Citrus Sinensis ID: 016352

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-
Protein Sequence
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNNLQQSAAASASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVAIPKDHQSLSAAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNNAALMKSLEHDESNKSGNNQSVLNNGDVMTVDFMGIGGSRTRNHFQQQQSQELKFGSGINNIGQPRMQSLNHFQQQQQDVPFLN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHcHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEccccccccccHHHHHHHHcccccccccEccEEEcccEEEEccccccccccHHHHccccccccEEEEEccccccccccHccccEccccHHHHHHHcccccccEcccccEEccccccHHHHHHHccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcHcccccccccHHHHHcHEcccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEHHcccccccccccHHHHcHHHHHHHHHHHHcccccHHcccHHHHHHccccccc
Coil and Loop (DISEMBL)
MATNRFVCEICNkgfqrdqnlqlhrrghnlpwklrqrSTTEIRKrvyvcpepscvhhnparalgdltgikkhfsrkhgekkwkcekcskkyavqsdwkahsktcgtkeykcdcgtifsrrdsfITHRAFCDALAEESQKanqglnpqlghvsehissmpinnhtennnnplahhelmpmppkpfntMAAASIFESSNNNLQQSAAASASASLSATALLQKAAQMgatasngsmmsspmmhkslvtsmappsfvaipkdhQSLSAAAASMEEIslsssaqffsanighaegssamndvgMFYRFLDQNNAALMKSLEhdesnksgnnqsvlnngdvmtvdfmgiggsrtrnHFQQQQSQElkfgsginnigqprmqSLNHFqqqqqdvpfln
Flexible Loop (DISEMBL)
MATNRFVCEICNkgfqrdqnlqