: 376 VEQGPQV 382
GP V
Sbjct: 296 TTMGPLV 302
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 4e-86
Identities = 123/326 (37%), Positives = 172/326 (52%), Gaps = 11/326 (3%)
Query: 61 LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
+I G+ V + + +P +EV+ V + E+ + AV AR AF W + P
Sbjct: 36 VIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPPE 91
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
ER+R++LRAA L+ + ELAA GK + ++ ++V + L YYA ++ G
Sbjct: 92 ERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGF 150
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
V + ++ P+GV I PWNFPL + AL GNT+VLK AE TP+ A
Sbjct: 151 PVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAA 210
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK--- 296
+ ++ EAGLPPGV+N + G G G L H DV ++FTG + G + E AAK
Sbjct: 211 KLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQP 270
Query: 297 --SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
LK V E+GGK+ I+ +DAD+D+A E + F QGQ C A SR VHE VYDE
Sbjct: 271 GQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDE 330
Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGP 380
F+E+ R VGDP V GP
Sbjct: 331 FLERLVERTKALKVGDPEDPEVYMGP 356
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 267 bits (685), Expect = 2e-85
Identities = 124/327 (37%), Positives = 173/327 (52%), Gaps = 13/327 (3%)
Query: 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
+I G++V + G+TF +P E IA V ED++ AVA AR+AF E W K+
Sbjct: 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKE--WRKVPAP 57
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
R I+ + + + K E L L + GK + L EV ++ + Y G + ++GL
Sbjct: 58 RRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGL 116
Query: 180 TVPGDGNYH--IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
T+P + H ++ + P+GV G I +NFP+ + W A AL CGNT+V K +E TPLT
Sbjct: 117 TIPSERPGHRLMEQWN-PLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLT 175
Query: 238 ALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
A+ V K+ E GLPPGV+N+V+G G G L V +SFTG + G+ V E
Sbjct: 176 AIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGET 234
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
A+ V LELGG + I+ DDAD+D AV FA GQ C R VHE VYD
Sbjct: 235 VARRF-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYD 293
Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGP 380
EF+E+ + +GDP G GP
Sbjct: 294 EFLERLVKAYKQVRIGDPLDEGTLVGP 320
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 262 bits (671), Expect = 1e-83
Identities = 125/311 (40%), Positives = 172/311 (55%), Gaps = 9/311 (2%)
Query: 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134
V +P EVI V E++ A+ A KA D + Y+R +I+++ A+LIE+
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDV--MSNLPAYKRYKILMKVAELIER 58
Query: 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG-----NYHI 189
EELA L T GKP QS + EV +RL A A + G T+P D
Sbjct: 59 RKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIA 117
Query: 190 QTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG 249
T+ EPIGV G I P+NFP LF K+APA+ GN++V+K + TPLTA+ +AK+ EAG
Sbjct: 118 FTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAG 177
Query: 250 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK 309
LPPGV+NVV+GYG G + ++ V+ +SFTG G ++ A K V LELGG
Sbjct: 178 LPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIAS-KAGGTGKKVALELGGS 236
Query: 310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369
P I+ DAD+++AV +A F N GQ C A R V E VYD+F++ + + VG
Sbjct: 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVG 296
Query: 370 DPFKSGVEQGP 380
DP + GP
Sbjct: 297 DPLDESTDLGP 307
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 2e-82
Identities = 123/306 (40%), Positives = 184/306 (60%), Gaps = 6/306 (1%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
VY+P T E+I +V + ++ + A+ A +AF W T ERS ++ + +L+ +N
Sbjct: 1 VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKT--WRATTAKERSSLLRKWYNLMMENK 58
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEP 195
++LA L T NGKP ++ K E+ L ++A A +++G T+P + + + +P
Sbjct: 59 DDLARLITLENGKPLKEA-KGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQP 117
Query: 196 IGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL 255
+GV I PWNFP + T K AL G T+V+K AEQTPL+AL +A+L +AG+P GVL
Sbjct: 118 VGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVL 177
Query: 256 NVVSG-YGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314
NV++G G L + V K+SFTG + GKI+ + +A + +K V++ELGG +PFI+
Sbjct: 178 NVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSAST-VKKVSMELGGNAPFIV 236
Query: 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374
FDDAD+DQAVE A + F N GQ C +R YVH+ +YDEF +K + VG+
Sbjct: 237 FDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDE 296
Query: 375 GVEQGP 380
GV QGP
Sbjct: 297 GVTQGP 302
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 258 bits (660), Expect = 6e-82
Identities = 137/326 (42%), Positives = 180/326 (55%), Gaps = 12/326 (3%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
K LING+ V G+ PVY+P T EVI +AE AE +D AV A AF E W + TP
Sbjct: 3 KLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAE--WGQTTP 59
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
R+ +L+ AD+IE+N + A LE+ N GKP E+P +V + ++AG A + G
Sbjct: 60 KARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG 119
Query: 179 LTVPGDGNY---HIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
L G Y H + +P+GV I PWN+PL++ WK+APAL GN +VLK +E T
Sbjct: 120 LAA---GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEIT 176
Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
PLTAL +A+L + P GV+N++ G G T G L H V +S TG TG+ +
Sbjct: 177 PLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHT 235
Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
A S +K +ELGGK+P I+FDDAD+D VE FYN GQ C A R Y +YD
Sbjct: 236 APS-IKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDT 294
Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGP 380
VEK A G P E GP
Sbjct: 295 LVEKLGAAVATLKSGAPDDESTELGP 320
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 255 bits (654), Expect = 5e-81
Identities = 130/322 (40%), Positives = 171/322 (53%), Gaps = 12/322 (3%)
Query: 64 GQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSR 123
G++ D S +T V +P T E +A + ED+D A A A E W P ER+
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKE--WAATLPQERAE 58
Query: 124 IMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL---- 179
I+ +AA ++E+ +E+ +G +++ E + + A + ++ G
Sbjct: 59 ILEKAAQILEERRDEIVEWLIRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRILPS 117
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA- 238
VPG N EP+GV G I PWNFPL L VAPAL GN +VLK A TP+T
Sbjct: 118 DVPGKENR---VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGG 174
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
L +AK+F EAGLP GVLNVV G G G A H +SFTG G+ + ELA + +
Sbjct: 175 LLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-H 233
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
LK V LELGG +PF++ +DAD+D AV A F F +QGQ C A +R VHE VYDEFVEK
Sbjct: 234 LKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEK 293
Query: 359 AKARAMRRIVGDPFKSGVEQGP 380
R GDP GP
Sbjct: 294 FVERVKALPYGDPSDPDTVVGP 315
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 252 bits (646), Expect = 6e-80
Identities = 122/305 (40%), Positives = 164/305 (53%), Gaps = 6/305 (1%)
Query: 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137
DP T EVI A+G + + A+A AR+AFDE W P R+R++L AD E N E
Sbjct: 2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDW-AHDPRLRARVLLELADAFEANAE 60
Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-PGDGNYHIQTLHEPI 196
LA L NGK ++ + E+ + L YYAG A G + P G++ + L EP+
Sbjct: 61 RLARLLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEPEPGSFSL-VLREPM 118
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA-GLPPGVL 255
GVAG IVPWN P++L +APAL G T+V+K A QT + ++ E LP GV+
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVV 178
Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315
N+ + G A L + DVD +SFTG TG+ + AA LK + LELGGK+P I+F
Sbjct: 179 NLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF 237
Query: 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375
DDAD+D A+ AL GQ C AGSR V + DE ++ AR VG
Sbjct: 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPA 297
Query: 376 VEQGP 380
+ GP
Sbjct: 298 SDMGP 302
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 249 bits (637), Expect = 2e-78
Identities = 128/329 (38%), Positives = 177/329 (53%), Gaps = 15/329 (4%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
K LING++ ++ SGKT VY P EVI +V A +I A TA A G WP M
Sbjct: 3 KYLINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAG-RGWWPTMPL 60
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ER + + ADL+++N EE+A L W GK +LK EV + + ++ G
Sbjct: 61 EERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDG 119
Query: 179 LTVPGDGNYHIQTL-----HEPIGVAGQIVPWNFPL-LLFTWKVAPALTCGNTIVLKSAE 232
++PGD + EP+GV I P+N+PL L + K+ PAL GNT+V K A
Sbjct: 120 DSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS-KLIPALIMGNTVVFKPAT 178
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
Q L + +A+ FH+AG P GV+NVV+G G G L +H +D +SFTG + G +++
Sbjct: 179 QGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK 238
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAV-ELAHFALFYNQGQCCCAGSRTYVHERV 351
K + LELGGK P I+ DAD++ A E+ AL Y+ GQ C A R VHE V
Sbjct: 239 QHPM---KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHESV 294
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGP 380
DE VE K + VG P+ +GV+ P
Sbjct: 295 ADELVELLKEEVAKLKVGMPWDNGVDITP 323
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 248 bits (634), Expect = 6e-78
Identities = 127/321 (39%), Positives = 188/321 (58%), Gaps = 5/321 (1%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
LING+++DA +G+ V +P + + +V + A++ A+ A +A W +T E
Sbjct: 14 LINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 71
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R+ I+ R +L+ ++ ++LA L T GKP ++ K E+ + ++A +I+G T
Sbjct: 72 RANILRRWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDT 130
Query: 181 VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+PG + + + +PIGV I PWNFP + T K PAL G T+VLK A QTP +AL
Sbjct: 131 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 190
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+A+L AG+P GV NVV+G G L S+ V KLSFTG + G+ + E AK ++
Sbjct: 191 ALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK-DI 249
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
K V+LELGG +PFI+FDDAD+D+AVE A + F N GQ C +R YV + VYD F EK
Sbjct: 250 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 309
Query: 360 KARAMRRIVGDPFKSGVEQGP 380
+ + +GD + GV GP
Sbjct: 310 QQAVSKLHIGDGLEKGVTIGP 330
|
Length = 482 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 1e-76
Identities = 125/311 (40%), Positives = 168/311 (54%), Gaps = 11/311 (3%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V++P EVI V D D + A+ATAR + + P+ER I+ RAADL++K
Sbjct: 3 VHNPYDGEVIGKVPADDRADAEEALATARAGAEN--RRALPPHERMAILERAADLLKKRA 60
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQT 191
EE A + GKP + EV + L A A++I G +P D N T
Sbjct: 61 EEFAKIIACEGGKPIKDARV-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWT 119
Query: 192 LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP 251
+ EP+GV I P+NFPL L K+APA+ G +VLK A +TPL+AL +AK+ EAG+P
Sbjct: 120 IREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVP 179
Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
GVL VV+G G A A+ V LSFTG G + L A + K + LELGG +P
Sbjct: 180 EGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVG---EALRANAGGKRIALELGGNAP 236
Query: 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
I+ DAD+D A+E FY+ GQ C + R YVHE +YDEF+E A + VGDP
Sbjct: 237 VIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDP 296
Query: 372 FKSGVEQGPQV 382
+ GP +
Sbjct: 297 LDEDTDVGPLI 307
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 243 bits (623), Expect = 3e-76
Identities = 110/324 (33%), Positives = 164/324 (50%), Gaps = 6/324 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
K ING++V++ + + VY+P T EVIA V AE++D AVA A+ AF W
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPA--WSATP 58
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
+R ++M + L+E+N++ELA L T +GK + + +V + ++ + +
Sbjct: 59 VLKRQQVMFKFRQLLEENLDELARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHLLK 117
Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G + + +P+GV I P+NFP ++ W A+ CGNT VLK +E+ P
Sbjct: 118 GEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPG 177
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
A+ +A+L EAGLP GVLNVV G G A AL H D+ +SF G G+ + E AA
Sbjct: 178 AAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA 236
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+ K V G K+ ++ DAD++Q A F GQ C A S DE++
Sbjct: 237 NG-KRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWI 295
Query: 357 EKAKARAMRRIVGDPFKSGVEQGP 380
K RA + VG G + GP
Sbjct: 296 PKLVERAKKLKVGAGDDPGADMGP 319
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 244 bits (624), Expect = 7e-76
Identities = 129/322 (40%), Positives = 165/322 (51%), Gaps = 21/322 (6%)
Query: 67 VDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIML 126
VD A+G T V P T E +A V A D++ A A AR A + W ER+ ++L
Sbjct: 26 VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLL 83
Query: 127 RAADLIEKNMEELAALETWNNGKP--YVQSLKSEVPMVVRLLHYYAGWADKI-----HGL 179
R DL+ +N EEL L GK + +V + R YYA A K+
Sbjct: 84 RFHDLVLENREELLDLVQLETGKARRHAFEEVLDVALTAR---YYARRAPKLLAPRRRAG 140
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
+P L +P GV G I PWN+PL L PAL GN +VLK QTPLTAL
Sbjct: 141 ALPVLT--KTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTAL 198
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+L +EAGLP + VV+G GP G AL + D L FTG TG+++ E A L
Sbjct: 199 AAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG-RRL 255
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK- 358
+LELGGK+P I+ DDAD+D+A A A F N GQ C + R YVHE +YDEFV
Sbjct: 256 IGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAF 315
Query: 359 -AKARAMRRIVGDPFKSGVEQG 379
A RAMR +G + + G
Sbjct: 316 VAAVRAMR--LGAGYDYSADMG 335
|
Length = 524 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 241 bits (617), Expect = 8e-76
Identities = 117/281 (41%), Positives = 155/281 (55%), Gaps = 11/281 (3%)
Query: 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL 155
D D+AV A AF W K P ER I+L+AADL+E +E G
Sbjct: 1 DADQAVEAAAAAFPA--WSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGAT-AAWA 57
Query: 156 KSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213
V + +L A +I G ++P D G + + EP+GV I PWN P++L T
Sbjct: 58 GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAM-VVKEPVGVVLGIAPWNAPVILGT 116
Query: 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY---GPTAGAALA 270
+A L GNT+VLK++E +P T + ++FHEAGLP GVLNVV+ P AL
Sbjct: 117 RAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALI 176
Query: 271 SHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA 330
+H V K++FTG G+I+ E AAK +LKPV LELGGK+P I+ +DAD+D A A F
Sbjct: 177 AHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFG 235
Query: 331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
F N GQ C + R VHE + DEFVEK KA A ++ P
Sbjct: 236 AFLNSGQICMSTERIIVHESIADEFVEKLKAAA-EKLFAGP 275
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 238 bits (609), Expect = 7e-74
Identities = 109/321 (33%), Positives = 160/321 (49%), Gaps = 18/321 (5%)
Query: 61 LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
+I G+ + +P +EV+ V++ E ++A+ A +AF+ W K +P
Sbjct: 40 IIGGERITTE--DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFET--WKKWSPE 95
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA----GWADK 175
+R+RI+LRAA +I + E +A GKP+ ++ ++ + L YYA AD
Sbjct: 96 DRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEA-DADTAEAIDFLEYYARQMLKLADG 154
Query: 176 IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
+ PG+ N + + P+GV I PWNFP + A+ GNT++LK A TP
Sbjct: 155 KPVESRPGEHN---RYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTP 211
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
+ A ++ EAGLP GV+N V G G G L H ++FTG + G + E AA
Sbjct: 212 VIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAA 271
Query: 296 KSN-----LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER 350
K LK V E+GGK ++ +DAD+D A E + F GQ C A SR VHE
Sbjct: 272 KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHED 331
Query: 351 VYDEFVEKAKARAMRRIVGDP 371
VYDE +EK VG+P
Sbjct: 332 VYDEVLEKVVELTKELTVGNP 352
|
Length = 514 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 3e-73
Identities = 123/301 (40%), Positives = 162/301 (53%), Gaps = 12/301 (3%)
Query: 84 EVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE 143
V+ V DA D+DRA A A A W P ER+ ++ RAADL+E++ +E+A
Sbjct: 2 AVLGEVGVADAADVDRAAARAAAAQRA--WAATPPRERAAVLRRAADLLEEHADEIA--- 56
Query: 144 TWNNGKPYVQSLKS--EVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAG 200
W + K+ EV + LH AG + G +P G + P+GV G
Sbjct: 57 DWIVRESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLAR-RVPLGVVG 115
Query: 201 QIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV-AKLFHEAGLPPGVLNVVS 259
I P+NFPL+L VAPAL GN +VLK +TP++ V A+LF EAGLP GVL+V+
Sbjct: 116 VISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLP 175
Query: 260 GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD 319
G G AG AL +V +SFTG G+ V E A + +LK V+LELGGK+ I+ DDAD
Sbjct: 176 G-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDAD 233
Query: 320 VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQG 379
+D A + F +QGQ C A R VHE V D + K A+A VGDP V G
Sbjct: 234 LDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALG 293
Query: 380 P 380
P
Sbjct: 294 P 294
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 5e-73
Identities = 121/312 (38%), Positives = 162/312 (51%), Gaps = 20/312 (6%)
Query: 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137
+P T EV+ V D ++ AVA AR A W + R++ +LR + + +
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRA--WAALGVEGRAQRLLRWKRALADHAD 58
Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI-------HGLTVPGDGNYHIQ 190
ELA L GKP + EV + + + + A A ++ GL +P N
Sbjct: 59 ELAELLHAETGKPRADAG-LEVLLALEAIDWAARNAPRVLAPRKVPTGLLMP---NKKAT 114
Query: 191 TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL 250
+ P GV G I PWN+PLL + PAL GN +VLK +E TPL +A+ + AG
Sbjct: 115 VEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGP 174
Query: 251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310
P GVL VV+G G T GAAL VDK++FTG TG+ V AA+ L PV LELGGK
Sbjct: 175 PQGVLQVVTGDGAT-GAALIDAG-VDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKD 231
Query: 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK--AKARAMRRIV 368
P I+ DAD+++A A + N GQ C + R YVHE VYDEFV + AKARA+R
Sbjct: 232 PMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALR--P 289
Query: 369 GDPFKSGVEQGP 380
G + GP
Sbjct: 290 GADDIGDADIGP 301
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 229 bits (587), Expect = 2e-71
Identities = 112/302 (37%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156
I+ A+ A AF W K + ER+ ++ + ADL+ + +ELA L T GKP ++ +
Sbjct: 1 IEAALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-R 57
Query: 157 SEVPMVVRLLHYYAGWADKIHGL----TVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLL 211
+EV + YYA + + D G +++ +EP+GV I+PWNFP
Sbjct: 58 AEVEKCAWICRYYA---ENAEAFLADEPIETDAGKAYVR--YEPLGVVLGIMPWNFPF-- 110
Query: 212 FTWKV----APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL-NVVSGYGPTAG 266
W+V AP L GNT++LK A P AL + +LF EAG P GV N++
Sbjct: 111 --WQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVE- 167
Query: 267 AALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326
A+ + V ++ TG G+ V A K NLK LELGG PFI+ DDAD+D+AV+
Sbjct: 168 -AIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKT 225
Query: 327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFSA 386
A N GQ C A R VHE VYDEF+EK VGDP + GP L
Sbjct: 226 AVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGP--LARK 283
Query: 387 DL 388
DL
Sbjct: 284 DL 285
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 226 bits (579), Expect = 4e-70
Identities = 119/310 (38%), Positives = 162/310 (52%), Gaps = 16/310 (5%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136
V +P T EV+ V G E + A+A A +T Y+RS I+ +AA L+E
Sbjct: 3 VRNPYTGEVVGTVPAGTEEALREALALAA-----SYRSTLTRYQRSAILNKAAALLEARR 57
Query: 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYH------IQ 190
EE A L T +G + EV +L + A A + G + D I
Sbjct: 58 EEFARLITLESGLCLKDTRY-EVGRAADVLRFAAAEALRDDGESFSCD-LTANGKARKIF 115
Query: 191 TLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL 250
TL EP+GV I P+N PL K+APA+ N IVLK +E+TPL+A+Y+A L +EAGL
Sbjct: 116 TLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGL 175
Query: 251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310
PP +L+VV+G G L +H DVD ++FTG GK + AA + K LELGG
Sbjct: 176 PPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGND 232
Query: 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370
P I+ DDAD+++A LA + N GQ C A R VHE V DEFV+ ++ +VGD
Sbjct: 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGD 292
Query: 371 PFKSGVEQGP 380
P + G
Sbjct: 293 PMDPATDMGT 302
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 1e-69
Identities = 112/309 (36%), Positives = 151/309 (48%), Gaps = 17/309 (5%)
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
P T E + + + D++ A A AR A W ER+ + LR DL+ + +E
Sbjct: 2 APFTGEPLGELPQSTPADVEAAFARARAAQRA--WAARPFAERAAVFLRFHDLVLERRDE 59
Query: 139 LAALETWNNGKPYVQSLKS--EVPMVVRLLHYYAGWADKI-----HGLTVPGDGNYHIQT 191
L L GK + + +V +V R YYA A+++ +P
Sbjct: 60 LLDLIQLETGKARRHAFEEVLDVAIVAR---YYARRAERLLKPRRRRGAIPVLT--RTTV 114
Query: 192 LHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP 251
P GV G I PWN+PL L PAL GN +VLK QT LTAL+ +L EAGLP
Sbjct: 115 NRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLP 174
Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311
+ VV+G G G A+ + D + FTG TG++V E A L +LELGGK+P
Sbjct: 175 RDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLIGCSLELGGKNP 231
Query: 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
I+ +DAD+D+A A A F N GQ C + R YVHE VYDEFV + AR +G
Sbjct: 232 MIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAA 291
Query: 372 FKSGVEQGP 380
G + G
Sbjct: 292 LDYGPDMGS 300
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 223 bits (571), Expect = 7e-69
Identities = 113/307 (36%), Positives = 148/307 (48%), Gaps = 8/307 (2%)
Query: 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137
P VIA E + A+ AR A W + ER I+ RA +L+ N +
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTD 58
Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHGLTVPGDGNYHIQTLHEPI 196
E+A TW G+P Q+ E+ ++ Y A++ + + VP + EP+
Sbjct: 59 EIAEELTWQMGRPIAQA-GGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPL 117
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
GV I PWN+P L V PAL GN ++LK + QTPL A F EAGLP GV
Sbjct: 118 GVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQ 177
Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
V+ T AAL + +D +SFTG G+ +Q AA V LELGGK P +
Sbjct: 178 VLHLSHET-SAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP 235
Query: 317 DADVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375
DAD+D A E L A F+N GQ CC+ R YVHE +YD FVE A +GDP
Sbjct: 236 DADLDAAAESLVDGA-FFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPS 294
Query: 376 VEQGPQV 382
GP V
Sbjct: 295 TTLGPVV 301
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 2e-65
Identities = 100/256 (39%), Positives = 136/256 (53%), Gaps = 8/256 (3%)
Query: 129 ADLIEKNMEELAALETWNNGKPYVQSLKS-EVPMVVRLLHYYAGWADKIHGLTVPGD-GN 186
A I + E++AL GK +Q L EV + Y A WA + G + D
Sbjct: 5 AAGIRERASEISALIVEEGGK--IQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPG 62
Query: 187 YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246
+I +GV I+PWNFP L K+APAL GNTIV+K +E TP A+ AK+
Sbjct: 63 ENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVD 122
Query: 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL 306
E GLP GV N+V G G T G LA + V +S TG G+ + AAK N+ V LEL
Sbjct: 123 EIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVCLEL 181
Query: 307 GGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366
GGK+P I+ DDAD+D AV+ + N GQ C R YV + +YD+FV + AM+
Sbjct: 182 GGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE-AMQA 240
Query: 367 I-VGDPFK-SGVEQGP 380
+ G+P + + + GP
Sbjct: 241 VQFGNPAERNDIAMGP 256
|
Length = 409 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 208 bits (532), Expect = 4e-63
Identities = 111/312 (35%), Positives = 149/312 (47%), Gaps = 14/312 (4%)
Query: 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134
V +P T EV+A VA +DI+ A+A A KAF P + + R+ I+L +E+
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEE 58
Query: 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN-----YHI 189
EELA GKP + + EV + A A +I+G +P D +
Sbjct: 59 RFEELAETIVLEAGKPIKDA-RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQG 117
Query: 190 QTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG 249
PIG I P+NFPL L KVAPA+ G VLK A +TPL+AL + ++ E G
Sbjct: 118 LVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETG 177
Query: 250 LPPGVLNVVSGYGPTAGAA-LASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGG 308
LP G +V+ A L + + LSFTG G ++ A K K V LELGG
Sbjct: 178 LPKGAFSVLP--CSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGG 232
Query: 309 KSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368
+ I+ DAD+D A + F FY GQ C + R VH VYDEF + AR
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKT 292
Query: 369 GDPFKSGVEQGP 380
GDP + GP
Sbjct: 293 GDPKDDATDVGP 304
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 5e-62
Identities = 111/331 (33%), Positives = 164/331 (49%), Gaps = 16/331 (4%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
+ING+ V+ K + +EV+ V++ E + A+ A KAF+ W K P E
Sbjct: 36 VINGERVETE-NKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEA--WKKTDPEE 92
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG-- 178
R+ I+ +AA ++ + E +AL GKP+ ++ +EV + + YYA ++
Sbjct: 93 RAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEA-DAEVAEAIDFMEYYARQMIELAKGK 151
Query: 179 --LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
+ G+ N Q ++ P GV I PWNFP + + GN +VLK AE P+
Sbjct: 152 PVNSREGETN---QYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPV 208
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
A ++ EAGLP GV+ V G G G L H ++FTG + G + E AAK
Sbjct: 209 IAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAK 268
Query: 297 -----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
+LK V E+GGK I+ +DAD++ A + A + F GQ C AGSR VHE+V
Sbjct: 269 VQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKV 328
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
YDE VE+ VG P + V GP +
Sbjct: 329 YDEVVERFVEITESLKVGPPDSADVYVGPVI 359
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 204 bits (521), Expect = 3e-61
Identities = 126/327 (38%), Positives = 168/327 (51%), Gaps = 11/327 (3%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
LI+G+ V ++G TFP +P T EV+ A+ A D+D A+A AR+AFDE W + T
Sbjct: 4 LIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTAL- 61
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH--- 177
R R + + D + ++EEL L G P + + +++ V L + A A+
Sbjct: 62 RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAWTT 121
Query: 178 --GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
G+ P E +GV G I PWNFP + K+ PAL GNT+VLK A TP
Sbjct: 122 DLGVASPMGIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTP 181
Query: 236 LTALYVAKLFHE-AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
A + +L E PPGV+N+V+ GA LA VD +SFTG TG+ V A
Sbjct: 182 WCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADA 241
Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
A + LK V LELGGKS FI+ DDAD+ A +A F + + GQ C +R V YDE
Sbjct: 242 AAT-LKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDE 300
Query: 355 FVEKAKARAMRRI-VGDPFKSGVEQGP 380
V A A M I GDP G GP
Sbjct: 301 AVAAA-AATMGSIKPGDPADPGTVCGP 326
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 4e-59
Identities = 107/318 (33%), Positives = 154/318 (48%), Gaps = 14/318 (4%)
Query: 70 ASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAA 129
G P E IA V + ED + + A++AF E W + +R I+ +
Sbjct: 9 GGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKE--WRDVPAPKRGEIVRQIG 66
Query: 130 DLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYH- 188
D + K E L L + GK + L EV ++ + + G + +++GLT+P + H
Sbjct: 67 DALRKKKEALGKLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTIPSERPGHR 125
Query: 189 -IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE 247
++ + P+GV G I +NFP+ ++ W A AL CGN +V K + TPLTA+ V K+
Sbjct: 126 MMEQWN-PLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVAR 184
Query: 248 A----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVT 303
GLP + ++V G G G AL V +SFTG G+ V + A
Sbjct: 185 VLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAA-RFGRSL 242
Query: 304 LELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK-AKAR 362
LELGG + I+ +DAD+D AV FA GQ C R VHE +YDE +E+ KA
Sbjct: 243 LELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAY 302
Query: 363 AMRRIVGDPFKSGVEQGP 380
RI GDP G GP
Sbjct: 303 KQVRI-GDPLDDGTLVGP 319
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 1e-57
Identities = 119/325 (36%), Positives = 165/325 (50%), Gaps = 11/325 (3%)
Query: 61 LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
+ING+ + +G+ PV DP I V+ DAED+D A+A A AF W
Sbjct: 36 IINGE--ETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG--WSATPVE 91
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
ER+ I+ +AADL+E N EL AL GK + +EV + YYA A ++
Sbjct: 92 ERAEILEKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSD 150
Query: 180 TVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA 238
+ L GV I PWNFPL +FT ++A AL GNT++ K AEQTPL A
Sbjct: 151 PELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA 210
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK-IVQELAAKS 297
+L HEAG+P VL +V G G G AL +H +D + FTG +T K I + LA +
Sbjct: 211 ARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERD 270
Query: 298 N-LKPVTLELGGKSPFIIFDDADVDQAV-ELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
+ P+ E GGK+ I+ A +QAV ++ A F + GQ C A Y+ E + + F
Sbjct: 271 GPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYLQEEIAERF 329
Query: 356 VEKAKARAMRRIVGDPFKSGVEQGP 380
+E K VGDP+ + GP
Sbjct: 330 IEMLKGAMASLKVGDPWDLSTDVGP 354
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 3e-57
Identities = 115/324 (35%), Positives = 163/324 (50%), Gaps = 17/324 (5%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I G+ V + V P V+ V + +D+ RA A A A+ P +T YER
Sbjct: 8 IAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAA-AYR----PTLTRYER 60
Query: 122 SRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV 181
S I+ RAA L+ EE++ L T +G SL EV V +L + A A + G
Sbjct: 61 SAILDRAAALLAARKEEISDLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQIF 119
Query: 182 PGDGNYH-----IQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
D H + T EP+ GV I P+N P+ K+APA+ N +V+K +E+TP
Sbjct: 120 SCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTP 179
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
L+ALY+A + +EAGLPP +L VV+G L ++ VD ++FTG GK + AA
Sbjct: 180 LSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI---AA 236
Query: 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
++ + LELGG P I+ +DAD+D+A +LA + N GQ C A R V E V D F
Sbjct: 237 RAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRF 296
Query: 356 VEKAKARAMRRIVGDPFKSGVEQG 379
E + GDP V+ G
Sbjct: 297 TELLVEKTRAWRYGDPMDPSVDMG 320
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 8e-53
Identities = 106/333 (31%), Positives = 170/333 (51%), Gaps = 18/333 (5%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
L+ G + V +EV+ A+ D + + A+ A AF W K P E
Sbjct: 21 LVIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKT--W-KDWPQE 77
Query: 121 -RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG- 178
R+R++L+AADL+ + EL A T+ GK +V+++ +V + + YYA A ++
Sbjct: 78 DRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYP 136
Query: 179 ----LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
+ PG+ N ++ + +G I PWNFP+ +FT + + GNT++ K AE
Sbjct: 137 AVEVVPYPGEDN---ESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDA 193
Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
+ V ++FHEAG PPGV+ + G G GA L H + ++FTG +TGK + E A
Sbjct: 194 VVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAA 253
Query: 295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
A+ + K + +E GGK+ I+ + AD + VE + F QGQ C A SR + +
Sbjct: 254 ARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQ 313
Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
Y+ +E+ RA R VG P ++G + GP +
Sbjct: 314 GAYEPVLERLLKRAERLSVGPPEENGTDLGPVI 346
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 7e-52
Identities = 113/324 (34%), Positives = 162/324 (50%), Gaps = 21/324 (6%)
Query: 61 LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
++NG V G+ PV +P +++ V E D+++A+ A A W P
Sbjct: 117 IVNGAPVAG--GEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPI--WSATPPA 172
Query: 120 ERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL 179
ER+ I+ RAADL+E M +L L GK ++ +EV V L YYAG A
Sbjct: 173 ERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAI-AEVREAVDFLRYYAGQARD---- 227
Query: 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239
T H P+G I PWNFPL +FT ++A AL GN+++ K AEQTPL A
Sbjct: 228 TFGNLT-------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAA 280
Query: 240 YVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+L HEAG+PPGVL ++ G G T GAAL + V + FTG + +++Q AK
Sbjct: 281 QAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQG 340
Query: 300 KPVTL--ELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
+P+ L E GG++ I+ A +Q V + F + GQ C A + E V D +
Sbjct: 341 RPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILT 400
Query: 358 KAKARAMRRI-VGDPFKSGVEQGP 380
K AM + VG+P + + GP
Sbjct: 401 MLKG-AMAELRVGNPDRLTTDVGP 423
|
Length = 769 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 1e-51
Identities = 111/312 (35%), Positives = 150/312 (48%), Gaps = 22/312 (7%)
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
+P T E + +++D A+A A F + + T +R+R AADL+E ++
Sbjct: 7 NPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEADQ 64
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----GNYHIQTLHE 194
+AAL T GK + K+E + YYA A+ + P D G ++
Sbjct: 65 VAALMTLEMGKTLASA-KAEALKCAKGFRYYAEHAEALLA-DEPADAAAVGASRAYVRYQ 122
Query: 195 PIGVAGQIVPWNFPLLLFTWKV----APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL 250
P+GV ++PWNFPL W+V APAL GN +LK A P TALY+A LF AG
Sbjct: 123 PLGVVLAVMPWNFPL----WQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGF 178
Query: 251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310
P G + G A A+ V + TG G+ V +A +K LELGG
Sbjct: 179 PDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDE-IKKTVLELGGSD 236
Query: 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK--AKARAMRRIV 368
PFI+ AD+D+A E A A N GQ C A R VH VYD F EK A+ A+R V
Sbjct: 237 PFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALR--V 294
Query: 369 GDPFKSGVEQGP 380
GDP + GP
Sbjct: 295 GDPTDPDTDVGP 306
|
Length = 457 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 176 bits (449), Expect = 8e-51
Identities = 102/320 (31%), Positives = 147/320 (45%), Gaps = 32/320 (10%)
Query: 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137
YDP T + + +V ED+D A+A AR A E W K + ER +++ I +N E
Sbjct: 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQE 58
Query: 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL-----------TVPGDGN 186
E+ + + GK V + E+ +V +KI + PG
Sbjct: 59 EICRVACRDTGKTMVDASLGEI-LVT---------CEKIRWTLKHGEKALRPESRPGGLL 108
Query: 187 --YHIQTLH-EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK 243
Y + EP+GV G IV WN+P + AL GN IV+K +EQ ++ +
Sbjct: 109 MFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLS 168
Query: 244 LFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299
+ E G P ++ +V+ T AL SH +D ++F G GK V AA+S L
Sbjct: 169 IIRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVMAAAAES-L 226
Query: 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359
PV LELGGK P I+ DDAD+DQ + F + GQ C R VHE++YD+ +E
Sbjct: 227 TPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEIL 286
Query: 360 KARAMRRIVGDPFKSGVEQG 379
R G P V+ G
Sbjct: 287 TDRVQALRQGPPLDGDVDVG 306
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 2e-50
Identities = 105/294 (35%), Positives = 148/294 (50%), Gaps = 17/294 (5%)
Query: 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY---- 151
+D AVA AR AF W ++ ER+ I+ R A+L++ N EELA L + GKP
Sbjct: 1 QVDAAVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ 58
Query: 152 --VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 209
V ++ ++ + ++ H G T G ++ H P GV P+NFP
Sbjct: 59 TEVAAMAGKIDISIKAYHERTGERA-----TPMAQGRAVLR--HRPHGVMAVFGPFNFPG 111
Query: 210 LLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAAL 269
L + PAL GNT+V K +E TP A + +L+ EAGLPPGVLN+V G G G AL
Sbjct: 112 HLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEAL 170
Query: 270 ASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHF 329
A+H +D L FTG TG ++ A K + LE+GG +P +++D AD+D A L
Sbjct: 171 AAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQ 230
Query: 330 ALFYNQGQCCCAGSRTYVHE-RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+ F GQ C R V + V D F+E+ A R +G P GP +
Sbjct: 231 SAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLI 284
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 5e-50
Identities = 116/322 (36%), Positives = 168/322 (52%), Gaps = 26/322 (8%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
ING ++ A G+ F +P + EV+ + A +D AV AR AF W +++ ER
Sbjct: 5 INGDWI-AGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFEER 61
Query: 122 SRIMLRAADLIEKNMEELA---ALETWNNGKPY------VQSLKSEVPMVVRLLHYYAGW 172
I+ R A L+E+N EELA A ET GKP V ++ +++ + ++ H G
Sbjct: 62 QAIVERFAALLEENKEELAEVIARET---GKPLWEAATEVTAMINKIAISIQAYHERTG- 117
Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
+K + DG ++ H P GV P+NFP L + PAL GNT+V K +E
Sbjct: 118 -EKRSEM---ADGAAVLR--HRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSE 171
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV-Q 291
TP A KL+ +AGLP GVLN+V G G G ALA+H D+D L FTG +TG ++ +
Sbjct: 172 LTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHR 230
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
+ A + K + LE+GG +P +I + AD+D AV L + F + GQ C R V +
Sbjct: 231 QFAGQPE-KILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGA 289
Query: 352 Y-DEFVEKAKARAMRRIVGDPF 372
D F+ + A A R VG
Sbjct: 290 QGDAFLARLVAVAKRLTVGRWD 311
|
Length = 487 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 7e-50
Identities = 105/323 (32%), Positives = 163/323 (50%), Gaps = 7/323 (2%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
+ I G+F + ASG PV +P T EV VA +++D AVA+AR+ F W + +
Sbjct: 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETF--LTWGQTSL 59
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
+R+ ++LR L++++ +E+A L T +GK + + +V + ++ + G + G
Sbjct: 60 AQRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKG 118
Query: 179 LTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
T + ++ +P+GV I P+NFP ++ W A+ CGNT VLK +E+ P
Sbjct: 119 ETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSA 178
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
A+ +A+LF EAG P GVLNVV G A L H DV +SF G G+ + +
Sbjct: 179 AVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAH 237
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357
K V G K+ ++ DAD D A + A + GQ C A S V DE+V
Sbjct: 238 G-KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS-AAVLVGAADEWVP 295
Query: 358 KAKARAMRRIVGDPFKSGVEQGP 380
+ + RA + +G G E GP
Sbjct: 296 EIRERAEKIRIGPGDDPGAEMGP 318
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 175 bits (445), Expect = 5e-48
Identities = 122/319 (38%), Positives = 165/319 (51%), Gaps = 26/319 (8%)
Query: 67 VDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIM 125
+ G+ PV P V+ VA DAE +++A+A AR AF W + ER+ I+
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA--WSRTPVEERAAIL 613
Query: 126 LRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG--LTVPG 183
RAADL+E N EL AL GK ++ +EV V YYA A ++ G +PG
Sbjct: 614 ERAADLLEANRAELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQARRLFGAPEKLPG 672
Query: 184 -DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVA 242
G + LH GV I PWNFPL +F +VA AL GNT++ K AEQTPL A
Sbjct: 673 PTGESNELRLH-GRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAV 731
Query: 243 KLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV-QELAAKSNLKP 301
KL HEAG+P VL ++ G G T GAAL + + ++FTG +T +I+ + LAA+
Sbjct: 732 KLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG-PI 790
Query: 302 VTL--ELGGKSPFIIFDDAD------VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
V L E GG++ I+ D+ VD V A F + GQ C A +V E + D
Sbjct: 791 VPLIAETGGQNAMIV--DSTALPEQVVDDVVTSA----FRSAGQRCSALRVLFVQEDIAD 844
Query: 354 EFVEKAKARAMRRI-VGDP 371
+E K AM + VGDP
Sbjct: 845 RVIEMLKG-AMAELKVGDP 862
|
Length = 1038 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 173 bits (441), Expect = 1e-47
Identities = 127/374 (33%), Positives = 183/374 (48%), Gaps = 35/374 (9%)
Query: 18 ASPSLLRSLGRESSRARGISRFSTAAVVEEPIIPPVQISYT-KNLINGQFVDAASGKTFP 76
P L R +S+ +S +T A ++E + ++ L+ G G T P
Sbjct: 514 PLPRDLYGPERRNSKGLDLSDEATLAALDEALNAFAAKTWHAAPLLAG---GDVDGGTRP 570
Query: 77 VYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135
V +P +V+ V E AED++RA+A A+ AF E W ER+ I+ RAADL+E +
Sbjct: 571 VLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILERAADLMEAH 628
Query: 136 MEELAAL------ETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHI 189
M EL AL +T N +EV V L YYA A + + G G
Sbjct: 629 MPELFALAVREAGKTLANAI-------AEVREAVDFLRYYAAQARR----LLNGPG---- 673
Query: 190 QTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG 249
H+P+G I PWNFPL +FT ++A AL GNT++ K AEQTPL A +L HEAG
Sbjct: 674 ---HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAG 730
Query: 250 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTL--ELG 307
+P L ++ G G T GAAL + + + FTG + +++Q AK + PV L E G
Sbjct: 731 VPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETG 790
Query: 308 GKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-R 366
G++ I+ A +Q V + F + GQ C A + E V D + K AM
Sbjct: 791 GQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKG-AMDEL 849
Query: 367 IVGDPFKSGVEQGP 380
+GDP++ + GP
Sbjct: 850 RIGDPWRLSTDVGP 863
|
Length = 1208 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 8e-47
Identities = 97/325 (29%), Positives = 146/325 (44%), Gaps = 23/325 (7%)
Query: 61 LINGQFVDAASGKTFPV---YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+I + + PV D R +++ V + + A+ +A++AF W
Sbjct: 41 IIGHSYKADGEAQ--PVTNPADRR--DIVGQVFHANLAHVQAAIDSAQQAFPT--WNATP 94
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ER+ + R ADL+E +M EL AL GK ++ +EV V YYA +
Sbjct: 95 AKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAI-AEVREAVDFCRYYAKQVRDVL 153
Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
G + E GV I PWNFPL +FT +++ AL GNT++ K AEQT L
Sbjct: 154 G-----------EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLI 202
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
A +L EAG P G + ++ G G GAAL S + ++FTG + +++ + A+
Sbjct: 203 AYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQR 262
Query: 298 NLKPVTL--ELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEF 355
PV L E GG++ I+ A +Q V + F + GQ C A V E V D
Sbjct: 263 EDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRV 322
Query: 356 VEKAKARAMRRIVGDPFKSGVEQGP 380
+ + VG P + GP
Sbjct: 323 LTMIQGAMQELKVGVPHLLTTDVGP 347
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 4e-45
Identities = 120/343 (34%), Positives = 167/343 (48%), Gaps = 32/343 (9%)
Query: 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYER 121
I+G++ A G++F +P T EV+ A A ++ AVA AR AF W +++ ER
Sbjct: 3 IDGKWR-AGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPA--WARLSLEER 59
Query: 122 SRIMLRAADLIEKNMEELA---ALETWNNGKPY------VQSLKSEVPMVVRLLHYYAGW 172
++ R A L+E+ E LA A ET GKP V S+ +V + ++ H G
Sbjct: 60 IAVVQRFAALLEERKEALARVIARET---GKPLWETRTEVASMIGKVAISIKAYHERTG- 115
Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
DG ++ H P GV P+NFP L + PAL GNT+V K +E
Sbjct: 116 ----ESENPMPDGRAVLR--HRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSE 169
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
TP A KL+ +AGLP GVLN+V G G ALA+H D+D L FTG +TG ++
Sbjct: 170 LTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHR 228
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
A K + LE+GG +P I+ + AD+D AV L + F + GQ C R V +
Sbjct: 229 QFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQ 288
Query: 353 -DEFVEKAKARAMRRIVGD------PFKSGV--EQGPQVLFSA 386
D F+ + A R VG PF V Q Q L +A
Sbjct: 289 GDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAA 331
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 2e-42
Identities = 103/324 (31%), Positives = 163/324 (50%), Gaps = 21/324 (6%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
K +G++ ++SGK+ + +P T + V E++++A+ +A+ A + W K
Sbjct: 17 KYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAA--QKAWAKTPL 74
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVR---LLHYYA----- 170
++R+ ++ +AA +++++ +A KP K V VVR L+ Y A
Sbjct: 75 WKRAELLHKAAAILKEHKAPIAECLVKEIAKP----AKDAVTEVVRSGDLISYTAEEGVR 130
Query: 171 --GWADKIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
G + + PG+ N + T P+GV I P+N+P+ L K+APAL GN +V
Sbjct: 131 ILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVV 190
Query: 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287
LK Q + AL++ FH AG P G+++ V+G G G L H V+ +SFTG DTG
Sbjct: 191 LKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG 249
Query: 288 KIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYV 347
+ + K+ + P+ +ELGGK I+ +DAD+D A F GQ C A V
Sbjct: 250 IAI---SKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLV 306
Query: 348 HERVYDEFVEKAKARAMRRIVGDP 371
E V D VEK A+ + VG P
Sbjct: 307 MESVADALVEKVNAKVAKLTVGPP 330
|
Length = 496 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 1e-41
Identities = 95/274 (34%), Positives = 135/274 (49%), Gaps = 17/274 (6%)
Query: 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEELAALETWNNGKPYVQ 153
++ID + R F G K E L+ ++ N E + + G+P +
Sbjct: 5 DEIDSIHSRLRATFRSG---KTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFE 61
Query: 154 SLKSEV-PMVVRLLHYYAG---WA--DKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWN 206
+L +EV + +LH WA +K+ + G I+ EP+GV I PWN
Sbjct: 62 TLLTEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIR--KEPLGVVLIIGPWN 119
Query: 207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAG 266
+P+LL + A+ G T+VLK +E TP TA +A+L + L P VV G P
Sbjct: 120 YPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY-LDPDAFQVVQGGVPETT 178
Query: 267 AALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326
A L D K+ +TG G+I+ E AAK +L PVTLELGGKSP I+ +AD++ A +
Sbjct: 179 ALLEQKFD--KIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR 235
Query: 327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360
+ F N GQ C A V VYDEFVE+ K
Sbjct: 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELK 269
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 1e-40
Identities = 98/282 (34%), Positives = 138/282 (48%), Gaps = 16/282 (5%)
Query: 100 AVATARKAFDEGPWPKMTPYE-RSRIMLRAADLIEKNMEEL-AALETWNNGKPYVQSLKS 157
VA R+ F G K E R + ++ +N EE+ AAL + GKP ++ +
Sbjct: 3 LVARLRETFLTG---KTRSLEWRKAQLKALKRMLTENEEEIAAALYA-DLGKPPAEAYLT 58
Query: 158 EVPMVVRLLHYY----AGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213
E+ +V+ + + W + EP+GV I PWN+PL L
Sbjct: 59 EIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLAL 118
Query: 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHM 273
+ A+ GNT+VLK +E P T+ +AKL + P + VV G A A LA
Sbjct: 119 APLIGAIAAGNTVVLKPSELAPATSALLAKLIPKY-FDPEAVAVVEGGVEVATALLAEPF 177
Query: 274 DVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFY 333
D + FTG GKIV E AAK +L PVTLELGGKSP I+ DA+++ A + F
Sbjct: 178 D--HIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFL 234
Query: 334 NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG-DPFKS 374
N GQ C A VHE + DE +E+ K +A++ G DP +S
Sbjct: 235 NAGQTCIAPDYVLVHESIKDELIEELK-KAIKEFYGEDPKES 275
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 5e-40
Identities = 107/315 (33%), Positives = 145/315 (46%), Gaps = 22/315 (6%)
Query: 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAF-DEGPWPKMTPYERSRIMLRAADLIEKN 135
V +P + I V D ID+A+ TA F D W + +ER I+ R ADL+E+
Sbjct: 3 VVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLMEER 60
Query: 136 MEELAALETWNNGKPYVQSLKSE-------VPMVVRLLHYYAGWADKIHGLTVPGDGNYH 188
+ELA L GKP V + K E V + L G + GLT G
Sbjct: 61 ADELALLIAREGGKPLVDA-KVEVTRAIDGVELAADELGQLGG-REIPMGLTPASAGRIA 118
Query: 189 IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA 248
T EPIGV I +N PL L +VAPA+ G +++K A TPL+ L L HEA
Sbjct: 119 F-TTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA 177
Query: 249 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVT---LE 305
GLP G V A L + V SF G + ++ L +S L P T LE
Sbjct: 178 GLPEGWCQAVPCENAVA-EKLVTDPRVAFFSFIG---SARVGWML--RSKLAPGTRCALE 231
Query: 306 LGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 365
GG +P I+ AD+D + FY+ GQ C + R +V + D+F ++ A A +
Sbjct: 232 HGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEK 291
Query: 366 RIVGDPFKSGVEQGP 380
+VGDP E GP
Sbjct: 292 LVVGDPTDPDTEVGP 306
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 2e-39
Identities = 93/319 (29%), Positives = 145/319 (45%), Gaps = 16/319 (5%)
Query: 70 ASGKTFPVYDPRTAEVIANVAEGDAEDID---RAVATARKAFDEGPWPKMTPYERSRIML 126
A+G +P + IA V E ED + RA A K + + P PK R I+
Sbjct: 31 ANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPK-----RGEIVR 85
Query: 127 RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-G 185
+ D + ++ L L + GK + + EV ++ + + G + +++G +P +
Sbjct: 86 QIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERP 144
Query: 186 NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLF 245
N+ + + P+G+ G I +NFP + W AL CGN +V K A TPL + + KL
Sbjct: 145 NHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLV 204
Query: 246 HEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301
E LP + G G G A+A + +SFTG G +VQ+ +
Sbjct: 205 AEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQ-TVNARFGK 262
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
LEL G + I+ DDAD+ AV FA GQ C R +HE +YD+ +E+
Sbjct: 263 CLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLT 322
Query: 362 RAMRRIVGDPFKSGVEQGP 380
+ +GDP + G GP
Sbjct: 323 VYKQVKIGDPLEKGTLLGP 341
|
Length = 508 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 1e-38
Identities = 93/273 (34%), Positives = 131/273 (47%), Gaps = 23/273 (8%)
Query: 105 RKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA-ALETWNNGKPYVQSLKSEVPMVV 163
+ AF P P + ER + R L+ N + LA A+ + ++L +E+ +
Sbjct: 8 KAAFLANPPPSLE--ERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSI 65
Query: 164 RLLHYY----AGW--ADKIH-GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216
+ + W + H GL ++ ++P+GV G IVPWN+PL L +
Sbjct: 66 AGIKHARKHLKKWMKPSRRHVGLLFLPAKAE-VE--YQPLGVVGIIVPWNYPLYL---AL 119
Query: 217 AP---ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHM 273
P AL GN +++K +E TP T+ +A+L E + VV+G G AA S +
Sbjct: 120 GPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTG-GADVAAAF-SSL 176
Query: 274 DVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFY 333
D L FTG G+ V AA+ NL PVTLELGGKSP II DAD+ +A E F
Sbjct: 177 PFDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLL 235
Query: 334 NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366
N GQ C A V E +EFV AKA +
Sbjct: 236 NAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKM 268
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 4e-37
Identities = 106/320 (33%), Positives = 160/320 (50%), Gaps = 15/320 (4%)
Query: 47 EPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARK 106
+P +PP NLI G FV++ S V +P T EV++ V E+ AV+ A++
Sbjct: 107 QPQMPP----RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQ 162
Query: 107 AFDEGPWPKMTPYE-RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRL 165
AF P + TP R R+ML+ +LI KNM++LA T GK S ++ + +
Sbjct: 163 AF---PLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEV 218
Query: 166 LHYYAGWADKIHGLTVPGDGN-YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGN 224
+ + G A G +P N ++ EP+GV I P+NFP ++ W A+TCGN
Sbjct: 219 VEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGN 278
Query: 225 TIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHC 284
T +LK +E+ P ++ +A+L EAGLP GVLN+V G T A+ D+ +SF G
Sbjct: 279 TFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSN 337
Query: 285 DTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSR 344
G + AA K + +G K+ ++ DA++D + A F GQ C A S
Sbjct: 338 TAGMHIYARAAAKG-KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALST 396
Query: 345 TYV---HERVYDEFVEKAKA 361
+ D+ VE+AKA
Sbjct: 397 VVFVGDAKSWEDKLVERAKA 416
|
Length = 604 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 2e-36
Identities = 94/280 (33%), Positives = 142/280 (50%), Gaps = 22/280 (7%)
Query: 69 AASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIML 126
A+G+ PV +P +++ V E ++++A+ +A A P W P ER+ I+
Sbjct: 655 VAAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNA---APIWFATPPAERAAILE 711
Query: 127 RAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 186
RAADL+E M+ L L GK + ++ +EV V L YYAG +
Sbjct: 712 RAADLMEAQMQTLMGLLVREAGKTFSNAI-AEVREAVDFLRYYAGQVR----------DD 760
Query: 187 YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246
+ T H P+G I PWNFPL +FT +VA AL GN+++ K AEQTPL A ++
Sbjct: 761 FDNDT-HRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILL 819
Query: 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE-----LAAKSNLKP 301
EAG+P GV+ ++ G G T GAAL + V + FTG + +++Q L + P
Sbjct: 820 EAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIP 879
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA 341
+ E GG++ I+ A +Q V + F + GQ C A
Sbjct: 880 LIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSA 919
|
Length = 1318 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 1e-35
Identities = 73/185 (39%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAP---ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL 250
EP GV I PWN+P L +AP A+ GNT VLK +E TP T+ +AK+ E
Sbjct: 99 EPYGVVLIIAPWNYPFQL---ALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-F 154
Query: 251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310
+ VV G L D + FTG GKIV E AAK +L PVTLELGGKS
Sbjct: 155 DEEYVAVVEGGVEENQELLDQKFD--YIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKS 211
Query: 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370
P I+ +DA++ A + + F N GQ C A VHE V ++F+++ K + D
Sbjct: 212 PCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGED 271
Query: 371 PFKSG 375
P +S
Sbjct: 272 PLESP 276
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 5e-34
Identities = 87/245 (35%), Positives = 117/245 (47%), Gaps = 18/245 (7%)
Query: 125 MLRAADLIEKNMEEL-AALETWNNGKPYVQSLKSEVPMVV-------RLLHYYAGWADKI 176
L+ A I EE+ AAL KP + +E+ V+ + L +
Sbjct: 28 RLKKA--ILARREEIIAALAADF-RKPAAEVDLTEILPVLSEINHAIKHLKKWMKPKRVR 84
Query: 177 HGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
L + G I+ +EP GV I PWN+P L + A+ GNT +LK +E TP
Sbjct: 85 TPLLLFGT-KSKIR--YEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPH 141
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
T+ +AK+ EA + V G A A L + D + FTG GKIV AAK
Sbjct: 142 TSAVIAKIIREA-FDEDEVAVFEGDAEVAQALLE--LPFDHIFFTGSPAVGKIVMAAAAK 198
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+L VTLELGGKSP I+ + AD+ +A + + F N GQ C A +VHE V D FV
Sbjct: 199 -HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFV 257
Query: 357 EKAKA 361
E KA
Sbjct: 258 EHLKA 262
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 3e-32
Identities = 92/294 (31%), Positives = 137/294 (46%), Gaps = 24/294 (8%)
Query: 93 DAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEEL-AALETWNNGKP 150
+ E I V +++F G K P E + LR ++E+N +E A+ + G+
Sbjct: 5 NPEIIPPIVKKLKESFLTG---KTRPLEFRKQQLRNLLRMLEENKQEFSEAVHK-DLGRH 60
Query: 151 YVQSLKSEVPMVVRLLHYYAGWADK--------IHGLTVPGDGNYHIQTLHEPIGVAGQI 202
++ +EV + V + + D+ G+ PG EP+GV I
Sbjct: 61 PFETKMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYII----PEPLGVVLVI 116
Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262
WN+PL L +A A+ GNT+VLK +E +P T+ +AKL + L P + V+ G
Sbjct: 117 GAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEGGV 175
Query: 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQ 322
L D + FTG GK+V + AA+ NL P TLELGGKSP I+ ++
Sbjct: 176 EVTTELLKEPFDH--IFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKV 232
Query: 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG-DPFKSG 375
A + F N GQ C A VH + D+F+E K A++ G DP KS
Sbjct: 233 AARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALK-EAIKEFFGEDPKKSE 285
|
Length = 493 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 5e-32
Identities = 95/316 (30%), Positives = 143/316 (45%), Gaps = 25/316 (7%)
Query: 79 DPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138
+P T E ++ + A+DI+ A+ A F + W + R++ + + EE
Sbjct: 13 NPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARSEE 70
Query: 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYA--GWADKIHGLTVPGDGNYHIQTLHEPI 196
+A + T GKP Q+ ++EV L +YA G A T+ + I+ + P+
Sbjct: 71 MAQMITREMGKPINQA-RAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIE--YRPL 127
Query: 197 GVAGQIVPWNFPLLLFTWKV----APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP 252
G I+PWNFPL W+V P L GN +LK A A +A++F +AG+P
Sbjct: 128 GTILAIMPWNFPL----WQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQ 183
Query: 253 GVLNVVSGYGPTAGAALASHMDVDK----LSFTGHCDTGKIVQELAAKSNLKPVTLELGG 308
GV ++ A S M D ++ TG G + A + LK LELGG
Sbjct: 184 GVYGWLN-----ADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAA-LKKCVLELGG 237
Query: 309 KSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368
PFI+ +DAD++ AV+ A + N GQ C A R + E + F E+ A A +
Sbjct: 238 SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKM 297
Query: 369 GDPFKSGVEQGPQVLF 384
GDP GP F
Sbjct: 298 GDPRDEENALGPMARF 313
|
Length = 462 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 2e-31
Identities = 101/355 (28%), Positives = 154/355 (43%), Gaps = 25/355 (7%)
Query: 28 RESSRARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDP-RTAEVI 86
R S R + R + + P+ +I G+ V SG+ P V+
Sbjct: 9 RPGSPERDLLRKALKELKGRMEEIPL-------VIGGEEV-WTSGERIYQVSPHNHQAVL 60
Query: 87 ANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE-KNMEELAALETW 145
A E ++AV A A E W + Y+R+ I L+AADL+ E+ A
Sbjct: 61 AKATNATEELANKAVEAALDAKKE--WSLLPFYDRAAIFLKAADLLSGPYRAEILAATML 118
Query: 146 NNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG---LTVPGDGNYHIQTLHEPI-GVAGQ 201
K Q+ V ++ + A +A +++ ++ PG+ N +T + P+ G
Sbjct: 119 GQSKTVYQAEIDAVAELIDFFRFNAKYARELYEQQPISAPGEWN---RTEYRPLEGFVYA 175
Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261
I P+NF + APAL GNT++ K ++ L+ V ++ EAGLPPGV+N V G
Sbjct: 176 ISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAMLSNYLVMRILEEAGLPPGVINFVPGD 234
Query: 262 GPTAGAALASHMDVDKLSFTGHCDT-----GKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
GP + + D+ + FTG T ++ Q L N + E GGK ++
Sbjct: 235 GPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETGGKDFHVVHP 294
Query: 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
ADV+ V F QGQ C A SR YV ++ F + A R VGDP
Sbjct: 295 SADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDP 349
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-29
Identities = 92/307 (29%), Positives = 135/307 (43%), Gaps = 31/307 (10%)
Query: 83 AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE-KNMEELAA 141
A V+A DA +++A+ A +A E W +M +R+ I L+AADL+ K EL A
Sbjct: 57 AHVLATYHYADAALVEKAIEAALEARKE--WARMPFEDRAAIFLKAADLLSGKYRYELNA 114
Query: 142 LETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQ 201
GK Q+ ++ L + +A+++ Y Q L P GV +
Sbjct: 115 ATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEEL----------YAQQPLSSPAGVWNR 164
Query: 202 ------------IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG 249
+ P+NF + APAL GN ++ K ++ L+ V K+ EAG
Sbjct: 165 LEYRPLEGFVYAVSPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAVLSNYLVYKILEEAG 223
Query: 250 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT-----GKIVQELAAKSNLKPVTL 304
LPPGV+N V G GP G + + + L FTG T +I + L +
Sbjct: 224 LPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVG 283
Query: 305 ELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAM 364
E GGK+ ++ ADVD V F QGQ C A SR YV E ++ E E+
Sbjct: 284 ETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELK 343
Query: 365 RRIVGDP 371
+GDP
Sbjct: 344 EIKMGDP 350
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 1e-27
Identities = 95/291 (32%), Positives = 132/291 (45%), Gaps = 34/291 (11%)
Query: 100 AVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEE-LAALETWNNGKPYVQSLKS 157
AV AR+AF G K P E L A ++E+N +E + AL + KP +++ S
Sbjct: 3 AVRRAREAFSSG---KTRPLEFRIQQLEALLRMLEENEDEIVEALAK-DLRKPKFEAVLS 58
Query: 158 EVPMVVR----LLHYYAGWADKIH---GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 210
E+ +V + W L D Y I EP+GV I WN+PL
Sbjct: 59 EILLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVY-IY--KEPLGVVLIIGAWNYPLQ 115
Query: 211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLP----PGVLNVVSGYGPTAG 266
L + A+ GN +V+K +E +P TA +A+L +P VV G
Sbjct: 116 LTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAEL-----IPKYLDKECYPVVLGGVEETT 170
Query: 267 AALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326
L D + +TG GKIV + AAK +L PVTLELGGKSP + D+D A
Sbjct: 171 ELLKQRFD--YIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARR 227
Query: 327 AHFALFYNQGQCCCAGSRTYV--HERVYDEFVEKAKARAMRRIVG-DPFKS 374
+ F N GQ C A YV V ++FVE K + ++ G DP +S
Sbjct: 228 IAWGKFINAGQTCIAPD--YVLCTPEVQEKFVEALK-KTLKEFYGEDPKES 275
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 3e-26
Identities = 84/256 (32%), Positives = 117/256 (45%), Gaps = 27/256 (10%)
Query: 99 RAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEEL-AALETWNNGKPYVQSLK 156
R V R+ F G + E + L+ L+++N +++ AAL + GKP +S +
Sbjct: 3 RLVRELRETFRSG---RTRSAEWRKSQLKGLLRLVDENEDDIFAALRQ-DLGKPSAESFR 58
Query: 157 SEVPMVVR--------LLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFP 208
EV ++V L + A K T P + + EP+GV I WNFP
Sbjct: 59 DEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKA----EIVSEPLGVVLVISAWNFP 114
Query: 209 LLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAA 268
LL V A+ GN +VLK +E P T+ +AKL L + V+ G G A
Sbjct: 115 FLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLI-PEYLDTKAIKVIEG-GVPETTA 172
Query: 269 LASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVE--- 325
L DK+ FTG G+I+ AAK +L PVTLELGGK P I+ D+ AV
Sbjct: 173 LLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIA 230
Query: 326 LAHFALFYNQGQCCCA 341
+ N GQ C A
Sbjct: 231 GGKWGC--NNGQACIA 244
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 12/278 (4%)
Query: 99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSE 158
RA+ A ++ +R+ + R + ++AA GK ++ +
Sbjct: 3 RALLAADI--STKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAENIC 60
Query: 159 VPMVVRLLHYYAGWADKIHGLTV---PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215
V + ++ +I P G I +NFPL + +
Sbjct: 61 GDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQ 120
Query: 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMD 274
+A AL GN +++K + + +L H AG LPP + +++G G T AL H +
Sbjct: 121 LAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-MQALLLHPN 179
Query: 275 VDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD-VDQAVELAHFALFY 333
+ FTG ++LA + + LEL G + ++ DA VD +
Sbjct: 180 PKMVLFTGSSRVA---EKLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTA 236
Query: 334 NQGQCCCAGSRTYVHERVYDE-FVEKAKARAMRRIVGD 370
GQ C A S +V E VEK KA RR + D
Sbjct: 237 CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLED 274
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 6e-19
Identities = 71/251 (28%), Positives = 111/251 (44%), Gaps = 29/251 (11%)
Query: 90 AEGDAEDIDRAVATARKAFDEG-----PWPKMTPYERSRIMLRAADLIEKNMEELAALET 144
E E ++ +VA R+ ++ G W K + + +LR L++ N E +
Sbjct: 1 EEAPGETLEGSVAELRETYESGRTRSLEWRK----SQLKGLLR---LLKDNEEAIFKALH 53
Query: 145 WNNGKPYVQSLKSEVPMVVR----LLHYYAGWADKIHG----LTVPGDGNYHIQTLHEPI 196
+ GK V++ + EV ++ + L W + P + + EP+
Sbjct: 54 QDLGKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATA----EVVPEPL 109
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256
GV WNFP+ L + A+ GN +VLK +E P T+ ++A L +
Sbjct: 110 GVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANI-PKYLDSKAVK 168
Query: 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316
V+ G GP G L H DK+ FTG G+I+ AAK +L PV LELGGK P I D
Sbjct: 169 VIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCP-CIVD 224
Query: 317 DADVDQAVELA 327
+ ++A
Sbjct: 225 SLSSSRDTKVA 235
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 1e-18
Identities = 96/348 (27%), Positives = 146/348 (41%), Gaps = 38/348 (10%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
N + G++ A SG P++DP T E + V D+ A A AR+ G +
Sbjct: 6 ANYVAGRWQ-AGSGAGTPLFDPVTGEELVRV-SATGLDLAAAFAFARE--QGGAALRALT 61
Query: 119 YERSRIMLRA-ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
Y + +L A +++ N + + T N+G S ++ + L YYA +
Sbjct: 62 YAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDS-AVDIDGGIFTLGYYAKLGAALG 120
Query: 178 GLTVPGDGN---------YHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227
+ DG + Q + P GVA I +NFP K APAL G ++
Sbjct: 121 DARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVI 180
Query: 228 LKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMD-VDKLSFTGHCD 285
+K A T + K AG LP G L+VV G + A L H+ D +SFTG +
Sbjct: 181 VKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SSAGLLDHLQPFDVVSFTGSAE 236
Query: 286 TGKIVQELAA--KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ-------- 335
T +++ A + +++ V +E + ++ DA F LF +
Sbjct: 237 TAAVLRSHPAVVQRSVR-VNVEADSLNSALLGPDAAPGSEA----FDLFVKEVVREMTVK 291
Query: 336 -GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
GQ C A R +V E +YD E AR + VG+P GV GP V
Sbjct: 292 SGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLV 339
|
Length = 521 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 85.5 bits (211), Expect = 4e-18
Identities = 80/256 (31%), Positives = 119/256 (46%), Gaps = 21/256 (8%)
Query: 94 AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME-ELAALETWNNGKPYV 152
A D V R++FD+G YE L+ +I N E E+ A + GKP +
Sbjct: 9 AADASILVTELRRSFDDG---VTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPEL 65
Query: 153 QS-------LKSEVPMVVRLL-HYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVP 204
+S L++ + + ++ L ++ A K T P + + EP+GV I
Sbjct: 66 ESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASA----EIVSEPLGVVLVISA 121
Query: 205 WNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPT 264
WN+P LL V A++ GN +VLK +E P ++ +AKL E L + VV G
Sbjct: 122 WNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLL-EQYLDSSAVRVVEGAVTE 180
Query: 265 AGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAV 324
A L DK+ +TG G+++ AAK +L PV LELGGKSP ++ D D+ V
Sbjct: 181 TTALLEQKW--DKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTV 237
Query: 325 ELAHFALF-YNQGQCC 339
+ N GQ C
Sbjct: 238 RRIIAGKWGCNNGQAC 253
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 2e-15
Identities = 102/362 (28%), Positives = 146/362 (40%), Gaps = 66/362 (18%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMT 117
++ + GQ+ A +G ++D T EV+A V+ + D AVA AR+ GP +T
Sbjct: 2 QSYVAGQWH-AGTGDGRTLHDAVTGEVVARVS-SEGLDFAAAVAYARE--KGGPALRALT 57
Query: 118 PYERSRIMLRA-ADLIEKNMEELAALETWNNGKP---------------YVQSLKSEVPM 161
+ER+ ML+A A + + E+L AL SL
Sbjct: 58 FHERAA-MLKALAKYLMERKEDLYALSAATGATRRDSWIDIDGGIGTLFAYASLGRRELP 116
Query: 162 VVRLLHYYAGWADKIHGLTVPGDGNY---HIQTLHEPI-GVAGQIVPWNFPLLLFTW--- 214
L + L+ DG + HI T P GVA I +NFP+ W
Sbjct: 117 NAHFLV-----EGDVEPLSK--DGTFVGQHILT---PRRGVAVHINAFNFPV----WGML 162
Query: 215 -KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASH 272
K APAL G +++K A T V K E+G LP G L ++ G + G L
Sbjct: 163 EKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICG---SVGDLLDHL 219
Query: 273 MDVDKLSFTGHCDTGKIVQ---ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHF 329
+ D ++FTG T ++ + A+S E + I+ DA F
Sbjct: 220 GEQDVVAFTGSAATAAKLRAHPNIVARS--IRFNAEADSLNAAILGPDATPGTP----EF 273
Query: 330 ALFYNQ---------GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP 380
LF + GQ C A R +V E D +E KAR + +VGDP GV GP
Sbjct: 274 DLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGP 333
Query: 381 QV 382
V
Sbjct: 334 LV 335
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 3e-13
Identities = 87/326 (26%), Positives = 137/326 (42%), Gaps = 27/326 (8%)
Query: 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
NL+ G++ A++ T DP + +V + D ++I+ V + R+ G +
Sbjct: 1 NLVAGKWKGASNYTTLL--DPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNP 58
Query: 120 ER----SRIMLRAADLIEKNMEE--LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWA 173
ER + R A + K E A L K Q+L EV + + L +AG
Sbjct: 59 ERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAG-- 115
Query: 174 DKIH----GLTVPGDGNYHIQTLHE---PIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
D++ VPGD + Q P G I P+NFPL + ++ AL GN
Sbjct: 116 DQVRFLARSFNVPGD--HQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKP 173
Query: 227 VLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286
+LK + + +L H G+P ++++ GPT L + FTG +
Sbjct: 174 LLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKIL-LEANPRMTLFTG---S 229
Query: 287 GKIVQELAAKSNLKPVTLELGGKSPFIIFDD-ADVDQAVELAHFALFYNQGQCCCAGSRT 345
K+ + LA + + K V LE G I+ D +DVD + GQ C A S
Sbjct: 230 SKVAERLALELHGK-VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSIL 288
Query: 346 YVHER-VYDEFVEKAKARAMRRIVGD 370
+ HE V ++K KA A +R + D
Sbjct: 289 FAHENWVQAGILDKLKALAEQRKLED 314
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 3e-11
Identities = 98/348 (28%), Positives = 151/348 (43%), Gaps = 40/348 (11%)
Query: 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTP 118
+ ++G++ G+ PV D T EV+A V + D+ AVA AR+ GP +T
Sbjct: 3 SYLSGEWRTGQ-GEGVPVRDASTGEVLARVT-SEGLDVAAAVAWAREV--GGPALRALTF 58
Query: 119 YERSRIMLRA-ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-- 175
+ER+R ML+A A + + E L AL + + + L Y+ +
Sbjct: 59 HERAR-MLKALAQYLSERKEALYALAATTGATRRDNWVDIDGGIGT--LFTYSSLGRREL 115
Query: 176 ------IHGLTVP--GDGNYHIQTLHEPI-GVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
P DG++ + + P GVA QI +NFP+ K APA G
Sbjct: 116 PDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPT 175
Query: 227 VLKSAEQTPLTALYVAKLFHEAGL-PPGVLNVVSGYGPTAGAALASHMDV-DKLSFTGHC 284
+ K A T A + + E+GL P G L ++ G +AG L H+D D ++FTG
Sbjct: 176 LAKPATPTAYVAEALVRTMVESGLLPEGSLQLICG---SAG-DLLDHLDHRDVVAFTGSA 231
Query: 285 DTGKIVQELAAKSNLK----PVTLELGGKSPFIIFDDADVDQAVELAHFA------LFYN 334
T L A N+ E + I+ +DA D+ E FA L
Sbjct: 232 ATA---DRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEP-EFDLFAQEIVRELTIK 287
Query: 335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
GQ C A R V + + + ++ +AR + ++GDP + GV+ GP V
Sbjct: 288 AGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLV 335
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 3e-10
Identities = 69/215 (32%), Positives = 92/215 (42%), Gaps = 38/215 (17%)
Query: 188 HIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT-PLTALYVAKLFH 246
HI T E GVA I +NFP+ K+APA G ++K A T LT V +L
Sbjct: 143 HILTPLE--GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVV-RLIV 199
Query: 247 EAG-LPPGVLNVVSGYGPTAGAALASHMDV-DKLSFTGHCDTGKIVQELAAKSNLKPVTL 304
E+G LP G L ++ G +AG L H+D D ++FTG T Q+L A N+
Sbjct: 200 ESGLLPEGALQLICG---SAGDLL-DHLDGQDVVTFTGSAATA---QKLRAHPNV----- 247
Query: 305 ELGGKSPFIIFDDAD--------VDQAVELAHFALFYNQ---------GQCCCAGSRTYV 347
+ PF +AD D F LF + GQ C A R V
Sbjct: 248 -VANSVPFTA--EADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIV 304
Query: 348 HERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+ D +E +AR + +VGDP GV G
Sbjct: 305 PRALVDAVIEALRARLAKVVVGDPRLEGVRMGALA 339
|
Length = 675 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 4e-10
Identities = 59/259 (22%), Positives = 97/259 (37%), Gaps = 24/259 (9%)
Query: 117 TPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL-----------KSEVPMVVRL 165
+R I+ A+ + + LA+ G Y++SL +S++ +
Sbjct: 14 HDEQRDLIINAIANALYDTRQRLASEAVSERGA-YIRSLIANWIAMMGCSESKLYKNIDT 72
Query: 166 LHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNT 225
I + +P +G +++ PIGV I+P PL T + N
Sbjct: 73 ERGITASVGHIQDVLLPDNGETYVRA--FPIGVTMHILPSTNPLSGIT-SALRGIATRNQ 129
Query: 226 IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALA----SHMDVDKLSFT 281
+ + P T +A LF A ++ Y P LA SH +D + T
Sbjct: 130 CIFRPHPSAPFTNRALALLFQAA-DAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVAT 188
Query: 282 GHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA 341
G D V S PV G SP ++ + AD ++A H + F++Q C +
Sbjct: 189 GGRD---AVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQ-NACAS 244
Query: 342 GSRTYVHERVYDEFVEKAK 360
YV + V D E+ K
Sbjct: 245 EQNLYVVDDVLDPLYEEFK 263
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 6e-09
Identities = 68/253 (26%), Positives = 102/253 (40%), Gaps = 31/253 (12%)
Query: 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL---AALETWNNGKPYVQ 153
+D A A A AF+ + ++P R+ + AD IE +EL A ET G P +
Sbjct: 1 VDAAAAAAAAAFES--YRALSPARRAAFLEAIADEIEALGDELVARAHAET---GLPEAR 55
Query: 154 SLKSEVPMVVRLLHYYA------GWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVP 204
L+ E+ L +A W D P ++ + P+G
Sbjct: 56 -LQGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGA 114
Query: 205 WNFPLLLFTWKV-----APALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVL 255
NFP + V A AL G +V+K+ P T+ VA+ A GLP GV
Sbjct: 115 SNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVF 171
Query: 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL-KPVTLELGGKSPFII 314
+++ G G G AL H + + FTG G+ + + AA P ELG +P I
Sbjct: 172 SLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFI 231
Query: 315 FDDADVDQAVELA 327
A ++ +A
Sbjct: 232 LPGALAERGEAIA 244
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 9/195 (4%)
Query: 183 GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVL----KSAEQTPLTA 238
GD N + EPIGV I P P +K +L N+I+ ++ + T A
Sbjct: 83 GDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAA 142
Query: 239 LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298
+ + AG P ++ + L + L TG G V + AA S+
Sbjct: 143 TLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVK-AAYSS 197
Query: 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358
KP G +P +I + AD+ +AV+ + ++ G C + V + VYDE +
Sbjct: 198 GKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257
Query: 359 AKARAMRRIVGDPFK 373
+ + ++ + +
Sbjct: 258 FEGQGAYKLTAEELQ 272
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.001
Identities = 67/288 (23%), Positives = 107/288 (37%), Gaps = 49/288 (17%)
Query: 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL---ET----WNNGK 149
+D V ARKA E + + + +I+ A EELA + ET K
Sbjct: 1 VDELVERARKAQRE--FATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVE-DK 57
Query: 150 PYVQSLKSEVPMVVRLLHYYAG-------WADKIHGLTVPGDGNYHIQTLHEPIGVAGQI 202
SE + + D+ G+ + EP+GV +
Sbjct: 58 VIKNHFASEY-----VYNDIKDMKTVGVIEEDEEKGIV----------EIAEPVGVIAAL 102
Query: 203 VPWNFPLLLFTWKVAPALTCGNTIVL----KSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
+P P +K AL N I+ ++ + + A + + AG P G++ +
Sbjct: 103 IPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWI 162
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG---GKSPFIIF 315
L H DVD + TG +V+ AA S+ KP +G G P I
Sbjct: 163 EEPSIELTQELMKHPDVDLILATG---GPGMVK--AAYSSGKPA---IGVGPGNVPAYID 214
Query: 316 DDADVDQAVE-LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKAR 362
+ AD+ +AV+ + F N G C + V + +YDE + K R
Sbjct: 215 ETADIKRAVKDIILSKTFDN-GTICASEQSVIVDDEIYDEVRAELKRR 261
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 393 | |||
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.92 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.82 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.62 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.82 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 97.02 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 96.45 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 93.33 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 91.94 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 88.5 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 88.13 |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-81 Score=639.58 Aligned_cols=383 Identities=81% Similarity=1.283 Sum_probs=361.5
Q ss_pred hhHhHHHhhhcccCCCCchhhhccCCCCcCCccccccccc-ccccCCCCCCCcCCcccceeCCeeeeCCCCCeeeeecCC
Q 016216 3 AARRISTLLSRSFPSASPSLLRSLGRESSRARGISRFSTA-AVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPR 81 (393)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~ 81 (393)
|++|+++||+|+++++++.+.++.+|++..+|.++||+|. +++++.+.+++++.+.++||||+|+...++++++++||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~ 81 (538)
T PLN02466 2 AARRISSLLSRSLSASSSALLRSRGRNGGRGRGIRRFSTAAAAVEEPITPPVQVSYTQLLINGQFVDAASGKTFPTLDPR 81 (538)
T ss_pred CchHHHHHHHHHhhcccHHHhhhccccCCCCccccccccccccccCcCCCccccccccceECCEEecCCCCCeEEeECCC
Confidence 5678999999999888777899999999999999999995 559999999999999999999999987778999999999
Q ss_pred CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHH
Q 016216 82 TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPM 161 (393)
Q Consensus 82 tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~ 161 (393)
||+++++++.++.+|+++|+++|++||+.+.|+.++.++|.++|+++++.|+++.++|++++++|+|||+.+++..|+..
T Consensus 82 tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~ 161 (538)
T PLN02466 82 TGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPM 161 (538)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999985569999999999999999999999999999999999999999887669999
Q ss_pred HHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHH
Q 016216 162 VVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241 (393)
Q Consensus 162 ~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l 241 (393)
+++.++||+.+.++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+
T Consensus 162 ~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l 241 (538)
T PLN02466 162 FARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYA 241 (538)
T ss_pred HHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHH
Confidence 99999999999888877665543444568899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHH
Q 016216 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVD 321 (393)
Q Consensus 242 ~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld 321 (393)
.+++.++|+|+|+||+++|.+.+.++.|..|++||.|+||||+++|+.|++.+++.++||+++|+|||||+||++|||+|
T Consensus 242 ~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~ 321 (538)
T PLN02466 242 AKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVD 321 (538)
T ss_pred HHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHH
Confidence 99999999999999999997778899999999999999999999999999998854789999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 322 QAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 322 ~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
.|++.+++++|+|+||.|++++|+|||+++||+|+++|++++.++++|||+|+++++||++++.
T Consensus 322 ~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~ 385 (538)
T PLN02466 322 KAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSE 385 (538)
T ss_pred HHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999864
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-79 Score=591.98 Aligned_cols=326 Identities=62% Similarity=1.000 Sum_probs=318.9
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|++..++++++++||.||+++++|++++.+||+.+|++|++||+.+.|++++..+|.++|+++++++++++++
T Consensus 22 ~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~ 101 (501)
T KOG2450|consen 22 GLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADV 101 (501)
T ss_pred heeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHH
Confidence 89999999999999999999999999999999999999999999999999966799999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
|+.+.+.+.|||+..++..++..+++.+|||++|++++++...+.+.....++.++|+|||+.|.|||||+.+..|+++|
T Consensus 102 lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaP 181 (501)
T KOG2450|consen 102 LAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAP 181 (501)
T ss_pred HhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhh
Confidence 99999999999999999779999999999999999999888888888889999999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+||++++|+++..++++++++|+|+|++|+|+|.|.+.+.+|.+|++|++|+||||+.+|+.|++.+++++
T Consensus 182 ALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~~n 261 (501)
T KOG2450|consen 182 ALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAESN 261 (501)
T ss_pred HHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhc-CccCCCCCCCCc
Q 016216 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPFKSGVE 377 (393)
Q Consensus 299 ~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~G~p~~~~~~ 377 (393)
+||+++|||||+|.||++|||+|.|++.++.+.|+|+||+|++.+|+|||+++||+|+++++++.++ +++|||+++++.
T Consensus 262 ~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~ 341 (501)
T KOG2450|consen 262 LKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTE 341 (501)
T ss_pred CceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999976 999999999999
Q ss_pred cCccccc
Q 016216 378 QGPQVLF 384 (393)
Q Consensus 378 ~Gpli~~ 384 (393)
+||++++
T Consensus 342 qG~~i~~ 348 (501)
T KOG2450|consen 342 QGPQISK 348 (501)
T ss_pred cccccCH
Confidence 9999986
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-76 Score=549.77 Aligned_cols=326 Identities=40% Similarity=0.667 Sum_probs=314.0
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..+.||+|+|+++.++++|++.||.+||+|+.|++++.+|.+.|+++|.+||+ .|+.++..+|.++|+++.++|.+|.
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~--s~~~~takeRs~lLrkwy~Li~en~ 100 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFK--SYRNLTAKERSALLRKWYELIMENK 100 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhch
Confidence 46889999999998899999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
|+|++++++|.|||+.++. +|+..+..+++||+++++++.+...+.. ......+.++|+||+++|+|||||..+...+
T Consensus 101 ddLa~iiTlE~GKpL~eA~-gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK 179 (503)
T KOG2451|consen 101 DDLATIITLENGKPLGEAK-GEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRK 179 (503)
T ss_pred HHHHHHHhhhcCCchhhcc-ceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhH
Confidence 9999999999999999998 5999999999999999999999987643 4566788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC---CchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSG---YGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g---~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
..+||++||+||+||++.||++++.++++..+||+|+|++|+|++ +..++++.|+.+|.|++|+||||+.+|+.+++
T Consensus 180 ~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~ 259 (503)
T KOG2451|consen 180 AGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMA 259 (503)
T ss_pred HHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHH
Confidence 999999999999999999999999999999999999999999996 34588999999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
+.+. .+|++.+||||+.|+||++|||+|+|++.....+|.|+||.|.+.+|+|||++|||+|+++|.++++++++||-+
T Consensus 260 qsas-tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~ 338 (503)
T KOG2451|consen 260 QSAS-TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL 338 (503)
T ss_pred hhhh-hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccCC
Q 016216 373 KSGVEQGPQVLFSA 386 (393)
Q Consensus 373 ~~~~~~Gpli~~~~ 386 (393)
|+++.+||||++.+
T Consensus 339 ~~~tt~GpLIne~a 352 (503)
T KOG2451|consen 339 DPGTTQGPLINEKA 352 (503)
T ss_pred CCCCccCCccCHHH
Confidence 99999999999764
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-72 Score=566.61 Aligned_cols=320 Identities=52% Similarity=0.816 Sum_probs=305.7
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|++... +++++||.||+++++++.++.+|+++|+++|+++|+ .|+.++..+|.++|++++++|+++.++
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~--~W~~~~~~eR~~iL~~~a~~l~~~~~e 77 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFE--AWSRLSAEERAAILRRIADLLEARAEE 77 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 6799999997644 999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
|++++++|+|||+.+++. |+..+++.++||+..++++.+...+...+...++.++|+|||++|+|||||+++.+|+++|
T Consensus 78 la~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~ap 156 (472)
T COG1012 78 LAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAP 156 (472)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHH
Confidence 999999999999999986 7999999999999999988877655444677899999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.+.++.|+.||+|+.|+||||+++|+.|++.+++ +
T Consensus 157 ALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~-~ 235 (472)
T COG1012 157 ALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAA-N 235 (472)
T ss_pred HHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhh-c
Confidence 999999999999999999999999999999999999999999777799999999999999999999999999999997 9
Q ss_pred CccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhc-CccCCCCCCCCc
Q 016216 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPFKSGVE 377 (393)
Q Consensus 299 ~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~G~p~~~~~~ 377 (393)
+||+++|||||||+||++|||+|.|++.+++++|+|+||.|++.+|+|||+++||+|+++|.++ ++ +++|||.|+.|+
T Consensus 236 ~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~ 314 (472)
T COG1012 236 LKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTD 314 (472)
T ss_pred CCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 65 899999999999
Q ss_pred cCcccccC
Q 016216 378 QGPQVLFS 385 (393)
Q Consensus 378 ~Gpli~~~ 385 (393)
+||||++.
T Consensus 315 ~Gpli~~~ 322 (472)
T COG1012 315 LGPLISEE 322 (472)
T ss_pred cCCCCCHH
Confidence 99999864
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-71 Score=564.92 Aligned_cols=324 Identities=39% Similarity=0.669 Sum_probs=306.6
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 11 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 88 (482)
T PRK11241 11 QQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERANILRRWFNLMMEHQD 88 (482)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3689999999766678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|++++++|+|||+.+++. |+..+++.++|++.+.++..+...+.. .+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (482)
T PRK11241 89 DLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKA 167 (482)
T ss_pred HHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHH
Confidence 9999999999999999984 999999999999998887765544432 23446788999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.++++.|+.|++|+.|+||||+++|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~ 247 (482)
T PRK11241 168 GPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK 247 (482)
T ss_pred HHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999988
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus 248 -~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 326 (482)
T PRK11241 248 -DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV 326 (482)
T ss_pred -cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||||++.
T Consensus 327 ~~Gpli~~~ 335 (482)
T PRK11241 327 TIGPLIDEK 335 (482)
T ss_pred CcCCCCCHH
Confidence 999999864
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-71 Score=569.90 Aligned_cols=326 Identities=30% Similarity=0.443 Sum_probs=306.1
Q ss_pred cCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016216 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133 (393)
Q Consensus 54 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~ 133 (393)
.....++||||+|+...++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 110 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~k~a~~L~ 187 (604)
T PLN02419 110 MPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVMLKFQELIR 187 (604)
T ss_pred cccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34456889999999876678899999999999999999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHH
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
++.++|++++++|+|||+.+++. |+..+++.++||++++++..+...+. ..+...++.++|+|||++|+|||||+...
T Consensus 188 ~~~~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~ 266 (604)
T PLN02419 188 KNMDKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIP 266 (604)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHH
Confidence 99999999999999999999985 99999999999999998777654442 23445678899999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|++ +.++.|+.|++|+.|+||||+++|+.|++
T Consensus 267 ~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~ 345 (604)
T PLN02419 267 LWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYA 345 (604)
T ss_pred HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999954 67889999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
.+++ +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.
T Consensus 346 ~Aa~-~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~ 423 (604)
T PLN02419 346 RAAA-KGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGS 423 (604)
T ss_pred HHhc-cCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCC
Confidence 9887 89999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++||||++.
T Consensus 424 d~~t~~GPlis~~ 436 (604)
T PLN02419 424 EPDADLGPVISKQ 436 (604)
T ss_pred CCCCCccCCCCHH
Confidence 9999999999853
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-71 Score=564.64 Aligned_cols=331 Identities=59% Similarity=0.947 Sum_probs=309.9
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
+...++||||+|+.+.++.+++++||.||+++++++.++.+|++++++.|++||+.+.|+.++.++|.++|+++++.|++
T Consensus 18 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 97 (501)
T PLN02766 18 IKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEE 97 (501)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHH
Confidence 34457899999998767789999999999999999999999999999999999974469999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
+.++|++++++|+|||..+++..|+..+++.++|++...++..+...+...+...++.++|+|||++|+|||||+...++
T Consensus 98 ~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 177 (501)
T PLN02766 98 HIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFM 177 (501)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHHHH
Confidence 99999999999999999888756999999999999998887766544433344567889999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+.++.|+.|+++|.|.||||+++|+.|++.+
T Consensus 178 ~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~a 257 (501)
T PLN02766 178 KVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAA 257 (501)
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997788899999999999999999999999999998
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
++.+++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+++
T Consensus 258 a~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~ 337 (501)
T PLN02766 258 ATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDP 337 (501)
T ss_pred hhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 84488999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++|||+++.
T Consensus 338 ~~~~Gpli~~~ 348 (501)
T PLN02766 338 RARQGPQVDKQ 348 (501)
T ss_pred CCCCCCCCCHH
Confidence 99999999853
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-70 Score=556.40 Aligned_cols=330 Identities=76% Similarity=1.249 Sum_probs=309.6
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
++.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.+.|+.++.++|.++|+++++.|+++
T Consensus 2 ~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 81 (476)
T cd07142 2 KHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKH 81 (476)
T ss_pred CcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHh
Confidence 45678999999976677899999999999999999999999999999999999744599999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
.++|++++++|+|||..+++..|+..+++.++|++.+.++..+...+...+...+..++|+|||++|+|||||+...+++
T Consensus 82 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 161 (476)
T cd07142 82 ADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK 161 (476)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence 99999999999999999887569999999999999998887766555333345678899999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.+.+..|..|++++.|+||||+++|+.|++.++
T Consensus 162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa 241 (476)
T cd07142 162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA 241 (476)
T ss_pred HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977778999999999999999999999999999988
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++++
T Consensus 242 ~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 321 (476)
T cd07142 242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKG 321 (476)
T ss_pred HcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 54789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 322 ~~~Gpli~~~ 331 (476)
T cd07142 322 VEQGPQVDKE 331 (476)
T ss_pred CcCCcCcCHH
Confidence 9999999854
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-69 Score=551.90 Aligned_cols=327 Identities=45% Similarity=0.804 Sum_probs=307.0
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.+.|+.++.++|.++|+++++.|+++.++
T Consensus 7 ~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 86 (486)
T cd07140 7 QLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEE 86 (486)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 68999999976677899999999999999999999999999999999999744699999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC----CCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
|++++++|+|||..++...|+..+++.++||+.+.++..+...+.. .+...+..++|+|||++|+|||||+...++
T Consensus 87 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~ 166 (486)
T cd07140 87 LATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAW 166 (486)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHH
Confidence 9999999999999988756999999999999999888766554421 222467889999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|..|++|+.|+||||+.+|+.|++.+
T Consensus 167 ~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 246 (486)
T cd07140 167 KMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSC 246 (486)
T ss_pred HHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999998
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
+..+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+++
T Consensus 247 a~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~ 326 (486)
T cd07140 247 AVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDR 326 (486)
T ss_pred HhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCC
Confidence 85478999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++|||++..
T Consensus 327 ~~~~Gpli~~~ 337 (486)
T cd07140 327 STDHGPQNHKA 337 (486)
T ss_pred CCcCCCCcCHH
Confidence 99999999863
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-69 Score=550.37 Aligned_cols=327 Identities=44% Similarity=0.709 Sum_probs=307.6
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhc-----ccCCCCCCCHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAF-----DEGPWPKMTPYERSRIMLRAA 129 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~-----~~g~W~~~~~~~R~~~L~~~a 129 (393)
++..++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++|| + .|+.++..+|.++|++++
T Consensus 5 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~--~W~~~~~~~R~~~L~~~a 82 (503)
T PLN02467 5 VPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK--DWARTTGAVRAKYLRAIA 82 (503)
T ss_pred cCccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccc--hhhcCCHHHHHHHHHHHH
Confidence 344588999999987667899999999999999999999999999999999999 7 899999999999999999
Q ss_pred HHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccc---cCC-CCceEEEEEecceeEEEECCC
Q 016216 130 DLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV---PGD-GNYHIQTLHEPIGVAGQIVPW 205 (393)
Q Consensus 130 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~---~~~-~~~~~~~~~~P~Gvv~~i~p~ 205 (393)
+.|++++++|++++++|+|||+.+++. |+..+++.++||+.+.+++.+... ... .+...++.++|+|||++|+||
T Consensus 83 ~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 161 (503)
T PLN02467 83 AKITERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPW 161 (503)
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCC
Confidence 999999999999999999999999984 999999999999999988765532 111 234567899999999999999
Q ss_pred CccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChH
Q 016216 206 NFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285 (393)
Q Consensus 206 N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~ 285 (393)
|||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.++.|+.|++|+.|+||||+.
T Consensus 162 N~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~ 241 (503)
T PLN02467 162 NYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTA 241 (503)
T ss_pred ChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHH
Confidence 99999999999999999999999999999999999999999999999999999997778899999999999999999999
Q ss_pred HHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhc
Q 016216 286 TGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 365 (393)
Q Consensus 286 ~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~ 365 (393)
+|+.|++.++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus 242 ~g~~v~~~aa~-~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 320 (503)
T PLN02467 242 TGRKIMTAAAQ-MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKN 320 (503)
T ss_pred HHHHHHHHHhc-cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999887 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCccCcccccC
Q 016216 366 RIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 366 ~~~G~p~~~~~~~Gpli~~~ 385 (393)
+++|||.|+++++|||++..
T Consensus 321 l~~g~p~~~~~~~Gpli~~~ 340 (503)
T PLN02467 321 IKISDPLEEGCRLGPVVSEG 340 (503)
T ss_pred cCCCCCCCCCCCcCCCCCHH
Confidence 99999999999999999863
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-69 Score=548.24 Aligned_cols=323 Identities=41% Similarity=0.683 Sum_probs=302.6
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+ ++.+++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 78 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFA--EWGQTTPKARAECLLKLADVIEENAQ 78 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 368999999965 578899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|++++++|+|||..++...|+..+++.++|++...+.+.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 79 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 158 (472)
T TIGR03374 79 VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 158 (472)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHH
Confidence 9999999999999988865699999999999998887665542221 123456789999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.++++.|+.|++||.|.||||+++|+.|++.+++
T Consensus 159 ~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 237 (472)
T TIGR03374 159 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP 237 (472)
T ss_pred HHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999985 99999999999777889999999999999999999999999999987
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||++++|+|+++|+++++++++|||+++++
T Consensus 238 -~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~ 316 (472)
T TIGR03374 238 -SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDEST 316 (472)
T ss_pred -cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++|||++..
T Consensus 317 ~~Gpli~~~ 325 (472)
T TIGR03374 317 ELGPLSSLA 325 (472)
T ss_pred cCCCCCCHH
Confidence 999999863
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-69 Score=550.79 Aligned_cols=326 Identities=44% Similarity=0.742 Sum_probs=307.5
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQK--IWAAMTAMERSRILRRAVDILRER 82 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 445889999999776678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
.++|++++++|+|||..+++..|+..+++.++++++..+.+.+...+...+...+..++|+|||++|+|||||+...+++
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~ 162 (488)
T PRK13252 83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWK 162 (488)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHH
Confidence 99999999999999999987569999999999999988877665444333445678899999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|.++..+.+++.++|+|+|+||+++|.+. .++.|+.|+++|.|+||||+++|+.|.+.++
T Consensus 163 ~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa 241 (488)
T PRK13252 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241 (488)
T ss_pred HHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998665 8899999999999999999999999999988
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+++
T Consensus 242 ~-~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 320 (488)
T PRK13252 242 A-SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPA 320 (488)
T ss_pred h-cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 7 799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 321 ~~~gpli~~~ 330 (488)
T PRK13252 321 TNFGPLVSFA 330 (488)
T ss_pred CcccccCCHH
Confidence 9999999853
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-69 Score=549.66 Aligned_cols=324 Identities=46% Similarity=0.730 Sum_probs=306.5
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 25 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 102 (498)
T PLN02278 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFP--SWSKLTASERSKILRRWYDLIIANKE 102 (498)
T ss_pred ccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4789999999765678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|++++++|+|||..++.. |+..+++.++|++...++..+...+.. .+...++.++|+|||++|+|||||++..++++
T Consensus 103 ~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i 181 (498)
T PLN02278 103 DLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 181 (498)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHH
Confidence 9999999999999999885 999999999999999888766544432 23456778999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+.++.|+.|++|+.|+||||+++|+.|++.+++
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 261 (498)
T PLN02278 182 GPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261 (498)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777788999999999999999999999999999987
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+++++
T Consensus 262 -~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~ 340 (498)
T PLN02278 262 -TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGV 340 (498)
T ss_pred -cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||+++..
T Consensus 341 ~~Gpli~~~ 349 (498)
T PLN02278 341 TQGPLINEA 349 (498)
T ss_pred cCCCccCHH
Confidence 999999863
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-69 Score=549.20 Aligned_cols=322 Identities=27% Similarity=0.505 Sum_probs=301.7
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
.+.++||||+|+. ++.+++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 19 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 94 (508)
T PLN02315 19 RNLGCYVGGEWRA--NGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAK--IWMQVPAPKRGEIVRQIGDALRAK 94 (508)
T ss_pred cccCceECCEEec--CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhH
Confidence 3457899999985 367899999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+++++.|+|||+.+++ .|+..+++.++|+++.++++.+...+.. .+...+..++|+|||++|+|||||+...++
T Consensus 95 ~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 173 (508)
T PLN02315 95 LDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGW 173 (508)
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHH
Confidence 99999999999999999987 5999999999999998887766544432 234456789999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALY----VAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~----l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 290 (393)
++++||++||+||+|||+.+|+++.. +.+++.++|+|+|++|+++| +.+.+..|..|++++.|.||||+++|+.|
T Consensus 174 ~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v 252 (508)
T PLN02315 174 NACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMV 252 (508)
T ss_pred HHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 99999999999999999999999887 67788999999999999998 77789999999999999999999999999
Q ss_pred HHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCC
Q 016216 291 QELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 291 ~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~ 370 (393)
++.++. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||
T Consensus 253 ~~~aa~-~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~ 331 (508)
T PLN02315 253 QQTVNA-RFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGD 331 (508)
T ss_pred HHHHHh-cCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCC
Confidence 999886 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCccccc
Q 016216 371 PFKSGVEQGPQVLF 384 (393)
Q Consensus 371 p~~~~~~~Gpli~~ 384 (393)
|+++++++|||++.
T Consensus 332 p~~~~~~~Gpli~~ 345 (508)
T PLN02315 332 PLEKGTLLGPLHTP 345 (508)
T ss_pred CCCCCCCCCCCcCH
Confidence 99999999999975
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-69 Score=547.45 Aligned_cols=322 Identities=48% Similarity=0.692 Sum_probs=302.7
Q ss_pred ceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 60 ~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~-W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
+||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ . |++++.++|.++|+++++.|+++.++
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFV--SAWAKTTPAERGRILLRLADLIEQHGEE 79 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhH--hhhccCCHHHHHHHHHHHHHHHHHCHHH
Confidence 68999999776678899999999999999999999999999999999997 5 99999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC------CCCceEEEEEecceeEEEECCCCccHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG------DGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~------~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
|++++++|+|||..+++..|+..+++.+++++++..+..+...+. ..+...+..++|+|||++|+|||||+...
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 159 (477)
T cd07113 80 LAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIA 159 (477)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHH
Confidence 999999999999998875599999999999999888766554321 11235678899999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|++. .+..|+.|++||.|.||||+++|+.|.+
T Consensus 160 ~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~ 238 (477)
T cd07113 160 VWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGR 238 (477)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999766 8899999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|+
T Consensus 239 ~aa~-~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 317 (477)
T cd07113 239 QAAS-DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPM 317 (477)
T ss_pred HHHh-hcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++|||+++.
T Consensus 318 ~~~~~~gpli~~~ 330 (477)
T cd07113 318 DESVMFGPLANQP 330 (477)
T ss_pred CCCCCCCCCcCHH
Confidence 9999999999864
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-69 Score=545.95 Aligned_cols=332 Identities=60% Similarity=1.038 Sum_probs=310.5
Q ss_pred cCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHH
Q 016216 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLI 132 (393)
Q Consensus 54 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g-~W~~~~~~~R~~~L~~~a~~l 132 (393)
.+.+.++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+.+ .|+.++.++|.++|+++++.|
T Consensus 3 ~~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l 82 (481)
T cd07141 3 EIKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLI 82 (481)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHH
Confidence 4566789999999987678899999999999999999999999999999999999732 699999999999999999999
Q ss_pred HHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHH
Q 016216 133 EKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 133 ~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
+++.++|++++++|+|||..++...|+..+++.+++++++.++..+...+..++...+..++|+|||++|+|||||+...
T Consensus 83 ~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 162 (481)
T cd07141 83 ERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMA 162 (481)
T ss_pred HHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHH
Confidence 99999999999999999997665569999999999999998888776554334455778999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+.++.|+.|+++|.|+||||+.+|+.|++
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 163 AWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788899999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
.++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 322 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPF 322 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 88754789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++||||++.
T Consensus 323 ~~~~~~gpli~~~ 335 (481)
T cd07141 323 DPKTEQGPQIDEE 335 (481)
T ss_pred CCCCCCcCCCCHH
Confidence 9999999999854
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-69 Score=545.52 Aligned_cols=323 Identities=45% Similarity=0.762 Sum_probs=306.3
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFK--TWGKTSVAERANILNKIADRIEENLEL 79 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876788999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
|++++++|+|||+.+++..|+..+++.+++++++.+...+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 80 LAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999987669999999999999998777665444334556788999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.++++.|+.|++++.|+||||+++|+.|++.+++ +
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~-~ 237 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE-N 237 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence 999999999999999999999999999996 99999999999778899999999999999999999999999999987 8
Q ss_pred CccEEEecCCCCeEEEcCCC-----CHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCC
Q 016216 299 LKPVTLELGGKSPFIIFDDA-----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (393)
Q Consensus 299 ~~pv~lelgG~~~~iV~~dA-----Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~ 373 (393)
+||+++|+|||||+||++|| |+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 238 ~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 317 (480)
T cd07559 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLD 317 (480)
T ss_pred CCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCcccccC
Q 016216 374 SGVEQGPQVLFS 385 (393)
Q Consensus 374 ~~~~~Gpli~~~ 385 (393)
+++++|||+++.
T Consensus 318 ~~~~~gpli~~~ 329 (480)
T cd07559 318 PETMMGAQVSKD 329 (480)
T ss_pred CCCcCCCCcCHH
Confidence 999999999853
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-68 Score=543.44 Aligned_cols=323 Identities=44% Similarity=0.745 Sum_probs=304.5
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFK--TWRKTTVAERANILNKIADIIDENKEL 79 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHH
Confidence 469999999776678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
|++++++|+|||+.+++..|+..+++.++||+..+.+..+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 80 LAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999987569999999999999888776655444333445678999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++|.+.+.+..|+.|+++|.|+||||+++|+.|.+.+++ +
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~ 237 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK-K 237 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-c
Confidence 999999999999999999999999999985 99999999999777889999999999999999999999999999887 8
Q ss_pred CccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCcc
Q 016216 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378 (393)
Q Consensus 299 ~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~ 378 (393)
++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++
T Consensus 238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~ 317 (475)
T cd07117 238 LIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQM 317 (475)
T ss_pred CCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccC
Q 016216 379 GPQVLFS 385 (393)
Q Consensus 379 Gpli~~~ 385 (393)
||++++.
T Consensus 318 gpli~~~ 324 (475)
T cd07117 318 GAQVNKD 324 (475)
T ss_pred cCcCCHH
Confidence 9999753
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-68 Score=542.29 Aligned_cols=327 Identities=53% Similarity=0.895 Sum_probs=305.1
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHcH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP-KMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~-~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
.++||||+|+.+.++.+++++||.||+++++++.++.+|+++++++|++||+. .|+ .++.++|.++|+++++.|+++.
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~-~W~~~~~~~~R~~~L~~~a~~l~~~~ 85 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFET-DWGLKVSGSKRGRCLSKLADLMERNL 85 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhh-hhcccCCHHHHHHHHHHHHHHHHHhH
Confidence 36799999998766788999999999999999999999999999999999971 499 9999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|||||+...++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 86 DYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999866554699999999999999998776654443334456788999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+.++.|..|+.+|.|+||||+.+|+.|++.+++
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999885
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
.+++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|||.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||++++.
T Consensus 326 ~~gpli~~~ 334 (481)
T cd07143 326 FQGPQVSQI 334 (481)
T ss_pred CCCCCcCHH
Confidence 999998853
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-68 Score=541.36 Aligned_cols=322 Identities=40% Similarity=0.662 Sum_probs=301.4
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~-W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+ . |+++|.++|.++|+++++.|+++.+
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~~w~~~~~~~R~~~L~~~a~~l~~~~~ 77 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALK--GPWGKMTVAERADLLYAVADEIERRFD 77 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--hhHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 5799999996 578999999999999999999999999999999999998 8 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC----CCCceEEEEEecceeEEEECCCCccHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG----DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (393)
+|++++++|+|||..++...|+..+++.+++++...++..+...+. ..+...+..++|+|||++|+|||||+...+
T Consensus 78 ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~ 157 (481)
T TIGR03216 78 DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMT 157 (481)
T ss_pred HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHH
Confidence 9999999999999988865699999999999999887765544321 113456788999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCch-hHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 214 ~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|.+. +.++.|..|++||.|+||||+.+|+.|++
T Consensus 158 ~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 158 WKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998654 57889999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.
T Consensus 238 ~aa~-~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~ 316 (481)
T TIGR03216 238 AAAD-GVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316 (481)
T ss_pred HHhc-CCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9987 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++||++++.
T Consensus 317 ~~~~~~gpli~~~ 329 (481)
T TIGR03216 317 DPATNMGPLISAE 329 (481)
T ss_pred CCCCcCCCCCCHH
Confidence 9999999998853
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-68 Score=540.30 Aligned_cols=327 Identities=43% Similarity=0.720 Sum_probs=307.1
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+...++++++++||+||+++++++.++.+|+++++++|++||+.+.|+.+|.++|.++|+++++.|+++.++
T Consensus 21 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 100 (494)
T PRK09847 21 RLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEE 100 (494)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 68999999977678899999999999999999999999999999999999744699999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
|++++++|+|||+.++...|+..+++.++|+++..+++.+...+...+...++.++|+|||++|+|||||+...++++++
T Consensus 101 la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 180 (494)
T PRK09847 101 LALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGP 180 (494)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHHH
Confidence 99999999999998876569999999999999999887766554434445678999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+|||+.+|.++..+.+++.++|+|+|+||+++|.+.+.+..|+.|+++|.|+||||+.+|+.|.+.++..+
T Consensus 181 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~ 260 (494)
T PRK09847 181 ALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSN 260 (494)
T ss_pred HHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhC
Confidence 99999999999999999999999999999999999999999977788999999999999999999999999999988447
Q ss_pred CccEEEecCCCCeEEEcCCC-CHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCc
Q 016216 299 LKPVTLELGGKSPFIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377 (393)
Q Consensus 299 ~~pv~lelgG~~~~iV~~dA-Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~ 377 (393)
++|+++|+||+||+||.+|+ |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++.
T Consensus 261 ~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 340 (494)
T PRK09847 261 MKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATT 340 (494)
T ss_pred CCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 89999999999999999997 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccC
Q 016216 378 QGPQVLFS 385 (393)
Q Consensus 378 ~Gpli~~~ 385 (393)
+|||+++.
T Consensus 341 ~gpli~~~ 348 (494)
T PRK09847 341 MGTLIDCA 348 (494)
T ss_pred CCCCcCHH
Confidence 99998753
|
|
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-68 Score=539.06 Aligned_cols=327 Identities=63% Similarity=1.051 Sum_probs=305.9
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+...|+.++.++|.++|+++++.|.++.+
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 36799999997667789999999999999999999999999999999999992225599999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
+|++++++|+|||..++...|+..+++.+++++++.++..+...+...+...+..++|+|||++|+|||||++..+++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 163 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLA 163 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHH
Confidence 99999999999998766556999999999999999887766654444455678899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 297 (393)
+||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|.+.++++.|..|+++|.|+||||+.+|+.|++.++..
T Consensus 164 ~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~~ 243 (476)
T cd07091 164 PALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKS 243 (476)
T ss_pred HHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997778889999999999999999999999999998865
Q ss_pred CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCc
Q 016216 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377 (393)
Q Consensus 298 ~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~ 377 (393)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||++++++
T Consensus 244 ~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~ 323 (476)
T cd07091 244 NLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTF 323 (476)
T ss_pred CCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccc
Q 016216 378 QGPQVLF 384 (393)
Q Consensus 378 ~Gpli~~ 384 (393)
+||+++.
T Consensus 324 ~gpli~~ 330 (476)
T cd07091 324 QGPQVSK 330 (476)
T ss_pred CCCCcCH
Confidence 9999874
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-68 Score=542.60 Aligned_cols=321 Identities=43% Similarity=0.718 Sum_probs=302.9
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~ 79 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFK--RWAELKAAERKRYLHKIADLIEQHADE 79 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 469999999776678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhH-hcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK-IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
|++++++|+|||..+++ .|+..+++.++++++..++ ..+...+.. ....+..++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 80 IAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 99999999999999998 5999999999999988873 344433332 34567889999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 297 (393)
+||++||+||+|||+.+|.++..+.+++.++|+|+|+||+++|.+.+.++.|..|+.||.|.||||+++|+.|++.+++
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~- 236 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD- 236 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999777788999999999999999999999999999987
Q ss_pred CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCc
Q 016216 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377 (393)
Q Consensus 298 ~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~ 377 (393)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.+++++
T Consensus 237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~ 316 (488)
T TIGR02299 237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETE 316 (488)
T ss_pred cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccc
Q 016216 378 QGPQVLF 384 (393)
Q Consensus 378 ~Gpli~~ 384 (393)
+||++++
T Consensus 317 ~Gpli~~ 323 (488)
T TIGR02299 317 VGPLIHP 323 (488)
T ss_pred CCCCcCH
Confidence 9999975
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-68 Score=539.76 Aligned_cols=322 Identities=47% Similarity=0.751 Sum_probs=304.7
Q ss_pred eeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 016216 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA 140 (393)
Q Consensus 61 ~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~ 140 (393)
||||+|+...++.+++++||+||+++++++.++.+|++++++.|++||+.+.|+.++..+|.++|+++++.|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 68999987656789999999999999999999999999999999999974469999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHh
Q 016216 141 ALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL 220 (393)
Q Consensus 141 ~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~AL 220 (393)
+++++|+|||..+++. |+..+++.+++++.+.++..+...+...+...+..++|+|||++|+|||||+...++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999985 999999999999999887665554433455678899999999999999999999999999999
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCc
Q 016216 221 TCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300 (393)
Q Consensus 221 aaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 300 (393)
++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|.+.+.++.|+.|+++|.|.||||+++|+.|++.+++ +++
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~ 238 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVK 238 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999999999777789999999999999999999999999999987 889
Q ss_pred cEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCc
Q 016216 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP 380 (393)
Q Consensus 301 pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gp 380 (393)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 239 ~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gp 318 (482)
T cd07119 239 KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGP 318 (482)
T ss_pred cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 016216 381 QVLF 384 (393)
Q Consensus 381 li~~ 384 (393)
++++
T Consensus 319 li~~ 322 (482)
T cd07119 319 LVSA 322 (482)
T ss_pred CCCH
Confidence 9985
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-68 Score=542.47 Aligned_cols=325 Identities=29% Similarity=0.390 Sum_probs=302.5
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE- 133 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~- 133 (393)
...++||||+|+.. ++.+++++||.| |+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 30 ~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~--~W~~~~~~~R~~~L~k~a~~l~~ 106 (533)
T TIGR01236 30 IEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKK--DWSALPFYDRAAIFLKAADLLSG 106 (533)
T ss_pred eeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHh
Confidence 44578999999974 567899999997 899999999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccc-cCCCCceEEEEEecc-eeEEEECCCCccHHH
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-PGDGNYHIQTLHEPI-GVAGQIVPWNFPLLL 211 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~i~p~N~P~~~ 211 (393)
+++++|+++++.|+|||+.+++..++..+++.++|++.+++++.+... ....+...++.++|+ |||++|+|||||+..
T Consensus 107 ~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~ 186 (533)
T TIGR01236 107 PYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIA 186 (533)
T ss_pred hcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHH
Confidence 599999999999999999998763499999999999999887765443 222345678899999 999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
..+++++|| +||+||+|||+.+|+++..+.++|.++|+|+|+||+++|.+.++++.|+.|++|+.|+||||+++|+.|+
T Consensus 187 ~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 187 GNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 999999999 7999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHhhcCCc------cEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhc
Q 016216 292 ELAAKSNLK------PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 365 (393)
Q Consensus 292 ~~~a~~~~~------pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~ 365 (393)
+.+++ +++ ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++
T Consensus 266 ~~aa~-~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVAS-NLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAE 344 (533)
T ss_pred HHHHh-hccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhc
Confidence 99987 676 49999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCCCccCcccccC
Q 016216 366 RIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 366 ~~~G~p~~~~~~~Gpli~~~ 385 (393)
+++|||.|+++++||+|++.
T Consensus 345 l~~G~p~d~~t~~Gpli~~~ 364 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDER 364 (533)
T ss_pred CCcCCCCCCCCcccccCCHH
Confidence 99999999999999999753
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-68 Score=538.74 Aligned_cols=322 Identities=34% Similarity=0.528 Sum_probs=303.0
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+ .|+.++.++|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 79 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFP--AWSATPVLKRQQVMFKFRQLLEENLDE 79 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 569999999876678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
|+++++.|+|||..+++ .|+..+++.++|++...+...+...+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~ 158 (478)
T cd07085 80 LARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFP 158 (478)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 99999999999999998 499999999999998777666654432 2244578899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 297 (393)
+||++||+||+|||+.+|+++..+.++|.++|+|+|+||+++| +.+.+..|+.|++++.|+||||+.+|+.|.+.+++
T Consensus 159 ~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~- 236 (478)
T cd07085 159 MAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAA- 236 (478)
T ss_pred HHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999998 45678999999999999999999999999999887
Q ss_pred CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCc
Q 016216 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377 (393)
Q Consensus 298 ~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~ 377 (393)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.+++++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 316 (478)
T cd07085 237 NGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGAD 316 (478)
T ss_pred cCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccC
Q 016216 378 QGPQVLFS 385 (393)
Q Consensus 378 ~Gpli~~~ 385 (393)
+||++++.
T Consensus 317 ~gpli~~~ 324 (478)
T cd07085 317 MGPVISPA 324 (478)
T ss_pred cCCCcCHH
Confidence 99998863
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-68 Score=538.19 Aligned_cols=321 Identities=42% Similarity=0.719 Sum_probs=301.7
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+ .|+.++.++|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKE--AWGKTSVAERANILNKIADRMEANLEM 79 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999876788999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
|+++++.|+|||..++...|+..+++.+++|++..++..+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 80 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 80 LAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999998887569999999999999988776555444334445678999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+|||+.+|.++..+.+++.++ +|+|+||+++|.+.+.+..|+.|++|+.|+||||+++|+.|++.+++ +
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~-~ 237 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE-N 237 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc-C
Confidence 999999999999999999999999999998 99999999999777889999999999999999999999999999987 8
Q ss_pred CccEEEecCCCCeEEEcCC------CCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 299 LKPVTLELGGKSPFIIFDD------ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 299 ~~pv~lelgG~~~~iV~~d------ADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
+||+++|+|||||+||++| ||+|.|++.++++. +|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 238 ~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~ 316 (479)
T cd07116 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPL 316 (479)
T ss_pred CCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8999999999999999988 79999999999864 6999999999999999999999999999999999999999
Q ss_pred CCCCccCccccc
Q 016216 373 KSGVEQGPQVLF 384 (393)
Q Consensus 373 ~~~~~~Gpli~~ 384 (393)
++++.+||++++
T Consensus 317 ~~~~~~Gpli~~ 328 (479)
T cd07116 317 DTETMIGAQASL 328 (479)
T ss_pred CCCCcCCCCCCH
Confidence 999999999986
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-67 Score=537.82 Aligned_cols=325 Identities=51% Similarity=0.867 Sum_probs=304.5
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~-W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
.++||||+|+.+.++.+++++||+||+++++++.++.+|++.++++|++||+ . |+.++.++|.++|+++++.|+++.
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 85 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFE--SWWSKVTGEERGELLDKLADLVEKNR 85 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3679999999765678899999999999999999999999999999999998 6 889999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
++|++++++|+|||..++...|+..+++.+++++++.++..+...+...+...+..++|+|||++|+|||||+...++++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 165 (484)
T cd07144 86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL 165 (484)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence 99999999999999876644699999999999999988876655443334456788999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+.++.|..|+++|.|+||||+.+|+.|.+.+++
T Consensus 166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~ 245 (484)
T cd07144 166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQ 245 (484)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999887
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhc-CccCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPFKSG 375 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~G~p~~~~ 375 (393)
+++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++++ +++|+|++++
T Consensus 246 -~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~ 324 (484)
T cd07144 246 -NLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDD 324 (484)
T ss_pred -cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999985 8999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 325 ~~~gpli~~~ 334 (484)
T cd07144 325 TVVGPQVSKT 334 (484)
T ss_pred CcCCCCcCHH
Confidence 9999998753
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-68 Score=536.93 Aligned_cols=322 Identities=45% Similarity=0.734 Sum_probs=304.4
Q ss_pred eeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 016216 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA 140 (393)
Q Consensus 61 ~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~ 140 (393)
||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 78 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQG--EWASMTPEERGRILRRIAELIRERNEELA 78 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999766678999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHh
Q 016216 141 ALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL 220 (393)
Q Consensus 141 ~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~AL 220 (393)
+++++|+|||..++...|+..+++.++|+++..++..+...+.......+..++|+|||++|+|||||+...++++++||
T Consensus 79 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 158 (467)
T TIGR01804 79 KLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPAL 158 (467)
T ss_pred HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999998546999999999999999888766544433234567889999999999999999999999999999
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCc
Q 016216 221 TCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300 (393)
Q Consensus 221 aaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 300 (393)
++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|.+.+.++.|..|+++|.|.||||+++|+.|.+.+++ ++|
T Consensus 159 aaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~l~ 237 (467)
T TIGR01804 159 AAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAAD-HLK 237 (467)
T ss_pred hcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999999999999999999999999767889999999999999999999999999999887 889
Q ss_pred cEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCc
Q 016216 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP 380 (393)
Q Consensus 301 pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gp 380 (393)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 238 ~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 317 (467)
T TIGR01804 238 HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGP 317 (467)
T ss_pred cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccC
Q 016216 381 QVLFS 385 (393)
Q Consensus 381 li~~~ 385 (393)
++++.
T Consensus 318 li~~~ 322 (467)
T TIGR01804 318 LISAE 322 (467)
T ss_pred cCCHH
Confidence 99854
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-67 Score=536.87 Aligned_cols=321 Identities=41% Similarity=0.669 Sum_probs=302.5
Q ss_pred cceeCCeeeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
++||||+|+.+. ..++++||. ||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 2 ~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ 77 (473)
T cd07097 2 RNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFP--AWRRTSPEARADILDKAGDELEARKE 77 (473)
T ss_pred CceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 579999998753 457999999 5999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|+++++.|+|||+.+++. |+..+++.++||+...++..+...+. ..+...+..++|+|||++|+|||||+...++++
T Consensus 78 ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i 156 (473)
T cd07097 78 ELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI 156 (473)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHH
Confidence 9999999999999999985 99999999999999888776654432 234557889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+++..|+.|++++.|.||||+.+|+.|++.+++
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 236 (473)
T cd07097 157 APALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAA 236 (473)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999777789999999999999999999999999999987
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.|+++
T Consensus 237 -~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 315 (473)
T cd07097 237 -RGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGV 315 (473)
T ss_pred -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++|||+++.
T Consensus 316 ~~Gpli~~~ 324 (473)
T cd07097 316 DIGPVVSER 324 (473)
T ss_pred cCCCCCCHH
Confidence 999999853
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-67 Score=536.02 Aligned_cols=321 Identities=34% Similarity=0.489 Sum_probs=299.5
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
.+||||+|+.+ ++++++++||.||+++++++.++.+|+++++++|++||+ .|++++.++|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 78 (487)
T PRK09457 2 TLWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFP--AWARLSFEERQAIVERFAALLEENKEE 78 (487)
T ss_pred CceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHhHHHH
Confidence 36999999875 467899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
|+++++.|+|||+.+++. |+..+++.+++++.+..+..+...+...+...++.++|+|||++|+|||||+...++++++
T Consensus 79 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 79 LAEVIARETGKPLWEAAT-EVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 999999999999999984 9999999999999887666554433223445688899999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.|++|+.|+||||+++|+.|++.+++..
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999998 5678999999999999999999999999999887645
Q ss_pred CccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccH-HHHHHHHHHHHhcCccCCCC-CCCC
Q 016216 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEKAKARAMRRIVGDPF-KSGV 376 (393)
Q Consensus 299 ~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~G~p~-~~~~ 376 (393)
.+++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|||+ ++.+
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 678999999999999999999999999999999999999999999999999998 99999999999999999997 7889
Q ss_pred ccCccccc
Q 016216 377 EQGPQVLF 384 (393)
Q Consensus 377 ~~Gpli~~ 384 (393)
++|||++.
T Consensus 317 ~~Gpli~~ 324 (487)
T PRK09457 317 FMGAVISE 324 (487)
T ss_pred ccCCCcCH
Confidence 99999986
|
|
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-67 Score=540.15 Aligned_cols=323 Identities=38% Similarity=0.566 Sum_probs=306.0
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
.++||||+|+. ++.+++++||.| |+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 33 ~~~~i~g~~~~--~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (512)
T cd07124 33 YPLVIGGKEVR--TEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFP--TWRRTPPEERARLLLRAAALLRRRR 108 (512)
T ss_pred cceeECCEEec--CCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 37899999996 457899999998 999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
++|++++++|+|||+.+++. |+..+++.++|++..+++..+...+...+...+..++|+|||++|+|||||+...++++
T Consensus 109 ~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 187 (512)
T cd07124 109 FELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMT 187 (512)
T ss_pred HHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence 99999999999999999985 99999999999999998886655443345567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.+.+..|..|+++|.|+||||+.+|+.|.+.+++
T Consensus 188 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 267 (512)
T cd07124 188 TAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAK 267 (512)
T ss_pred HHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999886
Q ss_pred c-----CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 297 S-----NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 297 ~-----~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||
T Consensus 268 ~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 347 (512)
T cd07124 268 VQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDP 347 (512)
T ss_pred ccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 3 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
.|+++++||++++.
T Consensus 348 ~d~~~~~Gpli~~~ 361 (512)
T cd07124 348 EDPEVYMGPVIDKG 361 (512)
T ss_pred CCCCCcccCCcCHH
Confidence 99999999999864
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-67 Score=540.12 Aligned_cols=322 Identities=29% Similarity=0.390 Sum_probs=300.7
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH-c
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK-N 135 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~-~ 135 (393)
.++||||+|+. ++++++++||+| |+++++++.++.+|+++++++|++||+ .|++++..+|.++|+++++.|++ +
T Consensus 33 ~~~~i~G~~~~--~~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (522)
T cd07123 33 IPLVIGGKEVR--TGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARK--EWARMPFEDRAAIFLKAADLLSGKY 108 (522)
T ss_pred cCeeECCEEcC--CCCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhhC
Confidence 47899999986 367899999995 999999999999999999999999999 99999999999999999999996 8
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecc-eeEEEECCCCccHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPI-GVAGQIVPWNFPLLLFT 213 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~N~P~~~~~ 213 (393)
+++|++++++|+|||+.++...|+...++.++|++.+++++.+...+. ..+...++.++|+ |||++|+|||||+....
T Consensus 109 ~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~ 188 (522)
T cd07123 109 RYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGN 188 (522)
T ss_pred HHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHH
Confidence 999999999999999988865688999999999999888776544332 2245578899998 99999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 214 ~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
+++++|| +||+||+|||+.+|+++..+.++|.++|+|+|+||+++|.+.+++..|+.|++|+.|+||||+++|+.|++.
T Consensus 189 ~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~ 267 (522)
T cd07123 189 LAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQ 267 (522)
T ss_pred HHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 699999999999999999999999999999999999999777789999999999999999999999999999
Q ss_pred HhhcCCc------cEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCc
Q 016216 294 AAKSNLK------PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI 367 (393)
Q Consensus 294 ~a~~~~~------pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~ 367 (393)
+++ +++ ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++++
T Consensus 268 aa~-~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 346 (522)
T cd07123 268 IGE-NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIK 346 (522)
T ss_pred HHh-hcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCc
Confidence 987 666 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCcccccC
Q 016216 368 VGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 368 ~G~p~~~~~~~Gpli~~~ 385 (393)
+|||+|+++++||||++.
T Consensus 347 ~G~p~d~~t~~Gpli~~~ 364 (522)
T cd07123 347 MGDPDDFSNFMGAVIDEK 364 (522)
T ss_pred cCCCCCCCCCCCCCCCHH
Confidence 999999999999999864
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-67 Score=535.35 Aligned_cols=323 Identities=45% Similarity=0.727 Sum_probs=303.6
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.. ++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 79 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFP--EWSQTTPKERAEALLKLADAIEENAD 79 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 367999999865 678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|++++++|+|||..++...|+..+++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||+...++++
T Consensus 80 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i 159 (475)
T PRK13473 80 EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKL 159 (475)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHH
Confidence 9999999999999988865699999999999998888776543321 123346788999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++|.+.+.+..|+.|+++|.|+||||+++|+.|.+.+++
T Consensus 160 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~ 238 (475)
T PRK13473 160 APALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238 (475)
T ss_pred HHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999 99999999999778899999999999999999999999999999987
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
+++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 239 -~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 317 (475)
T PRK13473 239 -SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDT 317 (475)
T ss_pred -cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++|||+++.
T Consensus 318 ~~gpli~~~ 326 (475)
T PRK13473 318 ELGPLISAA 326 (475)
T ss_pred CCCCCCCHH
Confidence 999999853
|
|
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-67 Score=534.69 Aligned_cols=319 Identities=42% Similarity=0.598 Sum_probs=301.6
Q ss_pred ceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 016216 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL 139 (393)
Q Consensus 60 ~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l 139 (393)
+||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|+++++.|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l 78 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFP--AWSATSVEERAALLERIAEAYEARADEL 78 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 48999999876678899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHH
Q 016216 140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA 219 (393)
Q Consensus 140 ~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~A 219 (393)
++++++|+|||..++...|+..+++.++++++..+++.+... ....+..++|+|||++|+|||||+...++++++|
T Consensus 79 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 154 (466)
T cd07138 79 AQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154 (466)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999887656899999999999988876654322 2245778999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCC
Q 016216 220 LTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299 (393)
Q Consensus 220 LaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 299 (393)
|++||+||+|||+.+|+++..+.++|.++|+|+|+||+++|.+.+.++.|..|++++.|.||||+.+|+.|.+.++. ++
T Consensus 155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~ 233 (466)
T cd07138 155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD-TV 233 (466)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cC
Confidence 99999999999999999999999999999999999999999777889999999999999999999999999999987 78
Q ss_pred ccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccC
Q 016216 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQG 379 (393)
Q Consensus 300 ~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~G 379 (393)
+|+++|+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|||+++++++|
T Consensus 234 ~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 313 (466)
T cd07138 234 KRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLG 313 (466)
T ss_pred CeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC
Q 016216 380 PQVLFS 385 (393)
Q Consensus 380 pli~~~ 385 (393)
|++++.
T Consensus 314 pli~~~ 319 (466)
T cd07138 314 PLASAA 319 (466)
T ss_pred ccCCHH
Confidence 998864
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-67 Score=534.38 Aligned_cols=320 Identities=38% Similarity=0.635 Sum_probs=301.7
Q ss_pred ceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 016216 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL 139 (393)
Q Consensus 60 ~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l 139 (393)
+||||+|+.+. +.+++++||+||+++++++.++.+|++.++++|++||+ .|+.++.++|.++|+++++.|+++.++|
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFK--EWRKVPAPRRGEIVRQIGEALRKKKEAL 77 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 58999999764 68899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 140 ~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
++++++|+|||+.+++. |+..+++.++|++...+++.+...+.. .+...+..++|+|||++|+|||||+...++++++
T Consensus 78 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 78 GRLVSLEMGKILPEGLG-EVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred HHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 99999999999999884 999999999999999888766544422 2335678899999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
||++||+||+|||+.+|.++..+.++++++ |+|+|+|++++|++. .++.|..|+++|.|.||||+++|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~a 235 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETV 235 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999998655 889999999999999999999999999999
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
++ +++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||.++
T Consensus 236 a~-~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 314 (478)
T cd07086 236 AR-RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDE 314 (478)
T ss_pred hc-cCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 87 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||++++.
T Consensus 315 ~~~~gpli~~~ 325 (478)
T cd07086 315 GTLVGPLINQA 325 (478)
T ss_pred CCCCCCCCCHH
Confidence 99999999863
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-67 Score=530.44 Aligned_cols=324 Identities=43% Similarity=0.660 Sum_probs=302.4
Q ss_pred ceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 016216 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL 139 (393)
Q Consensus 60 ~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l 139 (393)
+||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.+.|+.+|.++|.++|+++++.|+++.++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 48999999765668899999999999999999999999999999999998445999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcc-ccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT-VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 140 ~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
++++++|+|||..++...|+..+++.++++++..++..+.. .+...+...+..++|+|||++|+|||||+...++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 99999999999977765699999999999999887765432 22223455688999999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.|++++.|+||||+.+|+.|++.+++ +
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~-~ 238 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGE-R 238 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-c
Confidence 999999999999999999999999999999999999999998 56688999999999999999999999999999887 8
Q ss_pred CccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCcc
Q 016216 299 LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378 (393)
Q Consensus 299 ~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~ 378 (393)
++|+++|+||+||+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++
T Consensus 239 ~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (471)
T cd07139 239 LARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQI 318 (471)
T ss_pred CCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccC
Q 016216 379 GPQVLFS 385 (393)
Q Consensus 379 Gpli~~~ 385 (393)
||++++.
T Consensus 319 gpli~~~ 325 (471)
T cd07139 319 GPLASAR 325 (471)
T ss_pred CCCCCHH
Confidence 9999864
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-67 Score=530.05 Aligned_cols=318 Identities=32% Similarity=0.560 Sum_probs=296.4
Q ss_pred eeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 016216 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA 140 (393)
Q Consensus 61 ~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~ 140 (393)
+|||+|+.+ +++++++||.||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|+++++.|+++.++|+
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 77 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EWRDVPAPKRGEIVRQIGDALRKKKEALG 77 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999974 57899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHH
Q 016216 141 ALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA 219 (393)
Q Consensus 141 ~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~A 219 (393)
+++++|+|||+.++. .|+..+++.++|+++..+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++|
T Consensus 78 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 156 (474)
T cd07130 78 KLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIA 156 (474)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHH
Confidence 999999999999987 5999999999999988776665544322 23446788999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 220 LTCGNTIVLKSAEQTPLTALYVAKL----FHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 220 LaaGN~VIlKps~~~p~~~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
|++||+||+|||+.+|+++..+.++ |.++|+|+|++|+++|+ .+.++.|+.|++||.|.||||+++|+.|++.++
T Consensus 157 LaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 157 LVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 9999999999999999999887776 46899999999999984 457899999999999999999999999999988
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||++++
T Consensus 236 ~-~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 A-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred h-cCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||+|+..
T Consensus 315 ~~~Gpli~~~ 324 (474)
T cd07130 315 TLVGPLHTKA 324 (474)
T ss_pred CCCCCCcCHH
Confidence 9999999863
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-67 Score=531.12 Aligned_cols=320 Identities=45% Similarity=0.720 Sum_probs=303.8
Q ss_pred eeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 016216 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELA 140 (393)
Q Consensus 61 ~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~ 140 (393)
||||+|+...++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 78 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQK--AWERLPAIERAAYLRKLADLIRENADELA 78 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999766688999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHH
Q 016216 141 ALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA 219 (393)
Q Consensus 141 ~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~A 219 (393)
+++++|+|||..+++. |+..+++.+++++.++.+..+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus 79 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 157 (468)
T cd07088 79 KLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPA 157 (468)
T ss_pred HHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHH
Confidence 9999999999999884 999999999999999887766554432 24567788999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCC
Q 016216 220 LTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299 (393)
Q Consensus 220 LaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 299 (393)
|++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++.+.++.|+.|+++|.|.||||+++|+.|++.+++ ++
T Consensus 158 L~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~ 236 (468)
T cd07088 158 LVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NI 236 (468)
T ss_pred HHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cC
Confidence 99999999999999999999999999999999999999999777788999999999999999999999999999887 88
Q ss_pred ccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccC
Q 016216 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQG 379 (393)
Q Consensus 300 ~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~G 379 (393)
+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|
T Consensus 237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (468)
T cd07088 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG 316 (468)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 016216 380 PQVLF 384 (393)
Q Consensus 380 pli~~ 384 (393)
|+++.
T Consensus 317 pli~~ 321 (468)
T cd07088 317 PLVNE 321 (468)
T ss_pred cccCH
Confidence 99975
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-67 Score=533.81 Aligned_cols=325 Identities=33% Similarity=0.487 Sum_probs=304.0
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
...++||||+|+.+ +.+++++||. ||+++++++.++.+|++.+++.|++||+ .|+.++.++|.++|+++++.|++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 106 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFE--AWKKTPVRERAGILRKAAAIMER 106 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 34478999999964 4679999999 5999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc-CCCCceEEEEEecceeEEEECCCCccHHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (393)
+.++|++++++|+|||+.++.. |+..+++.++|+++..++..+...+ ...+...++.++|+|||++|+|||||+...+
T Consensus 107 ~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~ 185 (511)
T TIGR01237 107 RRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAV 185 (511)
T ss_pred CHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHH
Confidence 9999999999999999999875 9999999999999998877654432 2234567888999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 214 ~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
+++++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.+.+..|+.|++++.|.||||+.+|+.|++.
T Consensus 186 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 186 GMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999998
Q ss_pred Hhh-----cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc
Q 016216 294 AAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (393)
Q Consensus 294 ~a~-----~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~ 368 (393)
++. .+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 873 378999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCcccccC
Q 016216 369 GDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 369 G~p~~~~~~~Gpli~~~ 385 (393)
|+|.++++++||+++..
T Consensus 346 g~~~~~~~~~gpli~~~ 362 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQK 362 (511)
T ss_pred CCCCCCCCcCCCCCCHH
Confidence 99999999999999854
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-66 Score=532.16 Aligned_cols=324 Identities=32% Similarity=0.522 Sum_probs=303.7
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
...++||+|+|+. ++.+++++||. ||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|+++++.|++
T Consensus 17 ~~~~~~i~g~~~~--~~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 92 (500)
T cd07083 17 RAYPLVIGGEWVD--TKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFK--TWKDWPQEDRARLLLKAADLLRR 92 (500)
T ss_pred ccccceECCEEec--CCCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 3457899999986 35789999998 6999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccc--cCCCCceEEEEEecceeEEEECCCCccHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV--PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
+.++|+++++.|+|||+.++. .|+..+++.+++|++.+.+..+... +...+...++.++|+|||++|+|||||+...
T Consensus 93 ~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~ 171 (500)
T cd07083 93 RRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIF 171 (500)
T ss_pred CHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHH
Confidence 999999999999999999876 5999999999999999887765432 2223456778899999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+||+++|.+.+.++.|+.|+++|.|+||||+.+|+.|.+
T Consensus 172 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~ 251 (500)
T cd07083 172 TGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYE 251 (500)
T ss_pred HHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977788999999999999999999999999999
Q ss_pred HHhhcCC------ccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcC
Q 016216 293 LAAKSNL------KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366 (393)
Q Consensus 293 ~~a~~~~------~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~ 366 (393)
.+++ ++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++
T Consensus 252 ~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~ 330 (500)
T cd07083 252 AAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERL 330 (500)
T ss_pred HHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcC
Confidence 9887 54 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccCcccccC
Q 016216 367 IVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 367 ~~G~p~~~~~~~Gpli~~~ 385 (393)
++|||.++++++||++++.
T Consensus 331 ~~G~p~~~~~~~Gpli~~~ 349 (500)
T cd07083 331 SVGPPEENGTDLGPVIDAE 349 (500)
T ss_pred CCCCCCCCCCCCCCCCCHH
Confidence 9999999999999999864
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-67 Score=531.21 Aligned_cols=318 Identities=28% Similarity=0.316 Sum_probs=287.8
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
++||||+|+.. ++++++++||.||+++++++.++ +|+++|+++|++| |+ .|+.++.++|.++|+++++.|+++++
T Consensus 2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~~Ra~~L~~~a~~l~~~~~ 77 (513)
T cd07128 2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGP--ALRALTFHERAAMLKALAKYLMERKE 77 (513)
T ss_pred ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhc--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 67999999975 46889999999999999999865 8999999999997 78 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcC--------ccccCCC-C-ceEEEEEec-ceeEEEECCCC
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG--------LTVPGDG-N-YHIQTLHEP-IGVAGQIVPWN 206 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~--------~~~~~~~-~-~~~~~~~~P-~Gvv~~i~p~N 206 (393)
+|+++ +.|+|||+.+++. |+..+++.++||++++++..+ +..+... + ...++.++| +|||++|+|||
T Consensus 78 ~la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN 155 (513)
T cd07128 78 DLYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFN 155 (513)
T ss_pred HHHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcc
Confidence 99996 8999999999884 999999999999999877642 2222211 1 235677999 59999999999
Q ss_pred ccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChH
Q 016216 207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285 (393)
Q Consensus 207 ~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~ 285 (393)
||++..++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.++++.+ +.+|.|.||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 156 FPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 99999999998644444332 5789999999999
Q ss_pred HHHHHHHHHh-hcCCccEEEecCCCCeEEEcCCCC-----HHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHH
Q 016216 286 TGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDAD-----VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359 (393)
Q Consensus 286 ~g~~i~~~~a-~~~~~pv~lelgG~~~~iV~~dAD-----ld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L 359 (393)
+|+.|++.++ ..+++|+++|+|||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 9999999853 237899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhcCccCCCCCCCCccCcccccC
Q 016216 360 KARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 360 ~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+++++++++|||+|+++++|||+++.
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~ 338 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSRE 338 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHH
Confidence 99999999999999999999999864
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-66 Score=532.23 Aligned_cols=323 Identities=34% Similarity=0.519 Sum_probs=301.8
Q ss_pred cccceeCCeeeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++||||+|+.+ +++++++||+ ||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 36 ~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 111 (514)
T PRK03137 36 DYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFE--TWKKWSPEDRARILLRAAAIIRRR 111 (514)
T ss_pred ccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHC
Confidence 4478999999964 5789999999 6999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCc-cccCCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL-TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|++++++|+|||+.+++. |+..+++.++||+..+++.... ......+...++.++|+|||++|+|||||+...++
T Consensus 112 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 112 KHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 999999999999999999985 9999999999999988776422 22222345678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|++.+.++.|+.|++++.|.||||+.+|+.|++.+
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 270 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999998
Q ss_pred hhc-----CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccC
Q 016216 295 AKS-----NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369 (393)
Q Consensus 295 a~~-----~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G 369 (393)
++. ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 271 a~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g 350 (514)
T PRK03137 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVG 350 (514)
T ss_pred hcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCC
Confidence 752 679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCcccccC
Q 016216 370 DPFKSGVEQGPQVLFS 385 (393)
Q Consensus 370 ~p~~~~~~~Gpli~~~ 385 (393)
||.+++ ++||++++.
T Consensus 351 ~p~~~~-~~Gpli~~~ 365 (514)
T PRK03137 351 NPEDNA-YMGPVINQA 365 (514)
T ss_pred CCCCcc-CcCCCCCHH
Confidence 999998 999999854
|
|
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-66 Score=528.90 Aligned_cols=321 Identities=45% Similarity=0.731 Sum_probs=303.0
Q ss_pred ceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 60 NLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 60 ~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
+||||+|+.+.++++++++||.| ++++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~e 78 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFP--EWRKVPAPRRAEYLFRAAELLKKRKEE 78 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999766678999999999 689999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
|++++++|+|||..+++. |+..+++.+++++...++..+...+.. .+...+.+++|+|||++|+|||||+...+++++
T Consensus 79 la~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 157 (478)
T cd07131 79 LARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIF 157 (478)
T ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHH
Confidence 999999999999999885 999999999999998887665544322 233568899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 297 (393)
+||++||+||+|||+.+|+++..+.++|.++|+|+|+||+++|.+.+.+..|+.|+++|.|+||||+.+|+.|++.+++
T Consensus 158 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~- 236 (478)
T cd07131 158 PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR- 236 (478)
T ss_pred HHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999777789999999999999999999999999999987
Q ss_pred CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCc
Q 016216 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377 (393)
Q Consensus 298 ~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~ 377 (393)
+++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 316 (478)
T cd07131 237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316 (478)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccc
Q 016216 378 QGPQVLF 384 (393)
Q Consensus 378 ~Gpli~~ 384 (393)
+||++++
T Consensus 317 ~gpli~~ 323 (478)
T cd07131 317 MGPLINE 323 (478)
T ss_pred CCcCCCH
Confidence 9999986
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-66 Score=527.88 Aligned_cols=321 Identities=33% Similarity=0.477 Sum_probs=297.1
Q ss_pred ceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 016216 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL 139 (393)
Q Consensus 60 ~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l 139 (393)
+||||+|+.. ++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 77 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFP--AWARLSLEERIAVVQRFAALLEERKEAL 77 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4899999865 578999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHH
Q 016216 140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA 219 (393)
Q Consensus 140 ~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~A 219 (393)
++++++|+|||..++. .|+..+++.+++++....+..+...+...+...++.++|+|||++|+|||||+...++++++|
T Consensus 78 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~A 156 (484)
T TIGR03240 78 ARVIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPA 156 (484)
T ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999988 499999999999888776665543322223346788999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCC
Q 016216 220 LTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299 (393)
Q Consensus 220 LaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 299 (393)
|++||+||+|||+.+|+++..+.++++++|+|+|+||+++| +.+.++.|+.|+++|.|+||||+++|+.|++.+++..+
T Consensus 157 LaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 157 LLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred HHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999999999999999999998 56788999999999999999999999999998876356
Q ss_pred ccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccH-HHHHHHHHHHHhcCccCCC-CCCCCc
Q 016216 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFVEKAKARAMRRIVGDP-FKSGVE 377 (393)
Q Consensus 300 ~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~G~p-~~~~~~ 377 (393)
+++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++ |+|+++|++.++++++||| .+++++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~ 315 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF 315 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 88999999999999999999999999999999999999999999999999984 9999999999999999997 578889
Q ss_pred cCcccccC
Q 016216 378 QGPQVLFS 385 (393)
Q Consensus 378 ~Gpli~~~ 385 (393)
+||+++..
T Consensus 316 ~gpli~~~ 323 (484)
T TIGR03240 316 MGAVISLQ 323 (484)
T ss_pred ccccCCHH
Confidence 99998853
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-66 Score=525.75 Aligned_cols=318 Identities=40% Similarity=0.637 Sum_probs=299.2
Q ss_pred CeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHH
Q 016216 64 GQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE 143 (393)
Q Consensus 64 G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~ 143 (393)
|+|+.+.++.+++++||+||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.++|++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 78 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQK--EWAATLPQERAEILEKAAQILEERRDEIVEWL 78 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 6787765677899999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhc
Q 016216 144 TWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTC 222 (393)
Q Consensus 144 ~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaa 222 (393)
++|+|||+.++.. |+..+++.++|++.+.++..+...+.. .+...++.++|+|||++|+|||||++..++++++||++
T Consensus 79 ~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 157 (465)
T cd07151 79 IRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALAL 157 (465)
T ss_pred HHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHc
Confidence 9999999999885 999999999999988877765544432 34456788999999999999999999999999999999
Q ss_pred CCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCcc
Q 016216 223 GNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKP 301 (393)
Q Consensus 223 GN~VIlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~p 301 (393)
||+||+|||+.+|.++ ..+.+++.++|+|+|+||+++|++.+.+..|+.|+.++.|.||||+.+|+.|++.+++ ++||
T Consensus 158 GN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~ 236 (465)
T cd07151 158 GNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLKK 236 (465)
T ss_pred CCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCc
Confidence 9999999999999996 7899999999999999999999777889999999999999999999999999999987 8999
Q ss_pred EEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcc
Q 016216 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQ 381 (393)
Q Consensus 302 v~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpl 381 (393)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++.+||+
T Consensus 237 ~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 316 (465)
T cd07151 237 VALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPL 316 (465)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 016216 382 VLFS 385 (393)
Q Consensus 382 i~~~ 385 (393)
+++.
T Consensus 317 i~~~ 320 (465)
T cd07151 317 INES 320 (465)
T ss_pred cCHH
Confidence 9854
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-66 Score=524.68 Aligned_cols=309 Identities=28% Similarity=0.415 Sum_probs=288.8
Q ss_pred CCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh
Q 016216 72 GKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY 151 (393)
Q Consensus 72 ~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 151 (393)
.++++++||.||++|++++.++.+|+++++++|++||+ .|++++.++|.++|+++++.|+++.++|+++++.|+|||.
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 83 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFR--DWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI 83 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH
Confidence 46789999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecC
Q 016216 152 VQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231 (393)
Q Consensus 152 ~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps 231 (393)
.+++ .|+..+++.++||+...++..+.......+...++.++|+|||++|+|||||++..++++++||++||+||+|||
T Consensus 84 ~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs 162 (462)
T PRK13968 84 NQAR-AEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA 162 (462)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 9988 499999999999998877664432222234456888999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCe
Q 016216 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311 (393)
Q Consensus 232 ~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~ 311 (393)
+.+|+++..+.+++.++|+|+|++|+++|.+.+ +..|+.|+++|.|+||||+++|+.|++.+++ ++||+++|+|||||
T Consensus 163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~-~l~~~~lElGGk~p 240 (462)
T PRK13968 163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDP 240 (462)
T ss_pred CcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEecCCCCc
Confidence 999999999999999999999999999986554 4558899999999999999999999999987 89999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 312 ~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|+++++++++|||.++++++||++++.
T Consensus 241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~ 314 (462)
T PRK13968 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFD 314 (462)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999743
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-66 Score=525.92 Aligned_cols=320 Identities=33% Similarity=0.516 Sum_probs=301.2
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+.++++++++||.||++|++++.++.+|++++++.|++||+ .|++++.++|.++|+++++.|+++.++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 79 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFL--TWGQTSLAQRTSVLLRYQALLKEHRDE 79 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999766678999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
|+++++.|+|||+.+++ .|+..+++.++|++...+.+.+...+.. .+...+..++|+|||++|+|||||+...+++++
T Consensus 80 l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 158 (477)
T TIGR01722 80 IAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP 158 (477)
T ss_pred HHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence 99999999999999988 4999999999999988877766554322 344567889999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 297 (393)
+||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++| +.+.+..|+.|++|+.|+||||+++|+.|.+.++.
T Consensus 159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~- 236 (477)
T TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSA- 236 (477)
T ss_pred HHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999998 45668899999999999999999999999999887
Q ss_pred CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCc
Q 016216 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVE 377 (393)
Q Consensus 298 ~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~ 377 (393)
++||+++|+||+||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ |+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~ 315 (477)
T TIGR01722 237 HGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAE 315 (477)
T ss_pred cCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCC
Confidence 889999999999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred cCccccc
Q 016216 378 QGPQVLF 384 (393)
Q Consensus 378 ~Gpli~~ 384 (393)
+||+++.
T Consensus 316 ~Gp~i~~ 322 (477)
T TIGR01722 316 MGPLITP 322 (477)
T ss_pred cCCCcCH
Confidence 9999884
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-66 Score=524.82 Aligned_cols=315 Identities=47% Similarity=0.792 Sum_probs=297.4
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|+++|+ .|+.++.++|.++|+++++.|+++.
T Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (480)
T cd07111 21 SFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFE--SWSALPGHVRARHLYRIARHIQKHQ 98 (480)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 34789999999765678899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
++|++++++|+|||+.+++..|+..+++.+++++.+.+...+ .+..++|+|||++|+|||||+...++++
T Consensus 99 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i 168 (480)
T cd07111 99 RLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT----------ELAGWKPVGVVGQIVPWNFPLLMLAWKI 168 (480)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcccceecceEEEECCCccHHHHHHHHH
Confidence 999999999999999998756899999999999888765432 1345799999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++ +.+..|+.|+++|.|+||||+.+|+.|.+.+++
T Consensus 169 ~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 169 CPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999854 678999999999999999999999999999887
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||+++++
T Consensus 248 -~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~ 326 (480)
T cd07111 248 -TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAI 326 (480)
T ss_pred -cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||++++.
T Consensus 327 ~~gpli~~~ 335 (480)
T cd07111 327 DMGAIVDPA 335 (480)
T ss_pred ccccccCHH
Confidence 999998754
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-66 Score=526.81 Aligned_cols=312 Identities=30% Similarity=0.467 Sum_probs=296.0
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCC-ceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTA-EVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg-~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++||||+|+. ++++++++||.|+ ++|++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 37 ~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~ 112 (500)
T TIGR01238 37 QAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFP--TWNATPAKERAAKLDRLADLLELH 112 (500)
T ss_pred ecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhH
Confidence 348999999986 5788999999995 89999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
.++|++++++|+|||+.++.. |+..+++.++++++..++..+. ..++|+|||++|+|||||+...+++
T Consensus 113 ~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~~~~~~~~-----------~~~~P~GVV~~I~pwN~P~~~~~~~ 180 (500)
T TIGR01238 113 MPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVRDVLGE-----------FSVESRGVFVCISPWNFPLAIFTGQ 180 (500)
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCc-----------eeccCcceEEEECCCchHHHHHHHH
Confidence 999999999999999999875 9999999999999987654321 3589999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.+.++.|+.|++++.|+||||+.+|+.|++.++
T Consensus 181 i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa 260 (500)
T TIGR01238 181 ISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLA 260 (500)
T ss_pred HHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999877678999999999999999999999999999998
Q ss_pred hcCC---ccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 296 KSNL---KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 296 ~~~~---~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
+ ++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 261 ~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~ 339 (500)
T TIGR01238 261 Q-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH 339 (500)
T ss_pred h-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCC
Confidence 7 54 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
++++++||++++.
T Consensus 340 ~~~~~~Gpli~~~ 352 (500)
T TIGR01238 340 LLTTDVGPVIDAE 352 (500)
T ss_pred CCCCCcCCCCCHH
Confidence 9999999999864
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-66 Score=519.75 Aligned_cols=306 Identities=34% Similarity=0.505 Sum_probs=287.8
Q ss_pred eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 016216 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154 (393)
Q Consensus 75 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 154 (393)
++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||+.++
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 80 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFR--DYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASA 80 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHH
Confidence 78899999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hhcchHHHHHHHHHHHHhhhHhcCccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecC
Q 016216 155 LKSEVPMVVRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231 (393)
Q Consensus 155 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps 231 (393)
.. |+..+++.++|++..+++..+..... ..+...++.++|+|||++|+|||||++..++++++||++||+||+|||
T Consensus 81 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 81 KA-EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 74 99999999999999987775443221 123456888999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCe
Q 016216 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP 311 (393)
Q Consensus 232 ~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~ 311 (393)
+.+|+++..+.+++.++|+|+|+||++++ +.+.+..|+.|++++.|+||||+++|+.|++.+++ ++||+++|+|||||
T Consensus 160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~-~~~~~~lElGG~~~ 237 (457)
T PRK09406 160 SNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD-EIKKTVLELGGSDP 237 (457)
T ss_pred CcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh-cCCceeeecCCCCe
Confidence 99999999999999999999999999986 34567889999999999999999999999999887 89999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 312 FIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 312 ~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|+|+++++||++++.
T Consensus 238 ~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~ 311 (457)
T PRK09406 238 FIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQ 311 (457)
T ss_pred eEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864
|
|
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-65 Score=524.38 Aligned_cols=319 Identities=28% Similarity=0.359 Sum_probs=289.6
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAF-DEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~-~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
++||||+|+.. ++++++++||.||+++++++. +.+|+++|+++|++|| + .|+.+|..+|.++|+++++.|+++.+
T Consensus 6 ~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (521)
T PRK11903 6 ANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGA--ALRALTYAQRAALLAAIVKVLQANRD 81 (521)
T ss_pred hhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhh--hhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 67999999964 457899999999999999997 8899999999999995 8 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC---------CCceEEEEEec-ceeEEEECCCCc
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD---------GNYHIQTLHEP-IGVAGQIVPWNF 207 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---------~~~~~~~~~~P-~Gvv~~i~p~N~ 207 (393)
+|++++++|+|||+.+++. |+..+++.++||+.+++.+.+...... .....+..++| +|||++|+||||
T Consensus 82 ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~ 160 (521)
T PRK11903 82 AYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNF 160 (521)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcch
Confidence 9999999999999999985 999999999999998877654322111 12234567899 599999999999
Q ss_pred cHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHH
Q 016216 208 PLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDT 286 (393)
Q Consensus 208 P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~ 286 (393)
|+...++++++||++||+||+|||+.+|.++..+.+++.++| +|+|++|+++|.+.++++.| ++++.|+||||+++
T Consensus 161 P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~ 237 (521)
T PRK11903 161 PAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAET 237 (521)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHH
Confidence 999999999999999999999999999999999999999999 99999999998665554444 78999999999999
Q ss_pred HHHHHHHHh-hcCCccEEEecCCCCeEEEcCCCC-----HHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHH
Q 016216 287 GKIVQELAA-KSNLKPVTLELGGKSPFIIFDDAD-----VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAK 360 (393)
Q Consensus 287 g~~i~~~~a-~~~~~pv~lelgG~~~~iV~~dAD-----ld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~ 360 (393)
|+.|++.++ ..+++|+++|+|||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|+
T Consensus 238 G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~ 317 (521)
T PRK11903 238 AAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALA 317 (521)
T ss_pred HHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHH
Confidence 999998753 237899999999999999999999 59999999999999999999999999999999999999999
Q ss_pred HHHhcCccCCCCCCCCccCcccccC
Q 016216 361 ARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 361 ~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++++++++|||+++++++||||++.
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~ 342 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRA 342 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHH
Confidence 9999999999999999999999864
|
|
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-65 Score=524.66 Aligned_cols=322 Identities=36% Similarity=0.534 Sum_probs=302.1
Q ss_pred cceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
-.||+|+|+. ++++++++||.| |+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 34 ~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 109 (518)
T cd07125 34 IPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFA--GWSATPVEERAEILEKAADLLEANRG 109 (518)
T ss_pred CceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4589999983 578999999999 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcc-ccCCCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT-VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|++++++|+|||+.+++. |+..+++.++++++.+++..+.. .+...+...+..++|+|||++|+|||||+...++++
T Consensus 110 ~la~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i 188 (518)
T cd07125 110 ELIALAAAEAGKTLADADA-EVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQI 188 (518)
T ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHH
Confidence 9999999999999999874 99999999999999888765442 333335567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|++.+.+..|..|+++|.|+||||+++|+.|++.+++
T Consensus 189 ~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~ 268 (518)
T cd07125 189 AAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAE 268 (518)
T ss_pred HHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999766788999999999999999999999999998875
Q ss_pred c--CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 297 S--NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 297 ~--~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
+ .++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||.++
T Consensus 269 ~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 348 (518)
T cd07125 269 RDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDL 348 (518)
T ss_pred ccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCC
Confidence 2 37999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||++++.
T Consensus 349 ~~~~gpli~~~ 359 (518)
T cd07125 349 STDVGPLIDKP 359 (518)
T ss_pred CCCcCCCcCHH
Confidence 99999999854
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-65 Score=515.80 Aligned_cols=317 Identities=35% Similarity=0.503 Sum_probs=294.8
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+. ++++++++||.||+++++++.++.+|+++|+++|++++. .++..+|.++|+++++.|+++.+
T Consensus 4 ~~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~-----~~~~~~R~~~l~~~a~~l~~~~~ 76 (472)
T TIGR03250 4 EALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRP-----TLTRYERSAILDRAAALLAARKE 76 (472)
T ss_pred CCceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHHHHHHHhHH
Confidence 37899999985 467899999999999999999999999999999988764 68999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc-----CCCCceEEEEEecc-eeEEEECCCCccHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-----GDGNYHIQTLHEPI-GVAGQIVPWNFPLLL 211 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~-Gvv~~i~p~N~P~~~ 211 (393)
+|++++++|+|||..+++. |+..+++.++|++..+.+..+...+ ...+...++.++|+ |||++|+|||||+..
T Consensus 77 ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~ 155 (472)
T TIGR03250 77 EISDLITLESGLSKKDSLY-EVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQ 155 (472)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHH
Confidence 9999999999999999885 9999999999999988776654332 11234567889998 999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+.+..|+.|++++.|.||||+.+|+.|+
T Consensus 156 ~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 235 (472)
T TIGR03250 156 VAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIA 235 (472)
T ss_pred HHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||
T Consensus 236 ~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p 312 (472)
T TIGR03250 236 ARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDP 312 (472)
T ss_pred HHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCC
Confidence 8864 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
+++++++||+++.+
T Consensus 313 ~~~~~~~gpli~~~ 326 (472)
T TIGR03250 313 MDPSVDMGTVIDEA 326 (472)
T ss_pred CCCCCcCCCCCCHH
Confidence 99999999998863
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-65 Score=514.67 Aligned_cols=312 Identities=51% Similarity=0.806 Sum_probs=294.2
Q ss_pred CeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh
Q 016216 73 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152 (393)
Q Consensus 73 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 152 (393)
++++++||+||+++++++.++.+|++++++.|++||+.+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 46899999999999999999999999999999999973459999999999999999999999999999999999999999
Q ss_pred hhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCC
Q 016216 153 QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232 (393)
Q Consensus 153 ~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~ 232 (393)
++...|+..+++.++|++...+++.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~ 161 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAE 161 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCC
Confidence 88655999999999999999888766544433445677899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeE
Q 016216 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF 312 (393)
Q Consensus 233 ~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~ 312 (393)
.+|.++..+.+++.++|+|+|++|+++|++.+.+..|..|++++.|.||||+++|+.|++.++..++||+++|+||+||+
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~ 241 (462)
T cd07112 162 QSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPN 241 (462)
T ss_pred CCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeE
Confidence 99999999999999999999999999997778899999999999999999999999999998844789999999999999
Q ss_pred EEcCCC-CHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 313 IIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 313 iV~~dA-Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
||++|+ |+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|+++++++||++++
T Consensus 242 iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~ 314 (462)
T cd07112 242 IVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSE 314 (462)
T ss_pred EECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCH
Confidence 999999 999999999999999999999999999999999999999999999999999999999999999875
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-65 Score=516.26 Aligned_cols=307 Identities=41% Similarity=0.651 Sum_probs=290.2
Q ss_pred eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 016216 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154 (393)
Q Consensus 75 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 154 (393)
++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS 78 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 46789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhcchHHHHHHHHHHHHhhhHhcCccccCCC-----CceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEe
Q 016216 155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGDG-----NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229 (393)
Q Consensus 155 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlK 229 (393)
+. |+..+++.++++++..+.+.+...+.+. +...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~K 157 (456)
T cd07145 79 RV-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK 157 (456)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEE
Confidence 85 9999999999999888766655433221 34567889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCC
Q 016216 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK 309 (393)
Q Consensus 230 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 309 (393)
||+.+|+++..+.+++.++|+|+|++|+++|++.+.++.|+.|++++.|.||||+++|+.|++.+++ +++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~v~lElgG~ 236 (456)
T cd07145 158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGG-TGKKVALELGGS 236 (456)
T ss_pred CCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCceEEecCCC
Confidence 9999999999999999999999999999999777889999999999999999999999999999987 889999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 310 ~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++||+++..
T Consensus 237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 312 (456)
T cd07145 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPE 312 (456)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998753
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-65 Score=512.66 Aligned_cols=305 Identities=39% Similarity=0.597 Sum_probs=288.4
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 156 (393)
++||.||+++++++.++.+|+++|++.|++||+.+.|+. +..+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999998334998 8999999999999999999999999999999999999985
Q ss_pred cchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChH
Q 016216 157 SEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236 (393)
Q Consensus 157 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~ 236 (393)
|+..+++.++||++..++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 80 -Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 -EISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 9999999999999998887665443333456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEc
Q 016216 237 TALYVAKLFHE-AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315 (393)
Q Consensus 237 ~~~~l~~ll~~-aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~ 315 (393)
++..+.+++++ +|+|+|++|+++|.+.++++.|+.|++++.|.||||+.+|+.|++.+++ ++||+++|+|||||+||+
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElGG~~~~IV~ 237 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAP-TLKRLGLELGGKTPCIVF 237 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeeEEC
Confidence 99999999999 7999999999999777889999999999999999999999999999887 889999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 316 ~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
+|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.|+++++||++++
T Consensus 238 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~ 306 (455)
T cd07120 238 DDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDR 306 (455)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999875
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-65 Score=514.49 Aligned_cols=305 Identities=40% Similarity=0.688 Sum_probs=289.1
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 156 (393)
++||.||+++++++.++.+|++.++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFK--TWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG 78 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999885
Q ss_pred cchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCCh
Q 016216 157 SEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235 (393)
Q Consensus 157 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p 235 (393)
|+..+++.++|++...++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (448)
T TIGR01780 79 -EILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTP 157 (448)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccch
Confidence 999999999999988877766544432 344567789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCC-chhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEE
Q 016216 236 LTALYVAKLFHEAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314 (393)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV 314 (393)
+++..+.++|.++|+|+|++|+++|. +.+.++.|+.|++++.|+||||+.+|+.|++.+++ ++||+++|+|||||+||
T Consensus 158 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~-~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 158 LSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSAS-TVKKVSMELGGNAPFIV 236 (448)
T ss_pred HHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeEE
Confidence 99999999999999999999999997 67888999999999999999999999999999987 88999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 315 ~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.
T Consensus 237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~ 307 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEK 307 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999864
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-65 Score=531.21 Aligned_cols=318 Identities=26% Similarity=0.342 Sum_probs=288.4
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
++||||+|+.+ .+++++++||.||+++++++.++ .|+++|+++|++| |+ .|+.++..+|.++|+++++.|+++.+
T Consensus 2 ~~~i~g~~~~~-~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ 77 (663)
T TIGR02278 2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGP--ALRALTFHERARMLKALAQYLSERKE 77 (663)
T ss_pred ceeECCEEEcC-CCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcch--hhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999875 36789999999999999999999 6999999999996 98 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhc--------CccccCC--CCceEEEEEecc-eeEEEECCCC
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH--------GLTVPGD--GNYHIQTLHEPI-GVAGQIVPWN 206 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~--------~~~~~~~--~~~~~~~~~~P~-Gvv~~i~p~N 206 (393)
+|++ +++|+|||+.+++. |+..+++.++||+...++.. +...+.. .+...++.++|+ |||++|+|||
T Consensus 78 ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN 155 (663)
T TIGR02278 78 ALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFN 155 (663)
T ss_pred HHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCc
Confidence 9999 59999999999885 99999999999999887632 3333321 123467899998 9999999999
Q ss_pred ccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChH
Q 016216 207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285 (393)
Q Consensus 207 ~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~ 285 (393)
||+...++++++||++||+||+|||+.+|+++..+.+++.++| +|+|+||+++|.. +..+..+++++.|+||||++
T Consensus 156 ~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 156 FPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 9999999999842 23333347789999999999
Q ss_pred HHHHHHHHHh-hcCCccEEEecCCCCeEEEcCCCC-----HHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHH
Q 016216 286 TGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDAD-----VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKA 359 (393)
Q Consensus 286 ~g~~i~~~~a-~~~~~pv~lelgG~~~~iV~~dAD-----ld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L 359 (393)
+|+.|++.++ ..+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l 312 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKAL 312 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHH
Confidence 9999998743 238899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhcCccCCCCCCCCccCcccccC
Q 016216 360 KARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 360 ~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+++++++++|||+++++++||||++.
T Consensus 313 ~~~~~~l~vG~p~~~~t~~Gpli~~~ 338 (663)
T TIGR02278 313 QARLAKVVLGDPREEGVDMGPLVSLE 338 (663)
T ss_pred HHHHHhccCCCccccCCCcCCCCCHH
Confidence 99999999999999999999999864
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=520.62 Aligned_cols=315 Identities=50% Similarity=0.798 Sum_probs=299.0
Q ss_pred eeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHH
Q 016216 66 FVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETW 145 (393)
Q Consensus 66 ~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~ 145 (393)
|+++.+ ++++++||.||++|++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 77 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFK--EWSKLPAAERARILERFADLLEERRDELAELIAL 77 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHH--HHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHH--hhhhhhhhhHHHHHHHHHHHHhhccccccccccc
Confidence 776644 7899999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCE
Q 016216 146 NNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNT 225 (393)
Q Consensus 146 e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~ 225 (393)
|+|||+.+++. |+..+++.++|++++.+++.+...+.+.+...++.++|+|||++|+|||||+...++++++||++||+
T Consensus 78 e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~ 156 (462)
T PF00171_consen 78 ETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNT 156 (462)
T ss_dssp HHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-E
T ss_pred ccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhccccc
Confidence 99999999997 99999999999999999987766666667889999999999999999999999999999999999999
Q ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEe
Q 016216 226 IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLE 305 (393)
Q Consensus 226 VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~le 305 (393)
||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|.||||+++|+.|.+.+++ +++|+++|
T Consensus 157 VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~-~~~~v~le 235 (462)
T PF00171_consen 157 VVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAK-NLKPVVLE 235 (462)
T ss_dssp EEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHT-TTSEEEEE
T ss_pred ceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccc-cccccccc
Confidence 99999999999999999999999999999999999889999999999999999999999999999999886 88999999
Q ss_pred cCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 306 LGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 306 lgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+||+||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++.+
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999864
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-64 Score=512.33 Aligned_cols=305 Identities=46% Similarity=0.749 Sum_probs=288.3
Q ss_pred ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 016216 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157 (393)
Q Consensus 78 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 157 (393)
+||+||+++++++.++.+|++++++.|++||+.+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++ .
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 80 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR-G 80 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence 589999999999999999999999999999984459999999999999999999999999999999999999999997 4
Q ss_pred chHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChH
Q 016216 158 EVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236 (393)
Q Consensus 158 Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~ 236 (393)
|+..+++.++|++.+.+++.+...+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~ 160 (454)
T cd07118 81 EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSG 160 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcH
Confidence 99999999999999877766554432 23345678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcC
Q 016216 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316 (393)
Q Consensus 237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~ 316 (393)
++..+.+++.++|+|+|++++++|++.+.++.|..|++++.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++
T Consensus 161 ~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~n~~iV~~ 239 (454)
T cd07118 161 TTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAAR-NLKKVSLELGGKNPQIVFA 239 (454)
T ss_pred HHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEeccCCCCceEECC
Confidence 999999999999999999999999777789999999999999999999999999999987 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 317 dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++
T Consensus 240 dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~ 307 (454)
T cd07118 240 DADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINE 307 (454)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-64 Score=515.03 Aligned_cols=322 Identities=32% Similarity=0.477 Sum_probs=297.4
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~ 91 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQK--AWAKTPLWKRAELLHKAAAILKEH 91 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHh
Confidence 445789999999766678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCc--ccc-----CC-CCceEEEEEecceeEEEECCCCc
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL--TVP-----GD-GNYHIQTLHEPIGVAGQIVPWNF 207 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~--~~~-----~~-~~~~~~~~~~P~Gvv~~i~p~N~ 207 (393)
+++|++++++|+|||..++. .|+..+++.++|++..+.+.... ..+ .. .+...+..++|+|||++|+||||
T Consensus 92 ~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~ 170 (496)
T PLN00412 92 KAPIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNY 170 (496)
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCc
Confidence 99999999999999999987 59999999999999877665322 211 11 12245678999999999999999
Q ss_pred cHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHH
Q 016216 208 PLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287 (393)
Q Consensus 208 P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 287 (393)
|+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|.+.+.+..|..|++++.|.|||| .+|
T Consensus 171 P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g 249 (496)
T PLN00412 171 PVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTG 249 (496)
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHH
Confidence 9999999999999999999999999999999999999999999999999999977788999999999999999999 999
Q ss_pred HHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCc
Q 016216 288 KIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI 367 (393)
Q Consensus 288 ~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~ 367 (393)
+.|++.++ ++|+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|++++++++
T Consensus 250 ~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 326 (496)
T PLN00412 250 IAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT 326 (496)
T ss_pred HHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence 99998864 699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCcccccC
Q 016216 368 VGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 368 ~G~p~~~~~~~Gpli~~~ 385 (393)
+|+|.+ ++++||++++.
T Consensus 327 ~g~p~~-~~~~gp~i~~~ 343 (496)
T PLN00412 327 VGPPED-DCDITPVVSES 343 (496)
T ss_pred cCCCcc-cCCcCCCcCHH
Confidence 999987 78999999853
|
|
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-64 Score=511.86 Aligned_cols=304 Identities=48% Similarity=0.772 Sum_probs=287.9
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 156 (393)
++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFP--RWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW 78 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999875
Q ss_pred cchHHHHHHHHHHHHhhhHhcC---ccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCC
Q 016216 157 SEVPMVVRLLHYYAGWADKIHG---LTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232 (393)
Q Consensus 157 ~Ev~~~~~~l~~~a~~~~~~~~---~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~ 232 (393)
|+..+++.++|+++..+++.. ...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 157 (456)
T cd07110 79 -DVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE 157 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence 999999999999999887642 222222 345678899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeE
Q 016216 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF 312 (393)
Q Consensus 233 ~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~ 312 (393)
.+|+++..+.+++.++|+|+|+||+++|.+.+.++.|+.|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+
T Consensus 158 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~~~ 236 (456)
T cd07110 158 LTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVSLELGGKSPI 236 (456)
T ss_pred cchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCeEEEEcCCCCee
Confidence 9999999999999999999999999999777789999999999999999999999999999887 889999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 313 IIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 313 iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|+++++++++|||.++++++||++++
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~ 308 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQ 308 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999875
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-64 Score=512.00 Aligned_cols=306 Identities=42% Similarity=0.663 Sum_probs=291.5
Q ss_pred eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 016216 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154 (393)
Q Consensus 75 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 154 (393)
++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||+.++
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 78 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFP--AWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKA 78 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHH
Confidence 46789999999999999999999999999999999 9999999999999999999999999999999999999999988
Q ss_pred hhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCC
Q 016216 155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233 (393)
Q Consensus 155 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~ 233 (393)
.. |+..+++.+++++.+.++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 157 (451)
T cd07150 79 WF-ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEE 157 (451)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCcc
Confidence 75 999999999999999888766555433 3556788999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEE
Q 016216 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (393)
Q Consensus 234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~i 313 (393)
+|.++..+.+++.++|+|+|++|+++|.+.+.+..|..|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+|
T Consensus 158 ~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~-~~~~~~lelGG~~~~i 236 (451)
T cd07150 158 TPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLI 236 (451)
T ss_pred CcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCceEeecCCCCeeE
Confidence 999999999999999999999999999777889999999999999999999999999999987 8899999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 314 V~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
|++|||+|.|++.+++++|.|+||.|++++++|||+++||+|+++|+++++++++|||.++++++||+++.
T Consensus 237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~ 307 (451)
T cd07150 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISP 307 (451)
T ss_pred ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-64 Score=531.70 Aligned_cols=320 Identities=27% Similarity=0.339 Sum_probs=288.0
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++||||+|+.+ ++++++++||.||+++++++.++ +|+++|+++|++| |+ .|++++..+|.++|+++++.|+++
T Consensus 4 ~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~--~W~~~~~~eR~~~L~~~a~~l~~~ 79 (675)
T PRK11563 4 KLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGP--ALRALTFHERAAMLKALAKYLLER 79 (675)
T ss_pred cccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhh--hhhcCCHHHHHHHHHHHHHHHHHh
Confidence 4478999999975 56789999999999999999987 6999999999998 78 899999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhc--------CccccCC--CCceEEEEEecc-eeEEEECC
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH--------GLTVPGD--GNYHIQTLHEPI-GVAGQIVP 204 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~--------~~~~~~~--~~~~~~~~~~P~-Gvv~~i~p 204 (393)
.++|++ ++.|+|||+.+++. |+..+++.++||+.++++.. +...+.. .....+..++|+ |||++|+|
T Consensus 80 ~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~P 157 (675)
T PRK11563 80 KEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINA 157 (675)
T ss_pred HHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECC
Confidence 999998 58999999999885 99999999999999886643 3332221 112246788997 99999999
Q ss_pred CCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCC
Q 016216 205 WNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGH 283 (393)
Q Consensus 205 ~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs 283 (393)
||||+...++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++. ..+..++.++.|.||||
T Consensus 158 wNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FTGS 234 (675)
T PRK11563 158 FNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFTGS 234 (675)
T ss_pred CchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999999 99999999998532 33444468999999999
Q ss_pred hHHHHHHHHHHh-hcCCccEEEecCCCCeEEEcCCCC-----HHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHH
Q 016216 284 CDTGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDAD-----VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVE 357 (393)
Q Consensus 284 ~~~g~~i~~~~a-~~~~~pv~lelgG~~~~iV~~dAD-----ld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~ 357 (393)
+++|+.|++.++ ..+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+|||+++||+|++
T Consensus 235 ~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~ 314 (675)
T PRK11563 235 AATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIE 314 (675)
T ss_pred HHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHH
Confidence 999999998632 238999999999999999999995 99999999999999999999999999999999999999
Q ss_pred HHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 358 KAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 358 ~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+|+++++++++|||+++++++||||++.
T Consensus 315 ~l~~~~~~l~vG~p~d~~t~~GPli~~~ 342 (675)
T PRK11563 315 ALRARLAKVVVGDPRLEGVRMGALASLE 342 (675)
T ss_pred HHHHHHhcCccCCCCCCCCcccCCcCHH
Confidence 9999999999999999999999999864
|
|
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-64 Score=517.33 Aligned_cols=327 Identities=38% Similarity=0.541 Sum_probs=302.1
Q ss_pred CCCcCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q 016216 51 PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAAD 130 (393)
Q Consensus 51 ~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~ 130 (393)
...+....+++|.|.|- .++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~--~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~ 87 (524)
T PRK09407 12 SALTFERLRRLTARVDG--AAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQR--AWAATPVRERAAVLLRFHD 87 (524)
T ss_pred ccccHHHHHHHHhhcCC--CCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHH
Confidence 33444556788888874 4778999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc-C--CCCceEEEEEecceeEEEECCCCc
Q 016216 131 LIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-G--DGNYHIQTLHEPIGVAGQIVPWNF 207 (393)
Q Consensus 131 ~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~P~Gvv~~i~p~N~ 207 (393)
.|+++.++|++++++|+|||..++. .|+..+++.++|++..+++..+.... . ......+..++|+|||++|+||||
T Consensus 88 ~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~ 166 (524)
T PRK09407 88 LVLENREELLDLVQLETGKARRHAF-EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNY 166 (524)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCC
Confidence 9999999999999999999999887 49999999999999988776543321 1 112457888999999999999999
Q ss_pred cHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHH
Q 016216 208 PLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287 (393)
Q Consensus 208 P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 287 (393)
|+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+.++.|+.| ++.|+||||+++|
T Consensus 167 Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g 244 (524)
T PRK09407 167 PLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATG 244 (524)
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999999999999999777888999976 7899999999999
Q ss_pred HHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCc
Q 016216 288 KIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI 367 (393)
Q Consensus 288 ~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~ 367 (393)
+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++++
T Consensus 245 ~~v~~~aa~-~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 323 (524)
T PRK09407 245 RVLAEQAGR-RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMR 323 (524)
T ss_pred HHHHHHHHh-cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 999999887 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCcccccC
Q 016216 368 VGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 368 ~G~p~~~~~~~Gpli~~~ 385 (393)
+|||.++++++||++++.
T Consensus 324 ~G~~~~~~~~~Gpli~~~ 341 (524)
T PRK09407 324 LGAGYDYSADMGSLISEA 341 (524)
T ss_pred CCCCCCcCCccCCCCCHH
Confidence 999999999999998753
|
|
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-64 Score=510.76 Aligned_cols=321 Identities=38% Similarity=0.543 Sum_probs=302.0
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHHHHHHHHcH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKM-TPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~-~~~~R~~~L~~~a~~l~~~~ 136 (393)
.++||||+|+.+. +++++++||.||+++++++.++.+|+++++++|++||+ .|+.+ +.++|.++|+++++.|.++.
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~~R~~~L~~~a~~l~~~~ 78 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR--GWWPTMPLEERIDCLHKFADLLKENK 78 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 3679999999764 78999999999999999999999999999999999999 99988 99999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-----CCceEEEEEecceeEEEECCCCccHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLL 211 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 211 (393)
++|++++++|+|||..++.. |+..+++.++++++..+++.+...+.. .+...+..++|+|||++|+|||||+..
T Consensus 79 ~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 157 (473)
T cd07082 79 EEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNL 157 (473)
T ss_pred HHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHH
Confidence 99999999999999999875 999999999999998887765544322 244567899999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|.+.++++.|..|+++|.|+||||+++|+.|.
T Consensus 158 ~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 158 TVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997777899999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.++ ++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|
T Consensus 238 ~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~ 314 (473)
T cd07082 238 KQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP 314 (473)
T ss_pred HHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8875 6999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
.++++++||+++..
T Consensus 315 ~~~~~~~gp~i~~~ 328 (473)
T cd07082 315 WDNGVDITPLIDPK 328 (473)
T ss_pred CCCCCCcCCCCCHH
Confidence 99999999999863
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-64 Score=511.20 Aligned_cols=304 Identities=53% Similarity=0.867 Sum_probs=290.8
Q ss_pred ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 016216 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157 (393)
Q Consensus 78 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 157 (393)
+||.||+++++++.++.++++++++.|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++...
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 79 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRL 79 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 69999999999999999999999999999999 9999999999999999999999999999999999999999998756
Q ss_pred chHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHH
Q 016216 158 EVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237 (393)
Q Consensus 158 Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~ 237 (393)
|+..+++.+++++.+.++..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 80 ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~ 159 (453)
T cd07115 80 DVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLS 159 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999999988776655554445567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCC
Q 016216 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD 317 (393)
Q Consensus 238 ~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~d 317 (393)
+..+.+++.++|+|+|++++++|++.++++.|+.|+++|.|+||||+++|+.|++.+++ ++||+++|+||++|+||++|
T Consensus 160 ~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~~p~iV~~d 238 (453)
T cd07115 160 ALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSLELGGKSANIVFAD 238 (453)
T ss_pred HHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCeEEEecCCCCceEECCC
Confidence 99999999999999999999999777888999999999999999999999999999987 88999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 318 ADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|||.++++++||++++
T Consensus 239 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~ 305 (453)
T cd07115 239 ADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQ 305 (453)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999986
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-64 Score=509.61 Aligned_cols=306 Identities=39% Similarity=0.548 Sum_probs=289.0
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP-KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL 155 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 155 (393)
++||.||+++++++.++.+|+++++++|++||+ .|+ .+|..+|.++|+++++.|+++.++|++++++|+|||+.++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~ 78 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFD--TGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTAR 78 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 479999999999999999999999999999999 899 99999999999999999999999999999999999997766
Q ss_pred hcchHHHHHHHHHHHHhhhHhcCccc-cCC----CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEec
Q 016216 156 KSEVPMVVRLLHYYAGWADKIHGLTV-PGD----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS 230 (393)
Q Consensus 156 ~~Ev~~~~~~l~~~a~~~~~~~~~~~-~~~----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKp 230 (393)
..|+..+++.++|+++..++..+... +.. .+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 79 ~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKp 158 (459)
T cd07089 79 AMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKP 158 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEEC
Confidence 56999999999999999887655542 221 2456789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCC
Q 016216 231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310 (393)
Q Consensus 231 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~ 310 (393)
|+.+|.++..+.++|.++|+|+|++++++|.+.+++..|..|++++.|.||||+.+|+.|++.+++ ++||+++|+||||
T Consensus 159 s~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~n 237 (459)
T cd07089 159 APDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAA-TLKRVLLELGGKS 237 (459)
T ss_pred CCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCC
Confidence 999999999999999999999999999999777789999999999999999999999999999987 8899999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 311 ~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|+||++|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|||.++++++||++++.
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~ 312 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAA 312 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999853
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-64 Score=508.23 Aligned_cols=304 Identities=32% Similarity=0.446 Sum_probs=284.9
Q ss_pred eeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCC-CCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 016216 76 PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP-WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154 (393)
Q Consensus 76 ~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~-W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 154 (393)
+++||.||+++++++.++.+|+++++++|++||+ . |+.++.++|.++|+++++.|+++.++|++++++|+|||..++
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 79 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFL--DRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDA 79 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHh--hcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 5789999999999999999999999999999998 7 567999999999999999999999999999999999999998
Q ss_pred hhcchHHHHHHHHHHHHhhhHhcCccccCC-----CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEe
Q 016216 155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229 (393)
Q Consensus 155 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlK 229 (393)
.. |+..+++.++|++..++++.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 80 ~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlK 158 (455)
T cd07148 80 KV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK 158 (455)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEee
Confidence 75 999999999999999887765543321 234567899999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCC
Q 016216 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK 309 (393)
Q Consensus 230 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 309 (393)
||+.+|+++..+.+++.++|+|+|++|+++|+ .+.++.|+.|+++|.|.||||+++|+.|++.++. . +|+++|+|||
T Consensus 159 ps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~-~~~~lElGG~ 235 (455)
T cd07148 159 PALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-G-TRCALEHGGA 235 (455)
T ss_pred CCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-C-CcEEEecCCC
Confidence 99999999999999999999999999999984 4678999999999999999999999999998875 4 8999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 310 ~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.
T Consensus 236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 311 (455)
T cd07148 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPR 311 (455)
T ss_pred CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999853
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-64 Score=509.64 Aligned_cols=303 Identities=49% Similarity=0.784 Sum_probs=287.9
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP-KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL 155 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 155 (393)
++||+||+++++++.++.+|++++++.|++||+ .|. .++.++|.++|+++++.|+++.++|++++++|+|||..+++
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~--~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 78 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFE--SGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR 78 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH
Confidence 479999999999999999999999999999998 876 99999999999999999999999999999999999999988
Q ss_pred hcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCCh
Q 016216 156 KSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235 (393)
Q Consensus 156 ~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p 235 (393)
. |+..+++.++|+++..+++.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 ~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p 157 (454)
T cd07109 79 A-DVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAP 157 (454)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 5 999999999999998888776555544455678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEc
Q 016216 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315 (393)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~ 315 (393)
+++..+.+++.++|+|+|++|+++|.+.+.++.|+.|+++|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~p~~lElgG~~~~iV~ 236 (454)
T cd07109 158 LTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAE-NVVPVTLELGGKSPQIVF 236 (454)
T ss_pred HHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEECCCCCceEEC
Confidence 9999999999999999999999999777889999999999999999999999999999887 889999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 316 ~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
+|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.+ .+++||++++
T Consensus 237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~ 304 (454)
T cd07109 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISA 304 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCH
Confidence 9999999999999999999999999999999999999999999999999999999986 5899999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-64 Score=509.61 Aligned_cols=304 Identities=42% Similarity=0.678 Sum_probs=288.1
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 156 (393)
++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 77 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFP--EWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML- 77 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-
Confidence 479999999999999999999999999999999 99999999999999999999999999999999999999999987
Q ss_pred cchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChH
Q 016216 157 SEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236 (393)
Q Consensus 157 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~ 236 (393)
.|+..+++.++|++...+.+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 78 ~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~ 157 (456)
T cd07107 78 GDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPL 157 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChH
Confidence 59999999999999888777666555444556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcC
Q 016216 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316 (393)
Q Consensus 237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~ 316 (393)
++..+.+++.++ +|+|+||+++|++.+.++.|+.|+.++.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV~~ 235 (456)
T cd07107 158 SALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAE-GIKHVTLELGGKNALIVFP 235 (456)
T ss_pred HHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-CCCeEEEECCCCCeEEECC
Confidence 999999999995 99999999999777788999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHH-HhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 317 DADVDQAVELAHFAL-FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 317 dADld~a~~~i~~~~-~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|||+|.|++.+++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.
T Consensus 236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~ 305 (456)
T cd07107 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQ 305 (456)
T ss_pred CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHH
Confidence 999999999999995 999999999999999999999999999999999999999999999999998753
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-64 Score=509.42 Aligned_cols=303 Identities=46% Similarity=0.728 Sum_probs=288.4
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 156 (393)
++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++.
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 78 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQK--EWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV 78 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999988875
Q ss_pred cchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChH
Q 016216 157 SEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236 (393)
Q Consensus 157 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~ 236 (393)
|+..+++.++|++++.+++.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 79 -ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~ 157 (457)
T cd07090 79 -DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPL 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcH
Confidence 9999999999999988877665544444566788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcC
Q 016216 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316 (393)
Q Consensus 237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~ 316 (393)
++..+.+++.++|+|+|++|+++|++ +.++.|+.|++++.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 158 TALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAK-GIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc-cCCceEEecCCCCceEECC
Confidence 99999999999999999999999854 588999999999999999999999999999987 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 317 dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||+++++++||+++.
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~ 303 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISE 303 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999864
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=506.21 Aligned_cols=307 Identities=51% Similarity=0.802 Sum_probs=289.8
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 156 (393)
++||.||++|++++.++.+|+++++++|++|++.+.|+.+|.++|.++|+++++.|.+++++|++++++|+|||+.+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 46999999999999999999999999999999744699999999999999999999999999999999999999999885
Q ss_pred cchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCCh
Q 016216 157 SEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235 (393)
Q Consensus 157 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p 235 (393)
|+..+++.+++++.+.+++.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 -ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p 159 (457)
T cd07114 81 -QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTP 159 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccch
Confidence 999999999999988877765544433 345678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEc
Q 016216 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315 (393)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~ 315 (393)
.++..+.++|.++|+|+|+||+++|++.+.++.|..|++++.|+||||+++|+.|++.+++ ++||+++|+||+||+||+
T Consensus 160 ~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 238 (457)
T cd07114 160 ASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAE-NLAPVTLELGGKSPNIVF 238 (457)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEecCCCCeeEEC
Confidence 9999999999999999999999999777788999999999999999999999999999987 889999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 316 ~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|+++++++++|||.++++++||++++.
T Consensus 239 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 308 (457)
T cd07114 239 DDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATER 308 (457)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999854
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-63 Score=538.01 Aligned_cols=319 Identities=37% Similarity=0.549 Sum_probs=300.6
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCc-eEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAE-VIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~-~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
.+.+||| ++++++++||.|++ +|++++.++.+|+++|+++|++||+ .|+.+|.++|.++|+++++.|++++
T Consensus 553 ~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~--~W~~~~~~~Ra~iL~kaAdll~~~~ 624 (1038)
T PRK11904 553 AGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFP--AWSRTPVEERAAILERAADLLEANR 624 (1038)
T ss_pred ecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhH
Confidence 3557787 46789999999988 9999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCc--cccCCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL--TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
++|+.+++.|+|||+.++. .|+..++++++||+..+++..+. ..+...+..++..++|+|||++|+|||||+..+++
T Consensus 625 ~eL~~l~~~E~GK~~~~a~-~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~ 703 (1038)
T PRK11904 625 AELIALCVREAGKTLQDAI-AEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLG 703 (1038)
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHH
Confidence 9999999999999999987 49999999999999999887643 33444567788999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+++|+++..+.++++++|+|+|+||+++|.+.++++.|+.|++|+.|+||||+++|+.|.+.+
T Consensus 704 ~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~ 783 (1038)
T PRK11904 704 QVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTL 783 (1038)
T ss_pred HHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999988
Q ss_pred hhc--CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 295 AKS--NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 295 a~~--~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
+.+ .++|+++|+|||||+||++|||+|+|++.+++++|.|+||.|++++++|||+++||+|+++|+++++++++|||.
T Consensus 784 A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~ 863 (1038)
T PRK11904 784 AARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPR 863 (1038)
T ss_pred hhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcc
Confidence 863 268999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
++++++||+|++.
T Consensus 864 d~~t~~GPvI~~~ 876 (1038)
T PRK11904 864 LLSTDVGPVIDAE 876 (1038)
T ss_pred cccCCccCCCCHH
Confidence 9999999999864
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-63 Score=501.39 Aligned_cols=311 Identities=24% Similarity=0.315 Sum_probs=283.7
Q ss_pred ceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCC--CCCCHHHH----HHHHHHHHHHHH
Q 016216 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPW--PKMTPYER----SRIMLRAADLIE 133 (393)
Q Consensus 60 ~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W--~~~~~~~R----~~~L~~~a~~l~ 133 (393)
+||||+|+.+ +++++++||.||+++++++.++.+|+++|+++|++||+ .| ..++..+| .++|.++++.|+
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~~~R~l~~~~il~~~a~~l~ 76 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK--SGLHNPLKNPERYLLYGDVSHRVAHELR 76 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hccccCCCHHHHhhhHHHHHHHHHHHHH
Confidence 4799999864 57899999999999999999999999999999999999 77 66779999 899999999999
Q ss_pred Hc--HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccc--cC-CCCceEEEEEecceeEEEECCCCcc
Q 016216 134 KN--MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV--PG-DGNYHIQTLHEPIGVAGQIVPWNFP 208 (393)
Q Consensus 134 ~~--~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~--~~-~~~~~~~~~~~P~Gvv~~i~p~N~P 208 (393)
++ .++|++++++|+|||+.+++. |+..+++.++||++..++..+... +. ..+...++.++|+|||++|+|||||
T Consensus 77 ~~~~~~~la~~~~~e~GK~~~~a~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP 155 (489)
T cd07126 77 KPEVEDFFARLIQRVAPKSDAQALG-EVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFP 155 (489)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchH
Confidence 98 599999999999999999874 999999999999998877655442 21 1244568899999999999999999
Q ss_pred HHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHH
Q 016216 209 LLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK 288 (393)
Q Consensus 209 ~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 288 (393)
+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+ +..++.|++++.|+||||+++|+
T Consensus 156 ~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr 234 (489)
T cd07126 156 LEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAE 234 (489)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999999999999996655 45588899999999999999999
Q ss_pred HHHHHHhhcCCccEEEecCCCCeEEEcCCC-CHHHHHHHHHHHHHhccCCCccCCceEEEcCcc-HHHHHHHHHHHHhcC
Q 016216 289 IVQELAAKSNLKPVTLELGGKSPFIIFDDA-DVDQAVELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARAMRR 366 (393)
Q Consensus 289 ~i~~~~a~~~~~pv~lelgG~~~~iV~~dA-Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~L~~~~~~~ 366 (393)
.|...++ +++++|+||+||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++
T Consensus 235 ~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~ 310 (489)
T cd07126 235 RLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQR 310 (489)
T ss_pred HHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhc
Confidence 9988765 4799999999999999999 999999999999999999999999999999995 699999999999999
Q ss_pred ccCCCCCCCCccCcccccC
Q 016216 367 IVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 367 ~~G~p~~~~~~~Gpli~~~ 385 (393)
++|+ +++||+++..
T Consensus 311 ~~g~-----~~~Gpli~~~ 324 (489)
T cd07126 311 KLED-----LTIGPVLTWT 324 (489)
T ss_pred ccCC-----CcCCCCcCHH
Confidence 9885 4789998653
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-63 Score=502.21 Aligned_cols=302 Identities=37% Similarity=0.560 Sum_probs=283.7
Q ss_pred ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 016216 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157 (393)
Q Consensus 78 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 157 (393)
.||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++. .
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ 77 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQR--AWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-E 77 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-H
Confidence 38999999999999999999999999999999 99999999999999999999999999999999999999999987 5
Q ss_pred chHHHHHHHHHHHHhhhHhcCccc-cC--CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCC
Q 016216 158 EVPMVVRLLHYYAGWADKIHGLTV-PG--DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234 (393)
Q Consensus 158 Ev~~~~~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~ 234 (393)
|+..+++.++|++..+.++..... +. ......+..++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~ 157 (454)
T cd07101 78 EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQT 157 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 999999999999998877654332 11 123456889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEE
Q 016216 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314 (393)
Q Consensus 235 p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV 314 (393)
|+++..+.+++.++|+|+|++|+++|.+.+.+..|++| ++.|.||||+++|+.|++.+++ +++|+++|+|||||+||
T Consensus 158 p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElgG~~p~iV 234 (454)
T cd07101 158 ALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR-RLIGCSLELGGKNPMIV 234 (454)
T ss_pred hHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCceEEE
Confidence 99999999999999999999999999888888999986 5889999999999999999987 88999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 315 ~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++|||+++.
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~ 305 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQA 305 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999853
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-63 Score=499.14 Aligned_cols=300 Identities=45% Similarity=0.675 Sum_probs=282.3
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 156 (393)
++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 78 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFP--GWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF 78 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999998875
Q ss_pred cchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChH
Q 016216 157 SEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236 (393)
Q Consensus 157 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~ 236 (393)
|+..+++.++++++... .+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 79 -ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 155 (446)
T cd07106 79 -EVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL 155 (446)
T ss_pred -HHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999999988763 222233223456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcC
Q 016216 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316 (393)
Q Consensus 237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~ 316 (393)
++..+.+++.++ +|+|++++++| +.+.+..|..|+++|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||++
T Consensus 156 ~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~-~~~~~~lElGG~~p~iV~~ 232 (446)
T cd07106 156 CTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAK-TLKRVTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeeEEecCCCCeeEECC
Confidence 999999999995 99999999998 45688999999999999999999999999999887 8999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 317 dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
|||+|.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++++++|||.++++++||++++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~ 300 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNK 300 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-63 Score=498.89 Aligned_cols=303 Identities=36% Similarity=0.547 Sum_probs=286.9
Q ss_pred ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 016216 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157 (393)
Q Consensus 78 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 157 (393)
+||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||..+++ .
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ 77 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQK--GWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-G 77 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-H
Confidence 48999999999999999999999999999999 99999999999999999999999999999999999999999987 4
Q ss_pred chHHHHHHHHHHHHhhhHhcCcc-ccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChH
Q 016216 158 EVPMVVRLLHYYAGWADKIHGLT-VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236 (393)
Q Consensus 158 Ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~ 236 (393)
|+..+++.+++++...++..+.. .+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 78 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 157 (452)
T cd07102 78 EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPL 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcH
Confidence 99999999999999887765443 23334556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcC
Q 016216 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316 (393)
Q Consensus 237 ~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~ 316 (393)
++..|.++|.++|+|+|++|+++|++ +.+..|+.|+.++.|.||||+++|+.|++.+++ +++|+++|+|||||+||++
T Consensus 158 ~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~v~lelgG~~~~iV~~ 235 (452)
T cd07102 158 CGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKVGLELGGKDPAYVRP 235 (452)
T ss_pred HHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh-cCCcEEEECCCCCceEEcC
Confidence 99999999999999999999999966 788999999999999999999999999999886 8899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 317 dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|||+|.|++.+++++|+|+||.|++++++|||++++|+|+++|+++++++++|||.++++++||+++..
T Consensus 236 dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~ 304 (452)
T cd07102 236 DADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSAR 304 (452)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998753
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=498.85 Aligned_cols=303 Identities=45% Similarity=0.761 Sum_probs=286.4
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh-hhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY-VQSL 155 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~ 155 (393)
++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||. .+++
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~ 78 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFP--EWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR 78 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH
Confidence 479999999999999999999999999999999 9999999999999999999999999999999999999997 5776
Q ss_pred hcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCCh
Q 016216 156 KSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235 (393)
Q Consensus 156 ~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p 235 (393)
.|+..+++.++++++....+.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p 157 (457)
T cd07108 79 -PEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAP 157 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 5999999999999998877766655543445567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEc
Q 016216 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315 (393)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~ 315 (393)
.++..+.+++.++ +|+|++++++|.+.+.++.|..|+++|.|.||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~-~l~~~~lelgG~~~~iV~ 235 (457)
T cd07108 158 LAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAAD-RLIPVSLELGGKSPMIVF 235 (457)
T ss_pred HHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhc-cCCeEEEECCCCCeeEEC
Confidence 9999999999986 99999999999777888999999999999999999999999999987 889999999999999999
Q ss_pred CCCCHHHHHHHHHHH-HHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 316 DDADVDQAVELAHFA-LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 316 ~dADld~a~~~i~~~-~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
+|||++.|++.++++ +|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++
T Consensus 236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~ 305 (457)
T cd07108 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISE 305 (457)
T ss_pred CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCH
Confidence 999999999999999 599999999999999999999999999999999999999999999999999875
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-62 Score=498.01 Aligned_cols=305 Identities=49% Similarity=0.725 Sum_probs=286.4
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 156 (393)
++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|.++.++|++++++|+|||..++..
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 78 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFP--SWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRD 78 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999977665
Q ss_pred cchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCCh
Q 016216 157 SEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235 (393)
Q Consensus 157 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p 235 (393)
.|+..+++.+++++...+.+.+...+. ..+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|
T Consensus 79 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 158 (450)
T cd07092 79 DELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP 158 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 699999999999998887765543221 1234567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEc
Q 016216 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315 (393)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~ 315 (393)
.++..+.++|++ |+|+|++|+++|.+.+.++.|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||+
T Consensus 159 ~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~-~~~~~~lelgG~~p~iV~ 236 (450)
T cd07092 159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLKRVHLELGGKAPVIVF 236 (450)
T ss_pred HHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCCcEEEECCCCCeeEEC
Confidence 999999999999 999999999999777788999999999999999999999999999997 889999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 316 ~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+|||+|.|++.+++++|+|+||.|++++++|||++++|+|+++|+++++++++|||.++++++||++++.
T Consensus 237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 306 (450)
T cd07092 237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAA 306 (450)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999853
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-62 Score=497.98 Aligned_cols=305 Identities=41% Similarity=0.607 Sum_probs=288.4
Q ss_pred eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 016216 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154 (393)
Q Consensus 75 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 154 (393)
++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|.++++.|+++.++|++++++|+|||..++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 78 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 35789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhcchHHHHHHHHHHHHhhhHhcCccccCC-----CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEe
Q 016216 155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229 (393)
Q Consensus 155 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlK 229 (393)
+. |+..+++.+++++...++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~K 157 (453)
T cd07094 79 RV-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLK 157 (453)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEE
Confidence 85 999999999999998888766544432 244567889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCC
Q 016216 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK 309 (393)
Q Consensus 230 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 309 (393)
||+.+|+++..+++++.++|+|+|+|++++|++.++++.|..|++++.|+||||+++|+.|++.+ +++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk 234 (453)
T cd07094 158 PASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA---GGKRIALELGGN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc---CCCceEEecCCC
Confidence 99999999999999999999999999999997778899999999999999999999999999987 569999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 310 ~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus 235 ~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~ 310 (453)
T cd07094 235 APVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEE 310 (453)
T ss_pred CceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998753
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-62 Score=497.76 Aligned_cols=305 Identities=46% Similarity=0.720 Sum_probs=289.9
Q ss_pred eecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhh
Q 016216 77 VYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156 (393)
Q Consensus 77 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 156 (393)
++||.||+++++++.++.+|++++++.|++|++ .|+.++.++|.++|+++++.|.++.++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 78 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFK--TWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG 78 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 479999999999999999999999999999999 999999999999999999999999999999999999999999885
Q ss_pred cchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCCh
Q 016216 157 SEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235 (393)
Q Consensus 157 ~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p 235 (393)
|+..+++.++|++...++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 79 -ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~ 157 (451)
T cd07103 79 -EVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETP 157 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCc
Confidence 999999999999988877766554432 355678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEc
Q 016216 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315 (393)
Q Consensus 236 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~ 315 (393)
.++..+.++|.++|+|+|++++++|++.+.++.|+.|+++|.|+||||+.+|+.|.+.+++ +++|+++|+|||||+||+
T Consensus 158 ~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 158 LSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD-TVKRVSLELGGNAPFIVF 236 (451)
T ss_pred HHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEEC
Confidence 9999999999999999999999999777788999999999999999999999999999987 889999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 316 ~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus 237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~ 306 (451)
T cd07103 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINER 306 (451)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999854
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-62 Score=497.99 Aligned_cols=304 Identities=37% Similarity=0.529 Sum_probs=284.3
Q ss_pred eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 016216 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154 (393)
Q Consensus 75 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 154 (393)
++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.++
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFR--PMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHH
Confidence 46789999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred hhcchHHHHHHHHHHHHhhhHhcCccccCC-----CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEe
Q 016216 155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229 (393)
Q Consensus 155 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlK 229 (393)
+. |+..+++.+++++..+.+..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlK 157 (452)
T cd07147 79 RG-EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157 (452)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 85 999999999999998876654433211 234567789999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCC
Q 016216 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK 309 (393)
Q Consensus 230 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 309 (393)
||+.+|.++..+.++|.++|+|+|+||+++|+ .+.+..|+.|++++.|.||||+.+|+.|++.++. +|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~---~~v~lelgG~ 233 (452)
T cd07147 158 PASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGN 233 (452)
T ss_pred CCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc---CceEeecCCC
Confidence 99999999999999999999999999999984 4678899999999999999999999999998764 7999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 310 ~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
||+||++|||+|.|++.+++++|+|+||.|+++++||||+++||+|+++|+++++++++|||.++++++||+++..
T Consensus 234 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~ 309 (452)
T cd07147 234 AAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISES 309 (452)
T ss_pred CcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998754
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-62 Score=497.17 Aligned_cols=305 Identities=50% Similarity=0.839 Sum_probs=289.5
Q ss_pred ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 016216 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157 (393)
Q Consensus 78 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 157 (393)
+||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++..
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ 79 (455)
T cd07093 2 FNPATGEVLAKVPEGGAAEVDAAVAAAKEAFP--GWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTR 79 (455)
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 69999999999999999999999999999999 9999999999999999999999999999999999999999888667
Q ss_pred chHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHH
Q 016216 158 EVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237 (393)
Q Consensus 158 Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~ 237 (393)
|+..+++.++++++...+..+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 80 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 80 DIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 99999999999998877655444444445667889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCC
Q 016216 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDD 317 (393)
Q Consensus 238 ~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~d 317 (393)
+..+.++|.++|+|+|+|++++|.+.+.++.|+.|++++.|+||||+.+|+.|.+.+++ +++|+++|+||+||+||++|
T Consensus 160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~d 238 (455)
T cd07093 160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLELGGKNPNIVFAD 238 (455)
T ss_pred HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh-cccceEeecCCCCceEECCC
Confidence 99999999999999999999999777888999999999999999999999999999997 88999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 318 ADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||+++..
T Consensus 239 Adl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 306 (455)
T cd07093 239 ADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKE 306 (455)
T ss_pred CCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998753
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-63 Score=537.59 Aligned_cols=309 Identities=32% Similarity=0.523 Sum_probs=291.0
Q ss_pred cceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
..+|+|+. ..+.+++++||.| +++|++++.++.+|++.|+++|++||+ .|+.+|..+|.++|+++++.|+++.+
T Consensus 648 ~p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~--~W~~~p~~eRa~iL~r~Adlle~~~~ 722 (1318)
T PRK11809 648 APMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAP--IWFATPPAERAAILERAADLMEAQMQ 722 (1318)
T ss_pred CCcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 44667742 3567899999999 889999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
+|+.+++.|+|||+.++.. |+..++++++||+..++.... ...++|+|||++|+|||||+..++++++
T Consensus 723 eL~~l~~~EaGKt~~~A~~-EV~eaidflryyA~~a~~~~~-----------~~~~~PlGVV~~IsPWNFPlai~~g~ia 790 (1318)
T PRK11809 723 TLMGLLVREAGKTFSNAIA-EVREAVDFLRYYAGQVRDDFD-----------NDTHRPLGPVVCISPWNFPLAIFTGQVA 790 (1318)
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------CceeecccEEEEECCCccHHHHHHHHHH
Confidence 9999999999999999874 999999999999988764311 2458999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 297 (393)
+||++||+||+||++++|+++..++++++++|+|+|+||+++|.+.+++..|+.|++|++|+||||+++|+.|.+.+++
T Consensus 791 aALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~- 869 (1318)
T PRK11809 791 AALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAG- 869 (1318)
T ss_pred HHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999888899999999999999999999999999999886
Q ss_pred CC------ccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 298 NL------KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 298 ~~------~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
++ +|+++|+||+|++||++|||+|+|++.+++++|.++||.|++.+++|||+++||+|+++|+++++++++|||
T Consensus 870 ~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP 949 (1318)
T PRK11809 870 RLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNP 949 (1318)
T ss_pred hcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCc
Confidence 44 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
.+.++++||+|++.
T Consensus 950 ~~~~tdvGPvId~~ 963 (1318)
T PRK11809 950 DRLSTDIGPVIDAE 963 (1318)
T ss_pred ccccCCcCCCCCHH
Confidence 99999999999865
|
|
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-62 Score=495.49 Aligned_cols=301 Identities=38% Similarity=0.571 Sum_probs=283.6
Q ss_pred ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 016216 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157 (393)
Q Consensus 78 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 157 (393)
+||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++. .
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ 77 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQR--AWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-L 77 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-H
Confidence 48999999999999999999999999999999 99999999999999999999999999999999999999999776 4
Q ss_pred chHHHHHHHHHHHHhhhHhcCcc-ccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCC
Q 016216 158 EVPMVVRLLHYYAGWADKIHGLT-VPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233 (393)
Q Consensus 158 Ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~ 233 (393)
|+..+++.++|+++.+.++.+.. .+. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 78 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~ 157 (453)
T cd07099 78 EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999999887765432 221 13456788999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEE
Q 016216 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (393)
Q Consensus 234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~i 313 (393)
+|+++..+.+++.++|+|+|++++++|++ +.+..|+.| .+|.|+||||+++|+.|.+.+++ +++|+++|+|||||+|
T Consensus 158 ~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~i 234 (453)
T cd07099 158 TPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE-RLIPVVLELGGKDPMI 234 (453)
T ss_pred chHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCCCeEE
Confidence 99999999999999999999999999965 678889987 59999999999999999999987 7899999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 314 V~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
|++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|+++++++++|+|.|+++++||++++
T Consensus 235 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~ 305 (453)
T cd07099 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTA 305 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-62 Score=494.70 Aligned_cols=297 Identities=40% Similarity=0.621 Sum_probs=280.8
Q ss_pred CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHH
Q 016216 83 AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMV 162 (393)
Q Consensus 83 g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~ 162 (393)
|+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..++.. |+..+
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~ 77 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQR--AWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAA 77 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHH
Confidence 689999999999999999999999999 999999999999999999999999999999999999999998875 99999
Q ss_pred HHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHH-HHH
Q 016216 163 VRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTA-LYV 241 (393)
Q Consensus 163 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~-~~l 241 (393)
++.+++++...++..+...+...+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++ ..+
T Consensus 78 i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l 157 (443)
T cd07152 78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVI 157 (443)
T ss_pred HHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHH
Confidence 9999999988766555544443455678899999999999999999999999999999999999999999999996 789
Q ss_pred HHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHH
Q 016216 242 AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVD 321 (393)
Q Consensus 242 ~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld 321 (393)
.++|.++|+|+|++|+++| +.+.+..|..|++++.|+||||+.+|+.|.+.+++ ++||+++|+|||||+||++|||+|
T Consensus 158 ~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~-~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCcEEEECCCCCeEEECCCCCHH
Confidence 9999999999999999998 56788999999999999999999999999999887 889999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 322 QAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 322 ~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.++++++||++++
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~ 298 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINA 298 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCH
Confidence 999999999999999999999999999999999999999999999999999999999999984
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-62 Score=495.64 Aligned_cols=304 Identities=31% Similarity=0.505 Sum_probs=281.5
Q ss_pred ecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc
Q 016216 78 YDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157 (393)
Q Consensus 78 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ 157 (393)
+||.||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|+++++.|.++.++|++++++|+|||+.+++..
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ 78 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQR--EWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLG 78 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 58999999999999999999999999999999 9999999999999999999999999999999999999999998767
Q ss_pred chHHHHHHHHHHHHhhhHhcCc-cccCC---CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCC
Q 016216 158 EVPMVVRLLHYYAGWADKIHGL-TVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233 (393)
Q Consensus 158 Ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~ 233 (393)
|+..+++.++|++...++.... ..+.. .+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus 79 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~ 158 (465)
T cd07098 79 EILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQ 158 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999999877664322 22211 1334678899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCC
Q 016216 234 TPLTALYVAKL----FHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK 309 (393)
Q Consensus 234 ~p~~~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 309 (393)
+|+++..++++ |.++|+|+|+||+++|++ +.++.|+.|++|+.|.||||+++|+.|.+.+++ +++|+++|+|||
T Consensus 159 ~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~-~~~~~~lelgG~ 236 (465)
T cd07098 159 VAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE-SLTPVVLELGGK 236 (465)
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEECCCC
Confidence 99999876655 468999999999999955 789999999999999999999999999999987 889999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 310 ~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++|||+++.
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~ 312 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPA 312 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998853
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-62 Score=492.23 Aligned_cols=287 Identities=26% Similarity=0.320 Sum_probs=265.4
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHH
Q 016216 92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171 (393)
Q Consensus 92 ~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 171 (393)
-...|+++++++|++||+ .|+.++..+|.++|+++++.|++|.++|+++++.|+|||..++...|+..+++.++|+++
T Consensus 7 ~~~~~v~~av~~a~~af~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 7 FGAADASILVTELRRSFD--DGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred cCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999 999999999999999999999999999999999999999988876699999999999999
Q ss_pred hhhHhcCc----cccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 016216 172 WADKIHGL----TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE 247 (393)
Q Consensus 172 ~~~~~~~~----~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~ 247 (393)
..++..+. ..+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~ 164 (484)
T PLN02174 85 QLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ 164 (484)
T ss_pred HHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 88876652 22222233567899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHH
Q 016216 248 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELA 327 (393)
Q Consensus 248 aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i 327 (393)
++|+|+||+++|. .+.+..|+. +.+|.|+||||+++|+.|++.+++ +++|+++|||||||+||++|||+|.|++.+
T Consensus 165 -~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~-~l~~v~LELGGk~p~iV~~dADl~~Aa~~i 240 (484)
T PLN02174 165 -YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAK-HLTPVVLELGGKSPVVVDSDTDLKVTVRRI 240 (484)
T ss_pred -hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHh-cCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence 6999999999984 445677776 899999999999999999999997 899999999999999999999999999999
Q ss_pred HHHHH-hccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 328 HFALF-YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 328 ~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++++| .|+||.|++++|+|||+++||+|+++|+++++++++|||.+ ++++||+|++.
T Consensus 241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~ 298 (484)
T PLN02174 241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNST 298 (484)
T ss_pred HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHH
Confidence 99999 69999999999999999999999999999999999999988 78999999864
|
|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-62 Score=490.81 Aligned_cols=301 Identities=39% Similarity=0.568 Sum_probs=281.6
Q ss_pred eeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh
Q 016216 76 PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL 155 (393)
Q Consensus 76 ~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 155 (393)
+++||+||+++++++.++.+|+++++++|++ .|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~-----~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 76 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAAS-----YRSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR 76 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHH-----HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 5789999999999999999999999999876 38789999999999999999999999999999999999999997
Q ss_pred hcchHHHHHHHHHHHHhhhHhcCccccCC-----CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEec
Q 016216 156 KSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS 230 (393)
Q Consensus 156 ~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKp 230 (393)
. |+..+++.++|++....+..+...+.. .+...+..++|+|||++|+|||||++..++++++||++||+||+||
T Consensus 77 ~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKp 155 (451)
T cd07146 77 Y-EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKP 155 (451)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 4 999999999999988876655443321 2345678899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCC
Q 016216 231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310 (393)
Q Consensus 231 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~ 310 (393)
|+.+|+++..+.++|.++|+|+|++++++|++.++++.|++|++++.|+||||+.+|+.|.+.++ ++|+++|+||||
T Consensus 156 s~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~ 232 (451)
T cd07146 156 SEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGND 232 (451)
T ss_pred CCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCc
Confidence 99999999999999999999999999999977788999999999999999999999999998764 589999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 311 ~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||.|+++++|||+++.
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~ 307 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEE 307 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999874
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-61 Score=487.96 Aligned_cols=304 Identities=41% Similarity=0.627 Sum_probs=285.6
Q ss_pred eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhh
Q 016216 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154 (393)
Q Consensus 75 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 154 (393)
|+++||+||+++++++.++.+++++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 78 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAK--EMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA 78 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHH
Confidence 46789999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhcchHHHHHHHHHHHHhhhHhcCccccCC-----CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEe
Q 016216 155 LKSEVPMVVRLLHYYAGWADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229 (393)
Q Consensus 155 ~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlK 229 (393)
.. |+..+++.+++++....+..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 79 ~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~K 157 (453)
T cd07149 79 RK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK 157 (453)
T ss_pred HH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEE
Confidence 85 999999999999988777655443321 233457889999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCC
Q 016216 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGK 309 (393)
Q Consensus 230 ps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~ 309 (393)
||+.+|.++..+.+++.++|+|+|++++++|++.+++..|+.|+++|.|+||||+++|+.|++.++ ++|+++|+|||
T Consensus 158 ps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk 234 (453)
T cd07149 158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSN 234 (453)
T ss_pred CCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC---CCceeeecCCC
Confidence 999999999999999999999999999999977777899999999999999999999999998864 68999999999
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 310 SPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 310 ~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
||+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|+++++.+++|||.++++++|||++.
T Consensus 235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~ 309 (453)
T cd07149 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISE 309 (453)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-61 Score=526.74 Aligned_cols=310 Identities=36% Similarity=0.563 Sum_probs=292.0
Q ss_pred cceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
..+|+|+.. .+..++++||.| ++++++++.++.+++++|++.|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 556 ~~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~--~W~~~~~~~Ra~iL~raAdll~~~~~ 630 (1208)
T PRK11905 556 APLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFP--EWSATPAAERAAILERAADLMEAHMP 630 (1208)
T ss_pred cceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 456677654 356799999999 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
+|+.+++.|+||++.++. .|+..++++++||+..+++..+ ...++|+|||++|+|||||+..++++++
T Consensus 631 eL~~l~~~E~GKt~~ea~-~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~ 698 (1208)
T PRK11905 631 ELFALAVREAGKTLANAI-AEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIA 698 (1208)
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHH
Confidence 999999999999999987 4999999999999998766532 1357899999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 297 (393)
+||++||+||+|||+++|+++..++++|+++|+|+|+||+++|.+.++++.|+.|++|+.|+||||+++|+.|.+.++++
T Consensus 699 aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~ 778 (1208)
T PRK11905 699 AALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKR 778 (1208)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999998872
Q ss_pred --CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 298 --NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 298 --~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
..+|+++|+|||||+||++|||+|+|++.+++++|.++||.|++++++|||+++||+|+++|+++++++++|||.+.+
T Consensus 779 ~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~ 858 (1208)
T PRK11905 779 SGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLS 858 (1208)
T ss_pred cCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhcc
Confidence 248999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||+|++.
T Consensus 859 t~~GPvId~~ 868 (1208)
T PRK11905 859 TDVGPVIDAE 868 (1208)
T ss_pred CCccCccCHH
Confidence 9999999864
|
|
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-61 Score=490.98 Aligned_cols=301 Identities=20% Similarity=0.239 Sum_probs=273.6
Q ss_pred eeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh
Q 016216 76 PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL 155 (393)
Q Consensus 76 ~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 155 (393)
.=+||+||+++++++.++. ++++++|++||+ .|+.+++.+|.++|++++++|+++.++|+++++.|+|||+.+++
T Consensus 68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~--~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~ 142 (551)
T TIGR02288 68 GERSPYGVELGVTYPQCDG---DALLDAAHAALP--GWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAF 142 (551)
T ss_pred cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH
Confidence 4468999999999999986 899999999999 99999999999999999999999999999999999999998874
Q ss_pred h-c---chHHHHHHHHHHHHhhhHhcCccc---cCC-CC---ceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCC
Q 016216 156 K-S---EVPMVVRLLHYYAGWADKIHGLTV---PGD-GN---YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGN 224 (393)
Q Consensus 156 ~-~---Ev~~~~~~l~~~a~~~~~~~~~~~---~~~-~~---~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN 224 (393)
. + ++.+.++.++|+++...++.+... +.. .+ ...+..++|+|||++|+|||||++..++++++||++||
T Consensus 143 e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN 222 (551)
T TIGR02288 143 QAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGN 222 (551)
T ss_pred hccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCC
Confidence 2 2 677889999999998887766543 211 11 12234789999999999999999999999999999999
Q ss_pred EEEEecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCC
Q 016216 225 TIVLKSAEQTPLTAL----YVAKLFHEAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299 (393)
Q Consensus 225 ~VIlKps~~~p~~~~----~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 299 (393)
+||+|||+.+|+++. .+.++|.++|+|+|+||+++|. +.++++.|+.|+.|+.|.||||+++|+.|++.++.
T Consensus 223 ~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~--- 299 (551)
T TIGR02288 223 PVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQ--- 299 (551)
T ss_pred eEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhccc---
Confidence 999999999999665 5679999999999999999985 67789999999999999999999999999998763
Q ss_pred ccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCc---------cHHHHHHHHHHHHhcCccCC
Q 016216 300 KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER---------VYDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 300 ~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~d~f~~~L~~~~~~~~~G~ 370 (393)
+++++|+|||||+||++|||+|.+++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++ +||
T Consensus 300 ~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGd 378 (551)
T TIGR02288 300 AQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGD 378 (551)
T ss_pred CcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence 799999999999999999999999999999999999999999999999999 7999999999999999 999
Q ss_pred CCCCCCccCcccccC
Q 016216 371 PFKSGVEQGPQVLFS 385 (393)
Q Consensus 371 p~~~~~~~Gpli~~~ 385 (393)
|.++++++||||++.
T Consensus 379 p~~~~~~~Gplis~~ 393 (551)
T TIGR02288 379 PARATAVLGAIQSPD 393 (551)
T ss_pred cccccccccCcCCHH
Confidence 999999999999864
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-61 Score=481.59 Aligned_cols=282 Identities=38% Similarity=0.546 Sum_probs=265.9
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHh
Q 016216 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI 176 (393)
Q Consensus 97 v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~ 176 (393)
+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.++|++..+++.
T Consensus 1 v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~ 77 (429)
T cd07100 1 IEAALDRAHAAFL--AWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAF 77 (429)
T ss_pred CHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 4689999999999 999999999999999999999999999999999999999999985 9999999999999998877
Q ss_pred cCc-cccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcE
Q 016216 177 HGL-TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL 255 (393)
Q Consensus 177 ~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v 255 (393)
... ..+.. +...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..|.++|.++|+|+|++
T Consensus 78 ~~~~~~~~~-~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv 156 (429)
T cd07100 78 LADEPIETD-AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVF 156 (429)
T ss_pred cCCeeccCC-CceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcE
Confidence 543 23332 4456789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhcc
Q 016216 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ 335 (393)
Q Consensus 256 ~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~ 335 (393)
|+++|++ +.+..|+.|++++.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+
T Consensus 157 ~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~-~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 157 QNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred EEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-cCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 9999955 467889999999999999999999999999987 88999999999999999999999999999999999999
Q ss_pred CCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 336 GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 336 GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
||.|++++|||||+++||+|+++|+++++++++|||+|+++++||++++
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~ 283 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARK 283 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCH
Confidence 9999999999999999999999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-60 Score=479.65 Aligned_cols=286 Identities=36% Similarity=0.524 Sum_probs=268.4
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhH
Q 016216 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175 (393)
Q Consensus 96 ~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~ 175 (393)
|++++++.|++||+ .|+.+|.++|.++|+++++.|+++.++|++++++|+|||+.++.. |+..+++.+++++....+
T Consensus 1 ~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~ 77 (431)
T cd07095 1 QVDAAVAAARAAFP--GWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHE 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999999999999999999874 999999999999988877
Q ss_pred hcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcE
Q 016216 176 IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVL 255 (393)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v 255 (393)
..+.......+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~ 157 (431)
T cd07095 78 RTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVL 157 (431)
T ss_pred hcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHh
Confidence 66544332335567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhcc
Q 016216 256 NVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ 335 (393)
Q Consensus 256 ~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~ 335 (393)
++++| +.+.+..|++|+++|.|.||||+++|+.|++.++...++++++|+|||||+||++|||+|.|++.+++++|+|+
T Consensus 158 ~~v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 236 (431)
T cd07095 158 NLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTA 236 (431)
T ss_pred eEEeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhC
Confidence 99998 45678999999999999999999999999998876457999999999999999999999999999999999999
Q ss_pred CCCccCCceEEEcCc-cHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 336 GQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 336 GQ~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
||.|++++|+|||++ +||+|+++|+++++++++|||.++++++||++++.
T Consensus 237 GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~ 287 (431)
T cd07095 237 GQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAA 287 (431)
T ss_pred CCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHH
Confidence 999999999999999 99999999999999999999999999999998853
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-60 Score=474.50 Aligned_cols=287 Identities=31% Similarity=0.367 Sum_probs=266.0
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHH
Q 016216 92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171 (393)
Q Consensus 92 ~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 171 (393)
++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++..|+..+++.++||+.
T Consensus 2 ~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 2 TPLDEIDSIHSRLRATFR--SGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 578999999999999999 999999999999999999999999999999999999999998875599999999999999
Q ss_pred hhhHhcCccccCC-----CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 016216 172 WADKIHGLTVPGD-----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246 (393)
Q Consensus 172 ~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~ 246 (393)
..+++.....+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~ 159 (436)
T cd07135 80 NLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP 159 (436)
T ss_pred HHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHH
Confidence 8877543322211 13456889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHH
Q 016216 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326 (393)
Q Consensus 247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~ 326 (393)
+ |+|+|++|+++|.+.+.+ .|+.|+ +|.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|||+|.|++.
T Consensus 160 ~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 160 K-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAK-HLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred H-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHh-cCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 9 699999999998666654 588899 9999999999999999999887 88999999999999999999999999999
Q ss_pred HHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 327 i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+| ++++++||+++..
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~ 293 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPR 293 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHH
Confidence 999999999999999999999999999999999999999999999 8999999998854
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-59 Score=475.67 Aligned_cols=308 Identities=19% Similarity=0.210 Sum_probs=279.5
Q ss_pred CCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcC
Q 016216 69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNG 148 (393)
Q Consensus 69 ~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G 148 (393)
..+++..+++||+|++++++++.+ |+++++++|++||+ .|+.+++++|.++|++++++|.+++++|++++++|+|
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~--~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~G 135 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMP--GWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG 135 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHC
Confidence 346788999999999999999887 99999999999999 9999999999999999999999999999999999999
Q ss_pred CChhhhhh----cchHHHHHHHHHHHHhhhHhcCccccC---C----CCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 149 KPYVQSLK----SEVPMVVRLLHYYAGWADKIHGLTVPG---D----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 149 k~~~~a~~----~Ev~~~~~~l~~~a~~~~~~~~~~~~~---~----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
|++.++.. .|+..+++.++|+++...++.+...+. . ........++|+||+++|+|||||++..+.+++
T Consensus 136 k~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~ 215 (549)
T cd07127 136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLF 215 (549)
T ss_pred CCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHH
Confidence 99977753 279999999999999888775543211 0 011224478999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 218 PALTCGNTIVLKSAEQTPLTAL----YVAKLFHEAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~----~l~~ll~~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
+||++||+||+|||+.+|+++. .+.++|.++|+|+|+||++++. +.++++.|+.|+.|+.|.||||+.+|+.|.+
T Consensus 216 ~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~ 295 (549)
T cd07127 216 ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEA 295 (549)
T ss_pred HHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999998764 4668999999999999999985 4678999999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCc---------cHHHHHHHHHHHH
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER---------VYDEFVEKAKARA 363 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~d~f~~~L~~~~ 363 (393)
.++. +|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++ +||+|+++|++++
T Consensus 296 ~a~~---~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~ 372 (549)
T cd07127 296 NARQ---AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAI 372 (549)
T ss_pred Hhcc---CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHH
Confidence 9864 799999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred hcCccCCCCCCCCccCcccccC
Q 016216 364 MRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 364 ~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+++ +|||.+..+++||||++.
T Consensus 373 ~~l-~Gdp~~~~~~~Gpli~~~ 393 (549)
T cd07127 373 DGL-LADPARAAALLGAIQSPD 393 (549)
T ss_pred HHh-cCCccccccccCCcCCHH
Confidence 999 999999999999999863
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-59 Score=468.60 Aligned_cols=280 Identities=31% Similarity=0.397 Sum_probs=259.6
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcC
Q 016216 99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178 (393)
Q Consensus 99 ~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 178 (393)
+.+++|++||+ .|+.++..+|.++|.++++.|+++.++|++++++|+|||+.+++..|+..+++.++|++...+++.+
T Consensus 2 ~~v~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (449)
T cd07136 2 SLVEKQRAFFK--TGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMK 79 (449)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56889999999 9999999999999999999999999999999999999999998756999999999999998877654
Q ss_pred c-cccCC---CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 016216 179 L-TVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV 254 (393)
Q Consensus 179 ~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~ 254 (393)
. ..+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv 158 (449)
T cd07136 80 PKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEY 158 (449)
T ss_pred CCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCE
Confidence 3 22211 2345688999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhc
Q 016216 255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN 334 (393)
Q Consensus 255 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~ 334 (393)
+|+++| +.+.+..|+.|+ |+.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 159 ~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~-~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 159 VAVVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAK-HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred EEEEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 999998 556788888765 9999999999999999999887 8899999999999999999999999999999999999
Q ss_pred cCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 335 ~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+||.|++++|+|||+++||+|+++|+++++++++|||.+ ++++||++++.
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~ 285 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEK 285 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHH
Confidence 999999999999999999999999999999999999998 88999998753
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-59 Score=470.46 Aligned_cols=288 Identities=27% Similarity=0.347 Sum_probs=266.8
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHH
Q 016216 91 EGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA 170 (393)
Q Consensus 91 ~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a 170 (393)
+++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|+++++.|+|||+.++...|+..+++.++|++
T Consensus 2 ~~~~~~v~~av~~a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~ 79 (484)
T PLN02203 2 EAPGETLEGSVAELRETYE--SGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLAL 79 (484)
T ss_pred CCCHHHHHHHHHHHHHHHH--hcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999 99999999999999999999999999999999999999999986569999999999999
Q ss_pred HhhhHhcCcc---ccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 016216 171 GWADKIHGLT---VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246 (393)
Q Consensus 171 ~~~~~~~~~~---~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~ 246 (393)
+..++..+.. .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~ 159 (484)
T PLN02203 80 SNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIP 159 (484)
T ss_pred HHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHH
Confidence 8887765431 221 123456889999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcC---CCCHHHH
Q 016216 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD---DADVDQA 323 (393)
Q Consensus 247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~---dADld~a 323 (393)
++ +|+|+||+++| +.++++.|..| .+|.|+||||+++|+.|++.+++ +++|+++|+|||||+||++ |||+|.|
T Consensus 160 ~~-lP~gvv~vv~g-~~~~~~~l~~~-~vd~v~fTGS~~~G~~v~~~aa~-~l~~v~lElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 160 KY-LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAAK-HLTPVALELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred Hh-CCcCEEEEEeC-CHHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHh-cCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence 96 99999999998 77889999999 59999999999999999999987 8999999999999999997 6999999
Q ss_pred HHHHHHHHHh-ccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 324 VELAHFALFY-NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 324 ~~~i~~~~~~-~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++.+++++|. |+||.|++++|+|||++++|+|+++|+++++++++|||.++ +++||++++.
T Consensus 236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~ 297 (484)
T PLN02203 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKK 297 (484)
T ss_pred HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHH
Confidence 9999999996 89999999999999999999999999999999999999986 6899999854
|
|
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-59 Score=468.05 Aligned_cols=285 Identities=44% Similarity=0.673 Sum_probs=269.1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhH
Q 016216 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175 (393)
Q Consensus 96 ~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~ 175 (393)
|++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|+++++.|+||+..++.. |+..+++.+++++...++
T Consensus 1 ~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~ 77 (431)
T cd07104 1 DVDRAYAAAAAAQK--AWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRR 77 (431)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999999999999999998875 999999999999998877
Q ss_pred hcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHH-HHHHHHHHHHcCCCCC
Q 016216 176 IHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT-ALYVAKLFHEAGLPPG 253 (393)
Q Consensus 176 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~-~~~l~~ll~~aGlP~g 253 (393)
..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~g 157 (431)
T cd07104 78 PEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKG 157 (431)
T ss_pred hcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcc
Confidence 665544433 45567889999999999999999999999999999999999999999999988 6789999999999999
Q ss_pred cEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHh
Q 016216 254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFY 333 (393)
Q Consensus 254 ~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~ 333 (393)
++++++|++.+.++.|+.|++++.|.||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+++++|.
T Consensus 158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 236 (431)
T cd07104 158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236 (431)
T ss_pred cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhh-cCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 9999999777789999999999999999999999999999987 899999999999999999999999999999999999
Q ss_pred ccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 334 NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 334 ~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
|+||.|+++++||||++++|+|+++|+++++.+++|||.++++.+||++++
T Consensus 237 ~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~ 287 (431)
T cd07104 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINE 287 (431)
T ss_pred cCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCH
Confidence 999999999999999999999999999999999999999999999999874
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-58 Score=466.04 Aligned_cols=287 Identities=29% Similarity=0.375 Sum_probs=265.1
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHH
Q 016216 92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171 (393)
Q Consensus 92 ~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 171 (393)
.+.+|++++++.|+++|+ .|+.++.++|.++|+++++.|++|.++|++++++|+|||..++...|+..+++.++++++
T Consensus 4 ~~~~~i~~av~~a~~a~~--~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~ 81 (493)
T PTZ00381 4 DNPEIIPPIVKKLKESFL--TGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLK 81 (493)
T ss_pred CCHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999 999999999999999999999999999999999999999998877799999999999998
Q ss_pred hhhHhcCcc-ccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 016216 172 WADKIHGLT-VPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE 247 (393)
Q Consensus 172 ~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~ 247 (393)
..+++.... ... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~ 161 (493)
T PTZ00381 82 HLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTK 161 (493)
T ss_pred HHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 877664332 111 1233578899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHH
Q 016216 248 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELA 327 (393)
Q Consensus 248 aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i 327 (393)
+ +|+|++++++| +.+.+..|+.|+ +|.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||++.|++.+
T Consensus 162 ~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~-~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i 237 (493)
T PTZ00381 162 Y-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAE-NLTPCTLELGGKSPVIVDKSCNLKVAARRI 237 (493)
T ss_pred h-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHh-cCCcEEEEcCCCCceEEcCCCCHHHHHHHH
Confidence 6 99999999998 667888899887 9999999999999999999987 899999999999999999999999999999
Q ss_pred HHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 328 HFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 328 ~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++++|.|+||.|++++++|||++++|+|+++|++.+++++ |+|.++++++||+|+..
T Consensus 238 ~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~ 294 (493)
T PTZ00381 238 AWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEF 294 (493)
T ss_pred HHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHH
Confidence 9999999999999999999999999999999999999986 66667889999999854
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-58 Score=461.69 Aligned_cols=281 Identities=42% Similarity=0.630 Sum_probs=261.5
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhH
Q 016216 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175 (393)
Q Consensus 96 ~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~ 175 (393)
|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++. |+..+++.++|+++..++
T Consensus 1 ~v~~ai~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~ 77 (432)
T cd07105 1 DADQAVEAAAAAFP--AWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQ 77 (432)
T ss_pred CHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999999999999999877764 999999999999998877
Q ss_pred hcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 016216 176 IHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV 254 (393)
Q Consensus 176 ~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~ 254 (393)
..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv 157 (432)
T cd07105 78 IIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV 157 (432)
T ss_pred hcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCc
Confidence 644444432 3445678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCC---chhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHH
Q 016216 255 LNVVSGY---GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL 331 (393)
Q Consensus 255 v~vv~g~---~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~ 331 (393)
+|+++|. +.++++.|+.|++++.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus 158 ~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 158 LNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAK-HLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred EEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh-cCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999974 34578999999999999999999999999999987 8899999999999999999999999999999999
Q ss_pred HhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 332 ~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|+|+||.|++++++|||+++||+|+++|+++++++++| ++++||++++.
T Consensus 237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~ 285 (432)
T cd07105 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAA 285 (432)
T ss_pred HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHH
Confidence 99999999999999999999999999999999999999 57899998753
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-57 Score=457.02 Aligned_cols=280 Identities=30% Similarity=0.382 Sum_probs=257.0
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcC
Q 016216 99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178 (393)
Q Consensus 99 ~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 178 (393)
+++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.++|++....+..+
T Consensus 3 ~a~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 80 (432)
T cd07137 3 RLVRELRETFR--SGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMA 80 (432)
T ss_pred HHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48899999999 9999999999999999999999999999999999999999887656999999999999988766443
Q ss_pred cc---ccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 016216 179 LT---VPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV 254 (393)
Q Consensus 179 ~~---~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~ 254 (393)
.. .+. ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gv 159 (432)
T cd07137 81 PEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKA 159 (432)
T ss_pred CcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 31 111 12234678899999999999999999999999999999999999999999999999999999995 99999
Q ss_pred EEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-h
Q 016216 255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF-Y 333 (393)
Q Consensus 255 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~-~ 333 (393)
+|+++| +.+.+..|+.| .++.|.||||+++|+.|.+.+++ ++||+++|+|||||+||++|||+|.|++.+++++| +
T Consensus 160 v~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~-~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 160 IKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAK-HLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred EEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 999999 55678889887 69999999999999999999887 88999999999999999999999999999999999 5
Q ss_pred ccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 334 NQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 334 ~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|+||.|++++|+|||+++||+|+++|+++++++++|||. +++++||+++++
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~ 287 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPK-ESKDLSRIVNSH 287 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCC-ccCCcCCcCCHH
Confidence 999999999999999999999999999999999999994 588999999853
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-57 Score=449.85 Aligned_cols=259 Identities=37% Similarity=0.592 Sum_probs=243.8
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEEC
Q 016216 125 MLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIV 203 (393)
Q Consensus 125 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 203 (393)
|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++|++.+++...+...+.. .+...+..++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 5789999999999999999999999999998 4999999999999999887766543322 2345788899999999999
Q ss_pred CCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCC
Q 016216 204 PWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGH 283 (393)
Q Consensus 204 p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs 283 (393)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.+..|..|++++.|+||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred hHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHH
Q 016216 284 CDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA 363 (393)
Q Consensus 284 ~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~ 363 (393)
+.+|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++
T Consensus 160 ~~~g~~v~~~aa~-~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAAK-NITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHHh-cCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 9999999999887 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCccCCCCCC-CCccCcccccC
Q 016216 364 MRRIVGDPFKS-GVEQGPQVLFS 385 (393)
Q Consensus 364 ~~~~~G~p~~~-~~~~Gpli~~~ 385 (393)
+++++|||+++ ++++|||+++.
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~ 261 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAA 261 (409)
T ss_pred HhcCCCCCCCcccCccccccCHH
Confidence 99999999998 99999999864
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-56 Score=451.73 Aligned_cols=280 Identities=29% Similarity=0.351 Sum_probs=256.8
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcC
Q 016216 99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178 (393)
Q Consensus 99 ~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 178 (393)
+++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.++...|+..+++.++++++..+++..
T Consensus 2 ~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~ 79 (443)
T cd07132 2 EAVRRAREAFS--SGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMK 79 (443)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 58899999999 9999999999999999999999999999999999999999988766999999999999988877643
Q ss_pred ccccC----CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 016216 179 LTVPG----DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV 254 (393)
Q Consensus 179 ~~~~~----~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~ 254 (393)
...+. ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv 158 (443)
T cd07132 80 PEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKEC 158 (443)
T ss_pred CccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCe
Confidence 32211 12245788899999999999999999999999999999999999999999999999999999985 99999
Q ss_pred EEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhc
Q 016216 255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN 334 (393)
Q Consensus 255 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~ 334 (393)
+|+++|++.+ +..|+. ++||.|.||||+++|+.|.+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 159 ~~vv~g~~~~-~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~-~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 159 YPVVLGGVEE-TTELLK-QRFDYIFYTGSTSVGKIVMQAAAK-HLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred EEEEeCCHHH-HHHHHh-CCCCEEEEECChHHHHHHHHHHHh-hCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 9999995444 556775 589999999999999999999887 8899999999999999999999999999999999999
Q ss_pred cCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 335 ~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+||.|++++|+|||+++||+|+++|++++++++.||| ++++++||++++.
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~ 285 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDR 285 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHH
Confidence 9999999999999999999999999999999999999 6889999999863
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-57 Score=441.69 Aligned_cols=312 Identities=36% Similarity=0.559 Sum_probs=293.5
Q ss_pred cceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.-+++|+.+. .|+..+++||.+ .+++++|.+++.+|+++|++.|..++. .|..+|+.+|..+|+|++|+|+.+..
T Consensus 115 ~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p--~W~atp~~eRAaiL~raAdlme~~m~ 190 (769)
T COG4230 115 APIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAP--IWSATPPAERAAILERAADLMEAQMP 190 (769)
T ss_pred ccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCc--ccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4467787764 688999999998 568899999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
+|..++++|.||+...+.. |+.+++++||||+.+++.-.+. ..+.|+|++.+|+|||||+.++..+++
T Consensus 191 ~L~~L~~REAGKtl~naIA-EVREAVDFlrYYA~~ar~~~g~-----------~~~~~~G~vVcISPWNFPLAIFtGqia 258 (769)
T COG4230 191 QLMGLLVREAGKTLSNAIA-EVREAVDFLRYYAGQARDTFGN-----------LTHRPLGPVVCISPWNFPLAIFTGQIA 258 (769)
T ss_pred HHHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhcccCc-----------cccCCCCcEEEECCCCchHHHHHhHHH
Confidence 9999999999999999885 9999999999999988753221 347899999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 297 (393)
.||++||+|+-||.++||+.+..-+++++++|+|++++++++|+|.++|..|+.++++++|+|||||++++.|.+..+++
T Consensus 259 AAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r 338 (769)
T COG4230 259 AALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKR 338 (769)
T ss_pred HHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CC--ccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 298 NL--KPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 298 ~~--~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+. .|++.|.||.|++||+.+|--|+++..++.|+|..+||+|++.+.+|+++++.|..++.|+..+..+++|+|..-.
T Consensus 339 ~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~ 418 (769)
T COG4230 339 QGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLT 418 (769)
T ss_pred CCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCcccee
Confidence 54 6889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccCC
Q 016216 376 VEQGPQVLFSA 386 (393)
Q Consensus 376 ~~~Gpli~~~~ 386 (393)
||+||+|+.-+
T Consensus 419 tDVGPVIdaEA 429 (769)
T COG4230 419 TDVGPVIDAEA 429 (769)
T ss_pred ccccccccHHH
Confidence 99999998643
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-56 Score=446.78 Aligned_cols=278 Identities=32% Similarity=0.388 Sum_probs=253.4
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCC-hhhhhhcchHHHHHHHHHHHHhhhHhcC
Q 016216 100 AVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP-YVQSLKSEVPMVVRLLHYYAGWADKIHG 178 (393)
Q Consensus 100 av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 178 (393)
.+++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+||+ ..++...|+..+++.++|++....+...
T Consensus 3 ~~~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 80 (434)
T cd07133 3 LLERQKAAFL--ANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMK 80 (434)
T ss_pred HHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5778999999 999999999999999999999999999999999999985 5566556999999999999988876544
Q ss_pred ccc-cCC---CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 016216 179 LTV-PGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV 254 (393)
Q Consensus 179 ~~~-~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~ 254 (393)
... ... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++++++ +|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~ 159 (434)
T cd07133 81 PSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDE 159 (434)
T ss_pred CcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCe
Confidence 332 111 2345688999999999999999999999999999999999999999999999999999999997 99999
Q ss_pred EEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhc
Q 016216 255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN 334 (393)
Q Consensus 255 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~ 334 (393)
||+++| +.+.++.|..|+ +|.|+||||+++|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|+|
T Consensus 160 ~~~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~-~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 160 VAVVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred EEEEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHh-cCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 999998 556788888765 9999999999999999999887 8999999999999999999999999999999999999
Q ss_pred cCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 335 ~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+||.|++++|+|||++++|+|+++|+++++++++|+ ++++++||++++.
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~ 285 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINER 285 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHH
Confidence 999999999999999999999999999999999997 4678999999753
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-56 Score=445.50 Aligned_cols=281 Identities=32% Similarity=0.345 Sum_probs=259.2
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcC
Q 016216 99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178 (393)
Q Consensus 99 ~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 178 (393)
+++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.+++..|+..+++.+++++....+...
T Consensus 2 ~~~~~a~~a~~--~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~ 79 (433)
T cd07134 2 RVFAAQQAHAL--ALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMK 79 (433)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57889999999 9999999999999999999999999999999999999999988656999999999999987655433
Q ss_pred c-cccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 016216 179 L-TVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV 254 (393)
Q Consensus 179 ~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~ 254 (393)
. ..+. ..+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~ 158 (433)
T cd07134 80 PKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDE 158 (433)
T ss_pred CcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCE
Confidence 2 1211 12445789999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhc
Q 016216 255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN 334 (393)
Q Consensus 255 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~ 334 (393)
+++++| +.+.+..|++|+ ++.|.||||+.+|+.|++.+++ +++|+++|+||+||+||++|||++.|++.+++++|++
T Consensus 159 v~~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~-~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 159 VAVFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAK-HLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred EEEEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHh-cCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 999999 456888999987 9999999999999999999887 7899999999999999999999999999999999999
Q ss_pred cCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC-CCCCCccCcccccC
Q 016216 335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP-FKSGVEQGPQVLFS 385 (393)
Q Consensus 335 ~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p-~~~~~~~Gpli~~~ 385 (393)
+||.|++++++|||+++||+|+++|+++++.++.|+| .+.++++||++++.
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~ 287 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDR 287 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHH
Confidence 9999999999999999999999999999999998997 88899999998754
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-56 Score=444.40 Aligned_cols=279 Identities=33% Similarity=0.406 Sum_probs=256.1
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcC
Q 016216 99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178 (393)
Q Consensus 99 ~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~ 178 (393)
+++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++...++..+
T Consensus 2 ~~v~~a~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~ 79 (426)
T cd07087 2 ELVARLRETFL--TGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMK 79 (426)
T ss_pred hHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 48899999999 9999999999999999999999999999999999999998777656999999999999988776543
Q ss_pred cc-c--cC-CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCc
Q 016216 179 LT-V--PG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGV 254 (393)
Q Consensus 179 ~~-~--~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~ 254 (393)
.. . +. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.+ |+|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv 158 (426)
T cd07087 80 PRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEA 158 (426)
T ss_pred CcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCE
Confidence 22 1 11 1234568889999999999999999999999999999999999999999999999999999999 699999
Q ss_pred EEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhc
Q 016216 255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYN 334 (393)
Q Consensus 255 v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~ 334 (393)
+|+++|+ .+.+..|+.|+ ++.|.||||+++|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 159 ~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 159 VAVVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAK-HLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred EEEEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHh-hCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 9999984 45688899998 9999999999999999999887 8899999999999999999999999999999999999
Q ss_pred cCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 335 QGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 335 ~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
+||.|++++++|||++++|+|+++|++.+++++.|+|. +++++||++++
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~-~~~~~gpli~~ 284 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPK-ESPDYGRIINE 284 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCc-cCCCcCCCCCH
Confidence 99999999999999999999999999999999877775 68899999975
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-56 Score=446.61 Aligned_cols=280 Identities=23% Similarity=0.287 Sum_probs=250.5
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHH-HHHHHHHhhhH
Q 016216 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVR-LLHYYAGWADK 175 (393)
Q Consensus 97 v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~-~l~~~a~~~~~ 175 (393)
++.++++|++||+ .|+.+|.++|.++|+++++.|+++.++|+++++.|+|||+.+++..|+..+++ .+++++.. +
T Consensus 1 ~~~av~~A~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~ 76 (436)
T cd07122 1 VDELVERARKAQR--EFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--K 76 (436)
T ss_pred ChHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--c
Confidence 4789999999999 99999999999999999999999999999999999999998887557777777 78888753 2
Q ss_pred hcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCCC
Q 016216 176 IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGLP 251 (393)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~----~aGlP 251 (393)
..+.. ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++. ++|+|
T Consensus 77 ~~g~~-~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P 155 (436)
T cd07122 77 TVGVI-EEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAP 155 (436)
T ss_pred ceeee-ccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCC
Confidence 22221 22223456788999999999999999999999999999999999999999999999999888865 78999
Q ss_pred CCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHH
Q 016216 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFAL 331 (393)
Q Consensus 252 ~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~ 331 (393)
+|++|+++|.+.+.++.|.+|++|+.|.||||+++++ .+++ +++|+++|+|||||+||++|||+|.|++.+++++
T Consensus 156 ~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~-~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~ 230 (436)
T cd07122 156 EGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYS-SGKPAIGVGPGNVPAYIDETADIKRAVKDIILSK 230 (436)
T ss_pred chhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHh-cCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHh
Confidence 9999999987777899999999999999999999754 3444 7899999999999999999999999999999999
Q ss_pred HhccCCCccCCceEEEcCccHHHHHHHHHHHHhcC-------ccCCC-CCCCCccCcccccCC
Q 016216 332 FYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR-------IVGDP-FKSGVEQGPQVLFSA 386 (393)
Q Consensus 332 ~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~-------~~G~p-~~~~~~~Gpli~~~~ 386 (393)
|+|+||.|++++|+|||+++||+|+++|+++...+ ++|++ .+.++++||+++.+.
T Consensus 231 f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~ 293 (436)
T cd07122 231 TFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKS 293 (436)
T ss_pred hccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcC
Confidence 99999999999999999999999999999999887 89999 467889999997653
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-55 Score=440.19 Aligned_cols=256 Identities=23% Similarity=0.249 Sum_probs=225.9
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHH--HHHHHHHhhh
Q 016216 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVR--LLHYYAGWAD 174 (393)
Q Consensus 97 v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~--~l~~~a~~~~ 174 (393)
+++|+++|++||+ .|+.+|+++|.++|+++++.|++|+++|+++++.|+|||+.+++. ++..... ..++++.
T Consensus 1 ~~~Ai~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~--- 74 (439)
T cd07081 1 LDDAVAAAKVAQQ--GLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD--- 74 (439)
T ss_pred CHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---
Confidence 4689999999999 999999999999999999999999999999999999999988874 5544443 2333332
Q ss_pred HhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCC
Q 016216 175 KIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGL 250 (393)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~----~aGl 250 (393)
...+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~ 154 (439)
T cd07081 75 EKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGA 154 (439)
T ss_pred cccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCC
Confidence 122222333223446789999999999999999999999999999999999999999999999988888875 6799
Q ss_pred CCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Q 016216 251 PPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFA 330 (393)
Q Consensus 251 P~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~ 330 (393)
|+|+||+++|.+.+.++.|+.|++|++|.||||++ +.+.+++ ++||+++|+|||+|+||++|||+|.|++.++++
T Consensus 155 P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~ 229 (439)
T cd07081 155 PENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229 (439)
T ss_pred ChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999987778899999999999999999987 4556665 789999999999999999999999999999999
Q ss_pred HHhccCCCccCCceEEEcCccHHHHHHHHHHHH
Q 016216 331 LFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA 363 (393)
Q Consensus 331 ~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~ 363 (393)
+|+|+||.|++.+|+|||+++||+|+++|.+++
T Consensus 230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 262 (439)
T cd07081 230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG 262 (439)
T ss_pred HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999976
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-54 Score=439.80 Aligned_cols=286 Identities=18% Similarity=0.176 Sum_probs=249.7
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHH
Q 016216 91 EGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA 170 (393)
Q Consensus 91 ~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a 170 (393)
..+.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++..|+|||..+.+..+.......+.+++
T Consensus 4 ~~~~~~v~~av~~A~~A~~--~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~ 81 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQK--KLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSI 81 (488)
T ss_pred ccCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 3577899999999999999 99999999999999999999999999999999999999987755322334555555554
Q ss_pred HhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHH----HHHHH
Q 016216 171 GWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV----AKLFH 246 (393)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l----~~ll~ 246 (393)
...+. .+ ....+.+...+..++|+|||++|+|||||+....+++++||++||+||+|||+.+|.++..+ .+++.
T Consensus 82 ~~~~~-~G-~~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~ 159 (488)
T TIGR02518 82 KDMKT-IG-ILSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAE 159 (488)
T ss_pred hhCcc-cc-eecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence 43322 22 22223345567889999999999999999999999999999999999999999999999985 45558
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHH
Q 016216 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVEL 326 (393)
Q Consensus 247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~ 326 (393)
++|+|+|+||++++.+.+.+..|+.|++||+|.||||+.+++. +.. .+||+++|+|||+|+||++|||+|.|++.
T Consensus 160 eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~-~~~pv~~e~gGn~p~iV~~dADld~Aa~~ 234 (488)
T TIGR02518 160 EAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYS-SGTPAIGVGPGNGPAYIERTANVKKAVRD 234 (488)
T ss_pred HcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHH-cCCCEEEEcCCCCeEEEeCCCCHHHHHHH
Confidence 9999999999999877788999999999999999999986543 333 67999999999999999999999999999
Q ss_pred HHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHH-------HhcCccCCC-CCCCCccCcccccC
Q 016216 327 AHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKAR-------AMRRIVGDP-FKSGVEQGPQVLFS 385 (393)
Q Consensus 327 i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~-------~~~~~~G~p-~~~~~~~Gpli~~~ 385 (393)
+++++|+|+||.|++.+|+|||+++||+|+++|+++ .+.+++|+| +++++++||+++.+
T Consensus 235 iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~ 301 (488)
T TIGR02518 235 IIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGK 301 (488)
T ss_pred HHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccc
Confidence 999999999999999999999999999999999998 899999996 67889999999653
|
|
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-54 Score=434.87 Aligned_cols=274 Identities=24% Similarity=0.235 Sum_probs=251.9
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhc
Q 016216 98 DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177 (393)
Q Consensus 98 ~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~ 177 (393)
++|++.|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||. +.. .|+..+++.++||+.......
T Consensus 2 ~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~ 77 (442)
T cd07084 2 ERALLAADISTK--AARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYR 77 (442)
T ss_pred hHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcc
Confidence 579999999999 9999999999999999999999999999999999999999 555 599999999999998876532
Q ss_pred --Cccc---cCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCC-C
Q 016216 178 --GLTV---PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL-P 251 (393)
Q Consensus 178 --~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGl-P 251 (393)
+... +.......+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++++++|+ |
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P 157 (442)
T cd07084 78 IPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLP 157 (442)
T ss_pred ccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCC
Confidence 2111 111134568899999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCC-CHHHHHHHHHHH
Q 016216 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA-DVDQAVELAHFA 330 (393)
Q Consensus 252 ~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dA-Dld~a~~~i~~~ 330 (393)
+|++++++|++. .+..|+.|++++.|+||||+++|+.|++.++. +|+++|+|||||+||++|| |+|.+++.++++
T Consensus 158 ~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~ 233 (442)
T cd07084 158 PEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQD 233 (442)
T ss_pred ccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHH
Confidence 999999999665 88999999999999999999999999998764 8999999999999999999 699999999999
Q ss_pred HHhccCCCccCCceEEEcCc-cHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 331 LFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 331 ~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
+|.|+||.|++++|+|||++ ++|+|+++|++.++++++| ++.+||++++
T Consensus 234 ~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~ 283 (442)
T cd07084 234 MTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF 283 (442)
T ss_pred HhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH
Confidence 99999999999999999999 9999999999999999999 6789998765
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-55 Score=417.70 Aligned_cols=302 Identities=41% Similarity=0.770 Sum_probs=283.1
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
+.||+|+|+++.++++++++||.||.+|++++.++..|+++|+.+|+.||+.|.|.+++..+|.+.|.++++++++|+++
T Consensus 423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ee 502 (881)
T KOG2452|consen 423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEE 502 (881)
T ss_pred hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccch
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC----CCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
|+.+.+++.|.-+.-+...-+...++.+|||++|.+++.+.++|.. ....+.+.++|+|||++|+|||||+.++.|
T Consensus 503 lat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlsw 582 (881)
T KOG2452|consen 503 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW 582 (881)
T ss_pred hhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHH
Confidence 9999999999887777777888999999999999999999998854 234567899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
+.+.+|++- ...++++ .|++|+++|+|+-++..|..||+++.|-||||+++|+.|++.+
T Consensus 583 k~aaclaa~--------------~~k~~e~-------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc 641 (881)
T KOG2452|consen 583 KTAACLAAQ--------------VLKFAEL-------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 641 (881)
T ss_pred HHHHHHHHH--------------Hhhhhhh-------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence 999999642 1112221 4789999999999999999999999999999999999999999
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
+.++.|+|.+|+||++|+||+.|+|+++|+.....+.|+|.|..|++..|+||.+++.|+|++++.+.++++++|||+|.
T Consensus 642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr 721 (881)
T KOG2452|consen 642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDR 721 (881)
T ss_pred hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcc
Q 016216 375 GVEQGPQ 381 (393)
Q Consensus 375 ~~~~Gpl 381 (393)
+|+-||+
T Consensus 722 ~t~hgpq 728 (881)
T KOG2452|consen 722 DTDHGPQ 728 (881)
T ss_pred cccCCch
Confidence 9999997
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-53 Score=431.07 Aligned_cols=271 Identities=25% Similarity=0.324 Sum_probs=245.6
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHh
Q 016216 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI 176 (393)
Q Consensus 97 v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~ 176 (393)
+++|++.|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++. .|+..+++.+++++...++.
T Consensus 1 v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~ 77 (454)
T cd07129 1 VDAAAAAAAAAFE--SYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREG 77 (454)
T ss_pred ChHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 4789999999999 99999999999999999999999999999999999999998887 59999999999999877643
Q ss_pred c--CccccC-------CCCceEEEEEecceeEEEECCCCccHHH--HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHH
Q 016216 177 H--GLTVPG-------DGNYHIQTLHEPIGVAGQIVPWNFPLLL--FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLF 245 (393)
Q Consensus 177 ~--~~~~~~-------~~~~~~~~~~~P~Gvv~~i~p~N~P~~~--~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll 245 (393)
. +..... ..+...+.+++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++.++.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~ 157 (454)
T cd07129 78 SWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAI 157 (454)
T ss_pred CCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHH
Confidence 2 221110 0122357889999999999999999987 4589999999999999999999999999998876
Q ss_pred H----HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc-CCccEEEecCCCCeEEEcCCC--
Q 016216 246 H----EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS-NLKPVTLELGGKSPFIIFDDA-- 318 (393)
Q Consensus 246 ~----~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~-~~~pv~lelgG~~~~iV~~dA-- 318 (393)
. ++|+|+|+||+++|++.+.++.|+.|++|+.|+||||+.+|+.|++.++++ ++||+++|+|||||+||++||
T Consensus 158 ~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~ 237 (454)
T cd07129 158 RAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA 237 (454)
T ss_pred HHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence 4 889999999999997767899999999999999999999999999998863 589999999999999999999
Q ss_pred -CHHHHHHHHHHHHHhccCCCccCCceEEEcCc-cHHHHHHHHHHHHhcCccCC
Q 016216 319 -DVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 319 -Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~G~ 370 (393)
|+|.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|+++++++++|.
T Consensus 238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g~ 291 (454)
T cd07129 238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQT 291 (454)
T ss_pred HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCCC
Confidence 89999999999999999999999999999999 99999999999999998873
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-53 Score=424.74 Aligned_cols=251 Identities=22% Similarity=0.256 Sum_probs=225.3
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhh
Q 016216 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174 (393)
Q Consensus 95 ~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~ 174 (393)
+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++. ++.+++++....
T Consensus 4 ~~v~~av~~A~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~ 74 (429)
T cd07121 4 ATVDDAVAAAKAAQK--QYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTP 74 (429)
T ss_pred hhHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcC
Confidence 689999999999999 99999999999999999999999999999999999999986543 445666654221
Q ss_pred HhcCcc-c-c---CCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH---
Q 016216 175 KIHGLT-V-P---GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH--- 246 (393)
Q Consensus 175 ~~~~~~-~-~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~--- 246 (393)
+.. . + ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++++
T Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~ 151 (429)
T cd07121 75 ---GTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAI 151 (429)
T ss_pred ---cccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHH
Confidence 111 1 1 1112335778899999999999999999999999999999999999999999999999999874
Q ss_pred -HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHH
Q 016216 247 -EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVE 325 (393)
Q Consensus 247 -~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~ 325 (393)
++|+|+|++|+++|.+.+.++.|++|++||.|+||||+.+|+.|++. .||+++|+|||||+||++|||+|.|++
T Consensus 152 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~ 226 (429)
T cd07121 152 AEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAAR 226 (429)
T ss_pred HHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHH
Confidence 78999999999998777788999999999999999999999999874 489999999999999999999999999
Q ss_pred HHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHH
Q 016216 326 LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKAR 362 (393)
Q Consensus 326 ~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~ 362 (393)
.+++++|+|+||.|++++|+|||+++||+|+++|++.
T Consensus 227 ~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~ 263 (429)
T cd07121 227 DIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN 263 (429)
T ss_pred HHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC
Confidence 9999999999999999999999999999999999887
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-52 Score=420.85 Aligned_cols=283 Identities=54% Similarity=0.847 Sum_probs=266.2
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhc
Q 016216 98 DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177 (393)
Q Consensus 98 ~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~ 177 (393)
+++++.|++|++ .|+.++.++|.++|+++++.|.++.++|+++++.|+||++.+++ .|+..+++.+++++...+++.
T Consensus 1 ~~av~~a~~a~~--~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~ 77 (432)
T cd07078 1 DAAVAAARAAFK--AWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLH 77 (432)
T ss_pred CHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 368899999999 99999999999999999999999999999999999999988776 499999999999998888765
Q ss_pred Cccc-cCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEE
Q 016216 178 GLTV-PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLN 256 (393)
Q Consensus 178 ~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~ 256 (393)
+... +...+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~ 157 (432)
T cd07078 78 GEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLN 157 (432)
T ss_pred CccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEE
Confidence 5442 233456778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccC
Q 016216 257 VVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336 (393)
Q Consensus 257 vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~G 336 (393)
+++|++.+.+..|..|++++.|.||||..+++.|.+.+++ +++|+++|+||++++||++|+|++.+++.+++++|.++|
T Consensus 158 ~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~-~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G 236 (432)
T cd07078 158 VVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236 (432)
T ss_pred EEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh-ccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence 9999766688999999999999999999999999999997 789999999999999999999999999999999999999
Q ss_pred CCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 337 QCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 337 Q~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
|.|++++++|||++++|+|+++|+++++++++|+|+|+++++||++++
T Consensus 237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~ 284 (432)
T cd07078 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISA 284 (432)
T ss_pred CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999999999875
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-53 Score=424.27 Aligned_cols=256 Identities=21% Similarity=0.212 Sum_probs=227.5
Q ss_pred cCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHH
Q 016216 91 EGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA 170 (393)
Q Consensus 91 ~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a 170 (393)
....+|++++++.|++||. .|+.++.++|.++|+++++.|+++.++|+++++.|+||++.+++. ..+++++
T Consensus 32 ~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~ 102 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQ--RYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAA 102 (465)
T ss_pred ccHHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHH
Confidence 3467899999999999999 999999999999999999999999999999999999999877642 3345555
Q ss_pred HhhhHh---cCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 016216 171 GWADKI---HGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH- 246 (393)
Q Consensus 171 ~~~~~~---~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~- 246 (393)
...... ....... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.
T Consensus 103 ~~~~~~~~~~~~~~~~-~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 103 EKTPGVEDLTTEALTG-DNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred HHhccccccccCcccC-CCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 443211 1111111 22345778899999999999999999999999999999999999999999999999999876
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHH
Q 016216 247 ---EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA 323 (393)
Q Consensus 247 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a 323 (393)
++|+|+|++++++|.+.+.++.|++|++||.|+||||+++|+.|++ .++|+++|+|||||+||++|||+|.|
T Consensus 182 ~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 182 AIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHH
Confidence 6899999999999876778899999999999999999999999988 24899999999999999999999999
Q ss_pred HHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHH
Q 016216 324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361 (393)
Q Consensus 324 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~ 361 (393)
++.+++++|.|+||.|++++|+|||+++||+|+++|++
T Consensus 257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~ 294 (465)
T PRK15398 257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEK 294 (465)
T ss_pred HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-51 Score=411.44 Aligned_cols=264 Identities=22% Similarity=0.272 Sum_probs=234.6
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh----hhhh-------cchHHHH
Q 016216 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV----QSLK-------SEVPMVV 163 (393)
Q Consensus 95 ~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~Ev~~~~ 163 (393)
+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|.++|+++++.|+||+.. ++.. .|+..++
T Consensus 4 ~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~ 81 (417)
T PRK00197 4 EYLEELGRRAKAASR--KLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIA 81 (417)
T ss_pred hHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHH
Confidence 589999999999999 99999999999999999999999999999999988877642 3321 3788899
Q ss_pred HHHHHHHHhhhHhcCccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHH
Q 016216 164 RLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240 (393)
Q Consensus 164 ~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~ 240 (393)
+.+++++.+.+.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..
T Consensus 82 ~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~ 158 (417)
T PRK00197 82 EGLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRA 158 (417)
T ss_pred HHHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHH
Confidence 9999999876643 333332 22335788999999999999986 4 6788999999999999999999999999999
Q ss_pred HHHHH----HHcCCCCCcEEEEeCCc-hhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEc
Q 016216 241 VAKLF----HEAGLPPGVLNVVSGYG-PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIF 315 (393)
Q Consensus 241 l~~ll----~~aGlP~g~v~vv~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~ 315 (393)
+.+++ .++|+|+|++|+++|.+ .+.++.|..|+++|.|+||||+.+|+.|++.+ +||+++|||||||+||+
T Consensus 159 l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~ 234 (417)
T PRK00197 159 LVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVD 234 (417)
T ss_pred HHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEe
Confidence 98885 68899999999999644 55788899999999999999999999998864 58999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc
Q 016216 316 DDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (393)
Q Consensus 316 ~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~ 368 (393)
+|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|+++++++++
T Consensus 235 ~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 286 (417)
T PRK00197 235 ESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGV 286 (417)
T ss_pred CCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCC
Confidence 999999999999999999999 9999999999999999999999999999986
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-51 Score=402.72 Aligned_cols=253 Identities=17% Similarity=0.234 Sum_probs=226.4
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHH------HHHHcCCCh------hhhhhcchHHHHHHHHHHHH
Q 016216 104 ARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL------ETWNNGKPY------VQSLKSEVPMVVRLLHYYAG 171 (393)
Q Consensus 104 A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~------~~a~~~Ev~~~~~~l~~~a~ 171 (393)
|++||+ .|+.++.++|.++|+++++.|+++.++|+++ ++.|+|||. .++. .|+..+++.++||++
T Consensus 1 a~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~ 77 (398)
T TIGR00407 1 AKQAAN--ILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIE 77 (398)
T ss_pred ChhHHH--HHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhc
Confidence 467888 8999999999999999999999999999999 999999994 2344 489999999999998
Q ss_pred hhhHhcCccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHH----
Q 016216 172 WADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKL---- 244 (393)
Q Consensus 172 ~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~l---- 244 (393)
.++.+ +...+. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+.++
T Consensus 78 ~a~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~a 154 (398)
T TIGR00407 78 LADPV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDA 154 (398)
T ss_pred CCCCC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHH
Confidence 88654 443332 23456788999999999999997 6 66888999999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEEeCCc-hhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHH
Q 016216 245 FHEAGLPPGVLNVVSGYG-PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA 323 (393)
Q Consensus 245 l~~aGlP~g~v~vv~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a 323 (393)
+.++|+|+|+||+++|.+ .+.++.|..|++|++|+||||+.+|+.+.+. ..+|+++|+|||+|+||++|||+|.|
T Consensus 155 l~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~A 230 (398)
T TIGR00407 155 LAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKA 230 (398)
T ss_pred HHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHH
Confidence 569999999999999844 4578899999999999999999999988764 34899999999999999999999999
Q ss_pred HHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCc
Q 016216 324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI 367 (393)
Q Consensus 324 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~ 367 (393)
++.+++++|++ ||.|++++|+|||+++||+|+++|++++++++
T Consensus 231 a~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~ 273 (398)
T TIGR00407 231 IKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKG 273 (398)
T ss_pred HHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcC
Confidence 99999999965 99999999999999999999999999998765
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-51 Score=405.13 Aligned_cols=259 Identities=20% Similarity=0.248 Sum_probs=227.4
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh----hhh-------hcchHHHHHHHH
Q 016216 99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV----QSL-------KSEVPMVVRLLH 167 (393)
Q Consensus 99 ~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~-------~~Ev~~~~~~l~ 167 (393)
..+++|++||+ .|+.+|.++|.++|.++++.|+++.++|+++++.|+||+.. ++. ..|+..+++.++
T Consensus 2 ~~~~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~ 79 (406)
T cd07079 2 ELAKRAKAASR--ALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLR 79 (406)
T ss_pred hHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHH
Confidence 56788999999 99999999999999999999999999999999777766643 222 138899999999
Q ss_pred HHHHhhhHhcCccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHH
Q 016216 168 YYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKL 244 (393)
Q Consensus 168 ~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~l 244 (393)
+++...+. .+...+. ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..+.++
T Consensus 80 ~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~ 156 (406)
T cd07079 80 QVAALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEI 156 (406)
T ss_pred HHHhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHH
Confidence 99876542 2333222 2233567889999999999996 55 67889999999999999999999999999999999
Q ss_pred HH----HcCCCCCcEEEEeCCch-hHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCC
Q 016216 245 FH----EAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDAD 319 (393)
Q Consensus 245 l~----~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dAD 319 (393)
+. ++|+|+|++|+++|.+. +.++.|..|+++|.|+||||+++|+.|++.+ ++|+++|||||||+||++|||
T Consensus 157 ~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dAD 232 (406)
T cd07079 157 IQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESAD 232 (406)
T ss_pred HHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCC
Confidence 86 89999999999998543 6788899999999999999999999998765 589999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCc
Q 016216 320 VDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI 367 (393)
Q Consensus 320 ld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~ 367 (393)
+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|++++++..
T Consensus 233 l~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~g 279 (406)
T cd07079 233 LEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREAG 279 (406)
T ss_pred HHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999 999999999999999999999999998763
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-50 Score=374.18 Aligned_cols=313 Identities=29% Similarity=0.455 Sum_probs=288.8
Q ss_pred CCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcC
Q 016216 69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNG 148 (393)
Q Consensus 69 ~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G 148 (393)
..+.++++.+.|.||..++.++..++.|+++.+..|++|++ .|.+.+...|.++|+.+.+.+-+|.|.+++..++|+|
T Consensus 60 ~~~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQk--tW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtG 137 (583)
T KOG2454|consen 60 QQSDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQK--TWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTG 137 (583)
T ss_pred cCCCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHh--hhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccC
Confidence 44567899999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CChhhhhhcchHHHHHHHHHHHHhhhHhcCc-cccCC---CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCC
Q 016216 149 KPYVQSLKSEVPMVVRLLHYYAGWADKIHGL-TVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGN 224 (393)
Q Consensus 149 k~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN 224 (393)
|+..++..+|+..+++.+.|.....++.... ..|.. .-...++.++|+||++.|.|||||+...+.+++.||.+||
T Consensus 138 KTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGN 217 (583)
T KOG2454|consen 138 KTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGN 217 (583)
T ss_pred chhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCC
Confidence 9999999999999999999998877665433 22321 1234678999999999999999999999999999999999
Q ss_pred EEEEecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCc
Q 016216 225 TIVLKSAEQTPLTALYVAKL----FHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLK 300 (393)
Q Consensus 225 ~VIlKps~~~p~~~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 300 (393)
++|+|.|+.+..+.....++ |+..|-|+++|+++++- ++.++.|.+|++++.+.|.||+.+++.|++.+++ .++
T Consensus 218 aIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk-~LT 295 (583)
T KOG2454|consen 218 AIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAK-TLT 295 (583)
T ss_pred eEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcceEEEecCcHHHHHHHHhhhh-hcC
Confidence 99999999999887766655 55569999999999994 5778999999999999999999999999999998 999
Q ss_pred cEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCc
Q 016216 301 PVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP 380 (393)
Q Consensus 301 pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gp 380 (393)
|+++|||||+++||++|||++..+..++++.|..+||.|.+.+|++||+++||.|+..|-++++.++.|.|.-.+.|||.
T Consensus 296 Pv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGA 375 (583)
T KOG2454|consen 296 PVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGA 375 (583)
T ss_pred cEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccC
Q 016216 381 QVLFS 385 (393)
Q Consensus 381 li~~~ 385 (393)
+++..
T Consensus 376 m~s~n 380 (583)
T KOG2454|consen 376 MCSQN 380 (583)
T ss_pred hhhcc
Confidence 98753
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-49 Score=426.08 Aligned_cols=266 Identities=21% Similarity=0.265 Sum_probs=232.0
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHH
Q 016216 89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHY 168 (393)
Q Consensus 89 v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~ 168 (393)
+...+.+|+++++++|++||+ .|++++.++|.++|+++++.|+++.++|+++++.|+|||..+++..+...+++.+++
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~ 83 (862)
T PRK13805 6 MAVTNVAELDALVEKAKKAQE--EFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYN 83 (862)
T ss_pred cCCCCHHHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999 999999999999999999999999999999999999999988764344444444444
Q ss_pred HHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH--
Q 016216 169 YAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH-- 246 (393)
Q Consensus 169 ~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~-- 246 (393)
+.. .++..+. .+.+.....+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 84 ~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 84 SYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred Hhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 432 1122221 222234456788999999999999999999999999999999999999999999999999988875
Q ss_pred --HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHH
Q 016216 247 --EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAV 324 (393)
Q Consensus 247 --~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~ 324 (393)
++|+|+|+||+++|.+.+.+..|++|++||.|+||||+.++ +.+++ +++|+++|+|||+|+||++|||+|.|+
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~-~~~pv~~e~gGk~p~iV~~dADl~~Aa 236 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYS-SGKPALGVGAGNVPAYIDKTADIKRAV 236 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHh-cCCCeEEECCCCCeEEEeCCCCHHHHH
Confidence 68999999999998777889999999999999999999865 34444 789999999999999999999999999
Q ss_pred HHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHH
Q 016216 325 ELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA 363 (393)
Q Consensus 325 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~ 363 (393)
+.|++++|+|+||.|++++|||||+++||+|+++|+++.
T Consensus 237 ~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g 275 (862)
T PRK13805 237 NDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG 275 (862)
T ss_pred HHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC
Confidence 999999999999999999999999999999999997753
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-49 Score=412.61 Aligned_cols=257 Identities=20% Similarity=0.221 Sum_probs=227.5
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHH------HHHcC--CChhhhh---hcchHHHH
Q 016216 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALE------TWNNG--KPYVQSL---KSEVPMVV 163 (393)
Q Consensus 95 ~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a~---~~Ev~~~~ 163 (393)
+++++++++|++||+ .|+.+|..+|.++|+++++.|+++.++|++++ +.|+| ||+.++. ..|+..++
T Consensus 294 ~~~~~~~~aA~~A~~--~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~ 371 (718)
T PLN02418 294 VGAREMAVAARESSR--KLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLA 371 (718)
T ss_pred HHHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHH
Confidence 359999999999999 99999999999999999999999999999996 77999 8877763 35999999
Q ss_pred HHHHHHHHhhhHhcCcccc---CCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHH
Q 016216 164 RLLHYYAGWADKIHGLTVP---GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240 (393)
Q Consensus 164 ~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~ 240 (393)
+.++||++. .+..+...+ ...+...++.++|+|||++|+||| |+... ++++|||++||+||+|||+.+|+++..
T Consensus 372 ~~~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~ 448 (718)
T PLN02418 372 ASIRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAI 448 (718)
T ss_pred HHHHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHH
Confidence 999999988 334444433 122334678899999999999999 99999 999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCc----EEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcC
Q 016216 241 VAKLFHEAGLPPGV----LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316 (393)
Q Consensus 241 l~~ll~~aGlP~g~----v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~ 316 (393)
|++++.++ +|+|+ +|+++| +.++++.|..|+.|++|+||||+. .+++.++. ++||+++|+|||+|+||++
T Consensus 449 l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~---~i~~~aa~-~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 449 LHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNK---LVSQIKAS-TKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHH---HHHHHHHh-cCCCEEEeCCCcceEEEeC
Confidence 99999999 99996 999998 567899999999999999999996 45555555 7899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHH-HHHHHHHHH
Q 016216 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE-FVEKAKARA 363 (393)
Q Consensus 317 dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~-f~~~L~~~~ 363 (393)
|||+|.|++.+++++|.| ||.|++.+|+|||+++||+ .+..+.+.+
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~G~~~~~i~~a 569 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQNGGLNDLLVAL 569 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEeccccccccHHHHHHHH
Confidence 999999999999999999 9999999999999999998 555554443
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-49 Score=372.81 Aligned_cols=325 Identities=26% Similarity=0.357 Sum_probs=298.3
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH-
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE- 133 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~- 133 (393)
...++.|||+.+.+ ..++...+|++ +.+++++..++..+++.|+++|.+|++ .|..+|..+|.+|++|.|+++.
T Consensus 58 ~evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~--~W~~~PiadR~aI~lkAAdlist 133 (561)
T KOG2455|consen 58 LEVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQK--TWELVPIADRLAIFLKAADLIST 133 (561)
T ss_pred eeccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcC--ccccCcHHHHHHHHHHHHHHhcc
Confidence 34589999999975 34578888988 668999999999999999999999998 9999999999999999999998
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecc-eeEEEECCCCccHHH
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPI-GVAGQIVPWNFPLLL 211 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i~p~N~P~~~ 211 (393)
+.+-+|....+...||...++..+-+.+.++++|+.+..+.++....... ..+..+...++|+ |.|+.|+||||-...
T Consensus 134 kyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~ 213 (561)
T KOG2455|consen 134 KYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIG 213 (561)
T ss_pred hHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeec
Confidence 78888999999999999999987668899999999999988876554433 4455677788888 999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.-...+||| +||+|++|||..+.++++.+.++|+|||+|+|++|+++++++.+++.+..++++.++.||||+.+-+.+.
T Consensus 214 gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lw 292 (561)
T KOG2455|consen 214 GNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLW 292 (561)
T ss_pred cccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHH
Confidence 988899999 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-----cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcC
Q 016216 292 ELAAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366 (393)
Q Consensus 292 ~~~a~-----~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~ 366 (393)
++.++ +...+++.|+||||.-+|+++||++.++...++++|.++||.|++.+|+||+++.++.+.++|.+.-+++
T Consensus 293 k~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~ 372 (561)
T KOG2455|consen 293 KKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQL 372 (561)
T ss_pred HHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhc
Confidence 98886 2357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCccCcccccC
Q 016216 367 IVGDP-FKSGVEQGPQVLFS 385 (393)
Q Consensus 367 ~~G~p-~~~~~~~Gpli~~~ 385 (393)
++||| .|-.+.+||+|+.+
T Consensus 373 ~igd~~~d~~~f~gavIh~~ 392 (561)
T KOG2455|consen 373 KIGDPVIDFSTFIGAVIHDK 392 (561)
T ss_pred ccCCccccccchhhhhccHH
Confidence 99998 78899999999865
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-48 Score=365.26 Aligned_cols=281 Identities=28% Similarity=0.347 Sum_probs=252.7
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHh
Q 016216 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI 176 (393)
Q Consensus 97 v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~ 176 (393)
+++.++.+|.+|..| +.-|.+.|.+.|+++...+++|.++|.+++..|.+|+..++...|+...++.++++....+++
T Consensus 4 ~~~~v~~~R~~F~sG--rtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~w 81 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSG--RTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEW 81 (477)
T ss_pred HHHHHHHHHHHHhcC--CcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 455689999999955 789999999999999999999999999999999999999998889999999999988877765
Q ss_pred cCccc-c---CCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCC
Q 016216 177 HGLTV-P---GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP 252 (393)
Q Consensus 177 ~~~~~-~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~ 252 (393)
-.... + ..-....+.+.+|.|||++|+|||||+...+.++++||++||+||+|||+.+|.++..+++++.++ |++
T Consensus 82 v~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~ 160 (477)
T KOG2456|consen 82 VKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQ 160 (477)
T ss_pred ccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCc
Confidence 43321 1 112345788999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHH
Q 016216 253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332 (393)
Q Consensus 253 g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~ 332 (393)
+++.|+.|.-++ ...|+.| ++|.|.||||+.+|+.|+.++++ +++||+||||||||++|++|+|++-+++.|.|+++
T Consensus 161 ~~~~VV~Ggv~E-Tt~LL~~-rfD~IfyTGsp~VgkIim~aAaK-hLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 161 DLIRVVNGGVPE-TTELLKQ-RFDHIFYTGSPRVGKIIMAAAAK-HLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred ceEEEecCCCch-HHHHHHh-hccEEEecCCchHHHHHHHHHHh-cCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 999999995444 5566665 99999999999999999999998 99999999999999999999999999999999999
Q ss_pred hccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 333 ~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
.|+||.|.++++|+++.++++.++++++..+++.. |+..+++.+++-+|+.
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~ 288 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQ 288 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhH
Confidence 99999999999999999999999999999999986 4445566788877764
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-48 Score=389.31 Aligned_cols=254 Identities=21% Similarity=0.222 Sum_probs=231.4
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhh----------hcchHHHHHHHHHHHHh
Q 016216 103 TARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSL----------KSEVPMVVRLLHYYAGW 172 (393)
Q Consensus 103 ~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~----------~~Ev~~~~~~l~~~a~~ 172 (393)
+|++||+ .|+.++..+|.++|+++++.|+++.++|+++++.|+|||+.... ..|+..+++.+++++..
T Consensus 2 ~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 2 SAKNAQR--TLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred hHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 5888999 99999999999999999999999999999999999999865432 13788999999999876
Q ss_pred hhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHc---C
Q 016216 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA---G 249 (393)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~a---G 249 (393)
..+..+...+. ....++.++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++..+.+++.++ |
T Consensus 80 ~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 80 VGHIQDVLLPD--NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred cCcccceEecC--CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 55554443332 2356889999999999999999999 9999999999999999999999999999999999987 9
Q ss_pred CCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHH
Q 016216 250 LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHF 329 (393)
Q Consensus 250 lP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~ 329 (393)
+|+++++++++.+.+.+..|+.|+++|.|+||||+++++.+.+.+. ++|+++|+||++|+||++|||++.|++.+++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~ 233 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHD 233 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence 9999999999877788999999999999999999999999988763 5899999999999999999999999999999
Q ss_pred HHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhc
Q 016216 330 ALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 365 (393)
Q Consensus 330 ~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~ 365 (393)
++|+| ||.|++++++|||+++||+|+++|+++++.
T Consensus 234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~ 268 (397)
T cd07077 234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV 268 (397)
T ss_pred hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh
Confidence 99999 999999999999999999999999999876
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-48 Score=379.52 Aligned_cols=277 Identities=53% Similarity=0.801 Sum_probs=249.7
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc
Q 016216 103 TARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP 182 (393)
Q Consensus 103 ~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~ 182 (393)
+|+++++ .|+.++.++|.++|+++++.|.++.++|++++++|+|||+.+++. |+..+++.+++++...++..+...+
T Consensus 2 ~a~~a~~--~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~ 78 (367)
T cd06534 2 AARAAFK--AWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPELP 78 (367)
T ss_pred hHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccc
Confidence 5788898 999999999999999999999999999999999999999998875 9999999999999988877653322
Q ss_pred -CCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 016216 183 -GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGY 261 (393)
Q Consensus 183 -~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 261 (393)
...+...+.+++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|+
T Consensus 79 ~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~ 158 (367)
T cd06534 79 SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG 158 (367)
T ss_pred ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC
Confidence 2345668889999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred chhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccC
Q 016216 262 GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA 341 (393)
Q Consensus 262 ~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a 341 (393)
+.+.++.|..|+++|.|.||||+++++.|.+.+++ +++|+++|+||+|++||++|+|++.|++.+++++|+++||.|++
T Consensus 159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~-~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s 237 (367)
T cd06534 159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAE-NLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237 (367)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 77788999999999999999999999999999987 78999999999999999999999999999999999999999999
Q ss_pred CceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccc
Q 016216 342 GSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVL 383 (393)
Q Consensus 342 ~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~ 383 (393)
+++||||++++|+|+++|+..+....-..+.......||++.
T Consensus 238 ~~~v~v~~~~~~~f~~~l~tl~~~~~~~~~~~~~E~fgPv~~ 279 (367)
T cd06534 238 ASRLLVHESIYDEFVEKLVTVLVDVDPDMPIAQEEIFGPVLP 279 (367)
T ss_pred CcEEEEcHHHHHHHHHhhceeeeCCCCCCccccCCccCceEE
Confidence 999999999999999999844333332333333445788764
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-49 Score=360.09 Aligned_cols=318 Identities=31% Similarity=0.528 Sum_probs=296.0
Q ss_pred eCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHH
Q 016216 62 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAA 141 (393)
Q Consensus 62 I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 141 (393)
.+|+|- .+|..++.++|.+.++|+.|..++.+|.+.+++.|++|++ .|...|...|.++.+.+.|.|+...+.|-+
T Consensus 24 y~gkw~--a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~k--iw~~vpapkrgeivrqigdalr~klq~lg~ 99 (507)
T KOG2453|consen 24 YHGKWA--ASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYK--IWCEVPAPKRGEIVRQIGDALRTKLQNLGK 99 (507)
T ss_pred eeeeec--cCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHH--HHhcCCCCccchHHHHHHHHHHHHHHHHhh
Confidence 466995 4789999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCC-CceEEEEEecceeEEEECCCCccHHHHHHHHHHHh
Q 016216 142 LETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL 220 (393)
Q Consensus 142 ~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~AL 220 (393)
++++|+||-..+.. +|+++-++.++|..+..+.+.+..+|... ++.....|.|+|+|++|+.+|||....-|.-.-|+
T Consensus 100 lvslemgkilaegv-gevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaM 178 (507)
T KOG2453|consen 100 LVSLEMGKILAEGV-GEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAM 178 (507)
T ss_pred hhhhhhhhHhhhcc-hhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhh
Confidence 99999999998876 69999999999999999999999888653 45556689999999999999999999999999999
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 221 TCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 221 aaGN~VIlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
.+||+|++||++.+|+++....+++ .+--+|++......| +.+.+.++..+.++..+.||||+++++.+.+...+
T Consensus 179 v~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqa 257 (507)
T KOG2453|consen 179 VCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQA 257 (507)
T ss_pred hhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHHH
Confidence 9999999999999999887666654 455799998888888 67889999999999999999999999999998887
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++.+..+||||+|++||.+|||+..++...++++...+||+|+..+|++||+++||+++++|++.++++++|+|+|+++
T Consensus 258 -rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~nt 336 (507)
T KOG2453|consen 258 -RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNT 336 (507)
T ss_pred -HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCc
Confidence 6678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccCC
Q 016216 377 EQGPQVLFSA 386 (393)
Q Consensus 377 ~~Gpli~~~~ 386 (393)
-+|||.+.++
T Consensus 337 l~gplht~qa 346 (507)
T KOG2453|consen 337 LIGPLHTQQA 346 (507)
T ss_pred eeccccCHHH
Confidence 9999999875
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-45 Score=383.26 Aligned_cols=253 Identities=18% Similarity=0.185 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhc---------------chH
Q 016216 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS---------------EVP 160 (393)
Q Consensus 96 ~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~---------------Ev~ 160 (393)
+++..+++|++||. .|+.++.++|.++|+++++.|+++.++|+ .++||++.+++.. |+.
T Consensus 287 ~~~~~~~~A~~A~~--~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~ 360 (715)
T TIGR01092 287 GERDMAVAARESSR--MLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKIS 360 (715)
T ss_pred HHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHH
Confidence 48888999999999 99999999999999999999999999997 4788888776531 477
Q ss_pred HHHHHHHHHHHhhhHhcCcccc---CCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHH
Q 016216 161 MVVRLLHYYAGWADKIHGLTVP---GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237 (393)
Q Consensus 161 ~~~~~l~~~a~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~ 237 (393)
.+++.++++++. .+..+...+ ...+...+..++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|++
T Consensus 361 ~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t 437 (715)
T TIGR01092 361 SLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARS 437 (715)
T ss_pred HHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHH
Confidence 788888888873 333333322 112334567899999999999999 9998 6899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC----cEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEE
Q 016216 238 ALYVAKLFHEAGLPPG----VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (393)
Q Consensus 238 ~~~l~~ll~~aGlP~g----~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~i 313 (393)
+..+.+++.++ ||+| +++++++ +.+.++.|..|+.+|.|+||||+.+|+.|++.++ +|+++|+|||||+|
T Consensus 438 ~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~i 511 (715)
T TIGR01092 438 NAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVY 511 (715)
T ss_pred HHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEE
Confidence 99999999999 9987 6899985 5677889999999999999999999999998863 89999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHH-HHHHHHHHHh
Q 016216 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE-FVEKAKARAM 364 (393)
Q Consensus 314 V~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~-f~~~L~~~~~ 364 (393)
|++|||++.|++.++.+.|.+ ||.|++++|+|||+++||+ +++++.+.+.
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~~~~~~~v~~~~ 562 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRNGLLDDLIDMLR 562 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccchhHHHHHHHHH
Confidence 999999999997777777655 9999999999999999997 5566655553
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=282.62 Aligned_cols=267 Identities=17% Similarity=0.168 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH----HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHH--H
Q 016216 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE----KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLH--Y 168 (393)
Q Consensus 95 ~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~----~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~--~ 168 (393)
.++++.++..+...+ ....++.++..+++.++++.+. ..+.+..+.+...+|.+....+. .+......++ .
T Consensus 5 ~~~~~~~~~l~~~~~--~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~-a~~~l~~~~~r~~ 81 (422)
T cd07080 5 PDLDALIEELRLNRR--ALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLRE-GLKRLMALFRREN 81 (422)
T ss_pred HHHHHHHHHHHhhHH--hHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHH-HHHHHHHHcCHHH
Confidence 344444444443333 4456667777777776666664 23344455555555655333221 2222222222 1
Q ss_pred HHHhhh-HhcCc-cc--cCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHH
Q 016216 169 YAGWAD-KIHGL-TV--PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKL 244 (393)
Q Consensus 169 ~a~~~~-~~~~~-~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~l 244 (393)
...... .+... .+ ....+...++.++|+|++++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..|.++
T Consensus 82 l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~ 160 (422)
T cd07080 82 LERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRS 160 (422)
T ss_pred HHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHH
Confidence 111111 11100 00 0111345678899999999999999999 7899999999999999999999999999999999
Q ss_pred HHHcCCCC----CcEEEEe--CCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCe-EEEcCC
Q 016216 245 FHEAGLPP----GVLNVVS--GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSP-FIIFDD 317 (393)
Q Consensus 245 l~~aGlP~----g~v~vv~--g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~-~iV~~d 317 (393)
|.++ +|+ +.++++. |.+.++++.|..++ |.|+||||+++++.|++.++. + +.++|+|||++ +|+.++
T Consensus 161 l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~-~--~~~Le~Ggk~s~~vi~~~ 234 (422)
T cd07080 161 LADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPP-G--CRLIDFGPKYSFAVIDRE 234 (422)
T ss_pred HHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCC-C--CeeeecCCceeEEEecHH
Confidence 9999 787 8888884 65666889999876 999999999999999998875 4 56999999955 555556
Q ss_pred C----CHHHHHHHHHHHHHhccCCCccCCceEEEcCcc---HHHHHHHHHHHHhcCccCCC
Q 016216 318 A----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERV---YDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 318 A----Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i---~d~f~~~L~~~~~~~~~G~p 371 (393)
+ |++.+++.+++++|.|+||.|+|++++|||+++ +++|.++|.++++++.-..|
T Consensus 235 a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p 295 (422)
T cd07080 235 ALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYP 295 (422)
T ss_pred hhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCC
Confidence 8 999999999999999999999999999999999 99999999999998754444
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-24 Score=203.30 Aligned_cols=263 Identities=18% Similarity=0.224 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCC----hhhhhhcc-------hHHHH
Q 016216 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP----YVQSLKSE-------VPMVV 163 (393)
Q Consensus 95 ~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~~E-------v~~~~ 163 (393)
.++.+..+.|++|.. ....++.++|.+.|..+++.|+.+.++|.++...|.-.. +.++..+. +..++
T Consensus 3 ~~~~~~~~~Ak~A~~--~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma 80 (417)
T COG0014 3 SELEELGKRAKAASR--KLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMA 80 (417)
T ss_pred hHHHHHHHHHHHHHH--HHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHH
Confidence 356778888999988 899999999999999999999999999998877654211 11222222 23333
Q ss_pred HHHHHHHHhhhHhcCccc--cCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHH
Q 016216 164 RLLHYYAGWADKIHGLTV--PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241 (393)
Q Consensus 164 ~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l 241 (393)
+.++..+...+.+..... ..+.+...+..+.|+||+++| |.............||.+||+||+|.+..+..+...+
T Consensus 81 ~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai 158 (417)
T COG0014 81 DGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAI 158 (417)
T ss_pred HHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHH
Confidence 444444443333221111 134577888899999999999 7777788888889999999999999999999999988
Q ss_pred HHHHH----HcCCCCCcEEEEeCC-chhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcC
Q 016216 242 AKLFH----EAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFD 316 (393)
Q Consensus 242 ~~ll~----~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~ 316 (393)
+++++ ++|+|++.||+++.. ..++.+.|..+..||.|+..|+....+.|.+.+. .||+-.+-|+|.++|++
T Consensus 159 ~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~----vPVi~~~~G~CHiyvd~ 234 (417)
T COG0014 159 VEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT----VPVIEHGVGNCHIYVDE 234 (417)
T ss_pred HHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc----CCEEecCcceEEEEecc
Confidence 88765 569999999999974 4556677777888999999999988888877643 79999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcC
Q 016216 317 DADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366 (393)
Q Consensus 317 dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~ 366 (393)
+||+|+|.+.++.++....+ .|++.+.++||+.+.++|+.+|.+.+...
T Consensus 235 ~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~ 283 (417)
T COG0014 235 SADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA 283 (417)
T ss_pred cCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc
Confidence 99999999999999999997 99999999999999999999999998854
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.8e-19 Score=163.50 Aligned_cols=256 Identities=20% Similarity=0.218 Sum_probs=195.1
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHH------HHcCCChhhhhh-----cchHHHHHH
Q 016216 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALET------WNNGKPYVQSLK-----SEVPMVVRL 165 (393)
Q Consensus 97 v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~------~e~Gk~~~~a~~-----~Ev~~~~~~ 165 (393)
+++..+.|++++. ....++.++|.++|..+++.|..+..++..+.. .+.|.....-.. +.+......
T Consensus 2 ~e~~a~~aR~a~r--~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGR--ILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhh--HHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHH
Confidence 4566788999998 899999999999999999999988877766543 344422111100 112222233
Q ss_pred HHHHHHhhhHhcCccc---cCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHH
Q 016216 166 LHYYAGWADKIHGLTV---PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVA 242 (393)
Q Consensus 166 l~~~a~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~ 242 (393)
++..+...+. -|... ....+...+....|+||.++| |....-.+......|++.||.+++|....+..+...|.
T Consensus 80 ~~~ia~~edp-vGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~ 156 (433)
T KOG4165|consen 80 LRQIAELEDP-VGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALH 156 (433)
T ss_pred HHHHHhcccc-hhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHH
Confidence 3333331111 11111 123456677788999999999 77777777777888999999999999999999999998
Q ss_pred HHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCC
Q 016216 243 KLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318 (393)
Q Consensus 243 ~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dA 318 (393)
++..++ |.|.+.|++++. ..++.+.|..+..||.|+..||+...+.|... ..+||.-+..|.+.++|++||
T Consensus 157 ~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~----tkIPVLGHA~GichvYvd~da 231 (433)
T KOG4165|consen 157 KLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDT----TKIPVLGHAEGICHVYVDKDA 231 (433)
T ss_pred HHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhc----ccCcccccccceeEEEecccc
Confidence 887776 778999999987 67788888888899999999999999988665 338999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccCCCccCCceEEEcCcc-HHHHHHHHHHHH
Q 016216 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARA 363 (393)
Q Consensus 319 Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~L~~~~ 363 (393)
|+++|.+.+.++++.+.- .|++.+.+++|++. ...|++.|...+
T Consensus 232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l 276 (433)
T KOG4165|consen 232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINML 276 (433)
T ss_pred CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHH
Confidence 999999999999999985 89999999999972 334444444433
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-13 Score=136.25 Aligned_cols=172 Identities=20% Similarity=0.195 Sum_probs=142.2
Q ss_pred EEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCC----CcEEEE--eCCc
Q 016216 189 IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP----GVLNVV--SGYG 262 (393)
Q Consensus 189 ~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~----g~v~vv--~g~~ 262 (393)
.+..+.|.|++++|.|.|.|...+.. ++-+|++||..|+|.|+..+.++..|.+.|.+. .|. ..+.++ .+.+
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 56779999999999999999966654 666888999999999999999999999999887 554 345666 4556
Q ss_pred hhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCC
Q 016216 263 PTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAG 342 (393)
Q Consensus 263 ~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~ 342 (393)
.++.+.+. ...|+++.+||.++.+.|.+.+. ..++.+....-.+..||..+++++.+++.+..-.+...+|.|.|+
T Consensus 159 ~~~~~~~~--~~~D~vv~wGgd~ti~~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp 234 (399)
T PF05893_consen 159 EELEEALS--QQADAVVAWGGDETIRAIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP 234 (399)
T ss_pred hHHHHHHH--HHCCEEEEeCCHHHHHHHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence 66777776 46799999999999999999443 346666666778888888999999999999999999999999999
Q ss_pred ceEEEc---CccHHHHHHHHHHHHhcC
Q 016216 343 SRTYVH---ERVYDEFVEKAKARAMRR 366 (393)
Q Consensus 343 ~~v~V~---~~i~d~f~~~L~~~~~~~ 366 (393)
+.+||. +.-.++|.++|.+++++.
T Consensus 235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~ 261 (399)
T PF05893_consen 235 QVIFVETGDGDSVEEFAERLAEALERA 261 (399)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHHH
Confidence 999998 334678888887777654
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.9e-08 Score=109.61 Aligned_cols=111 Identities=16% Similarity=0.125 Sum_probs=88.2
Q ss_pred ccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEE
Q 016216 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv 258 (393)
..+|+++|+.+..+..|+|++++|+||| ..++.++..||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1062 ~~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~ 1129 (1208)
T PRK11905 1062 QELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI 1129 (1208)
T ss_pred ccCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc
Confidence 3567888999999999999999999999 568889999999999999999998752 11 23566555544
Q ss_pred eCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCC--ccEEEec
Q 016216 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL--KPVTLEL 306 (393)
Q Consensus 259 ~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~--~pv~lel 306 (393)
.++..+..+++|+.|.|+|++++.+.|.+.++++.+ .|++.|.
T Consensus 1130 -----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1130 -----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred -----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 233467778899999999999999999999998652 3444443
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0026 Score=71.98 Aligned_cols=105 Identities=16% Similarity=0.085 Sum_probs=79.0
Q ss_pred ccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEE
Q 016216 179 LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258 (393)
Q Consensus 179 ~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv 258 (393)
..+|+++|+.+.....|+|+|+++.+-. ...+.++..+|++||.+|+..++.. ...+ ++||+.+.+.+
T Consensus 1171 ~~LPGPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~~~~------~~Lp~~v~~~v 1238 (1318)
T PRK11809 1171 RLLPGPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---RALV------AALPAAVQARI 1238 (1318)
T ss_pred ccCCCCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---HHHH------HhccHHHHhHh
Confidence 3567888999999999999999998733 3678999999999999988644331 1212 46998887765
Q ss_pred eCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCC
Q 016216 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNL 299 (393)
Q Consensus 259 ~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 299 (393)
.-. . ........++.|.|.|..+..+.+.++++++.+
T Consensus 1239 ~~~---~-~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809 1239 QLA---K-DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred hhc---c-ccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence 321 1 122233678999999999999999999988653
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.006 Score=54.97 Aligned_cols=56 Identities=23% Similarity=0.347 Sum_probs=48.0
Q ss_pred CCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcC
Q 016216 309 KSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366 (393)
Q Consensus 309 ~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~ 366 (393)
..-+||++|.|++.|+..++.+.-.--| ..+.-.|+|||++.|+|+++++.+++.+
T Consensus 5 P~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl 60 (215)
T PF07368_consen 5 PQLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL 60 (215)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC
Confidence 3458999999999999999999865544 4577889999999999999999988755
|
The function of this family is unknown. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.33 E-value=5.5 Score=39.71 Aligned_cols=168 Identities=17% Similarity=0.152 Sum_probs=97.7
Q ss_pred CCceEEEEEecceeEEEECC---CCccHHHHHHHHHHHhhcCCEEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 016216 185 GNYHIQTLHEPIGVAGQIVP---WNFPLLLFTWKVAPALTCGNTIVL--KSAEQTPLTALYVAKLFHEAGLPPGVLNVVS 259 (393)
Q Consensus 185 ~~~~~~~~~~P~Gvv~~i~p---~N~P~~~~~~~l~~ALaaGN~VIl--Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~ 259 (393)
.|..+...+.|+--|++..| .-||-..++ ..+||-.+|+.=|+ -|+...- .+-.+.-..+.+|+.+ |.-+
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e--Iy~v- 180 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE--VYKV- 180 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH--HHHc-
Confidence 45667788999999999999 455555444 47789999986543 4444322 2333444445566543 1112
Q ss_pred CCchhHHHHHHcC----CCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEE-cCCCCHHHHHHHHHHHHHhc
Q 016216 260 GYGPTAGAALASH----MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII-FDDADVDQAVELAHFALFYN 334 (393)
Q Consensus 260 g~~~~~~~~L~~~----~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV-~~dADld~a~~~i~~~~~~~ 334 (393)
| |.+.-.+|.-. +.||+|+=.|..=+... +.... +..-+=+..|-..-+|| ++++|.+..+..++.-+=+.
T Consensus 181 G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~-g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd 256 (425)
T COG0141 181 G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVS-GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHD 256 (425)
T ss_pred c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhh-CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcC
Confidence 2 45555666655 88999998887654331 11111 22222222233333444 45599999998877665444
Q ss_pred cCCCccCCceEEEcCc--cHHHHHHHHHHHHhcC
Q 016216 335 QGQCCCAGSRTYVHER--VYDEFVEKAKARAMRR 366 (393)
Q Consensus 335 ~GQ~C~a~~~v~V~~~--i~d~f~~~L~~~~~~~ 366 (393)
. ..+.++|..+ +.++..+.+.+.+..+
T Consensus 257 ~-----~a~aiLvT~s~~la~~v~~~v~~~l~~l 285 (425)
T COG0141 257 P-----DAQAILVTDSEELAEAVEAAVERQLETL 285 (425)
T ss_pred C-----CceEEEEeCcHHHHHHHHHHHHHHHHhc
Confidence 3 2556677555 4555555555555543
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=91.94 E-value=15 Score=36.86 Aligned_cols=169 Identities=18% Similarity=0.102 Sum_probs=79.0
Q ss_pred CCceEEEEEecceeEEEECCC-CccHHHH-HHHHHHHhhcCCEEEE--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 016216 185 GNYHIQTLHEPIGVAGQIVPW-NFPLLLF-TWKVAPALTCGNTIVL--KSAEQTPLTALYVAKLFHEAGLPPGVLNVVSG 260 (393)
Q Consensus 185 ~~~~~~~~~~P~Gvv~~i~p~-N~P~~~~-~~~l~~ALaaGN~VIl--Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g 260 (393)
.|......+.|+--|++..|. .+|+-+. +..++||-.+|..=|+ -|+...-...-.+.-..+.+|..+ |..+ |
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v-G 172 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV-G 172 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE---
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-c
Confidence 355667789999999999994 4454333 4567899999976554 444332223334455567777753 3323 3
Q ss_pred CchhHHHHHHc----CCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeE--EEcCCCCHHHHHHHHHHHHHhc
Q 016216 261 YGPTAGAALAS----HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPF--IIFDDADVDQAVELAHFALFYN 334 (393)
Q Consensus 261 ~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~--iV~~dADld~a~~~i~~~~~~~ 334 (393)
|.+.-.+|.- -+.||+|+=.|..=+...=...... -.+-. +.|.+=+ |.+++||.+..+..++.-+=+.
T Consensus 173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~-V~ID~---~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd 247 (412)
T PF00815_consen 173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGD-VGIDM---IAGPSEVLVIADETANPEFVAADLLAQAEHD 247 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS--EES---------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCC-cccCC---CCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence 4444445443 4889999998876554322222221 11111 2344433 3356799999988877665444
Q ss_pred cCCCccCCceEEEcCc--cHHHHHHHHHHHHhcC
Q 016216 335 QGQCCCAGSRTYVHER--VYDEFVEKAKARAMRR 366 (393)
Q Consensus 335 ~GQ~C~a~~~v~V~~~--i~d~f~~~L~~~~~~~ 366 (393)
.. .+.++|..+ ..+++.+.+.+.++.+
T Consensus 248 ~~-----a~~vLvt~s~~la~~V~~~v~~~l~~l 276 (412)
T PF00815_consen 248 PD-----AQAVLVTTSEELAEAVEAEVERQLEEL 276 (412)
T ss_dssp TT------EEEEEES-HHHHHHHHHHHHHHHTT-
T ss_pred CC-----CceEEEECCHHHHHHHHHHHHHHHHhC
Confidence 32 345566544 4566666666666544
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.50 E-value=27 Score=34.45 Aligned_cols=163 Identities=16% Similarity=0.102 Sum_probs=92.8
Q ss_pred CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchh
Q 016216 185 GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPT 264 (393)
Q Consensus 185 ~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~ 264 (393)
.|...-..+.|+-.|++..|.-||-. .+-..+||-.+|+.=|+--+|-.. ..-.+.-..+.+|..+ |.-+ | |.+
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pSt-vLM~~iPAkvAGV~~Iv~~TPp~~-i~p~vL~aa~~~Gv~e--Iy~v-G-GAQ 156 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVST-LVMLAVPARAAGVEEIYVVTPPRG-VTGELLAVAKELGVKG--VLAI-G-GPH 156 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHHH-HHHhhccHhhcCCCeEEEeCCCCC-CCHHHHHHHHHcCCCe--eecc-c-CHH
Confidence 44556678999999999999544433 355678999999876543222111 2222333557777654 2222 3 444
Q ss_pred HHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCce
Q 016216 265 AGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSR 344 (393)
Q Consensus 265 ~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~ 344 (393)
.-.++.....||+|+=.|..=+...=++.. +..-+=+-.|-.--+||.+++|.+.++..++.-+=+.. ..+.
T Consensus 157 AIAa~a~gt~VDkIvGPGN~yV~~AK~~v~---g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~-----~a~~ 228 (368)
T PRK13769 157 GLAYAVFHMGVDMVAGPGGLYVQAAKYVLS---QYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP-----TSFA 228 (368)
T ss_pred HHHHHhcCCCcCEEECCCcHHHHHHHHHHh---CCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC-----CCcE
Confidence 445666666999999888765433211111 21111122244555666677999988877765543332 2455
Q ss_pred EEEcCc--cHHHHHHHHHH
Q 016216 345 TYVHER--VYDEFVEKAKA 361 (393)
Q Consensus 345 v~V~~~--i~d~f~~~L~~ 361 (393)
++|..+ +.++..+++.+
T Consensus 229 iLvT~s~~la~~V~~~v~~ 247 (368)
T PRK13769 229 YLLSTDAELLKAAEEIYRR 247 (368)
T ss_pred EEEECCHHHHHHHHHHHHH
Confidence 666554 33444444433
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=88.13 E-value=5.5 Score=41.04 Aligned_cols=110 Identities=20% Similarity=0.239 Sum_probs=75.0
Q ss_pred cccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 016216 180 TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVS 259 (393)
Q Consensus 180 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~ 259 (393)
.++...++.+.....|.|-|+++.+ +....+.+++.+|++||.+++-+.+.. ..++. .+|.++-..+.
T Consensus 628 ~LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~~--~l~~~v~~~~~ 695 (769)
T COG4230 628 LLPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALLK--DLPSAVASRIQ 695 (769)
T ss_pred ecCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHHH--hchhhhhhhee
Confidence 3566778889999999999999855 567888899999999999998765432 12111 25554422222
Q ss_pred CCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecC
Q 016216 260 GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG 307 (393)
Q Consensus 260 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelg 307 (393)
-.++. ...-.++.+.|-|..+-.+.+.+..+.+. .|++.-.+
T Consensus 696 ~~~~~-----~~~~~~~~vl~~gd~~~~r~~~~~iA~~~-Gpiv~~~~ 737 (769)
T COG4230 696 VAKDW-----TADIPFDAVLFHGDSDRLRALCEAIAARD-GPIVSVQG 737 (769)
T ss_pred eccch-----hhccceeeEEecCCHHHHHHHHHHHhcCC-CCeEEeec
Confidence 21221 33356789999999999999998777633 45554433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 393 | ||||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-119 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-119 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-119 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-119 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-119 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-119 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-118 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-118 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-118 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-117 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-117 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-110 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-104 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 3e-78 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 6e-78 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 2e-77 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 5e-77 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 6e-77 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 3e-76 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 1e-70 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-70 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 9e-70 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-69 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-69 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 9e-66 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 2e-65 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 1e-63 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 8e-62 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 8e-60 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 8e-60 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-58 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 5e-58 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 3e-57 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 1e-56 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 4e-56 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-55 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-55 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 3e-54 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 2e-53 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 6e-53 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 1e-52 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 4e-48 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 5e-47 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 7e-47 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 7e-47 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 8e-47 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 9e-47 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-45 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 1e-45 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 4e-44 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 1e-42 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-42 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 5e-41 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 4e-40 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 1e-39 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 2e-39 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 3e-39 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 8e-39 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 2e-38 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-37 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 7e-36 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 4e-35 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 1e-34 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-34 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 3e-34 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 2e-33 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-33 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 3e-32 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 5e-30 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 5e-30 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 6e-30 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 9e-30 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-28 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-27 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 6e-26 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 1e-24 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 3e-24 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 7e-23 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 3e-20 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 2e-19 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 2e-18 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-18 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 7e-18 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 8e-18 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-17 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 2e-14 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 3e-14 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 3e-14 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 3e-14 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 4e-13 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 2e-10 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 3e-06 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 1e-04 |
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 617 bits (1594), Expect = 0.0
Identities = 185/345 (53%), Positives = 247/345 (71%), Gaps = 2/345 (0%)
Query: 40 STAAVVEEPI-IPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDID 98
S++A+ + P + +Q YTK IN ++ + SGK FPV++P T E + V EGD ED+D
Sbjct: 2 SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVD 61
Query: 99 RAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
+AV AR+AF G PW M ER R++ + ADLIE++ LA +E N GK + +
Sbjct: 62 KAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLM 121
Query: 158 EVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217
++ ++ L Y AGWADKI G T+P DGN+ T EP+GV GQI+PWNFPLL+F WK+
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIG 181
Query: 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDK 277
PAL+CGNT+V+K AEQTPLTAL++ L EAG PPGV+N+V GYGPTAGAA++SHMDVDK
Sbjct: 182 PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDK 241
Query: 278 LSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQ 337
++FTG + GK+++E A KSNLK V+LELGGKSP I+F DAD+D AVE AH +FY+QGQ
Sbjct: 242 VAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ 301
Query: 338 CCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
CC A SR +V E +YDEFV ++ RA + ++G+P GV QGPQ+
Sbjct: 302 CCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQI 346
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 615 bits (1588), Expect = 0.0
Identities = 205/345 (59%), Positives = 250/345 (72%), Gaps = 2/345 (0%)
Query: 40 STAAVVEEPI-IPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDID 98
S AA P ++ + IN ++ DA S KTFP +P T EVI VAEGD ED+D
Sbjct: 1 SAAATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVD 60
Query: 99 RAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
+AV AR AF G PW +M R R++ R ADLIE++ LAALET +NGKPYV S
Sbjct: 61 KAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLV 120
Query: 158 EVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217
++ MV++ L YYAGWADK HG T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+
Sbjct: 121 DLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180
Query: 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDK 277
PAL GN +V+K AEQTPLTALYVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK
Sbjct: 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDK 240
Query: 278 LSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQ 337
++FTG + G+++Q A SNLK VTLELGGKSP II DAD+D AVE AHFALF+NQGQ
Sbjct: 241 VAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQ 300
Query: 338 CCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
C CAGSRT+V E +YDEFVE++ ARA R+VG+PF S EQGPQV
Sbjct: 301 CSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQV 345
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 614 bits (1586), Expect = 0.0
Identities = 136/364 (37%), Positives = 211/364 (57%), Gaps = 7/364 (1%)
Query: 26 LGRESSRARGISRFSTAAVVEEPIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRT 82
G + V+ +++ + I G+FVDA KT+ +P
Sbjct: 2 RGSHHHHHTTGEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTD 61
Query: 83 AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAAL 142
VI V+ D+D+AVA A++AF+ G W K+ +R R++ R AD++E++ EELA +
Sbjct: 62 GSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATI 121
Query: 143 ETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----GNYHIQTLHEPIGV 198
E + G Y +LK+ V M ++ Y+AGW DKI G T+P + T EP+GV
Sbjct: 122 EALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGV 181
Query: 199 AGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVV 258
G ++PWN+PL++ +WK A L GNT+V+K A+ TPLTAL A+L +AG+P GV+N++
Sbjct: 182 CGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNIL 241
Query: 259 SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDA 318
G G G L+ H DV K+ FTG + GK + + A SN+K V+LELGGKSP IIF D
Sbjct: 242 PGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADC 301
Query: 319 DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQ 378
D+++AV++ ++F+N+G+ C A R +V E ++++FV+K + +G+P +
Sbjct: 302 DLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNH 361
Query: 379 GPQV 382
GPQ
Sbjct: 362 GPQN 365
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 598 bits (1543), Expect = 0.0
Identities = 125/344 (36%), Positives = 199/344 (57%), Gaps = 3/344 (0%)
Query: 40 STAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDR 99
+ + + ++ + I+G++V++A+ T + +P EVI V+EG ED +R
Sbjct: 15 TENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAER 74
Query: 100 AVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEV 159
A+ AR+AF+ G W + T R + + AD I+++ E LA LET + GK +S +++
Sbjct: 75 AILAARRAFESGEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEES-YADM 133
Query: 160 PMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218
+ + Y+AG ADK G + + + + EP+GV QI PWN+PLL +WK+AP
Sbjct: 134 DDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAP 193
Query: 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL 278
AL G ++V+K +E TPLT + V +L E G P G +N++ G G G ++ H +VD +
Sbjct: 194 ALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLV 253
Query: 279 SFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQC 338
SFTG +TGK + + AA +N+ + LELGGK+P IIFDDAD + AV+ A +++ GQ
Sbjct: 254 SFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQV 312
Query: 339 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
C AGSR V + D+F + R + +G+ F + E GP +
Sbjct: 313 CSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVI 356
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 589 bits (1521), Expect = 0.0
Identities = 129/337 (38%), Positives = 182/337 (54%), Gaps = 9/337 (2%)
Query: 53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE-- 110
+ I + ING + K PV +P T +I ++ ED+D AVA A+ A
Sbjct: 3 IPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNK 62
Query: 111 -GPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
W + R+R + A + + ELA LE+ + GKP ++ ++ V YY
Sbjct: 63 GADWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYY 121
Query: 170 AGWADKIHGLTVP----GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNT 225
A A+K+ + L EPIGV G I PWN+P+L+ TWKVAPAL G
Sbjct: 122 ADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCA 181
Query: 226 IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285
+LK +E LT L + ++ E GLPPGVLN+++G GP AGA LA+H DVDK++FTG
Sbjct: 182 AILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSA 241
Query: 286 TGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRT 345
TG + AA+ +KPV+LELGGKSP ++F+D D+D+A E A F F+ GQ C A SR
Sbjct: 242 TGSKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRL 300
Query: 346 YVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+HE + EF+ + + DP + G GP V
Sbjct: 301 ILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVV 337
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 589 bits (1520), Expect = 0.0
Identities = 137/337 (40%), Positives = 197/337 (58%), Gaps = 5/337 (1%)
Query: 47 EPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARK 106
E + ++ + I G+FV + SG+TFP DP T EV+ A G ++DRA A +
Sbjct: 16 EEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHE 75
Query: 107 AFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLL 166
AF W + ER R +LR A+LIEK+ +ELA +E + G+ +++V
Sbjct: 76 AFQ--RWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIV-RAQVARAAENF 132
Query: 167 HYYAGWADK-IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNT 225
+YA +A+ + T P D ++ T+ P G G I PWN PL+L TW++APAL GNT
Sbjct: 133 AFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNT 192
Query: 226 IVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285
+VLK AE +P TA +A++ EA LPPGV N+V G+G AGAAL +H V L+ TG +
Sbjct: 193 VVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETE 252
Query: 286 TGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRT 345
TGKIV AA +LK ++ ELGGKSP ++F DAD+++A++ F +F G+ C A SR
Sbjct: 253 TGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRL 311
Query: 346 YVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
V E+++++FV K RA VG P E GP +
Sbjct: 312 LVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLI 348
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 588 bits (1519), Expect = 0.0
Identities = 138/346 (39%), Positives = 198/346 (57%), Gaps = 5/346 (1%)
Query: 40 STAAVVEEPIIPPVQIS-YTKNLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDI 97
+ + + P ++I + L++G+ VDAASG T P EV+ E A+D+
Sbjct: 4 LSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDV 63
Query: 98 DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
+AVA ARKAFD GPWP+M+ ERSR+M + ADLI EELA +E+ GKP Q+ +
Sbjct: 64 RKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQA-RG 122
Query: 158 EVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216
E+ L Y AG A + G T + L EP+GV G I PWNFP ++ + +V
Sbjct: 123 EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERV 182
Query: 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 276
A+ G T+VLK +E T T++ +A+L EAG+P GV NVV+GYG AG LA +VD
Sbjct: 183 PWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVD 242
Query: 277 KLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336
++FTG G + E+AA+ +K V LELGGK P I+F DAD+D A + + +++N G
Sbjct: 243 MVAFTGSVRVGTKLGEIAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAG 301
Query: 337 QCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
QCC +GSR V E + D +E+ + + GDP + G +
Sbjct: 302 QCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMI 347
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 583 bits (1505), Expect = 0.0
Identities = 129/344 (37%), Positives = 193/344 (56%), Gaps = 6/344 (1%)
Query: 40 STAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTF-PVYDPRTAEVIANVAEGDAEDID 98
+ V ++ N G+ + + G T PV++P T V+ + AE++D
Sbjct: 2 QLVDSMPSASTGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVD 61
Query: 99 RAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSE 158
+AV +A+ A+ W KM ERSR+ML AA +I + + +A LE NNGK ++ + +
Sbjct: 62 QAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEA-EYD 118
Query: 159 VPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218
+ + + YYAG A + G + G T EP+GV I+ WN+P ++ WK AP
Sbjct: 119 IDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178
Query: 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL 278
AL CGN +V K + TP+T + +A++FHEAG+P G++NVV G G G+ L H +V K+
Sbjct: 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKV 237
Query: 279 SFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQC 338
SFTG TGK V E++AK +K VTLELGGKSP +IF D +++ AV A A F QGQ
Sbjct: 238 SFTGSVPTGKKVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQV 296
Query: 339 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
C G+R +V + +F+E+ R +VGDP + G +
Sbjct: 297 CTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLI 340
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 579 bits (1496), Expect = 0.0
Identities = 126/333 (37%), Positives = 184/333 (55%), Gaps = 6/333 (1%)
Query: 51 PPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDE 110
P + I+G +V+ +G F P T E+IA + ++RA+A+A++A
Sbjct: 8 PLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQ-- 65
Query: 111 GPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYA 170
W M+P R RI+ RAAD++ + + L+ LET + GKP +++ ++ ++
Sbjct: 66 KEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFG 125
Query: 171 GWA-DKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229
G A ++G +P G++ T P+GV I WN+P + WK APAL GN +V K
Sbjct: 126 GIAPSALNGDYIPLGGDFAY-TKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFK 184
Query: 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289
+E TPL AL +A++ EAGLP G+ NV+ G T G L +H DV K+S TG TG+
Sbjct: 185 PSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRK 243
Query: 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
V AA +LK VT+ELGGKSP I+FDDAD++ AV A FY+ GQ C G+R +V +
Sbjct: 244 VAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQK 302
Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+ F+E K R I+GDP GP V
Sbjct: 303 KAKARFLENLKRRTEAMILGDPLDYATHLGPLV 335
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 571 bits (1475), Expect = 0.0
Identities = 129/346 (37%), Positives = 183/346 (52%), Gaps = 6/346 (1%)
Query: 38 RFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDI 97
+ + + K LING+ V G+ PVY+P T +V+ +AE AE +
Sbjct: 4 HHHHHHLESTSLYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQV 62
Query: 98 DRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKS 157
D AV A AF W + TP R+ +L+ AD+IE+N + A LE+ N GKP +
Sbjct: 63 DAAVRAADAAF--AEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFND 120
Query: 158 EVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216
E+P +V + ++AG A ++GL + +P+GV I PWN+PL++ WK+
Sbjct: 121 EIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180
Query: 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVD 276
APAL GN +VLK +E TPLTAL +A+L + P GV+N++ G G T G L H V
Sbjct: 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVR 239
Query: 277 KLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQG 336
+S TG TG+ + A S++K +ELGGK+P I+FDDAD++ VE +YN G
Sbjct: 240 MVSLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAG 298
Query: 337 QCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
Q C A R Y + +YD VEK A G P E GP
Sbjct: 299 QDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLS 344
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 567 bits (1463), Expect = 0.0
Identities = 125/344 (36%), Positives = 178/344 (51%), Gaps = 6/344 (1%)
Query: 40 STAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDR 99
S+ + + + T+ LI +F A + + +PRT I ++AE ID
Sbjct: 8 SSGVDLGTENLYFQSMMDTQLLIGSRFE-AGTEAEEHILNPRTGAGIIDLAEASHAQIDA 66
Query: 100 AVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEV 159
AV A +AF W + TP ERS +L+ AD IEK +E AALE N GKP E+
Sbjct: 67 AVDAAERAFV--GWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDEL 124
Query: 160 PMVVRLLHYYAGWADKIHGLTV-PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218
P ++ ++AG +H + +PIG+ G I PWN+PL++ WK+AP
Sbjct: 125 PAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP 184
Query: 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL 278
A+ GNT+V K +EQTPLTAL +A+L + LP GV+NV++G G T G AL +H V +
Sbjct: 185 AIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMV 243
Query: 279 SFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQC 338
S TG TGK V AAK +K LELGGK+P I++ DAD++ V +YN GQ
Sbjct: 244 SITGDIATGKKVLAAAAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQD 302
Query: 339 CCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
C A R Y +Y++ V + + E GP +
Sbjct: 303 CTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLI 346
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 523 bits (1349), Expect = 0.0
Identities = 123/328 (37%), Positives = 163/328 (49%), Gaps = 2/328 (0%)
Query: 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
Y K I G++ ++ V P T E + V A D+D AVA AR AFD GPWP
Sbjct: 6 TEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWP 65
Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
P+ER+ ++ A ++ + + L G+P + ++Y+AG AD
Sbjct: 66 STPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAAD 125
Query: 175 KIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
K+ EP+GV G IV WN PL L K+APAL G TIVLK A +T
Sbjct: 126 KVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
PLTA +A++F E GLP GVL+VV G G G AL S+ D+D +FTG G+ V A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
A+ LKP TLELGGKS II +D D+ A+ + F+ N GQ C +R YDE
Sbjct: 245 AE-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDE 303
Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQV 382
V VG P + GP +
Sbjct: 304 IVAAVTNFVTALPVGPPSDPAAQIGPLI 331
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 514 bits (1326), Expect = 0.0
Identities = 105/333 (31%), Positives = 167/333 (50%), Gaps = 12/333 (3%)
Query: 57 YTKNLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
+ING+ V + ++P R +++ +V++ + + ++A+ +A +AF W
Sbjct: 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRN 92
Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
+ P ER+ I+++AA +I + E +A GKP+ ++ ++ + L YYA +
Sbjct: 93 VNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIE 151
Query: 176 IH-GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
++ G + + + P+GV I PWNF L + + GNT+VLK A T
Sbjct: 152 LNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTT 211
Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
P+ A ++ +AGLP GV+N V G G G L H ++FTG D G + E A
Sbjct: 212 PVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271
Query: 295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
A ++LK V +E+GGK ++ DAD+D A E + F GQ C AGSR +H+
Sbjct: 272 AVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHK 331
Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
VYDE +EK A A VGDP GP +
Sbjct: 332 DVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVI 364
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 508 bits (1310), Expect = e-179
Identities = 114/341 (33%), Positives = 176/341 (51%), Gaps = 4/341 (1%)
Query: 42 AAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAV 101
+ + P ++ K ING + D ++ V DP T E A ++ G D D+A+
Sbjct: 10 GTLEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAI 69
Query: 102 ATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPM 161
A+KAF W +P+ER + + ++ EK ++A + G P +L ++
Sbjct: 70 NAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTAT 127
Query: 162 VVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALT 221
+ + + +GN ++ IGV G I PWN+P+ T KV PAL
Sbjct: 128 GSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALL 187
Query: 222 CGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFT 281
G T+VLK +E PL+A+ A++ EA LP GV N+++G G G+ L++H D++ +SFT
Sbjct: 188 AGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFT 247
Query: 282 GHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCA 341
G GK + + A+ LK V LELGGK IIF DAD+D A++ FYN GQ C A
Sbjct: 248 GSTRAGKDISKNASN-TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNA 305
Query: 342 GSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+R V + +YD+ ++ AK A + VG ++G GP V
Sbjct: 306 PTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVV 346
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 500 bits (1289), Expect = e-177
Identities = 113/328 (34%), Positives = 172/328 (52%), Gaps = 7/328 (2%)
Query: 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
YTK ING++V++ S +T V +P T EVI VA+G+ D+D+AV A + E +
Sbjct: 5 RDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FR 62
Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
+ ER ++ + E +++ T G P S + M + D
Sbjct: 63 HTSVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALD 122
Query: 175 KIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQT 234
GD + E IGV+G I PWNFP + K+A A G+ +VLK +E+T
Sbjct: 123 NYEFEERRGDD----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEET 178
Query: 235 PLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
P A+ +A++F + G+P GV N+V+G G G L+ H V +SFTG TG + E A
Sbjct: 179 PFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238
Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDE 354
AK + K V+LELGGKSP+I+ DD D+ +A + + N GQ C AG+R V ++ D
Sbjct: 239 AK-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDA 297
Query: 355 FVEKAKARAMRRIVGDPFKSGVEQGPQV 382
F+ + K + + VG+P + G + GP +
Sbjct: 298 FLAELKEQFSQVRVGNPREDGTQVGPII 325
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 496 bits (1279), Expect = e-174
Identities = 101/334 (30%), Positives = 163/334 (48%), Gaps = 14/334 (4%)
Query: 57 YTKNLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
+ I G++VD + + +P +EV+ A+ + + A+ A KAF W
Sbjct: 37 HYPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKD 92
Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
+RSR++L+AA L+ + EL A + GK +V++ ++V + + YYA A +
Sbjct: 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALR 151
Query: 176 IHGLTVPGDG--NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
V ++ + P+G I PWNFP+ +FT + + GNT++ K AE
Sbjct: 152 YRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAED 211
Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
+ V ++FHEAG PPGV+N + G G GA L H + ++FTG + G + E
Sbjct: 212 AVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271
Query: 294 AAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVH 348
A + + K +E GGK+ I+ + AD D A E + + QGQ C A SR +
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331
Query: 349 ERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+ Y+ +E+ RA R VG P + + GP V
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVV 364
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-168
Identities = 117/331 (35%), Positives = 167/331 (50%), Gaps = 6/331 (1%)
Query: 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWP 114
I TK+LI GQ+V+ S + +P VIA + D+D A A+KA W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQ--AEWA 67
Query: 115 KMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWAD 174
ERS I+ RAA+L+E++ EE+ +G ++ E+ + + A +
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPG 126
Query: 175 KIHGLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
++HG P + + GV G I PWNFPL L VAPAL GN +V+K A
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 234 TPLTALYV-AKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
TP+T + A++F EAG+P GV++ V+G G G +H +SFTG G+ V E
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 293 LAAKS-NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
LA +K V LELGG +PF++ DAD+D A + A F +QGQ C + +R V V
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+DEF+EK GDP G GP +
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVI 337
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 439 bits (1132), Expect = e-153
Identities = 95/347 (27%), Positives = 148/347 (42%), Gaps = 13/347 (3%)
Query: 41 TAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRA 100
A ++E I + + + G++ SG+ V P IA V E+++R
Sbjct: 2 RAGLLEGVIKEKGGVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERT 59
Query: 101 VATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVP 160
+ K M ER ++ +AAD+IE+N++ A + N GKP + EV
Sbjct: 60 LDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVK 117
Query: 161 MVVRLLHYYAGWADKIHGLTVPGDG-----NYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215
V L KI G +PGD EP+GV I P+N+PL K
Sbjct: 118 AAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNK 177
Query: 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDV 275
+ + GN +V+K + PL A K +AG PP + +++ G + + V
Sbjct: 178 ITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRV 236
Query: 276 DKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQ 335
+SFTG + G+ + +K +ELGG P I+ +DAD+D A + ++
Sbjct: 237 AAVSFTGSTEVGER---VVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYA 293
Query: 336 GQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
GQ C A VY + VE+ R VGDP V+ GP +
Sbjct: 294 GQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLI 340
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 439 bits (1131), Expect = e-152
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 13/331 (3%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
L NG++V++ +G+ + P + + ++ E+++ A+ A+ A W
Sbjct: 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKI--WKIRP 69
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
+ER ++ ADL+E+ E + L KP + EV ++ + A A +++
Sbjct: 70 IHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLN 128
Query: 178 GLTVPGD------GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
G T+ GD EP+GV I P+N+P+ L K+APAL GNT+V K A
Sbjct: 129 GETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPA 188
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
Q L+ + + + +AG P G++ VV+G G G L H +D ++FTG TG+
Sbjct: 189 TQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER-- 246
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
++ K+ + PV LELGGK P I+ DDAD+ F GQ C A R +V + V
Sbjct: 247 -ISEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSV 305
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
D+ V K + VG P + P +
Sbjct: 306 ADQLVANIKELVEQLTVGSPED-DADITPVI 335
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 433 bits (1117), Expect = e-150
Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 14/326 (4%)
Query: 61 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYE 120
I+G++++ + V +P + EVI + E+ A+ TA K + + +
Sbjct: 3 FIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEV--MKNLPITK 57
Query: 121 RSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLT 180
R I++ A I++ EELA + + GKP Q+ + EV + A + +
Sbjct: 58 RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEV 116
Query: 181 VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALY 240
+P D + I T EP+G+ G I P+NFPL L K+APA+ GN IV + + PL +
Sbjct: 117 IPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIE 175
Query: 241 VAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
+AK+ A +P GV N+++G G G + + V+ +SFTG G++ + K
Sbjct: 176 LAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGEL---ITKK 232
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+ K + LELGG +P I+ DAD+++AV F GQ C + V E + D+F+
Sbjct: 233 AGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFI 292
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQV 382
E +A VG+P + GP +
Sbjct: 293 EMFVNKAKVLNVGNPLDEKTDVGPLI 318
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 423 bits (1090), Expect = e-146
Identities = 78/343 (22%), Positives = 129/343 (37%), Gaps = 24/343 (6%)
Query: 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKM 116
KN + GQ++ A +G + DP T + V+ + +
Sbjct: 7 LLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGG--AALRAL 63
Query: 117 TPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI 176
T +R+ + L++ + A+ T N+G S ++ + L YYA +
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASL 122
Query: 177 HGLTVPGDGN----------YHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTI 226
+ DG+ L GVA I +NFP K APAL G +
Sbjct: 123 GEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPV 182
Query: 227 VLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCD 285
++K A T + +AG LPPG L+++ G ++ L D +SFTG D
Sbjct: 183 IVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSAD 239
Query: 286 TGKIVQELAAKS-NLKPVTLELGGKSPFIIFDDADV-----DQAVELAHFALFYNQGQCC 339
T ++ A + ++ + I+ DA D ++ + GQ C
Sbjct: 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKC 299
Query: 340 CAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
A R +V E + +E KA+ + VG+P V G V
Sbjct: 300 TAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLV 342
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 421 bits (1085), Expect = e-146
Identities = 99/327 (30%), Positives = 150/327 (45%), Gaps = 7/327 (2%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+ + I GQ++ A G+T DP V+ + DA +D AV AR+AF W +
Sbjct: 6 STHYIAGQWL-AGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPA--WARRP 62
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
+R ++ R A ++ +ELA + GKP +S +EV +V + +
Sbjct: 63 LEQRIELLERFAATLKSRADELARVIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERT 121
Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
G + H+P GV P+NFP L + PAL GN +V K +E TP
Sbjct: 122 GEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKV 181
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
A K + +AGLP GVLN+V G G G ALA+H +D L FTG TG ++
Sbjct: 182 AELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240
Query: 298 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY-DEFV 356
K + LE+GG +P ++ + AD+D AV + F + GQ C R V + + D +
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300
Query: 357 EKAKARAMRRIVGDPF-KSGVEQGPQV 382
+ A + VG + G +
Sbjct: 301 ARLVAVSATLRVGRFDEQPAPFMGAVI 327
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 388 bits (999), Expect = e-133
Identities = 114/325 (35%), Positives = 163/325 (50%), Gaps = 6/325 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
I+GQFV V +P T VI+ + +G AED +A+ A +A E W +
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPE--WEALP 64
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ER+ + + + I + E++AL GK + + EV + Y A WA +
Sbjct: 65 AIERASWLRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYE 123
Query: 178 GLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G + D +I +GV I+PWNFP L K+APAL GNTIV+K +E TP
Sbjct: 124 GEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPN 183
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
A+ AK+ E GLP GV N+V G G T G LA + V +S TG G+ + AA
Sbjct: 184 NAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA- 242
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
N+ V LELGGK+P I+ DDAD++ AV+ + N GQ C R YV + +YD+FV
Sbjct: 243 KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFV 302
Query: 357 EKAKARAMRRIVGDPF-KSGVEQGP 380
+ G+P ++ + GP
Sbjct: 303 NRLGEAMQAVQFGNPAERNDIAMGP 327
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 386 bits (995), Expect = e-132
Identities = 96/329 (29%), Positives = 161/329 (48%), Gaps = 15/329 (4%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
KN +NG++ S +Y+P + + +V E++D A+A+KA W ++
Sbjct: 5 YKNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALS 60
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ER+ + + AD++ ++ E++ A+ + K Y + SEV +++Y A ++
Sbjct: 61 YIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRME 119
Query: 178 GLTVPGDG------NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSA 231
G + G EP+G+ I P+N+P+ L K+APAL GN I K
Sbjct: 120 GEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPP 179
Query: 232 EQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291
Q ++ L +A+ F EAGLP GV N ++G G G + H V+ ++FTG G+
Sbjct: 180 TQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER-- 237
Query: 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV 351
+ + ++P+ LELGGK I+ +DAD++ + F GQ C A R V E V
Sbjct: 238 -IGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESV 296
Query: 352 YDEFVEKAKARAMRRIVGDPFKSGVEQGP 380
DE VEK + + + +G+P + P
Sbjct: 297 ADELVEKIREKVLALTIGNPED-DADITP 324
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 379 bits (975), Expect = e-129
Identities = 106/328 (32%), Positives = 165/328 (50%), Gaps = 7/328 (2%)
Query: 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPK 115
+ K+ ING++ SG+T + +P VI + + ++ A A+KA E W K
Sbjct: 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE--WAK 62
Query: 116 MTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK 175
T +R ++ +A + +N +++ + G ++S E+ + +L + +
Sbjct: 63 STTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKS-TIELEQTIAILDEAMTYTGE 121
Query: 176 IHGL-TVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
+ G+ VP D + P+GV I P+NFP+ L +APA+ GN++V K Q
Sbjct: 122 LGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQ 181
Query: 234 TPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
T ++ +AK F AGLP GVLNV+ G + ++ +SFTG G+ + E
Sbjct: 182 TAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
+A K + LELGG +PF + DADVD+AV+ A F F +QGQ C +R VH+ VY
Sbjct: 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGP 380
DEFVEK AR + GD GP
Sbjct: 301 DEFVEKFTARVKQLPYGDQTDPKTVVGP 328
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 359 bits (923), Expect = e-121
Identities = 114/324 (35%), Positives = 159/324 (49%), Gaps = 5/324 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
N I GQ+V + T + P T +VI + G D + A+ A+ A W K+T
Sbjct: 13 KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKA--WAKLT 70
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
R ++ A+ I +N LA + GK + + EV + + Y A I
Sbjct: 71 ARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVA-EMEVDVTATFIDYGCDNALTIE 129
Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G +P + + I P GV I WNFPL L K+ PAL GNT+VLK ++TPL
Sbjct: 130 GDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPL 189
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
+ ++ EAGLP GVLNV++G G G L ++ TG GK + + +A
Sbjct: 190 ATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA- 248
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+ PV LELGGK+P ++ DDAD+D+A E A + F N GQ C R YVH VYDEF+
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFM 308
Query: 357 EKAKARAMRRIVGDPFKSGVEQGP 380
K VGDP + + GP
Sbjct: 309 AKFLPLVKGLKVGDPMDADSQMGP 332
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 373 bits (959), Expect = e-121
Identities = 108/330 (32%), Positives = 162/330 (49%), Gaps = 12/330 (3%)
Query: 60 NLINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
ING+ V + P +P + +EV+ + + ++ A+A A+ AF W P
Sbjct: 534 LFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA--WRDTDP 589
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
R+ +L+AA K + EL+A + GK + Q+ ++V + L YYA ++
Sbjct: 590 RTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQ 648
Query: 179 -LTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
V +EP GVA I PWNFPL + + A+ GN +V K + T +
Sbjct: 649 PQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSII 708
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK- 296
++ +LF EAGLP GV N G G G L H D+ ++FTG +TG + E AAK
Sbjct: 709 GWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768
Query: 297 ----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
+N+K + E+GGK+ II DDAD+D+AV ++ F QGQ C A SR V + VY
Sbjct: 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVY 828
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
D+F+E+ + A VG G
Sbjct: 829 DKFIERLVSMAKATKVGPSEDPANYMGAVA 858
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 351 bits (904), Expect = e-118
Identities = 125/324 (38%), Positives = 187/324 (57%), Gaps = 5/324 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+ LING+++DA +G+ V +P + + +V + A++ A+ A +A W +T
Sbjct: 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA--WRALT 67
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ER+ I+ +L+ ++ ++LA L T GKP ++ K E+ + ++A +I+
Sbjct: 68 AKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIY 126
Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G T+PG + + + +PIGV I PWNFP + T K PAL G T+VLK A QTP
Sbjct: 127 GDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPF 186
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
+AL +A+L AG+P GV NVV+G G L S+ V KLSFTG + G+ + E A
Sbjct: 187 SALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA- 245
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
++K V+LELGG +PFI+FDDAD+D+AVE A + F N GQ C +R YV + VYD F
Sbjct: 246 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFA 305
Query: 357 EKAKARAMRRIVGDPFKSGVEQGP 380
EK + + +GD +GV GP
Sbjct: 306 EKLQQAMSKLHIGDGLDNGVTIGP 329
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 351 bits (904), Expect = e-118
Identities = 97/328 (29%), Positives = 152/328 (46%), Gaps = 12/328 (3%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+ + NG + G+ Y P E IA V + D + V AR+A+ W +
Sbjct: 24 NEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKI--WADIP 79
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
+R I+ + D + + ++ L +L + GK V+ EV V + Y G + I
Sbjct: 80 APKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIG 138
Query: 178 GLTVPGDGNYH-IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G +P + + H + P+G+ G I +NFP+ ++ W A A+ CGN + K A T L
Sbjct: 139 GPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSL 198
Query: 237 TALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
++ V K+ + LP + ++ G G G A+A V+ LSFTG GK V
Sbjct: 199 ISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
+ + LELGG + I F+DAD+ V A FA GQ C R ++HE ++
Sbjct: 258 MVQER-FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIH 316
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGP 380
DE V + K + VG+P+ V GP
Sbjct: 317 DEVVNRLKKAYAQIRVGNPWDPNVLYGP 344
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 351 bits (902), Expect = e-118
Identities = 130/324 (40%), Positives = 180/324 (55%), Gaps = 5/324 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+ I G++ A S TF V+DP T E + V + A + RA+ A+ A+ W T
Sbjct: 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAG--WRMKT 70
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ER+ I+ R DL+ N ++LA + T GKP ++ K E+ + ++A ++
Sbjct: 71 AKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVA 129
Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G T+P D N I + EPIGV I PWNFP + KV PAL G IV+K AE TP
Sbjct: 130 GDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPF 189
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
+AL +A L AG+P GVL+VV G G + S+ V KLSFTG G+++ +A
Sbjct: 190 SALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA- 248
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+K +TLELGG +PFI+FDDAD+D AVE A + + N GQ C +R +VHERVYD F
Sbjct: 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFA 308
Query: 357 EKAKARAMRRIVGDPFKSGVEQGP 380
+K A + VG +SG GP
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGP 332
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 351 bits (903), Expect = e-118
Identities = 108/324 (33%), Positives = 160/324 (49%), Gaps = 5/324 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
I G++ D+A G TF VY+P T VIA V ED+ AV + A
Sbjct: 12 LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRL--TNPWP 69
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
R + + D +++N EE+ + +GKP+ ++ + EV Y A +
Sbjct: 70 IETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEA-QGEVDYAAGFFDYCAKHISALD 128
Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
T+P + + P+GV G IVPWNFP+ + K++ AL G V+K A +TPL
Sbjct: 129 SHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPL 188
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
T + + + LP G++N+V G G L H DV LSFTG + G+ + A
Sbjct: 189 TMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA- 247
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+K + LELGG +PFI+FDDAD++ A + F GQ C +R +VHE+V D F
Sbjct: 248 EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFG 307
Query: 357 EKAKARAMRRIVGDPFKSGVEQGP 380
+K R + VGD G++ GP
Sbjct: 308 QKLAERVNKMTVGDGMNDGIDIGP 331
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 349 bits (899), Expect = e-117
Identities = 122/324 (37%), Positives = 182/324 (56%), Gaps = 5/324 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
++ L+NG+++DAA G T V +P VI V I A+ + KA W T
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSG--WAAKT 90
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ER+ I+ + DLI N +++A + T GKP ++ + EV + ++A A +++
Sbjct: 91 AKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVY 149
Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G T+P + + +P+GV I PWNFP + T K APAL G T++++ A+ TPL
Sbjct: 150 GDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPL 209
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
TAL + L +AG+P GVL +V+G GA L S+ V KLSFTG + G+++ A
Sbjct: 210 TALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA- 268
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
+K ++LELGG +PFI+FDDAD+D AV+ A + + N GQ C +R YV VYD+F
Sbjct: 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFA 328
Query: 357 EKAKARAMRRIVGDPFKSGVEQGP 380
EK A+ VG+ + GV GP
Sbjct: 329 EKLAAKVKELKVGNGTEPGVVIGP 352
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 338 bits (868), Expect = e-113
Identities = 63/336 (18%), Positives = 115/336 (34%), Gaps = 29/336 (8%)
Query: 67 VDAASGKTFPVYDPRTAEVIAN-VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIM 125
++ + F + T E + ++++A A K + + ++ +R+ ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLL 58
Query: 126 LRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD- 184
A +E +++ A P V+ L E+ L +A + D
Sbjct: 59 RTIASELEARSDDIIARAHLETALPEVR-LTGEIARTANQLRLFADVVNSGSYHQAILDT 117
Query: 185 --------GNYHIQTLHEPIGVAGQIVPWNFPLLLFT--WKVAPALTCGNTIVLKSAEQT 234
I+ +G NFPL A AL G +++K
Sbjct: 118 PNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH 177
Query: 235 PLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290
P T+ VA+ +A LP + ++ G G AL SH ++ + FTG G+ +
Sbjct: 178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRAL 237
Query: 291 QELAAKS-NLKPVTLELGGKSPFIIFDDADVDQA--VELAHFALFYNQGQCCCAGSRTYV 347
LA + P ELG +P IF A +A + ++ GQ C +
Sbjct: 238 FNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFA 297
Query: 348 HER-VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
F+E A++ P +
Sbjct: 298 LNTPETQAFIETAQSL------IRQQSPSTLLTPGI 327
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 336 bits (863), Expect = e-112
Identities = 116/328 (35%), Positives = 182/328 (55%), Gaps = 11/328 (3%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
T + + G+++ A TFPV DP + + VA+ + AV A +AF W +++
Sbjct: 13 TDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
ERS ++ + +L+ +N ++LA + T +GKP ++ E+ L +++ A +++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEA-HGEILYSAFFLEWFSEEARRVY 127
Query: 178 GLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G + + L +PIGVA I PWNFP + T KV AL G T+V+K AE TP
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 237 TALYVAKLFHEAGLPPGVLNVV---SGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
+AL +A+L +AG+P GV NV+ G A+ + V K+SFTG TGKI+
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
AA +++K V++ELGG +PFI+FD A+VDQAV A + F N GQ C ++ V ++D
Sbjct: 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306
Query: 354 EFVEKAKARAMRRI-VGDPFKSGVEQGP 380
FV+ + + VG+ F+ G QGP
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGP 334
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 302 bits (776), Expect = 1e-99
Identities = 88/320 (27%), Positives = 139/320 (43%), Gaps = 7/320 (2%)
Query: 69 AASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA 128
+ +P T + +A + +A++I+ A++ A F + W + +R++ +
Sbjct: 3 MMTATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKK--WKMTSVAQRAQTLRDI 60
Query: 129 ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYH 188
+ + EE+A T GKP Q+ ++EV L +YA + N
Sbjct: 61 GQALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQ 119
Query: 189 IQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA 248
+ P+GV I+PWNFPL P L GN+ +LK A A +A++ EA
Sbjct: 120 AVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEA 179
Query: 249 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGG 308
G P GV V+ + + ++ TG G + A LK LELGG
Sbjct: 180 GTPAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGG 237
Query: 309 KSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368
PFI+ +DAD++ AV+ A + N GQ C A R V E + F ++ A A +
Sbjct: 238 SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKM 297
Query: 369 GDPFKSGVEQGPQVLFSADL 388
GDP + GP + DL
Sbjct: 298 GDPLVEENDLGP--MARFDL 315
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 301 bits (773), Expect = 8e-99
Identities = 93/315 (29%), Positives = 137/315 (43%), Gaps = 7/315 (2%)
Query: 74 TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133
+ +P T E A+ ++ ID A+ A + + W P R+ I+ A+ ++
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALK 62
Query: 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH 193
++ +ELA + T GK +S K EV + V + +YYA ++ T + L
Sbjct: 63 EHEDELAKMMTLEMGKLLSES-KEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLK 121
Query: 194 EPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG 253
+ GV PWNFPL AP GN I+LK A P +A AK+ AG P G
Sbjct: 122 QSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEG 181
Query: 254 VLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313
L + +A + ++ TG G V E A K NLK T+ELGG FI
Sbjct: 182 SLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239
Query: 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373
+ DDAD + + A YN GQ C + R V + YDE + + K GDP +
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299
Query: 374 SGVEQGPQVLFSADL 388
+ P + S
Sbjct: 300 ADTTLPP--MNSEKA 312
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 299 bits (767), Expect = 3e-98
Identities = 62/298 (20%), Positives = 109/298 (36%), Gaps = 14/298 (4%)
Query: 89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNG 148
+ + ++D +A +KA +E + + + +I A+ + LA +G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEE--FATYSQEQVDKIFRAASLAANQARIPLAQQAVEESG 58
Query: 149 KPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFP 208
V+ K Y ++ G + D N T+ EP+G+ IVP P
Sbjct: 59 MGIVED-KVIKNHFASEFIYNKYKDEQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNP 116
Query: 209 LLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPT 264
+K +L N I+ + + AKL +A G P ++ +
Sbjct: 117 TSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVE 176
Query: 265 AGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAV 324
AL H D+ + TG K AA S+ KP G P +I + AD+ +AV
Sbjct: 177 LSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDETADIKRAV 231
Query: 325 ELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+ ++ G C + V + VYDE E+ + + V + +
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADK-VRKVLLI 288
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 288 bits (738), Expect = 4e-93
Identities = 81/345 (23%), Positives = 128/345 (37%), Gaps = 29/345 (8%)
Query: 58 TKNLINGQFVDAA-SGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKM 116
K+L+ G+++D A + + P + P + G E ++RA A +AF +
Sbjct: 30 GKHLVAGEWLDGAGTFASAPAHGPAHDFAV-----GTVELVNRACEAAEEAFWT--YGYS 82
Query: 117 TPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG----- 171
+ ER+ + AD IE E + + + G P + L E L +A
Sbjct: 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEAR-LNGERGRTTGQLRLFADHIEKG 141
Query: 172 -WADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT--WKVAPALTCGNT 225
+ D+ +P I+ + P+G NFPL T A AL G
Sbjct: 142 DYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCP 201
Query: 226 IVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFT 281
+V+K P T VA+ A G+ PGV +++ G G AL H + + FT
Sbjct: 202 VVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261
Query: 282 GHCDTGKIVQELAAKS-NLKPVTLELGGKSPFIIFDDADVDQAVELAHFA---LFYNQGQ 337
G G+ + +L A P ELG +P + +A +A L L GQ
Sbjct: 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQ 321
Query: 338 CCCAGSRTYVHERV-YDEFVEKAKARAMRRIVGDPFKSGVEQGPQ 381
C V E D F A + G+ + +
Sbjct: 322 FCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYR 366
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 280 bits (719), Expect = 3e-86
Identities = 94/319 (29%), Positives = 132/319 (41%), Gaps = 8/319 (2%)
Query: 66 FVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIM 125
F + + +A+ + AVA AR F W + R+ +
Sbjct: 521 FGARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARAGFAG--WSRTPAGIRAAAL 578
Query: 126 LRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG--LTVPG 183
+AA L+E AL GK +L SE+ YYA K+ G +PG
Sbjct: 579 EQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAAQGRKLFGSETAMPG 637
Query: 184 DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK 243
GV I PWNFPL +F +V AL GN++V K AEQTP A
Sbjct: 638 PTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVA 697
Query: 244 LFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN--LKP 301
L HEAG+P L +V+G G GAAL +H D+ + FTG + + + A + + P
Sbjct: 698 LLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVP 756
Query: 302 VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
+ E GG + I A +Q + + F + GQ C A +V E V D +E
Sbjct: 757 LIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAG 816
Query: 362 RAMRRIVGDPFKSGVEQGP 380
A +GDP GP
Sbjct: 817 AARELKIGDPSDVATHVGP 835
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 250 bits (642), Expect = 3e-79
Identities = 106/326 (32%), Positives = 165/326 (50%), Gaps = 6/326 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
KN ING++V++ + + V +P T EV+ V EDID A TA +AF W K+
Sbjct: 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKT--WSKVA 63
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
R+RI+ L+ ++ EELA L T NGK ++ EV + + + AG +
Sbjct: 64 VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMM 122
Query: 178 GLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G ++ + PIGV G I P+NFP+++ W A+ GNT +LK +E+TPL
Sbjct: 123 GDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPL 182
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
+ +LF +AGLP GV NVV G + H ++ +SF G G+ V + ++
Sbjct: 183 LTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
NLK V G K+ I+ +DA+++ V A F + G+ C A + V E + DEF+
Sbjct: 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQV 382
K + + +G+ GV GP +
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVI 326
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 243 bits (622), Expect = 6e-76
Identities = 97/327 (29%), Positives = 155/327 (47%), Gaps = 7/327 (2%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
+ I+G+ V SG+ +++P T EV VA D+ AV +A+ A + W
Sbjct: 27 LGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPK--WAATN 84
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
P R+R+ ++ L+ NM ELA + + +GK + K ++ + + + G
Sbjct: 85 PQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPHLQK 143
Query: 178 GLTVPGDG-NYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
G G + ++ +P+G+ I P+NFP ++ W APA+ CGN +LK +E+ P
Sbjct: 144 SEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPS 203
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
+ +A+L EAGLP G+LNVV+G A A+ +H D+ +SF G + V AA
Sbjct: 204 VPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM 262
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRT-YVHERVYDEF 355
N K G K+ II DAD+DQA A + + G+ C A S V E +
Sbjct: 263 -NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRL 321
Query: 356 VEKAKARAMRRIVGDPFKSGVEQGPQV 382
++K +G + GP V
Sbjct: 322 IDKLVPMVESLRIGPYTDEKADMGPVV 348
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 239 bits (612), Expect = 5e-75
Identities = 51/281 (18%), Positives = 98/281 (34%), Gaps = 15/281 (5%)
Query: 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154
+++ + +A KA E M+ + I+ AD E+LA + G Q
Sbjct: 12 QEVRNLIESANKAQKE--LAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQD 69
Query: 155 LKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213
+V V + + + + + D + + P+GV ++P P
Sbjct: 70 ---KVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVI 126
Query: 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE----AGLPPGVLNVVSGYGPTAGAAL 269
+K ++ GN+IV L ++ E AG P G ++ ++ L
Sbjct: 127 YKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQL 186
Query: 270 ASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHF 329
H D + TG K AA S+ P G P I A++ +AV+
Sbjct: 187 MKHKDTAVILATGGSAMVK-----AAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILD 241
Query: 330 ALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370
+ ++ G C + V + + + + + +
Sbjct: 242 SKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDA 282
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 229 bits (587), Expect = 3e-70
Identities = 78/319 (24%), Positives = 132/319 (41%), Gaps = 13/319 (4%)
Query: 61 LINGQFVDAASGKTFPVYDP-RTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPY 119
++ + V + P A +A D ++RA+ A A E W
Sbjct: 67 VVGDEEVW--TSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKE--WDLKPMA 122
Query: 120 ERSRIMLRAADLIE-KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI-H 177
+R+++ L+AAD++ E+ A GK +Q+ ++ + A +A ++
Sbjct: 123 DRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEG 182
Query: 178 GLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLT 237
+ + + G I P+NF + APAL GN ++ K ++ L
Sbjct: 183 EQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLA 241
Query: 238 ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS 297
+ V ++ EAGLPP ++ V GPT G + S + ++FTG T K + A++
Sbjct: 242 SYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQN 301
Query: 298 -----NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
+ E GGK+ + ADVD V + F GQ C A SR YV + ++
Sbjct: 302 LDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLW 361
Query: 353 DEFVEKAKARAMRRIVGDP 371
+ + R VGDP
Sbjct: 362 PQIKGRLLEEHSRIKVGDP 380
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 3e-47
Identities = 86/289 (29%), Positives = 121/289 (41%), Gaps = 20/289 (6%)
Query: 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEEL-AALETWNNGKPYV 152
I AV AR AF G + P + L A LI++ +EL AL + K
Sbjct: 18 SKISEAVKRARAAFSSG---RTRPLQFRIQQLEALQRLIQEQEQELVGALAA-DLHKNEW 73
Query: 153 QSLKSEVPMVVRLLHYY----AGWA--DKIH-GLTVPGDGNYHIQTLHEPIGVAGQIVPW 205
+ EV V+ + Y WA + + D Y EP+GV I W
Sbjct: 74 NAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELY---IHSEPLGVVLVIGTW 130
Query: 206 NFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTA 265
N+P L + A+ GN +VLK +E + A +A + + L + V++G G
Sbjct: 131 NYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPE 188
Query: 266 GAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVE 325
L D + +TG GKI+ AAK +L PVTLELGGKSP + + D+D A
Sbjct: 189 TTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACR 246
Query: 326 LAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374
+ F N GQ C A + ++ VEK K D KS
Sbjct: 247 RIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKS 295
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 3e-44
Identities = 83/288 (28%), Positives = 122/288 (42%), Gaps = 20/288 (6%)
Query: 93 DAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA-ADLIEKNMEEL-AALETWNNGKP 150
ID + + F + L + + N E L +AL + GKP
Sbjct: 26 SPAKIDSLFSAQKAYFATRATA---DVGFRKQSLERLKEAVINNKEALYSALAE-DLGKP 81
Query: 151 YVQSLKSEVPMVVRLLHYY----AGWA--DKIH-GLTVPGDGNYHIQTLHEPIGVAGQIV 203
+E+ V+ + + W + + Y + EP GV I
Sbjct: 82 KDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECY---VVQEPYGVTYIIG 138
Query: 204 PWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGP 263
P+N+P+ L + A+ GNT ++K +E TP T+ + K+ EA P + V+ G G
Sbjct: 139 PFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GR 196
Query: 264 TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA 323
+ L S D + FTG + GK+V + AAK +L PV LELGGK P I+ DAD+DQ
Sbjct: 197 DENSHLLSL-PFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGGKCPLIVLPDADLDQT 254
Query: 324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371
V F F N GQ A YVH V D +E+ R +
Sbjct: 255 VNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN 302
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 4e-08
Identities = 59/426 (13%), Positives = 123/426 (28%), Gaps = 135/426 (31%)
Query: 5 RRISTLLSRSFPSA--------SPSLLRSLGRES-----SRARGISRFSTAAVVEEPIIP 51
RR+ L S+ + + + + +R + ++ F +AA +
Sbjct: 235 RRL--LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292
Query: 52 PVQISYTKNLINGQFVDAASGKTFPVYD-PRTAE-----VIANVAEGDAEDIDRAVATAR 105
++ T + + + + D PR ++ +AE + +
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQ---DLPREVLTTNPRRLSIIAESIRDGLAT------ 343
Query: 106 KAFDEGPWPKMTPYERSRIM------LRAADLIEKNMEELA-----------ALET-WNN 147
+D W + + + I+ L A+ K + L+ L W +
Sbjct: 344 --WD--NWKHVNCDKLTTIIESSLNVLEPAEY-RKMFDRLSVFPPSAHIPTILLSLIWFD 398
Query: 148 GKPYVQSLKSEVPMVVRLLHYY---AGWADK----IHGL----TVPGDGNYHIQTLHEPI 196
+V +VV LH Y + I + V + Y LH I
Sbjct: 399 VIKS------DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY---ALHRSI 449
Query: 197 GVAGQIVPWNFPLLLFTWKVAPALTCG---NTIV--LKSAEQTPLTALYVAKLFHEAGLP 251
+ +N P + + P + I LK+ E L+ +F
Sbjct: 450 -----VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF-RMVF------ 497
Query: 252 PGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE---LAAKSNLKPVTLELGG 308
L+ F KI + A ++ +L
Sbjct: 498 ---LD---------------------FRFLE----QKIRHDSTAWNASGSILNTLQQLKF 529
Query: 309 KSPFIIFDDADVDQAV-ELAHFALFYNQGQCCCAGSRTYVH-------ERVYDEFVEKAK 360
P+I +D ++ V + F + C+ + E +++E
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPKIEE-NLICSKYTDLLRIALMAEDEAIFEE-----A 583
Query: 361 ARAMRR 366
+ ++R
Sbjct: 584 HKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 3e-05
Identities = 44/331 (13%), Positives = 93/331 (28%), Gaps = 110/331 (33%)
Query: 51 PPVQISYTKNLINGQFVDAASGKTFP--------VYDPRTAEVIANVAEGDAEDID-RAV 101
++I + + K + V + + +A ++ + +
Sbjct: 223 IKLRIHSIQAELRRLLKS----KPYENCLLVLLNVQNAKAW---------NAFNLSCKIL 269
Query: 102 ATARKAFDEGPWPKMTPYERSRIML--RAADLIEKNMEELAALETWNNGKPYVQSLKSEV 159
T R + ++ + I L + L ++ L L + + +P Q L EV
Sbjct: 270 LTTR---FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL--LLKYLDCRP--QDLPREV 322
Query: 160 ----PMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215
P + ++ A+ I DG W+ + K
Sbjct: 323 LTTNPRRLSII------AESIR------DGLAT----------------WDNWKHVNCDK 354
Query: 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGL-------PPGVLNVVSGYGPTAGAA 268
+ TI+ S L K+F + P +L+++ +
Sbjct: 355 L-------TTIIESSLNV--LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS--- 402
Query: 269 LASHMDVDKLSFTGHCDTGKIVQELAAKS----NLKPVTLELGGKSPFIIFD-DADVDQA 323
D +V +L S K T+ + P I + ++
Sbjct: 403 ----------------DVMVVVNKLHKYSLVEKQPKESTISI----PSIYLELKVKLENE 442
Query: 324 VELAHFAL--FYNQGQCCCAGSRTYVHERVY 352
L H ++ YN + + + Y
Sbjct: 443 YAL-HRSIVDHYNIPKTFDSDDLIPPYLDQY 472
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 393 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 94.85 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 82.31 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-78 Score=610.25 Aligned_cols=329 Identities=42% Similarity=0.703 Sum_probs=315.1
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
+...++||||+|+++.++++++++||.||++|++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999988899999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
+.++|++++++|+|||+.+++..|+..+++.++||+++.+++.+...+...+...++.++|+|||++|+|||||+...++
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999999866799999999999999999888877766677789999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999998766
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
+..++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 55589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||||++.
T Consensus 322 ~~~~Gpli~~~ 332 (490)
T 2wme_A 322 NTNFGPLVSFP 332 (490)
T ss_dssp TCCBCCCSCHH
T ss_pred cCccCCcCCHH
Confidence 99999999853
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-74 Score=585.04 Aligned_cols=342 Identities=37% Similarity=0.616 Sum_probs=316.5
Q ss_pred CcccccccccccccCCCCCCCcCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhc--cc
Q 016216 33 ARGISRFSTAAVVEEPIIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAF--DE 110 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~--~~ 110 (393)
.-|++.|+.+-++- .+...++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++|| +
T Consensus 15 ~~~~~~~~~~m~~~-------~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~- 86 (520)
T 3ed6_A 15 TENLYFQSNAMELL-------KHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG- 86 (520)
T ss_dssp ----CHHHHHHHHG-------GGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT-
T ss_pred CCCccccccccccc-------cccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc-
Confidence 34677666542211 1223478999999988788999999999999999999999999999999999999 7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceE
Q 016216 111 GPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHI 189 (393)
Q Consensus 111 g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~ 189 (393)
.|+.++..+|.++|+++++.|+++.++|+++++.|+|||+.+++. |+..+++.++|++++++++.+...+.. .+...
T Consensus 87 -~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~ 164 (520)
T 3ed6_A 87 -EWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTES 164 (520)
T ss_dssp -TTTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEE
T ss_pred -ccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcc
Confidence 999999999999999999999999999999999999999999985 999999999999999988777655543 45678
Q ss_pred EEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHH
Q 016216 190 QTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAAL 269 (393)
Q Consensus 190 ~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L 269 (393)
++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|.+.++++.|
T Consensus 165 ~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L 244 (520)
T 3ed6_A 165 KIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVM 244 (520)
T ss_dssp EEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHH
T ss_pred cccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred HcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcC
Q 016216 270 ASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349 (393)
Q Consensus 270 ~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~ 349 (393)
+.||+||.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+
T Consensus 245 ~~~p~vd~V~FTGS~~vG~~i~~~aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~ 323 (520)
T 3ed6_A 245 SGHKEVDLVSFTGGIETGKHIMKNAAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQN 323 (520)
T ss_dssp HHCTTCSEEEEESCHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEH
T ss_pred HhCCCcCEEEEECCHHHHHHHHHHhhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcH
Confidence 999999999999999999999999997 8999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 350 ~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++||+|+++|+++++++++|||+|+++++||++++.
T Consensus 324 ~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~ 359 (520)
T 3ed6_A 324 SIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTE 359 (520)
T ss_dssp HHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHH
Confidence 999999999999999999999999999999999753
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-73 Score=579.97 Aligned_cols=326 Identities=34% Similarity=0.555 Sum_probs=312.7
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKEN 87 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 445889999999887889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEE-ecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLH-EPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+++++.|+|||..+++ .|+..+++.++|++++++++.+...+...+...++.+ +|+|||++|+|||||+...++
T Consensus 88 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 166 (506)
T 3rh9_A 88 REEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAK 166 (506)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHH
Confidence 99999999999999999998 5999999999999999998877666544456678889 999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|.+.+.++.|+.|++||.|+||||+.+|+.|++.+
T Consensus 167 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~a 246 (506)
T 3rh9_A 167 KLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDT 246 (506)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 247 a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 325 (506)
T 3rh9_A 247 AE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMND 325 (506)
T ss_dssp TT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTST
T ss_pred hh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||++++.
T Consensus 326 ~~~~Gpli~~~ 336 (506)
T 3rh9_A 326 GIDIGPLINKQ 336 (506)
T ss_dssp TCSBCCCSCHH
T ss_pred CCcccccCCHH
Confidence 99999999853
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-73 Score=580.23 Aligned_cols=325 Identities=39% Similarity=0.624 Sum_probs=311.0
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
++|+++++.|+|||+.+++. |+..+++.++||+.+.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999985 999999999999999888776655533 4567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|.+.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++|||+++.
T Consensus 328 ~~~Gpli~~~ 337 (484)
T 3ifg_A 328 ATLGPLINEA 337 (484)
T ss_dssp CCBCCCSSHH
T ss_pred CCCCCCcCHH
Confidence 9999999864
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-73 Score=581.84 Aligned_cols=326 Identities=41% Similarity=0.769 Sum_probs=309.0
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+.|.|+.++.++|.++|+++++.|+++.++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 68999999986667899999999999999999999999999999999999855699999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC----CCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG----DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
|++++++|+|||+.+++..|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 999999999999999874599999999999999998877665543 2233578899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.++++.|+.|++|+.|+||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred h-hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCC
Q 016216 295 A-KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (393)
Q Consensus 295 a-~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~ 373 (393)
+ + ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|
T Consensus 278 a~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 278 ALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred HHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8 6 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCcccccC
Q 016216 374 SGVEQGPQVLFS 385 (393)
Q Consensus 374 ~~~~~Gpli~~~ 385 (393)
+++++||||++.
T Consensus 357 ~~~~~Gpli~~~ 368 (517)
T 2o2p_A 357 RDTNHGPQNHEA 368 (517)
T ss_dssp TTCCBCCCSSHH
T ss_pred CCCccCCCcCHH
Confidence 999999999864
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-73 Score=577.54 Aligned_cols=328 Identities=38% Similarity=0.573 Sum_probs=310.8
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
.+.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.|.|+.++.++|.++|+++++.|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44578999999987677899999999999999999999999999999999999755799999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
.++|++++++|+|||+.+++..|+..+++.++|++++++++.+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999987459999999999999999888776554333446788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+.++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8889999999999999999999999999999999
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|++
T Consensus 246 ~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 E-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp H-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred h-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 325 ~~~gpli~~~ 334 (495)
T 3b4w_A 325 AQIGPLISEK 334 (495)
T ss_dssp CCBCCCSCHH
T ss_pred CccCCCcCHH
Confidence 9999999864
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-73 Score=576.61 Aligned_cols=326 Identities=54% Similarity=0.970 Sum_probs=309.6
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g-~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.| .|+.++.++|.++|+++++.|+++.+
T Consensus 22 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (501)
T 1bxs_A 22 KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRL 101 (501)
T ss_dssp SEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 67999999987678899999999999999999999999999999999999743 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
+|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 102 ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 181 (501)
T 1bxs_A 102 LLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIG 181 (501)
T ss_dssp HHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHHH
Confidence 99999999999999887667999999999999999988877655544455678899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh-h
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-K 296 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a-~ 296 (393)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|++.++ +
T Consensus 182 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~ 261 (501)
T 1bxs_A 182 PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKS 261 (501)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999988889999999999999999999999999999998 6
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++
T Consensus 262 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 340 (501)
T 1bxs_A 262 -NLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 340 (501)
T ss_dssp -TCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTC
T ss_pred -cCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||+|++.
T Consensus 341 ~~Gpli~~~ 349 (501)
T 1bxs_A 341 SQGPQIDKE 349 (501)
T ss_dssp CBCCCSCHH
T ss_pred ccCCCcCHH
Confidence 999999864
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-73 Score=578.97 Aligned_cols=325 Identities=38% Similarity=0.640 Sum_probs=310.9
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
++|+++++.|+|||+.+++. |+..+++.++||+.+.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999885 999999999999999988776655433 3567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 348 ~~~Gpli~~~ 357 (504)
T 3ek1_A 348 VVIGPMIEEK 357 (504)
T ss_dssp CCBCCCSSHH
T ss_pred CccccccCHH
Confidence 9999999864
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-73 Score=575.83 Aligned_cols=336 Identities=34% Similarity=0.517 Sum_probs=306.6
Q ss_pred ccCCCCCCCcC-CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 016216 45 VEEPIIPPVQI-SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSR 123 (393)
Q Consensus 45 ~~~~~~~~~~~-~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~ 123 (393)
++.++..+-.| ...++||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++..+|.+
T Consensus 12 ~~~~~~~~~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~ 89 (497)
T 3i44_A 12 LEAQTQGPGSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLG 89 (497)
T ss_dssp ----------CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHH
T ss_pred hhhhhcCCcccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHH
Confidence 34455555554 456899999999887888999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEE-EecceeEEEE
Q 016216 124 IMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTL-HEPIGVAGQI 202 (393)
Q Consensus 124 ~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i 202 (393)
+|+++++.|+++.++|+++++.|+|||+.+++..|+..+++.++++++..+.......+. .+...++. ++|+|||++|
T Consensus 90 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I 168 (497)
T 3i44_A 90 FVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLI 168 (497)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEE
Confidence 999999999999999999999999999999985699999999999998876654332221 13345667 9999999999
Q ss_pred CCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeC
Q 016216 203 VPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTG 282 (393)
Q Consensus 203 ~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftG 282 (393)
+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+++|.+.++++.|+.||+||.|+|||
T Consensus 169 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTG 248 (497)
T 3i44_A 169 TPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTG 248 (497)
T ss_dssp CCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEES
T ss_pred CCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred ChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHH
Q 016216 283 HCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKAR 362 (393)
Q Consensus 283 s~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~ 362 (393)
|+.+|+.|++.+++ ++||+++|||||||+||++||| |.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++
T Consensus 249 S~~~G~~i~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 326 (497)
T 3i44_A 249 STRAGKDISKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDI 326 (497)
T ss_dssp CHHHHHHHHHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHH
Confidence 99999999999987 8999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HhcCccCCCCCCCCccCcccccC
Q 016216 363 AMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 363 ~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
++++++|||+|+++++|||+++.
T Consensus 327 ~~~~~vG~p~~~~~~~Gpli~~~ 349 (497)
T 3i44_A 327 AEKTQVGPGHQTGNHIGPVVSKE 349 (497)
T ss_dssp HHHCCBCCTTSCSSCBCCCSCHH
T ss_pred HHhccCCCCCCCCCccCCCcCHH
Confidence 99999999999999999999754
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-72 Score=575.49 Aligned_cols=325 Identities=39% Similarity=0.688 Sum_probs=308.2
Q ss_pred CcccceeCCeeeeCCCCCe-eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 56 SYTKNLINGQFVDAASGKT-FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
...++||||+|+.+.++++ ++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999998766788 99999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
+.++|+++++.|+|||+.+++ .|+..+++.++||+++.+++.+...+...+...++.++|+|||++|+|||||+...++
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 174 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHH
Confidence 999999999999999999987 4999999999999999988766544433344678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+ ++++.|+.|++||.|+||||+.+|+.|++.+
T Consensus 175 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 253 (503)
T 1a4s_A 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999977 8999999999999999999999999999999
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 254 a~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 254 AK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 97 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||++++.
T Consensus 333 ~~~~gpli~~~ 343 (503)
T 1a4s_A 333 ETRMGGLISKP 343 (503)
T ss_dssp TCCBCCCSCHH
T ss_pred CCccCCCcCHH
Confidence 99999999863
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-73 Score=575.22 Aligned_cols=328 Identities=35% Similarity=0.550 Sum_probs=312.8
Q ss_pred cCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016216 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133 (393)
Q Consensus 54 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~ 133 (393)
..+..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 9 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 86 (497)
T 3k2w_A 9 HFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKIR 86 (497)
T ss_dssp CCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34556899999999887789999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHH
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
++.++|+++++.|+|||..+++ .|+..+++.++|++.+.+++.+...+. ..+...++.++|+|||++|+|||||+...
T Consensus 87 ~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 165 (497)
T 3k2w_A 87 ENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALA 165 (497)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHH
Confidence 9999999999999999999998 499999999999999998887665543 24567889999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+++|.+.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~ 245 (497)
T 3k2w_A 166 GRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYK 245 (497)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+
T Consensus 246 ~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~ 324 (497)
T 3k2w_A 246 TSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324 (497)
T ss_dssp HHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTT
T ss_pred Hhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++||++++.
T Consensus 325 ~~~~~~gpli~~~ 337 (497)
T 3k2w_A 325 DADSQMGPKCNQR 337 (497)
T ss_dssp STTCSBCCCSCHH
T ss_pred CCCCccccCcCHH
Confidence 9999999999853
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-72 Score=574.31 Aligned_cols=329 Identities=40% Similarity=0.687 Sum_probs=310.6
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG---PWPKMTPYERSRIMLRAADL 131 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g---~W~~~~~~~R~~~L~~~a~~ 131 (393)
+...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.| .|+.++.++|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344589999999988788999999999999999999999999999999999999743 79999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccc-c---CCCCceEEEEEecceeEEEECCCCc
Q 016216 132 IEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV-P---GDGNYHIQTLHEPIGVAGQIVPWNF 207 (393)
Q Consensus 132 l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~-~---~~~~~~~~~~~~P~Gvv~~i~p~N~ 207 (393)
|+++.++|+++++.|+|||+.+++. |+..+++.++|++.+++++.+... + ...+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 9999999999999999999999975 999999999999999988765431 1 1235678899999999999999999
Q ss_pred cHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHH
Q 016216 208 PLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTG 287 (393)
Q Consensus 208 P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 287 (393)
|+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.+.++.|+.|++||.|+||||+++|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCc
Q 016216 288 KIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI 367 (393)
Q Consensus 288 ~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~ 367 (393)
+.|++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999987 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCcccccC
Q 016216 368 VGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 368 ~G~p~~~~~~~Gpli~~~ 385 (393)
+|||+++++++|||+++.
T Consensus 323 ~g~p~~~~~~~gpli~~~ 340 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEG 340 (503)
T ss_dssp BSCTTSTTCCBCCCSCHH
T ss_pred CCCCCCCCCcccCccCHH
Confidence 999999999999999853
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-72 Score=576.73 Aligned_cols=325 Identities=41% Similarity=0.661 Sum_probs=311.5
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAF--DEGPWPKMTPYERSRIMLRAADLIE 133 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~--~~g~W~~~~~~~R~~~L~~~a~~l~ 133 (393)
..++||||+|+.+.++++++++||.| |+++++++.++.+|+++++++|++|| . .|+.++.++|.++|+++++.|+
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLIL 99 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHHH
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence 45799999999887889999999999 99999999999999999999999999 6 8999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHH
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
++.++|+++++.|+|||..+++ .|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 100 ~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 100 ARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHH
Confidence 9999999999999999999995 6999999999999999988877666544 4667889999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|.+.++++.|+.|++||.|+||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 258 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGE 258 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCC
Q 016216 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 293 ~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+
T Consensus 259 ~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 337 (528)
T 3u4j_A 259 IAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPL 337 (528)
T ss_dssp HHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTT
T ss_pred HHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCC
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++||++++.
T Consensus 338 ~~~~~~Gpli~~~ 350 (528)
T 3u4j_A 338 NERTKIGAMISEA 350 (528)
T ss_dssp STTCSBCCCSCHH
T ss_pred CcCCccCCccCHH
Confidence 9999999999864
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-73 Score=575.61 Aligned_cols=326 Identities=61% Similarity=1.017 Sum_probs=308.9
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g-~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+.| .|+.++.++|.++|+++++.|+++.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999987678899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVA 217 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~ 217 (393)
+|+++++.|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+...+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987667999999999999999988776655544455678899999999999999999999999999
Q ss_pred HHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh-h
Q 016216 218 PALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA-K 296 (393)
Q Consensus 218 ~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a-~ 296 (393)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+++|.+.++++.|+.|++||.|+||||+.+|+.|++.++ +
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999977889999999999999999999999999999998 6
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++
T Consensus 261 -~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 261 -NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp -TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||||++.
T Consensus 340 ~~Gpli~~~ 348 (500)
T 1o04_A 340 EQGPQVDET 348 (500)
T ss_dssp SBCCCSSHH
T ss_pred ccCcccCHH
Confidence 999999864
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-72 Score=574.27 Aligned_cols=325 Identities=38% Similarity=0.605 Sum_probs=308.7
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+.+.++ +++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 24 ~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 100 (498)
T 4f3x_A 24 MDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEKE 100 (498)
T ss_dssp CCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 34589999999987666 999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+++++.|+|||..++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus 101 ~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (498)
T 4f3x_A 101 ADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAW 180 (498)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHH
Confidence 999999999999999999933699999999999999998877665542 2456788999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 259 (498)
T 4f3x_A 181 KLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAA 259 (498)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999998888999999999999999999999999999999
Q ss_pred hhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCC
Q 016216 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKS 374 (393)
Q Consensus 295 a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~ 374 (393)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+
T Consensus 260 a~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~ 338 (498)
T 4f3x_A 260 AK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDT 338 (498)
T ss_dssp HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGG
T ss_pred Hh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 97 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++||++++.
T Consensus 339 ~~~~Gpli~~~ 349 (498)
T 4f3x_A 339 ENEIGPLISRR 349 (498)
T ss_dssp GCSSCCCSCHH
T ss_pred cCccccCcCHH
Confidence 99999999753
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-72 Score=574.42 Aligned_cols=324 Identities=41% Similarity=0.690 Sum_probs=309.3
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 104 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHAD 104 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3679999999876788999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|+++++.|+|||+.+++ .|+..+++.++|++++.+++.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 105 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 183 (515)
T 2d4e_A 105 ELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRI 183 (515)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhh
Confidence 999999999999999998 699999999999999998877765553 345567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|++.+++
T Consensus 184 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~ 263 (515)
T 2d4e_A 184 APALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD 263 (515)
T ss_dssp HHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG
T ss_pred hHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999999997
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.|+++
T Consensus 264 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 342 (515)
T 2d4e_A 264 -HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPET 342 (515)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred -cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++||+|++.
T Consensus 343 ~~gpli~~~ 351 (515)
T 2d4e_A 343 EVGPLIHPE 351 (515)
T ss_dssp SBCCCSCHH
T ss_pred ccCCCcCHH
Confidence 999999863
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-72 Score=575.08 Aligned_cols=322 Identities=38% Similarity=0.660 Sum_probs=308.5
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHH
Confidence 346899999999887889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhH----hcCccccCCCCceEEEEEecceeEEEECCCCccHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADK----IHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 211 (393)
.++|+++++.|+|||..++ |+..+++.++|++++.++ +.+...+...+. .++.++|+|||++|+|||||+..
T Consensus 91 ~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999887 899999999999999988 666665544455 88999999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+++| +.+.++.|+.||+||.|+||||+.+|+.|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 245 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVA 245 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 788999999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||
T Consensus 246 ~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 324 (517)
T 3r31_A 246 AAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDP 324 (517)
T ss_dssp HHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99998 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
+|+++++||++++.
T Consensus 325 ~~~~~~~Gpli~~~ 338 (517)
T 3r31_A 325 LDYATHLGPLVSKA 338 (517)
T ss_dssp TSTTCSBCCBSCHH
T ss_pred CCcCCcccCCcCHH
Confidence 99999999999863
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-72 Score=572.54 Aligned_cols=323 Identities=32% Similarity=0.526 Sum_probs=308.8
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++||||+|+. ++++++++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 678999999999 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHh-hhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW-ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+++++.|+|||+.+++. |+..+++.++||+++ .+...+...+...+...++.++|+|||++|+|||||+...++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999986 999999999999999 566666666544567789999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..|.+++.++|+|+|+||+++|.+.++++.|+.|++||.|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hhcC------CccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc
Q 016216 295 AKSN------LKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (393)
Q Consensus 295 a~~~------~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~ 368 (393)
++ + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 6 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCcccccC
Q 016216 369 GDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 369 G~p~~~~~~~Gpli~~~ 385 (393)
|||+|+++++||++++.
T Consensus 351 G~p~~~~~~~Gpli~~~ 367 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEK 367 (538)
T ss_dssp SCTTSTTCSBCCCSCHH
T ss_pred CCCCCCCCCCcCccCHH
Confidence 99999999999999864
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-72 Score=572.02 Aligned_cols=326 Identities=29% Similarity=0.446 Sum_probs=308.2
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
+...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999887789999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (393)
+.++|+++++.|+|||..+++. |+..+++.++||+++.+.+.+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 9999999999999999999984 99999999999999887776654432 235568889999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 214 ~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|+ .+.++.|+.|++||.|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999994 5567999999999999999999999999999
Q ss_pred HhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCc-cHHHHHHHHHHHHhcCccCCCC
Q 016216 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRIVGDPF 372 (393)
Q Consensus 294 ~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~~G~p~ 372 (393)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|||+
T Consensus 260 aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 987 89999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
|+++++||++++.
T Consensus 339 ~~~~~~gpli~~~ 351 (521)
T 4e4g_A 339 DEKADMGPVVTKE 351 (521)
T ss_dssp CTTCSBCCCSCHH
T ss_pred CccCccCCCCCHH
Confidence 9999999999853
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-72 Score=567.51 Aligned_cols=323 Identities=39% Similarity=0.671 Sum_probs=306.1
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 24 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 24 HKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997655 8999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|+++++.|+|||..+++..|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+...++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 99999999999999998754999999999999999888766554432 34467889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.++++.|++|++||.|+||||+.+|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999778889999999999999999999999999999997
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGV 376 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~ 376 (393)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++
T Consensus 260 -~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 338 (495)
T 1wnd_A 260 -SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 338 (495)
T ss_dssp -GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred -cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccC
Q 016216 377 EQGPQVLFS 385 (393)
Q Consensus 377 ~~Gpli~~~ 385 (393)
++|||+++.
T Consensus 339 ~~Gpli~~~ 347 (495)
T 1wnd_A 339 ELGPLSSLA 347 (495)
T ss_dssp CBCCCSCHH
T ss_pred CccCCCCHH
Confidence 999999863
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-72 Score=566.35 Aligned_cols=325 Identities=35% Similarity=0.567 Sum_probs=308.4
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999876778999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
++|++++++|+|||+.+++ .|+..+++.++|++++.+++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999999987 5999999999999998887766654432 3456788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+++++.++|+|+|+||+++|++.++++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999998
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCC-C
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK-S 374 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~-~ 374 (393)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+| +
T Consensus 243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 7 8999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccCcccccC
Q 016216 375 GVEQGPQVLFS 385 (393)
Q Consensus 375 ~~~~Gpli~~~ 385 (393)
++++|||+++.
T Consensus 322 ~~~~gpli~~~ 332 (479)
T 2imp_A 322 DIAMGPLINAA 332 (479)
T ss_dssp SCSBCCCSSHH
T ss_pred CCccCCCcCHH
Confidence 99999999863
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-71 Score=565.36 Aligned_cols=325 Identities=38% Similarity=0.658 Sum_probs=310.2
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
++|+++++.|+|||..+++. |+..+++.++|++.+..+..+...+. ..+...++.++|+|||++|+|||||+...+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 99999999999999999985 99999999999999988776655543 24567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.+.++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 325 ~~~gpli~~~ 334 (481)
T 3jz4_A 325 VTIGPLIDEK 334 (481)
T ss_dssp CCBCCCSCHH
T ss_pred CccccccCHH
Confidence 9999999864
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-71 Score=567.56 Aligned_cols=322 Identities=31% Similarity=0.485 Sum_probs=306.1
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||. .|+.++.++|.++|+++++.|+++.
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34789999999887789999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC--C----CceEEEEEecceeEEEECCCCccHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--G----NYHIQTLHEPIGVAGQIVPWNFPLL 210 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~N~P~~ 210 (393)
++|+++++.|+|||..+++. |+..+++.++|++++.+++.+...+.. . +...++.++|+|||++|+|||||+.
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 99999999999999999985 999999999999999988776544322 1 4567889999999999999999999
Q ss_pred HHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHH
Q 016216 211 LFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290 (393)
Q Consensus 211 ~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 290 (393)
..++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+++|.+.++++.|+.||+||.|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCC
Q 016216 291 QELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 291 ~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~ 370 (393)
++.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 99876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCcccccC
Q 016216 371 PFKSGVEQGPQVLFS 385 (393)
Q Consensus 371 p~~~~~~~Gpli~~~ 385 (393)
|+ +++++||++++.
T Consensus 325 p~-~~~~~gpli~~~ 338 (505)
T 3prl_A 325 PE-DDADITPVIDEK 338 (505)
T ss_dssp TT-TTCSBCCCSCHH
T ss_pred CC-CcCcCCcccCHH
Confidence 99 999999999863
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-71 Score=563.27 Aligned_cols=322 Identities=36% Similarity=0.581 Sum_probs=306.0
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+. ++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999653 7899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|+++++.|+|||..+++. |+..+++.++|++++.+++.+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999985 99999999999999998877665443 235567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVS---GYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~---g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++ |.+.++++.|++|++||.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8677889999999999999999999999999999
Q ss_pred HhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhc-CccCCCC
Q 016216 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPF 372 (393)
Q Consensus 294 ~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~G~p~ 372 (393)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++ +++|||+
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 997 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccCcccccC
Q 016216 373 KSGVEQGPQVLFS 385 (393)
Q Consensus 373 ~~~~~~Gpli~~~ 385 (393)
++++++|||+++.
T Consensus 327 ~~~~~~gpli~~~ 339 (487)
T 2w8n_A 327 EEGTTQGPLINEK 339 (487)
T ss_dssp STTCCBCCCSSHH
T ss_pred cccCcccCCCCHH
Confidence 9999999999863
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-71 Score=560.77 Aligned_cols=325 Identities=31% Similarity=0.509 Sum_probs=306.5
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC--CCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
++|+++++.|+|||+.+++. |+..+++.++|++++.+++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999999986 999999999999999988776655432 346788999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
++++||++||+||+|||+.+|+++ ..+.+++.++|+|+|+||+++|++.+.++.|+.||+||.|+||||+.+|+.|++.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~ 242 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEI 242 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999887899999999999999999999999999999
Q ss_pred HhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCC
Q 016216 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFK 373 (393)
Q Consensus 294 ~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~ 373 (393)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||.|
T Consensus 243 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~ 321 (485)
T 4dng_A 243 AGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321 (485)
T ss_dssp HHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred Hhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 987 8899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCcccccC
Q 016216 374 SGVEQGPQVLFS 385 (393)
Q Consensus 374 ~~~~~Gpli~~~ 385 (393)
+++++||++++.
T Consensus 322 ~~~~~gpli~~~ 333 (485)
T 4dng_A 322 PKTVVGPLINER 333 (485)
T ss_dssp TTCSBCCCSSHH
T ss_pred CCCccCCCCCHH
Confidence 999999999853
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-70 Score=562.43 Aligned_cols=322 Identities=31% Similarity=0.508 Sum_probs=304.0
Q ss_pred ccceeCCeeeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
.++||||+|+. ++++++++||. ||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 36899999995 36799999999 6999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc--CCCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP--GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
++|+++++.|+|||+.+++ .|+..+++.++||+++++++.+...+ ...+...++.++|+|||++|+|||||+...++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999998 59999999999999999888775532 22345678899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997788999999999999999999999999999998
Q ss_pred hh-----cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccC
Q 016216 295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369 (393)
Q Consensus 295 a~-----~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G 369 (393)
+. .++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 81 2789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCcccccC
Q 016216 370 DPFKSGVEQGPQVLFS 385 (393)
Q Consensus 370 ~p~~~~~~~Gpli~~~ 385 (393)
|| ++++++|||+++.
T Consensus 353 ~p-~~~~~~Gpli~~~ 367 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAE 367 (516)
T ss_dssp CG-GGCCSBCCCSCHH
T ss_pred CC-ccccccCCCCCHH
Confidence 99 9999999999863
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-71 Score=558.32 Aligned_cols=316 Identities=31% Similarity=0.512 Sum_probs=295.7
Q ss_pred ceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 016216 60 NLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEEL 139 (393)
Q Consensus 60 ~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l 139 (393)
+||||+|+.+ ++ ++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 56 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHH
Q 016216 140 AALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPA 219 (393)
Q Consensus 140 ~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~A 219 (393)
+++++.|+|||..+++. |+..+++.++|++++++++.+...+.. +...++.++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999984 999999999999999988876665543 5678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 220 LTCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 220 LaaGN~VIlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
|++||+||+|||+.+|+++..+++++.++ |+|+|++|+++|.+.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999998876
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+||+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++|||+++.
T Consensus 312 ~~~gpli~~~ 321 (486)
T 3pqa_A 312 TDVGPLISVE 321 (486)
T ss_dssp CSBCCCSCHH
T ss_pred CCcCCCCCHH
Confidence 9999999853
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-70 Score=560.16 Aligned_cols=327 Identities=36% Similarity=0.562 Sum_probs=309.3
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
+...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEE 87 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 3445799999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC--CCceEEEEEecceeEEEECCCCccHHHH
Q 016216 135 NMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD--GNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 135 ~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
+.++|+++++.|+|||..+++. |+..+++.++|++.+.++..+ ..+.. .+...++.++|+|||++|+|||||+...
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (508)
T 3r64_A 88 HREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLS 165 (508)
T ss_dssp THHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 9999999999999999999986 999999999999998887666 44432 3567889999999999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTA-LYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
++++++||++||+||+|||+.+|+++ ..+.+++.++|+|+|++|+++|++.+.++.|+.|++||.|+||||+.+|+.|+
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 166 IRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999997788999999999999999999999999999
Q ss_pred HHHhhc-CCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCC
Q 016216 292 ELAAKS-NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 292 ~~~a~~-~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~ 370 (393)
+.+++. ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 325 (508)
T 3r64_A 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGD 325 (508)
T ss_dssp HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSC
T ss_pred HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 988742 5799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCcccccC
Q 016216 371 PFKSGVEQGPQVLFS 385 (393)
Q Consensus 371 p~~~~~~~Gpli~~~ 385 (393)
|.++++++||++++.
T Consensus 326 p~~~~~~~gpli~~~ 340 (508)
T 3r64_A 326 PSAEGTLVGPVINDS 340 (508)
T ss_dssp TTSSSCCBCCCSCHH
T ss_pred CccCCCcccCCCCHH
Confidence 999999999999863
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-70 Score=556.88 Aligned_cols=322 Identities=33% Similarity=0.500 Sum_probs=304.4
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHKE 83 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999876778999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc-CCCCceEEEEEecceeEEEECCCCccHHHHHHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKV 216 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l 216 (393)
+|++++++|+|||+.+++ .|+..+++.++|++.+.+.+.+...+ ...+...++.++|+|||++|+|||||+...++++
T Consensus 84 ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 162 (486)
T 1t90_A 84 ELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF 162 (486)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence 999999999999999987 59999999999999877776665433 1234567889999999999999999999999999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+.++.|+.|++||.|+||||+.+|+.|++.+++
T Consensus 163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~ 241 (486)
T 1t90_A 163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241 (486)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999 56789999999999999999999999999999987
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCce-EEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSR-TYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++| +|||++ ||+|+++|+++++++++|||++++
T Consensus 242 -~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~ 319 (486)
T 1t90_A 242 -NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDG 319 (486)
T ss_dssp -TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred -cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccC
Confidence 88999999999999999999999999999999999999999999999 999999 999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||+|++.
T Consensus 320 ~~~gpli~~~ 329 (486)
T 1t90_A 320 VFLGPVIRED 329 (486)
T ss_dssp CCBCCCSCHH
T ss_pred CccCCCCCHH
Confidence 9999999864
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-71 Score=559.89 Aligned_cols=323 Identities=34% Similarity=0.547 Sum_probs=306.0
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
...++||||+|+.+.++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 356899999999988889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
.++|+++++.|+|||..+++..|+..+++.++|+++..+++.+... ....++.++|+|||++|+|||||+...+++
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999999556999999999999999888765432 234788999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|+||+++|.+.++++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999988
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 319 ~~~gpli~~~ 328 (478)
T 3ty7_A 319 TQVGPIISKK 328 (478)
T ss_dssp CCBCCCSCHH
T ss_pred CccCCCcCHH
Confidence 9999999753
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-70 Score=556.13 Aligned_cols=323 Identities=30% Similarity=0.516 Sum_probs=303.5
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++.||||+|+. ++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 3468899999994 678999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+++++.|+|||+.+++ .|+..+++.++|++++.+++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 99999999999999999986 5999999999999998887766654432 344567889999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFH----EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIV 290 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~----~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 290 (393)
++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+++| +.++++.|..|++||.|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999988876 46999999999999 78899999999999999999999999999
Q ss_pred HHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCC
Q 016216 291 QELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 291 ~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~ 370 (393)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++||
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999997 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCcccccC
Q 016216 371 PFKSGVEQGPQVLFS 385 (393)
Q Consensus 371 p~~~~~~~Gpli~~~ 385 (393)
|.++++++|||+++.
T Consensus 335 p~~~~~~~gpli~~~ 349 (500)
T 2j6l_A 335 PWDPNVLYGPLHTKQ 349 (500)
T ss_dssp TTSTTCCBCCCSCHH
T ss_pred cccCCCccccCCCHH
Confidence 999999999999863
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-70 Score=555.09 Aligned_cols=319 Identities=30% Similarity=0.523 Sum_probs=300.8
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNME 137 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~ 137 (393)
.++||||+|+.+.+ +++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.+
T Consensus 5 ~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 80 (475)
T 1euh_A 5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDKE 80 (475)
T ss_dssp CCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 47899999997533 999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCC-CC----ceE-EEEEecceeEEEECCCCccHHH
Q 016216 138 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD-GN----YHI-QTLHEPIGVAGQIVPWNFPLLL 211 (393)
Q Consensus 138 ~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~N~P~~~ 211 (393)
+|+++++.|+|||+.+++ .|+..+++.++|++++.+++.+...+.. .+ ... ++.++|+|||++|+|||||+..
T Consensus 81 ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 159 (475)
T 1euh_A 81 KIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNL 159 (475)
T ss_dssp HHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHH
Confidence 999999999999999987 5999999999999999887766543322 23 355 8899999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|+
T Consensus 160 ~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~ 239 (475)
T 1euh_A 160 AGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 239 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997778899999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||
T Consensus 240 ~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 240 KMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
+| ++++|||+++.
T Consensus 317 ~~-~~~~gpli~~~ 329 (475)
T 1euh_A 317 ED-DADITPLIDTK 329 (475)
T ss_dssp GG-TCSBCCCSCHH
T ss_pred cc-cCccCCCCCHH
Confidence 99 99999999863
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-70 Score=555.32 Aligned_cols=321 Identities=28% Similarity=0.421 Sum_probs=302.6
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+.+. ++++++||.||+++++++.++.+|+++++++|++||+. .|+.++.++|.++|+++++.|+++.
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 34689999999753 78999999999999999999999999999999999862 4999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC---CC--CceEEEEEecceeEEEECCCCccHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG---DG--NYHIQTLHEPIGVAGQIVPWNFPLLL 211 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~P~Gvv~~i~p~N~P~~~ 211 (393)
++|+++++.|+|||..+++ .|+..+++.++||+++++++.+...+. .. +...++.++|+|||++|+|||||+..
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999998 599999999999999998876665443 22 34678999999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|.+ ++++.|+.|++||.|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
+|+++++|||+++.
T Consensus 330 ~~~~~~~Gpli~~~ 343 (501)
T 1uxt_A 330 RDPTVDVGPLISPS 343 (501)
T ss_dssp TSTTCSBCCCSCHH
T ss_pred cccCCcccCCCCHH
Confidence 99999999999863
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-69 Score=549.89 Aligned_cols=321 Identities=31% Similarity=0.434 Sum_probs=303.4
Q ss_pred cceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 016216 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEE 138 (393)
Q Consensus 59 ~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~ 138 (393)
++||||+|+.+ ++++++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999975 457899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHH
Q 016216 139 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAP 218 (393)
Q Consensus 139 l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ 218 (393)
|+++++.|+|||+.+++ .|+..+++.++|++...+++.+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 84 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999998 59999999999999998887766544223445667799999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcC
Q 016216 219 ALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSN 298 (393)
Q Consensus 219 ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 298 (393)
||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.++.|+.|++||.|+||||+.+|+.|++.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999999999999999999 67889999999999999999999999999999887 8
Q ss_pred CccE-EEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCcc-HHHHHHHHHHHHhcCccCC-CCCCC
Q 016216 299 LKPV-TLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARAMRRIVGD-PFKSG 375 (393)
Q Consensus 299 ~~pv-~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~L~~~~~~~~~G~-p~~~~ 375 (393)
++|+ ++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++ ||+|+++|+++++++++|| |.|++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||++++.
T Consensus 321 ~~~Gpli~~~ 330 (490)
T 3ju8_A 321 PFMGAVISLS 330 (490)
T ss_dssp CSBCCCSCHH
T ss_pred CccccccCHH
Confidence 9999999853
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-69 Score=549.43 Aligned_cols=307 Identities=29% Similarity=0.427 Sum_probs=295.7
Q ss_pred eeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhh
Q 016216 74 TFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQ 153 (393)
Q Consensus 74 ~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 153 (393)
+++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCC
Q 016216 154 SLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233 (393)
Q Consensus 154 a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~ 233 (393)
++ .|+..+++.++|+++.++++.+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 98 59999999999999999988777655445667899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEE
Q 016216 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (393)
Q Consensus 234 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~i 313 (393)
+|+++..|.+++.++|+|+|++|+++|.+.+.++ |+.|++||.|+||||+.+|+.|++.+++ ++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999998888888 9999999999999999999999999998 8999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 314 V~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|+++++|||+++.
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~ 311 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEK 311 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999853
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-68 Score=550.67 Aligned_cols=324 Identities=25% Similarity=0.328 Sum_probs=301.6
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 134 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~ 134 (393)
...++||||+|+.+ +..+.++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++
T Consensus 62 ~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 35689999999974 34778999998 899999999999999999999999999 99999999999999999999999
Q ss_pred c-HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHH
Q 016216 135 N-MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212 (393)
Q Consensus 135 ~-~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~ 212 (393)
+ +++|+.++++|+|||+.+++.+++..+++.++|++.+++++.+..... ..+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 999999999999999999986459999999999999998887654322 22344566777889999999999999999
Q ss_pred HHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 213 ~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
.++++||| +||+||+|||+.+|+++..+++++.++|+|+|+||+++|++.++++.|+.|++|++|+||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHhhcCCcc------EEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcC
Q 016216 293 LAAKSNLKP------VTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR 366 (393)
Q Consensus 293 ~~a~~~~~p------v~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~ 366 (393)
.+++ ++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++
T Consensus 297 ~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 9997 7774 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCccCcccccC
Q 016216 367 IVGDP-FKSGVEQGPQVLFS 385 (393)
Q Consensus 367 ~~G~p-~~~~~~~Gpli~~~ 385 (393)
++||| +|+++++||+|++.
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~ 395 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAK 395 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHH
T ss_pred cCCCcccCcCCccCCCcCHH
Confidence 99999 99999999999853
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-67 Score=569.69 Aligned_cols=324 Identities=33% Similarity=0.508 Sum_probs=307.9
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCC-CceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRT-AEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++||||+|+. ++++++++||.| |+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 478999999998 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-CCCceEEEEEecceeEEEECCCCccHHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTW 214 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~ 214 (393)
.++|+.+++.|+|||+.++.. |+..+++.++||+.+++++.+...+. ..+..++..++|+|||++|+|||||+...++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 999999999999999999985 99999999999999998887654432 3466788899999999999999999999999
Q ss_pred HHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHH
Q 016216 215 KVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294 (393)
Q Consensus 215 ~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 294 (393)
++++||++||+||+|||+.+|+++..++++++++|+|+|+||+++|.+.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred hh-----cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccC
Q 016216 295 AK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369 (393)
Q Consensus 295 a~-----~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G 369 (393)
+. .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 83 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCcccccC
Q 016216 370 DPFKSGVEQGPQVLFS 385 (393)
Q Consensus 370 ~p~~~~~~~Gpli~~~ 385 (393)
||.|+++++||+|++.
T Consensus 846 ~p~d~~t~~Gpvi~~~ 861 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDK 861 (1026)
T ss_dssp CTTSTTCSBCCCSSHH
T ss_pred CcccccCccccccCHH
Confidence 9999999999999864
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-67 Score=531.11 Aligned_cols=310 Identities=28% Similarity=0.435 Sum_probs=294.4
Q ss_pred CCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCC
Q 016216 71 SGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 150 (393)
Q Consensus 71 ~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 150 (393)
+..+++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 457799999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEec
Q 016216 151 YVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKS 230 (393)
Q Consensus 151 ~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKp 230 (393)
..+++. |+..+++.++|++++.+++.+.......+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999984 9999999999999999887766532233556888999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCC
Q 016216 231 AEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS 310 (393)
Q Consensus 231 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~ 310 (393)
|+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.|++|+.|+||||+.+|+.|++.+++ ++||+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999998 56778899999999999999999999999999998 8899999999999
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 311 PFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 311 ~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|+||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|+++++++++|||.++++++||+++..
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~ 314 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFD 314 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999863
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-67 Score=536.59 Aligned_cols=319 Identities=25% Similarity=0.332 Sum_probs=290.5
Q ss_pred ccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKA-FDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 58 ~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
.++||||+|+.+.+ .+++++||.||+++++++.++ +|+++|+++|++| |+ .|+.++.++|.++|+++++.|+++.
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 47899999997544 589999999999999999987 9999999999999 58 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCc-------cccCC--CCceEEEEEecc-eeEEEECCCC
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGL-------TVPGD--GNYHIQTLHEPI-GVAGQIVPWN 206 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~-------~~~~~--~~~~~~~~~~P~-Gvv~~i~p~N 206 (393)
++|++++++|+|||+.++.. |+..+++.++||+.+.+++.+. ..+.. .....+..++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 99999999999999999874 9999999999999988776432 11221 222457889997 9999999999
Q ss_pred ccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcC-CCcCEEEEeCCh
Q 016216 207 FPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAG-LPPGVLNVVSGYGPTAGAALASH-MDVDKLSFTGHC 284 (393)
Q Consensus 207 ~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~-~~v~~V~ftGs~ 284 (393)
||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|+||+++|.+.+ +..+ +.+|.|+||||+
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS~ 238 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGSA 238 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESCH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECCH
Confidence 9999999999999999999999999999999999999999999 899999999996544 3333 579999999999
Q ss_pred HHHHHHHHHHh-hcCCccEEEecCCCCeEEEcCCC-----CHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHH
Q 016216 285 DTGKIVQELAA-KSNLKPVTLELGGKSPFIIFDDA-----DVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 358 (393)
Q Consensus 285 ~~g~~i~~~~a-~~~~~pv~lelgG~~~~iV~~dA-----Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~ 358 (393)
.+|+.|++.++ ..++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++||+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998864 23889999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhcCccCCCCCCCCccCcccccC
Q 016216 359 AKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 359 L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|+++++++++|||+|+++++|||+++.
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~ 345 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSRE 345 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHH
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHH
Confidence 999999999999999999999999863
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-66 Score=522.83 Aligned_cols=308 Identities=27% Similarity=0.381 Sum_probs=287.4
Q ss_pred CCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCC
Q 016216 70 ASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGK 149 (393)
Q Consensus 70 ~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 149 (393)
...++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++|+++|+++++.|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc--CCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEE
Q 016216 150 PYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP--GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIV 227 (393)
Q Consensus 150 ~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VI 227 (393)
+... . .|+...++.+++|+....++...... ...+...+..++|+|||++|+|||||+...++++++||++||+||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8644 3 49999999999999888776544322 223455677889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecC
Q 016216 228 LKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG 307 (393)
Q Consensus 228 lKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelg 307 (393)
+|||+.+|+++..+.+++.++|+|+|++++++| +.+.+..|..| ++.|.||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 56788889876 8999999999999999999998 8899999999
Q ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 308 GKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 308 G~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||.++++++||++++.
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 312 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEK 312 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999863
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-64 Score=517.34 Aligned_cols=315 Identities=25% Similarity=0.319 Sum_probs=286.3
Q ss_pred CCcccceeCCeeeeCCCCCeeeeecCCCCceEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 016216 55 ISYTKNLINGQFVDAASGKTFPVYDPRTAEVIA-NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIE 133 (393)
Q Consensus 55 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~ 133 (393)
....++||||+|+.+.+ ++||.||++++ +++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 34468999999997532 99999999998 9999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHh--cCccc----cC---CCCceEEEEEecceeEEEECC
Q 016216 134 KNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI--HGLTV----PG---DGNYHIQTLHEPIGVAGQIVP 204 (393)
Q Consensus 134 ~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~P~Gvv~~i~p 204 (393)
++.++|+++++.|+|||+.+++ .|+..+++.++||++..++. .+... +. ..+...++.++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 9999999999999999999987 49999999999999998872 22221 11 122346889999999999999
Q ss_pred CCccHHHHH--HHHHHHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEE
Q 016216 205 WNFPLLLFT--WKVAPALTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKL 278 (393)
Q Consensus 205 ~N~P~~~~~--~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V 278 (393)
||||+...+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|+||+++|.+.++++.|+.||+||+|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 99999999999999999999999999999875 468999999999999888899999999999999
Q ss_pred EEeCChHHHHHHHHHHhhcCC--ccEEEecCCCCeEEEcCCC---CHHHHHHHHHHHHHhccCCCccCCceEEEcCc-cH
Q 016216 279 SFTGHCDTGKIVQELAAKSNL--KPVTLELGGKSPFIIFDDA---DVDQAVELAHFALFYNQGQCCCAGSRTYVHER-VY 352 (393)
Q Consensus 279 ~ftGs~~~g~~i~~~~a~~~~--~pv~lelgG~~~~iV~~dA---Dld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~ 352 (393)
+||||+.+|+.|++.+++ ++ ||+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|+|||++ +|
T Consensus 259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999997 88 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 353 d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
|+|+++|++++++++.| +.+||++++
T Consensus 338 d~f~~~l~~~~~~~~~~------~~~gp~~~~ 363 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAPQ------TMLTDGIAK 363 (528)
T ss_dssp HHHHHHHHHHHHTCCCE------ECSCHHHHH
T ss_pred HHHHHHHHHHHHhcccC------CCCCHHHHH
Confidence 99999999999998754 568888763
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-63 Score=502.06 Aligned_cols=302 Identities=28% Similarity=0.371 Sum_probs=267.4
Q ss_pred CeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh
Q 016216 73 KTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV 152 (393)
Q Consensus 73 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 152 (393)
..+++.||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4588999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhcchHHHHHHHHHHHHhhhHhcCcc-ccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEE
Q 016216 153 QSLKSEVPMVVRLLHYYAGWADKIHGLT-VPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVL 228 (393)
Q Consensus 153 ~a~~~Ev~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIl 228 (393)
+++..|+..+++.++|+++..+++.... .+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9885699999999999999888765432 221 124567889999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCC
Q 016216 229 KSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGG 308 (393)
Q Consensus 229 Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG 308 (393)
|||+.+|+++..+++++.++ +|+|+||+++| +.+.++.|+. ++||.|+||||+.+|+.|++.+++ ++||+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999999 99999999999 6788899998 799999999999999999999987 89999999999
Q ss_pred CCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 309 KSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 309 ~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
|||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++++ |.++ ++||++++.
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~ 311 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTER 311 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999988 7776 899998753
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-62 Score=500.60 Aligned_cols=297 Identities=20% Similarity=0.295 Sum_probs=272.8
Q ss_pred CCCCCeeeeecCCCCceE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc
Q 016216 69 AASGKTFPVYDPRTAEVI-ANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNN 147 (393)
Q Consensus 69 ~~~~~~~~~~~P~tg~~i-~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 147 (393)
+.++++++++||.||+++ ++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 346788999999999999 79999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCChhhhhhcchHHHHHHHHHHHHhhhH--hcCccc----cC--CCC-ceEEEEEecceeEEEECCCCccHHHH--HHHH
Q 016216 148 GKPYVQSLKSEVPMVVRLLHYYAGWADK--IHGLTV----PG--DGN-YHIQTLHEPIGVAGQIVPWNFPLLLF--TWKV 216 (393)
Q Consensus 148 Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~Gvv~~i~p~N~P~~~~--~~~l 216 (393)
|||+.++. .|+..+++.++||++.+++ ..+... +. ..+ ...++.++|+|||++|+|||||+... .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99998886 4999999999999998876 333322 11 111 13578999999999999999999985 4999
Q ss_pred HHHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHH
Q 016216 217 APALTCGNTIVLKSAEQTPLTALYVAKLF----HEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292 (393)
Q Consensus 217 ~~ALaaGN~VIlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 292 (393)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+.++++.|+.|++||.|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999977889999999999999999999999999999
Q ss_pred HHhhcCC--ccEEEecCCCCeEEEcCCCCHH--HHHHHHHHHHHhccCCCccCCceEEEcCc-cHHHHHHHHHHHHhcCc
Q 016216 293 LAAKSNL--KPVTLELGGKSPFIIFDDADVD--QAVELAHFALFYNQGQCCCAGSRTYVHER-VYDEFVEKAKARAMRRI 367 (393)
Q Consensus 293 ~~a~~~~--~pv~lelgG~~~~iV~~dADld--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~d~f~~~L~~~~~~~~ 367 (393)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|+|||++ +||+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9987 65 9999999999999999999999 99999999999999999999999999999 99999999999999988
Q ss_pred cC
Q 016216 368 VG 369 (393)
Q Consensus 368 ~G 369 (393)
+|
T Consensus 319 ~g 320 (510)
T 1ez0_A 319 PS 320 (510)
T ss_dssp CB
T ss_pred CC
Confidence 65
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-61 Score=519.21 Aligned_cols=293 Identities=31% Similarity=0.466 Sum_probs=279.5
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHH
Q 016216 89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHY 168 (393)
Q Consensus 89 v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~ 168 (393)
++.++.+|+++|+++|++||. .|+.++.++|.++|+++++.|+++.++|+++++.|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 789999999999999999999 999999999999999999999999999999999999999999974 99999999999
Q ss_pred HHHhhhHhcCcc--ccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 016216 169 YAGWADKIHGLT--VPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH 246 (393)
Q Consensus 169 ~a~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~ 246 (393)
|+...++..+.. .+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998877653 344456778899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhc--CCccEEEecCCCCeEEEcCCCCHHHHH
Q 016216 247 EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKS--NLKPVTLELGGKSPFIIFDDADVDQAV 324 (393)
Q Consensus 247 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~--~~~pv~lelgG~~~~iV~~dADld~a~ 324 (393)
++|+|+|+||+++|.+.+ ++.|+.||+|+.|+||||+++|+.|++.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998777 99999999999999999999999999998863 489999999999999999999999999
Q ss_pred HHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 325 ELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 325 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|||.++++++||+|++.
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~ 840 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVE 840 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHH
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999864
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-61 Score=484.24 Aligned_cols=286 Identities=27% Similarity=0.338 Sum_probs=261.4
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHH
Q 016216 92 GDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG 171 (393)
Q Consensus 92 ~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~ 171 (393)
.+.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..+++..|+..+++.+++++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999 999999999999999999999999999999999999999999876799999999998887
Q ss_pred hhhHhcCccc----cCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 016216 172 WADKIHGLTV----PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHE 247 (393)
Q Consensus 172 ~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~ 247 (393)
...++..... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 7655433211 111234678899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHH
Q 016216 248 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELA 327 (393)
Q Consensus 248 aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i 327 (393)
+ +|+|++|+++|.+ +.+..|+.| +||.|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 455677777 89999999999999999999997 899999999999999999999999999999
Q ss_pred HHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCccccc
Q 016216 328 HFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLF 384 (393)
Q Consensus 328 ~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~ 384 (393)
++++|.|+||.|++++|+|||+++||+|+++|+++++++ +|+|.++++++||++++
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~ 304 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISA 304 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCH
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCH
Confidence 999999999999999999999999999999999999998 69999999999999986
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-57 Score=455.03 Aligned_cols=288 Identities=17% Similarity=0.217 Sum_probs=249.7
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHH
Q 016216 88 NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLH 167 (393)
Q Consensus 88 ~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~ 167 (393)
.++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+||+..+++..+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3456678999999999999999 99999999999999999999999999999999999999988765444444444444
Q ss_pred HHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHH----
Q 016216 168 YYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAK---- 243 (393)
Q Consensus 168 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~---- 243 (393)
++....+ ..+ ..+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3332211 111 1222345567889999999999999999999999999999999999999999999999998655
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecC-CCCeEEEcCCCCHHH
Q 016216 244 LFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELG-GKSPFIIFDDADVDQ 322 (393)
Q Consensus 244 ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelg-G~~~~iV~~dADld~ 322 (393)
++.++|+|+|+||+++|.+.+.++.|+.|++||.|+||||+.+ .+.+++ ++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5688999999999999988889999999999999999999974 455555 88999 7888 999999999999999
Q ss_pred HHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHH-------hcCccCCCC-CCCCccCcccccC
Q 016216 323 AVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA-------MRRIVGDPF-KSGVEQGPQVLFS 385 (393)
Q Consensus 323 a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~-------~~~~~G~p~-~~~~~~Gpli~~~ 385 (393)
|++.+++++|+|+||.|++++|||||+++||+|+++|+++. +++++|+|. ++++++||+++.+
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~ 305 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGK 305 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTC
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHH
Confidence 99999999999999999999999999999999999999985 467889998 7789999999654
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-56 Score=451.35 Aligned_cols=278 Identities=18% Similarity=0.160 Sum_probs=229.5
Q ss_pred eeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc-------
Q 016216 75 FPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNN------- 147 (393)
Q Consensus 75 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------- 147 (393)
--++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+
T Consensus 9 ~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~ 86 (463)
T 2h5g_A 9 SGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRL 86 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTS
T ss_pred CCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccC
Confidence 34789999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCChh----hhhhcchHHHHHHHHHHHHhhhHhcCccccCC---CCceEEEEEecceeEEEECCCCccHHHHHHHHHHHh
Q 016216 148 GKPYV----QSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD---GNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPAL 220 (393)
Q Consensus 148 Gk~~~----~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~AL 220 (393)
|||+. ++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+||| |.... +++++||
T Consensus 87 Gk~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~AL 163 (463)
T 2h5g_A 87 AAPLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAI 163 (463)
T ss_dssp CHHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHH
T ss_pred CCchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHH
Confidence 79987 355 5999999999999998877776654321 3445788999999999999887 77777 8999999
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhh
Q 016216 221 TCGNTIVLKSAEQTPLTALYVAKLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296 (393)
Q Consensus 221 aaGN~VIlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 296 (393)
++||+||+|||+.+|+++..|++++.++ | |+|+||+++| +.++++.|+.|++||.|+||||+.+|+.|++.++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa- 240 (463)
T 2h5g_A 164 ASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK- 240 (463)
T ss_dssp HHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS-
T ss_pred HcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC-
Confidence 9999999999999999999999999999 9 9999999999 6778999999999999999999999999999876
Q ss_pred cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHH-HHHHHHHHHH
Q 016216 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD-EFVEKAKARA 363 (393)
Q Consensus 297 ~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d-~f~~~L~~~~ 363 (393)
+||+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++|| .+++++.+.+
T Consensus 241 --l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~ 305 (463)
T 2h5g_A 241 --GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDML 305 (463)
T ss_dssp --SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHH
T ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHH
Confidence 799999999999999999999999999999999999 999999999999999997 4566665554
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-54 Score=437.19 Aligned_cols=264 Identities=22% Similarity=0.279 Sum_probs=229.8
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHH-H
Q 016216 89 VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLL-H 167 (393)
Q Consensus 89 v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l-~ 167 (393)
++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.++++.++|+++++.|+|||..+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999 9999999999999999999999999999999999999999988755666667666 3
Q ss_pred HHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 016216 168 YYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFH- 246 (393)
Q Consensus 168 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~- 246 (393)
++.. .+..+ ..+.+.+...+..++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~--~~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--ccccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3332 11111 1222334456889999999999999999999999999999999999999999999999998888875
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHH
Q 016216 247 ---EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQA 323 (393)
Q Consensus 247 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a 323 (393)
++|+|+|+||+++|.+.+.++.|+.||+|+.|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998888999999999999999999998644 4444 78999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHH
Q 016216 324 VELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKAR 362 (393)
Q Consensus 324 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~ 362 (393)
++.+++++|+|+||.|++++++|||+++||+|+++|+++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 269 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH 269 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999874
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-54 Score=431.68 Aligned_cols=269 Identities=20% Similarity=0.187 Sum_probs=233.4
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh----hhhh-------cchHHH
Q 016216 94 AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYV----QSLK-------SEVPMV 162 (393)
Q Consensus 94 ~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~Ev~~~ 162 (393)
.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|+++++.|+||+.. +++. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 99999999999999999999999999999999999999853 4432 378899
Q ss_pred HHHHHHHHHhhhHhcCccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHH
Q 016216 163 VRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239 (393)
Q Consensus 163 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~ 239 (393)
++.+++++.+.+.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887542 333332 23556788999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEE
Q 016216 240 YVAKLF----HEAGLPPGVLNVVSGYGP-TAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314 (393)
Q Consensus 240 ~l~~ll----~~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV 314 (393)
.+.+++ .++|+|+|+||+++|.+. +.++.|..|++||.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998554 5788888999999999999999999998764 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc---CCCC
Q 016216 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV---GDPF 372 (393)
Q Consensus 315 ~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~---G~p~ 372 (393)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|+++++++++ |||.
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~ 315 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD 315 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH
Confidence 9999999999999999999999 9999999999999999999999999999998 8874
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-54 Score=434.58 Aligned_cols=267 Identities=16% Similarity=0.177 Sum_probs=240.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhhcchHH-HHHHHHHHH
Q 016216 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY----VQSLKSEVPM-VVRLLHYYA 170 (393)
Q Consensus 96 ~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~Ev~~-~~~~l~~~a 170 (393)
.+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||. .++...|+.. +++.++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 47899999999999 9999999999999999999999999999999999999998 7775458888 889999999
Q ss_pred HhhhHhc------CccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHH
Q 016216 171 GWADKIH------GLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241 (393)
Q Consensus 171 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l 241 (393)
+..+++. +...+. +.+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8887775 343231 12445688999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEE
Q 016216 242 AKLFH----E----AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (393)
Q Consensus 242 ~~ll~----~----aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~i 313 (393)
++++. + +|+|+|++|+++ ++.++++.|..|++||.|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667889999999999999999999999998865 599999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc---CCCCC
Q 016216 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV---GDPFK 373 (393)
Q Consensus 314 V~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~---G~p~~ 373 (393)
|++|||+|.|++.+++++|.|+| .|++++|+|||+++ |+|+++|+++++++++ |||.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~ 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH
Confidence 99999999999999999999999 99999999999999 9999999999999998 98853
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-53 Score=424.09 Aligned_cols=265 Identities=18% Similarity=0.224 Sum_probs=239.7
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhh-------cchHHH
Q 016216 94 AEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPY----VQSLK-------SEVPMV 162 (393)
Q Consensus 94 ~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~Ev~~~ 162 (393)
-+++++++++|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+||+. .++.. .|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 3679999999999999 9999999999999999999999999999999999999985 44431 489999
Q ss_pred HHHHHHHHHhhhHhcCccccC---CCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHH
Q 016216 163 VRLLHYYAGWADKIHGLTVPG---DGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTAL 239 (393)
Q Consensus 163 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~ 239 (393)
++.+++|+++.++ .+...+. ..+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999998765 3443331 22445688999999999999886 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEEEeCC-chhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEE
Q 016216 240 YVAKLFH----EAGLPPGVLNVVSGY-GPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314 (393)
Q Consensus 240 ~l~~ll~----~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV 314 (393)
.+++++. ++|+|+|++|+++|. +.+.++.|..|++||.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 679999999999984 466788999999999999999999999999876 4899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc
Q 016216 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (393)
Q Consensus 315 ~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~ 368 (393)
++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|+++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 296 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGV 296 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999 9999999999999999999999999999876
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=94.85 E-value=3.1 Score=40.31 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=97.9
Q ss_pred CCceEEEEEecceeEEEECCCC---ccHHHHHHHHHHHhhcCCE-EEE-ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 016216 185 GNYHIQTLHEPIGVAGQIVPWN---FPLLLFTWKVAPALTCGNT-IVL-KSAEQTPLTALYVAKLFHEAGLPPGVLNVVS 259 (393)
Q Consensus 185 ~~~~~~~~~~P~Gvv~~i~p~N---~P~~~~~~~l~~ALaaGN~-VIl-Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~ 259 (393)
.|......+.|+--|++..|.- ||-..+ -.++||-.+|+. +|+ -|++.. ...-.+.-+.+.+|..+ ++.
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvL-M~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVL-MNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHHHH-HHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhHHH-HhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EEE
Confidence 4556677899999999999953 554444 457899999986 333 343321 12223334455667653 444
Q ss_pred CCchhHHHHHHc----CCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEE--cCCCCHHHHHHHHHHHHHh
Q 016216 260 GYGPTAGAALAS----HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII--FDDADVDQAVELAHFALFY 333 (393)
Q Consensus 260 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV--~~dADld~a~~~i~~~~~~ 333 (393)
-.|.+.-.+|.- -+.||+|+=.|..=+..+=++.. +..-+=+. .|.+=++| ++++|.+..+..++.-+=+
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~---g~VgIDm~-AGPSEilViAD~~a~p~~vAaDLlsQAEH 268 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF---GQVGIDMV-AGPSEILVISDGRTDPDWIAMDLFSQAEH 268 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB---TTBEECCC-CCCCEEEEEECSCSCHHHHHHHHHHHHTT
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc---CCcCcccc-cccceEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 335555556654 57899999999876654222221 21222122 34444333 4458999998887766544
Q ss_pred ccCCCccCCceEEEcCc--cHHHHHHHHHHHHhcC
Q 016216 334 NQGQCCCAGSRTYVHER--VYDEFVEKAKARAMRR 366 (393)
Q Consensus 334 ~~GQ~C~a~~~v~V~~~--i~d~f~~~L~~~~~~~ 366 (393)
.. ..+.++|..+ ..+++.+++.+.++.+
T Consensus 269 d~-----~a~~iLvT~s~~la~~V~~~i~~~l~~l 298 (423)
T 4gic_A 269 DE-----DAQAILISPDAAHLEAVQASIERLLPGM 298 (423)
T ss_dssp CT-----TCEEEEEESCHHHHHHHHHHHHHHGGGC
T ss_pred CC-----CCeEEEEeCcHHHHHHHHHHHHHHHhhC
Confidence 43 2456677665 3555555555555543
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=82.31 E-value=38 Score=32.84 Aligned_cols=167 Identities=16% Similarity=0.115 Sum_probs=97.0
Q ss_pred CceEEEEEecceeEEEECCC---CccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 016216 186 NYHIQTLHEPIGVAGQIVPW---NFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYG 262 (393)
Q Consensus 186 ~~~~~~~~~P~Gvv~~i~p~---N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~ 262 (393)
|......+.|+.-|++..|. -||-.. +-..+||-.+|+.=|+--+|-. ..-.+.-..+.+|..+ ++.-.|
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vGG 186 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVGG 186 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHHH-HHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECCH
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhHH-HHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeeccc
Confidence 55566789999999999996 355444 4457899999987554322211 1223334456677654 333235
Q ss_pred hhHHHHHHc----CCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEec-CCCCeEEE--cCCCCHHHHHHHHHHHHHhcc
Q 016216 263 PTAGAALAS----HMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLEL-GGKSPFII--FDDADVDQAVELAHFALFYNQ 335 (393)
Q Consensus 263 ~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lel-gG~~~~iV--~~dADld~a~~~i~~~~~~~~ 335 (393)
.+.-.+|.- -|.||+|+=.|..=+...=+. ... ....|-..+ .|.+=++| +++||.+..+..++.-+=+..
T Consensus 187 AQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~-Vs~-~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 187 AQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQ-VSQ-RLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHH-HHH-CTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHH-hHh-hcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 555555543 478999999987655432211 111 011222222 34444443 456999999888776654433
Q ss_pred CCCccCCceEEEcCc--cHHHHHHHHHHHHhcC
Q 016216 336 GQCCCAGSRTYVHER--VYDEFVEKAKARAMRR 366 (393)
Q Consensus 336 GQ~C~a~~~v~V~~~--i~d~f~~~L~~~~~~~ 366 (393)
..+.++|..+ ..+++.+++.+.++.+
T Consensus 265 -----~a~aiLvT~s~~la~~V~~ev~~ql~~l 292 (434)
T 1kae_A 265 -----DSQVILLTPAADMARRVAEAVERQLAEL 292 (434)
T ss_dssp -----TCEEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred -----CCcEEEEECCHHHHHHHHHHHHHHHHhC
Confidence 2456677655 4566666666655544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 393 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-122 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-122 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-102 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-90 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-80 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 4e-60 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 2e-58 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 8e-54 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 5e-34 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-32 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 5e-14 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 361 bits (928), Expect = e-122
Identities = 200/330 (60%), Positives = 245/330 (74%), Gaps = 1/330 (0%)
Query: 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP- 112
++ + IN ++ DA S KTFP +P T EVI VAEGD ED+D+AV AR AF G
Sbjct: 10 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSP 69
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
W +M R R++ R ADLIE++ LAALET +NGKPYV S ++ MV++ L YYAGW
Sbjct: 70 WRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGW 129
Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
ADK HG T+P DG++ T HEP+GV GQI+PWNFPLL+ WK+ PAL GN +V+K AE
Sbjct: 130 ADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAE 189
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
QTPLTALYVA L EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG + G+++Q
Sbjct: 190 QTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQV 249
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
A SNLK VTLELGGKSP II DAD+D AVE AHFALF+NQGQC CAGSRT+V E +Y
Sbjct: 250 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIY 309
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
DEFVE++ ARA R+VG+PF S EQGPQV
Sbjct: 310 DEFVERSVARAKSRVVGNPFDSKTEQGPQV 339
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 361 bits (928), Expect = e-122
Identities = 181/330 (54%), Positives = 237/330 (71%), Gaps = 1/330 (0%)
Query: 54 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGP- 112
Q YTK IN ++ + SGK FPV++P T E + V EGD ED+D+AV AR+AF G
Sbjct: 10 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 69
Query: 113 WPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGW 172
W M ER R++ + ADLIE++ LA +E N GK + + ++ ++ L Y AGW
Sbjct: 70 WRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 129
Query: 173 ADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAE 232
ADKI G T+P DGN+ T EP+GV GQI+PWNFPLL+F WK+ PAL+CGNT+V+K AE
Sbjct: 130 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 189
Query: 233 QTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQE 292
QTPLTAL++ L EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG + GK+++E
Sbjct: 190 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 249
Query: 293 LAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVY 352
A KSNLK V+LELGGKSP I+F DAD+D AVE AH +FY+QGQCC A SR +V E +Y
Sbjct: 250 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 309
Query: 353 DEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
DEFV ++ RA + ++G+P GV QGPQ+
Sbjct: 310 DEFVRRSVERAKKYVLGNPLTPGVSQGPQI 339
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 310 bits (794), Expect = e-102
Identities = 127/333 (38%), Positives = 190/333 (57%), Gaps = 6/333 (1%)
Query: 51 PPVQISYTKNLINGQFVDAASGKTF-PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFD 109
V ++ N G+ + + G T PV++P T V+ + AE++D+AV +A+ A+
Sbjct: 13 GSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL 72
Query: 110 EGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYY 169
+ W KM ERSR+ML AA +I + + +A LE NN + + ++ + + YY
Sbjct: 73 K--WSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN-GKTITEAEYDIDAAWQCIEYY 129
Query: 170 AGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLK 229
AG A + G + G T EP+GV I+ WN+P ++ WK APAL CGN +V K
Sbjct: 130 AGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFK 189
Query: 230 SAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289
+ TP+T + +A++FHEAG+P G++NVV G G G+ L H +V K+SFTG TGK
Sbjct: 190 PSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKK 248
Query: 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHE 349
V E++AK +K VTLELGGKSP +IF D +++ AV A A F QGQ C G+R +V
Sbjct: 249 VMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQR 307
Query: 350 RVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+ +F+E+ R +VGDP + G +
Sbjct: 308 EIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLI 340
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 279 bits (713), Expect = 1e-90
Identities = 129/325 (39%), Positives = 180/325 (55%), Gaps = 6/325 (1%)
Query: 58 TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
K LING+ V G+ PVY+P T +V+ +AE AE +D AV A AF E W + T
Sbjct: 3 HKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAE--WGQTT 59
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
P R+ +L+ AD+IE+N + A LE+ N GKP + E+P +V + ++AG A ++
Sbjct: 60 PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119
Query: 178 GLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPL 236
GL + +P+GV I PWN+PL++ WK+APAL GN +VLK +E TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179
Query: 237 TALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAK 296
TAL +A+L + P GV+N++ G G T G L H V +S TG TG+ +
Sbjct: 180 TALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS-HTA 237
Query: 297 SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFV 356
S++K +ELGGK+P I+FDDAD++ VE +YN GQ C A R Y + +YD V
Sbjct: 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 297
Query: 357 EKAKARAMRRIVGDPFKSGVEQGPQ 381
EK A G P E GP
Sbjct: 298 EKLGAAVATLKSGAPDDESTELGPL 322
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 252 bits (643), Expect = 4e-80
Identities = 94/334 (28%), Positives = 156/334 (46%), Gaps = 12/334 (3%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
KN +NG++ S +Y+P + + +V E++D A+A+KA W ++
Sbjct: 5 KNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA--WRALSY 60
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAG-----WA 173
ER+ + + AD++ ++ E++ A+ + K Y ++ V + +
Sbjct: 61 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120
Query: 174 DKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
G EP+G+ I P+N+P+ L K+APAL GN I K Q
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180
Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
++ L +A+ F EAGLP GV N ++G G G + H V+ ++FTG G+ + ++
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
A ++P+ LELGGK I+ +DAD++ + F GQ C A R V E V D
Sbjct: 241 AG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 297
Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQVLFSAD 387
E VEK + + + +G+P SAD
Sbjct: 298 ELVEKIREKVLALTIGNPEDDADITPLIDTKSAD 331
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 200 bits (509), Expect = 4e-60
Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 13/329 (3%)
Query: 59 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTP 118
+ + G++ SG+ V P IA V E+++R + K M
Sbjct: 18 PSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWS-ARDMPG 74
Query: 119 YERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHG 178
ER ++ +AAD+IE+N++ A + N GKP + EV V L KI G
Sbjct: 75 TERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGG 133
Query: 179 LTV-----PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQ 233
+ EP+GV I P+N+PL K+ + GN +V+K +
Sbjct: 134 DYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSIS 193
Query: 234 TPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293
PL A K +AG PP + +++ G A + + V +SFTG + G+ V ++
Sbjct: 194 DPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEK-IVADDRVAAVSFTGSTEVGERVVKV 252
Query: 294 AAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYD 353
+K +ELGG P I+ +DAD+D A + ++ GQ C A VY
Sbjct: 253 GG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYG 309
Query: 354 EFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
+ VE+ R VGDP V+ GP +
Sbjct: 310 KLVEEVAKRLSSLRVGDPRDPTVDVGPLI 338
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 196 bits (499), Expect = 2e-58
Identities = 101/332 (30%), Positives = 162/332 (48%), Gaps = 14/332 (4%)
Query: 59 KNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMT 117
I G++VD + + +P +EV+ A+ + + A+ A KAF W
Sbjct: 39 PLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKT--WKDWP 94
Query: 118 PYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIH 177
+RSR++L+AA L+ + EL A + GK +V++ ++V + + YYA A +
Sbjct: 95 QEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYR 153
Query: 178 GLTV--PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTP 235
V ++ + P+G I PWNFP+ +FT + + GNT++ K AE
Sbjct: 154 YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAV 213
Query: 236 LTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295
+ V ++FHEAG PPGV+N + G G GA L H + ++FTG + G + E A
Sbjct: 214 VVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273
Query: 296 K-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHER 350
+ + K +E GGK+ I+ + AD D A E + + QGQ C A SR + +
Sbjct: 274 RLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQG 333
Query: 351 VYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
Y+ +E+ RA R VG P + + GP V
Sbjct: 334 AYEPVLERVLKRAERLSVG-PAEENPDLGPVV 364
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 182 bits (462), Expect = 8e-54
Identities = 76/290 (26%), Positives = 114/290 (39%), Gaps = 11/290 (3%)
Query: 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156
I V AR+AF+ + R + + +I +N++ ++ + GK S
Sbjct: 2 ISDTVKRAREAFNS--GKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYY 59
Query: 157 SEVPMVVRLLHYYA----GWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLF 212
EV V+ L WA+ + EP+GV I WN+P L
Sbjct: 60 EEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLT 119
Query: 213 TWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASH 272
+ A+ GN ++LK +E + A +A L + + G
Sbjct: 120 IQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQ---YMDQNLYLVVKGGVPETTELLK 176
Query: 273 MDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332
D + +TG GKIV AAK +L PVTLELGGKSP + D D+D A + F
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235
Query: 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQV 382
N GQ C A + ++ VEK K G+ K + G +
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-DFYGEDAKQSRDYGRII 284
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 130 bits (326), Expect = 5e-34
Identities = 49/313 (15%), Positives = 98/313 (31%), Gaps = 22/313 (7%)
Query: 71 SGKTFPVYDPRTAEVIAN-VAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAA 129
+ F + T E + ++++A A K + + ++ +R+ ++ A
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARD--FRRLNNSKRASLLRTIA 58
Query: 130 DLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGD----- 184
+E +++ A P V+ E+ L +A + D
Sbjct: 59 SELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPT 117
Query: 185 ----GNYHIQTLHEPIGVAGQIVPWNFPL--LLFTWKVAPALTCGNTIVLKSAEQTPLT- 237
I+ +G NFPL A AL G +++K P T
Sbjct: 118 RAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTS 177
Query: 238 ---ALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELA 294
A + + + LP + ++ G G AL SH ++ + FTG G+ + LA
Sbjct: 178 QIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 237
Query: 295 AKSNLKPVTLELGGKSPFIIFDDADVDQAVEL---AHFALFYNQGQCCCAGSRTYVHERV 351
+ G + + +L ++ GQ C +
Sbjct: 238 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP 297
Query: 352 YDEFVEKAKARAM 364
+ + +
Sbjct: 298 ETQAFIETAQSLI 310
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 124 bits (310), Expect = 2e-32
Identities = 41/304 (13%), Positives = 94/304 (30%), Gaps = 19/304 (6%)
Query: 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQS 154
+++ R+A+D T E+++ + + A+ +++ +E+ + K +
Sbjct: 1 DELLEKAKKVREAWDV--LRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58
Query: 155 LKSEVPMVVRL-------------LHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQ 201
+K +V RL G D + + ++ + +
Sbjct: 59 VKE--SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPI 116
Query: 202 IVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSG- 260
+ + + AL GNTI+L+ + + EA +
Sbjct: 117 GIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEF 176
Query: 261 YGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADV 320
T + + + + + G + + PV G + + AD+
Sbjct: 177 IENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236
Query: 321 DQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGP 380
+AV + A C A + VHE++ EF+ + V +
Sbjct: 237 KKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIV 295
Query: 381 QVLF 384
+
Sbjct: 296 PDVV 299
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.0 bits (173), Expect = 5e-14
Identities = 37/287 (12%), Positives = 87/287 (30%), Gaps = 32/287 (11%)
Query: 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLK 156
+ ARKA + ++ RS I+ + D ++ N + N + +
Sbjct: 5 SQQIAKNARKAGNI--LKTISNEGRSDILYKIHDALKANAHAIEE----ANKIDLAVAKE 58
Query: 157 SEV--PMVVRL--------------LHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAG 200
+ + ++ RL + A D + + + + + + V
Sbjct: 59 TGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGV 118
Query: 201 QIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPG------V 254
+V + + A ++ GN +LK +++ T +AK+ ++ V
Sbjct: 119 LLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPV 178
Query: 255 LNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFII 314
+V + L + L + + PV G +
Sbjct: 179 GSVQLIETRQDVSDLLDQDEYIDLVVPR---GSNALVRKIKDTTKIPVLGHADGICSIYL 235
Query: 315 FDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 361
+DAD+ +A ++ A C ++ + +
Sbjct: 236 DEDADLIKAKRISLDAKTNYPAGCNA-METLLINPKFSKWWEVLENL 281
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 393 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 90.83 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=3.2e-74 Score=584.88 Aligned_cols=333 Identities=55% Similarity=0.971 Sum_probs=319.3
Q ss_pred CcCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHH
Q 016216 53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADL 131 (393)
Q Consensus 53 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g-~W~~~~~~~R~~~L~~~a~~ 131 (393)
..++++++||||+|+++.++++++++||.||++|++++.++.+|+++|+++|++||+.+ .|+.++.++|.++|+++++.
T Consensus 9 ~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~ 88 (494)
T d1bxsa_ 9 LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADL 88 (494)
T ss_dssp CCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred CCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence 66788899999999998889999999999999999999999999999999999999742 59999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHH
Q 016216 132 IEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211 (393)
Q Consensus 132 l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 211 (393)
|++++++|++++++|+|||..++...|+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+..
T Consensus 89 L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 168 (494)
T d1bxsa_ 89 IERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchhHH
Confidence 99999999999999999999887666899999999999999998888888877778899999999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|+++..+.+++.++|||+|++|+|+|++.++++.|+.||+|+.|.||||+.+|+.|+
T Consensus 169 ~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i~ 248 (494)
T d1bxsa_ 169 FLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.+++.++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~~ 328 (494)
T d1bxsa_ 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCT
T ss_pred HHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeecc
Confidence 99887679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
.++++++||||++.
T Consensus 329 ~~~~~~~gpli~~~ 342 (494)
T d1bxsa_ 329 LTPGVSQGPQIDKE 342 (494)
T ss_dssp TSTTCCBCCCSCHH
T ss_pred CCCCCcCCCcCCHH
Confidence 99999999999864
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=2.6e-73 Score=577.88 Aligned_cols=333 Identities=60% Similarity=0.999 Sum_probs=318.1
Q ss_pred CcCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHH
Q 016216 53 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADL 131 (393)
Q Consensus 53 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g-~W~~~~~~~R~~~L~~~a~~ 131 (393)
+.+.++++||||+|+++.++++++++||.||+++++++.++.+|+++|+++|++||+.+ .|+.++.++|.++|+++++.
T Consensus 9 p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~ 88 (494)
T d1o04a_ 9 PEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADL 88 (494)
T ss_dssp CCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHH
T ss_pred CccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHH
Confidence 45677899999999998889999999999999999999999999999999999999632 59999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHH
Q 016216 132 IEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLL 211 (393)
Q Consensus 132 l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~ 211 (393)
|+++.++|++++++|+|||..++...|+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+..
T Consensus 89 l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 168 (494)
T d1o04a_ 89 IERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHH
Confidence 99999999999999999999988767999999999999999998888887777777889999999999999999999999
Q ss_pred HHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHH
Q 016216 212 FTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQ 291 (393)
Q Consensus 212 ~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 291 (393)
.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.++++.|+.|++|+.|.||||+++|+.|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCC
Q 016216 292 ELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDP 371 (393)
Q Consensus 292 ~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p 371 (393)
+.++..++||+++||||+||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++||+|+++|+++++++++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 328 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCc
Confidence 88875589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccC
Q 016216 372 FKSGVEQGPQVLFS 385 (393)
Q Consensus 372 ~~~~~~~Gpli~~~ 385 (393)
.++++++||||++.
T Consensus 329 ~~~~~~~gpli~~~ 342 (494)
T d1o04a_ 329 FDSKTEQGPQVDET 342 (494)
T ss_dssp TSTTCSBCCCSSHH
T ss_pred ccccCccCCCCCHH
Confidence 99999999999864
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=7.7e-71 Score=560.42 Aligned_cols=331 Identities=39% Similarity=0.691 Sum_probs=314.0
Q ss_pred CCCCcCCcccceeCCeeeeCCCCCee-eeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 016216 50 IPPVQISYTKNLINGQFVDAASGKTF-PVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA 128 (393)
Q Consensus 50 ~~~~~~~~~~~~I~G~~~~~~~~~~~-~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~ 128 (393)
.....++...+||||+|+++.+|+++ +++||.||+++++++.++.+|+++|+++|++||+ .|++++..+|.++|+++
T Consensus 12 ~~~~~~~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~--~W~~~s~~eR~~iL~~~ 89 (503)
T d1a4sa_ 12 TGSVVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEA 89 (503)
T ss_dssp TTTCCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHH
T ss_pred CCceeecCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHH
Confidence 33445556678999999998777766 6899999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCcc
Q 016216 129 ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFP 208 (393)
Q Consensus 129 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P 208 (393)
++.|++++++|+++++.|+|||+.++.. |+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||
T Consensus 90 a~~L~~~~eela~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP 168 (503)
T d1a4sa_ 90 ARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYP 168 (503)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSH
T ss_pred HHHHHHhHHHHHHHHHHhhhhcchhhhh-hhhhhhhcccccccccccccccccccCCCcccccccccceeeecccCCCCh
Confidence 9999999999999999999999999985 999999999999999988877766666667789999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHH
Q 016216 209 LLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGK 288 (393)
Q Consensus 209 ~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 288 (393)
+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+.++.|++|++|++|.||||+++|+
T Consensus 169 ~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~ 247 (503)
T d1a4sa_ 169 FMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGK 247 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 678999999999999999999999999
Q ss_pred HHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc
Q 016216 289 IVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (393)
Q Consensus 289 ~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~ 368 (393)
.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++++|++++.+.++++++
T Consensus 248 ~i~~~aa~-~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~ 326 (503)
T d1a4sa_ 248 KVMEMSAK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVV 326 (503)
T ss_dssp HHHHHHHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHHHHhhh-cCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEee
Confidence 99999987 88999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCcccccC
Q 016216 369 GDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 369 G~p~~~~~~~Gpli~~~ 385 (393)
|+|.++.+++||++++.
T Consensus 327 g~~~~~~~~~gp~i~~~ 343 (503)
T d1a4sa_ 327 GDPLLTETRMGGLISKP 343 (503)
T ss_dssp SCTTSTTCCBCCCSCHH
T ss_pred ccccccccccccccCHH
Confidence 99999999999999864
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.5e-70 Score=550.57 Aligned_cols=324 Identities=40% Similarity=0.670 Sum_probs=302.0
Q ss_pred cccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNM 136 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~ 136 (393)
..++||||+|+++ ++++++++||+||++|++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~ 78 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 78 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHhCH
Confidence 3589999999975 679999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc-CCCCceEEEEEecceeEEEECCCCccHHHHHHH
Q 016216 137 EELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP-GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWK 215 (393)
Q Consensus 137 ~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~ 215 (393)
++|+++++.|+|||+.++...++..+.+.++|++...........+ ...+...++.++|+|||++|+|||||+...+++
T Consensus 79 ~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 158 (474)
T d1wnda_ 79 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 158 (474)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhcc
Confidence 9999999999999999997667777778777777765544433322 234567889999999999999999999999999
Q ss_pred HHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 216 VAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 216 l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
+++||++||+||+|||+.+|+++..++++++++ +|+|++|+++|.+.++++.|++||+|+.|.||||+++|+.|.+.++
T Consensus 159 ~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~ 237 (474)
T d1wnda_ 159 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 237 (474)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence 999999999999999999999999999999774 9999999999988889999999999999999999999999999999
Q ss_pred hcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 296 KSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 296 ~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
+ ++||+++|||||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|++.++++++|+|.+++
T Consensus 238 ~-~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~ 316 (474)
T d1wnda_ 238 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 316 (474)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred c-CCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccccC
Q 016216 376 VEQGPQVLFS 385 (393)
Q Consensus 376 ~~~Gpli~~~ 385 (393)
+++||+++..
T Consensus 317 ~~~Gpli~~~ 326 (474)
T d1wnda_ 317 TELGPLSSLA 326 (474)
T ss_dssp CCBCCCSCHH
T ss_pred ceeccccccc
Confidence 9999999863
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.4e-67 Score=538.41 Aligned_cols=323 Identities=31% Similarity=0.508 Sum_probs=302.4
Q ss_pred cccceeCCeeeeCCCCCeeeeecCC-CCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 57 YTKNLINGQFVDAASGKTFPVYDPR-TAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 57 ~~~~~I~G~~~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
..++||||+|+.+ +++++++||. ||+++++++.++.+|+++|+++|++||+ .|+.+|.++|.++|+++++.|+++
T Consensus 37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~s~~~R~~iL~~~a~~l~~~ 112 (516)
T d1uzba_ 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 4589999999974 5689999996 7999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCcccc--CCCCceEEEEEecceeEEEECCCCccHHHHH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP--GDGNYHIQTLHEPIGVAGQIVPWNFPLLLFT 213 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~ 213 (393)
.++|+++++.|+|||..++.. |+..+++.+++++....+..+.... ...+...+..++|+|||++|+|||||+...+
T Consensus 113 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~ 191 (516)
T d1uzba_ 113 KRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCcccccccccccccccc
Confidence 999999999999999999875 9999999999999998877655433 2235667888999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHH
Q 016216 214 WKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQEL 293 (393)
Q Consensus 214 ~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 293 (393)
+++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|.+.+.++.|+.||+|+.|.||||+.+|+.|++.
T Consensus 192 ~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~ 271 (516)
T d1uzba_ 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred ccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999998
Q ss_pred Hhh-----cCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCcc
Q 016216 294 AAK-----SNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIV 368 (393)
Q Consensus 294 ~a~-----~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~ 368 (393)
++. .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++++++++++++
T Consensus 272 aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~ 351 (516)
T d1uzba_ 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhccc
Confidence 872 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCcccccC
Q 016216 369 GDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 369 G~p~~~~~~~Gpli~~~ 385 (393)
| |.++++++||+++..
T Consensus 352 g-~~~~~~~~gpli~~~ 367 (516)
T d1uzba_ 352 G-PAEENPDLGPVVSAE 367 (516)
T ss_dssp S-CGGGCCSBCCCSCHH
T ss_pred C-CCcccCccccccCHH
Confidence 9 668889999999753
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=2.3e-64 Score=512.90 Aligned_cols=329 Identities=29% Similarity=0.416 Sum_probs=302.9
Q ss_pred CCCCCcCCcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHH
Q 016216 49 IIPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRA 128 (393)
Q Consensus 49 ~~~~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~ 128 (393)
++..-.++..++||||+|+. ++++++++||.||+++++++.++.+|+++|+++|+++++. .|+.+|.++|.++|+++
T Consensus 8 ~~~~~~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~-~w~~~~~~~R~~iL~~~ 84 (499)
T d1ky8a_ 8 IKEKGGVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKA 84 (499)
T ss_dssp SEEETTEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHHSCHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchh-hhhcCCHHHHHHHHHHH
Confidence 33334466689999999995 6789999999999999999999999999999999887652 59999999999999999
Q ss_pred HHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccccC-----CCCceEEEEEecceeEEEEC
Q 016216 129 ADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTVPG-----DGNYHIQTLHEPIGVAGQIV 203 (393)
Q Consensus 129 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~ 203 (393)
++.|+++.++|++++++|+|||..+++ .|+..+++.++|++...++..+..... ..+...+..++|+|||++|+
T Consensus 85 a~~l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~ 163 (499)
T d1ky8a_ 85 ADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAIT 163 (499)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHh-hhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccc
Confidence 999999999999999999999999987 499999999999999888776554321 23456788999999999999
Q ss_pred CCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCC
Q 016216 204 PWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGH 283 (393)
Q Consensus 204 p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs 283 (393)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+++++++.+.+ +.+..|..|+.++.+.||||
T Consensus 164 p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs 242 (499)
T d1ky8a_ 164 PFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGS 242 (499)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESC
T ss_pred cccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecc
Confidence 99999999999999999999999999999999999999999999999999999999865 45688999999999999999
Q ss_pred hHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHH
Q 016216 284 CDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA 363 (393)
Q Consensus 284 ~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~ 363 (393)
+..++.+.+.++ .+|+++|+||+||+||++|||+|.|++.+++++|+|+||.|++++++|||++++|+|+++|++++
T Consensus 243 ~~~g~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~ 319 (499)
T d1ky8a_ 243 TEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 319 (499)
T ss_dssp HHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHH
T ss_pred cccceEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHH
Confidence 999999998764 48999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCccCCCCCCCCccCcccccC
Q 016216 364 MRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 364 ~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
+++++|+|.|+++++|||++.+
T Consensus 320 ~~l~~G~p~~~~~~~gpli~~~ 341 (499)
T d1ky8a_ 320 SSLRVGDPRDPTVDVGPLISPS 341 (499)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHH
T ss_pred HhCccCCCCCccccccccchHH
Confidence 9999999999999999999865
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=2e-61 Score=488.53 Aligned_cols=319 Identities=30% Similarity=0.514 Sum_probs=294.6
Q ss_pred CcccceeCCeeeeCCCCCeeeeecCCCCceEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 016216 56 SYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKN 135 (393)
Q Consensus 56 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~ 135 (393)
+.+++||||+|+. ++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|.++
T Consensus 2 k~~~n~I~G~~~~--~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~--~W~~~s~~~R~~iL~~~a~~L~~~ 77 (474)
T d1euha_ 2 KQYKNYVNGEWKL--SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 77 (474)
T ss_dssp CBCCEEETTEEEC--CSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceecCeecC--CCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 3569999999986 467999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHhcCccc------cCCCCceEEEEEecceeEEEECCCCccH
Q 016216 136 MEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKIHGLTV------PGDGNYHIQTLHEPIGVAGQIVPWNFPL 209 (393)
Q Consensus 136 ~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~------~~~~~~~~~~~~~P~Gvv~~i~p~N~P~ 209 (393)
.++|++++++|+|||..++.. |+...+..++++............ ....+...++.++|+|||++|+|||||+
T Consensus 78 ~~~la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~ 156 (474)
T d1euha_ 78 KEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156 (474)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccc
Confidence 999999999999999999875 999999999999887654432211 1223456778899999999999999999
Q ss_pred HHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHH
Q 016216 210 LLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKI 289 (393)
Q Consensus 210 ~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~ 289 (393)
...++++++||++||+||+||++.+|.++.++.+++.++|+|+|++|+++|++.++++.|..|++|+.|.||||+.+++.
T Consensus 157 ~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~ 236 (474)
T d1euha_ 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 236 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred hhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccc
Confidence 99999999999999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccC
Q 016216 290 VQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVG 369 (393)
Q Consensus 290 i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G 369 (393)
+.+.++ ++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|++.++++...++.|
T Consensus 237 i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~ 313 (474)
T d1euha_ 237 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313 (474)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred hhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhcccc
Confidence 998864 48999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCcccc
Q 016216 370 DPFKSGVEQGPQVL 383 (393)
Q Consensus 370 ~p~~~~~~~Gpli~ 383 (393)
+|.+.. +++|++.
T Consensus 314 ~~~~~~-~~~~~~~ 326 (474)
T d1euha_ 314 NPEDDA-DITPLID 326 (474)
T ss_dssp CGGGTC-SBCCCSC
T ss_pred Cccccc-ccccccc
Confidence 998865 4677654
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=4.9e-59 Score=473.37 Aligned_cols=303 Identities=20% Similarity=0.271 Sum_probs=267.2
Q ss_pred CCeeeeecCCCCceEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCC
Q 016216 72 GKTFPVYDPRTAEVIA-NVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKP 150 (393)
Q Consensus 72 ~~~~~~~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 150 (393)
+++|+++||+|||.|+ .++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|++++++|++++++|+|||
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp 79 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 79 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999997 7999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhhcchHHHHHHHHHHHHhhhHhcCcccc---------CCCCceEEEEEecceeEEEECCCCccHHHH--HHHHHHH
Q 016216 151 YVQSLKSEVPMVVRLLHYYAGWADKIHGLTVP---------GDGNYHIQTLHEPIGVAGQIVPWNFPLLLF--TWKVAPA 219 (393)
Q Consensus 151 ~~~a~~~Ev~~~~~~l~~~a~~~~~~~~~~~~---------~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~--~~~l~~A 219 (393)
..+++ .|+..+++.++||+++.++....... ...+...+..++|+|||++|+|||||+... .+++++|
T Consensus 80 ~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~A 158 (504)
T d1ez0a_ 80 EVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA 158 (504)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHH
Confidence 99988 59999999999999988775543221 112345678899999999999999999654 4699999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHh
Q 016216 220 LTCGNTIVLKSAEQTPLTALYVAKL----FHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAA 295 (393)
Q Consensus 220 LaaGN~VIlKps~~~p~~~~~l~~l----l~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 295 (393)
|++||+||+|||+.+|.++.++.++ +.++|+|+|++|+++|++.++++.|++|++|++|+||||+.+|+.|.+.++
T Consensus 159 LaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa 238 (504)
T d1ez0a_ 159 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH 238 (504)
T ss_dssp HHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhh
Confidence 9999999999999999998776554 567799999999999988899999999999999999999999999999998
Q ss_pred hcCCccE--EEecCCCCeEEEcCCCCHHHHH--HHHHHHHHhccCCCccCCceEEEcCcc-HHHHHHHHHHHHhcCccCC
Q 016216 296 KSNLKPV--TLELGGKSPFIIFDDADVDQAV--ELAHFALFYNQGQCCCAGSRTYVHERV-YDEFVEKAKARAMRRIVGD 370 (393)
Q Consensus 296 ~~~~~pv--~lelgG~~~~iV~~dADld~a~--~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~d~f~~~L~~~~~~~~~G~ 370 (393)
+ +++|+ ++|+|||||+||++|||++.|+ +.++.++|.|+||.|++++|+||+++. ++.|++.+++.++. +
T Consensus 239 ~-~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~- 313 (504)
T d1ez0a_ 239 E-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q- 313 (504)
T ss_dssp H-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C-
T ss_pred c-ccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c-
Confidence 7 77665 5599999999999999999885 478999999999999999999988775 45677777666553 3
Q ss_pred CCCCCCccCccccc
Q 016216 371 PFKSGVEQGPQVLF 384 (393)
Q Consensus 371 p~~~~~~~Gpli~~ 384 (393)
++++.+||+++.
T Consensus 314 --~~~~~~gp~i~~ 325 (504)
T d1ez0a_ 314 --SPSTLLTPGIRD 325 (504)
T ss_dssp --CCBCCSSHHHHH
T ss_pred --ccccccccchhh
Confidence 346789999875
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2e-55 Score=440.64 Aligned_cols=282 Identities=28% Similarity=0.335 Sum_probs=257.9
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhHh
Q 016216 97 IDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYAGWADKI 176 (393)
Q Consensus 97 v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~Ev~~~~~~l~~~a~~~~~~ 176 (393)
|++|+++|++||+ .|+.+|.++|.++|+++++.|++|+++|++++++|+|||..++..+|+..+++.+++++.....+
T Consensus 2 v~~av~~Ar~Af~--~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~ 79 (446)
T d1ad3a_ 2 ISDTVKRAREAFN--SGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDW 79 (446)
T ss_dssp HHHHHHHHHHHHH--TTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--hhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999999 99999999999999999999999999999999999999999987779999999999998877665
Q ss_pred cCccc----cCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCC
Q 016216 177 HGLTV----PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVAKLFHEAGLPP 252 (393)
Q Consensus 177 ~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~~ll~~aGlP~ 252 (393)
..... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+. +|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~ 158 (446)
T d1ad3a_ 80 AEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQ 158 (446)
T ss_dssp HSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCT
T ss_pred hcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccc
Confidence 43321 1223456788999999999999999999999999999999999999999999999999999998774 999
Q ss_pred CcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEEEcCCCCHHHHHHHHHHHHH
Q 016216 253 GVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALF 332 (393)
Q Consensus 253 g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~iV~~dADld~a~~~i~~~~~ 332 (393)
++++++.+.+... ..+. ++.+|.|.||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|
T Consensus 159 ~~~~~~~~~~~~~-~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~-~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 159 NLYLVVKGGVPET-TELL-KERFDHIMYTGSTAVGKIVMAAAAK-HLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp TTEEECCCSHHHH-HHHT-TSCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred cccccccccchhh-hhhc-ccccCceEEECcHHHHHHHHHHHHh-cCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 9999999865554 3444 5789999999999999999999987 88999999999999999999999999999999999
Q ss_pred hccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCCCccCcccccC
Q 016216 333 YNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQVLFS 385 (393)
Q Consensus 333 ~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~~Gpli~~~ 385 (393)
.|+||.|++++|+|||+++||+|+++|.+.++.+ +|+|.++++++||++++.
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~ 287 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDR 287 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHH
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhh
Confidence 9999999999999999999999999999999887 899999999999999753
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.5e-44 Score=358.51 Aligned_cols=273 Identities=15% Similarity=0.137 Sum_probs=225.1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcc------------hHHH
Q 016216 95 EDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLKSE------------VPMV 162 (393)
Q Consensus 95 ~~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~E------------v~~~ 162 (393)
+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|+++|++++++|+||+..++.. | +..+
T Consensus 1 ee~~~a~~~A~~Af~--~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~ 77 (414)
T d1o20a_ 1 DELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEM 77 (414)
T ss_dssp CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHH
Confidence 578999999999999 999999999999999999999999999999999999999887653 4 5667
Q ss_pred HHHHHHHHHhhhHhcCccccCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHHH
Q 016216 163 VRLLHYYAGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYVA 242 (393)
Q Consensus 163 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l~ 242 (393)
++.+++++...+...+...+...........+|+|+++++.|||||+...++++++||++||+||+|||+.+|.++..++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~ 157 (414)
T d1o20a_ 78 IKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIV 157 (414)
T ss_dssp HHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhh
Confidence 77888887766555554444333445667788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCC-eEEEcCC
Q 016216 243 KLFHEA----GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKS-PFIIFDD 317 (393)
Q Consensus 243 ~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~-~~iV~~d 317 (393)
++++++ |+|.++++.+.+.+.+....+..++. +.|+||+..+..+.+.+++ +++++++|+||+| ++||++|
T Consensus 158 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~a~~-~~~~~~le~gGgn~~viv~~d 233 (414)
T d1o20a_ 158 SAIREALKETEIPESSVEFIENTDRSLVLEMIRLRE---YLSLVIPRGGYGLISFVRD-NATVPVLETGVGNCHIFVDES 233 (414)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTT---TCSEEEECSCHHHHHHHHH-HCSSCBCCCCCCCEEEEECTT
T ss_pred hHHHhhhhhccccccccccccccchhhhhhcccccc---cCeEEEcccHHHHHHHhhh-ccccceecccCCCCCeecccc
Confidence 998877 45555577777655555555555433 3444444445666666666 5677788887755 5788899
Q ss_pred CCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHHhcCccCCCCCCC
Q 016216 318 ADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSG 375 (393)
Q Consensus 318 ADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~ 375 (393)
||++.|++.++++.|+| ||.|++++|++||+++||+|+++|.+...+..++++.++.
T Consensus 234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~ 290 (414)
T d1o20a_ 234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEK 290 (414)
T ss_dssp SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHH
T ss_pred cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchh
Confidence 99999999999999877 9999999999999999999999999999998887765543
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.7e-36 Score=299.36 Aligned_cols=258 Identities=17% Similarity=0.175 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHH------HHcCCChhhh------hhcchHHHH
Q 016216 96 DIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALET------WNNGKPYVQS------LKSEVPMVV 163 (393)
Q Consensus 96 ~v~~av~~A~~A~~~g~W~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~------~e~Gk~~~~a------~~~Ev~~~~ 163 (393)
++++.++.|++|++ .|+.++.++|.++|+++++.|++|.++|+++.. .+.|++...- ....+...+
T Consensus 4 ~~e~~~~~Ak~A~~--~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~ 81 (436)
T d1vlua_ 4 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 81 (436)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHH
Confidence 46788999999999 999999999999999999999999999988544 3445542210 001245555
Q ss_pred HHHHHHHHhhhHhcCccc--cCCCCceEEEEEecceeEEEECCCCccHHHHHHHHHHHhhcCCEEEEecCCCChHHHHHH
Q 016216 164 RLLHYYAGWADKIHGLTV--PGDGNYHIQTLHEPIGVAGQIVPWNFPLLLFTWKVAPALTCGNTIVLKSAEQTPLTALYV 241 (393)
Q Consensus 164 ~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~l~~ALaaGN~VIlKps~~~p~~~~~l 241 (393)
+.++..+...+....... ..+.+...+..+.|+||+++| ||++| ..++.+.++||++||+||+||++.++.++..+
T Consensus 82 ~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l 159 (436)
T d1vlua_ 82 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREM 159 (436)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHH
Confidence 666655554332211111 123466778889999999988 66777 56677889999999999999999999999888
Q ss_pred HHHHH--------HcCCCCCcEEEEeCCchhHHHHHHcCCCcCEEEEeCChHHHHHHHHHHhhcCCccEEEecCCCCeEE
Q 016216 242 AKLFH--------EAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFI 313 (393)
Q Consensus 242 ~~ll~--------~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~~~i 313 (393)
.++++ ++|+|+|+++++++ +.++++.|..|+.||.|+||||...++.+.+. ..+|++.++||++|+|
T Consensus 160 ~~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~ 234 (436)
T d1vlua_ 160 AKIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIY 234 (436)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEE
T ss_pred HHHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCcccee
Confidence 77764 66999999999987 45678899999999999999999988877554 3369999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcCccHHHHHHHHHHHH
Q 016216 314 IFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARA 363 (393)
Q Consensus 314 V~~dADld~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~ 363 (393)
|++|||+|+|++.++.++|++.|| |++.++++||+++++.|...+....
T Consensus 235 Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~ 283 (436)
T d1vlua_ 235 LDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTL 283 (436)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHH
T ss_pred ecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHH
Confidence 999999999999999999999996 8899999999999988865554433
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=90.83 E-value=5.9 Score=36.26 Aligned_cols=233 Identities=14% Similarity=0.042 Sum_probs=132.7
Q ss_pred CHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcC-CC---hhhhhhcchHHHH--------HHHHHHHHhhhHhcCcccc--
Q 016216 117 TPYERSRIMLRAADLIEKNMEELAALETWNNG-KP---YVQSLKSEVPMVV--------RLLHYYAGWADKIHGLTVP-- 182 (393)
Q Consensus 117 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G-k~---~~~a~~~Ev~~~~--------~~l~~~a~~~~~~~~~~~~-- 182 (393)
..++-.+..+.+.+.++++.|+-..-.+.... .. +.... .|+..+. +.|+......+.++....+
T Consensus 25 ~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~-~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~ 103 (431)
T d1k75a_ 25 ASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSA-EEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPP 103 (431)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCH-HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCH-HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 34455556667777777777765555555443 21 11111 2444332 2233333333333332222
Q ss_pred ----CCCCceEEEEEecceeEEEECCCC---ccHHHHHHHHHHHhhcCCEEE--EecCCCChHHHHHHHHHHHHcCCCCC
Q 016216 183 ----GDGNYHIQTLHEPIGVAGQIVPWN---FPLLLFTWKVAPALTCGNTIV--LKSAEQTPLTALYVAKLFHEAGLPPG 253 (393)
Q Consensus 183 ----~~~~~~~~~~~~P~Gvv~~i~p~N---~P~~~~~~~l~~ALaaGN~VI--lKps~~~p~~~~~l~~ll~~aGlP~g 253 (393)
...+......+.|+--|++..|.- ||-..+ ...+||-.+|+.=| .-|+...|. +.-..+.+|..+
T Consensus 104 ~~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvL-M~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~~- 177 (431)
T d1k75a_ 104 VDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVL-MLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD- 177 (431)
T ss_dssp EEEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHHH-HHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE-
T ss_pred ceeeccCCceeeeeeeehhhheeeccCCCccchHHHH-HHHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCccc-
Confidence 123556677899999999999964 555444 45789999997644 455544443 334456667653
Q ss_pred cEEEEeCCchhHHHHHHc----CCCcCEEEEeCChHHHHHHHHHHhhcCCccE-EEecCCCCeE--EEcCCCCHHHHHHH
Q 016216 254 VLNVVSGYGPTAGAALAS----HMDVDKLSFTGHCDTGKIVQELAAKSNLKPV-TLELGGKSPF--IIFDDADVDQAVEL 326 (393)
Q Consensus 254 ~v~vv~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~pv-~lelgG~~~~--iV~~dADld~a~~~ 326 (393)
++.-.|.+.-.+|.- -+.||+|+=.|+.=+..+=.+.... . ..| +=-+.|.+=+ |.++++|.+.++..
T Consensus 178 ---iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~-~-~~vgID~~aGPSEv~viAD~~a~p~~iAaD 252 (431)
T d1k75a_ 178 ---VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR-L-DGAAIDMPAGPSEVLVIADSGATPDFVASD 252 (431)
T ss_dssp ---EEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHS-T-TSCEESCCCCCCEEEEEECTTSCHHHHHHH
T ss_pred ---eEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhccc-C-CccccccccCCceEEEEecCCCCHHHHHHH
Confidence 343335555556654 5689999999987665533333321 1 112 1122454443 33566899999988
Q ss_pred HHHHHHhccCCCccCCceEEEcCc--cHHHHHHHHHHHHhcC
Q 016216 327 AHFALFYNQGQCCCAGSRTYVHER--VYDEFVEKAKARAMRR 366 (393)
Q Consensus 327 i~~~~~~~~GQ~C~a~~~v~V~~~--i~d~f~~~L~~~~~~~ 366 (393)
++.-+=+... .+.++|..+ ..+++.+.+.+.++.+
T Consensus 253 llaQAEH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l 289 (431)
T d1k75a_ 253 LLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAEL 289 (431)
T ss_dssp HHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTC
T ss_pred HHhccCCccc-----ceeEEEeccHHHHHHHHHHHHHHhhhc
Confidence 8776655443 455677655 5667777777666654
|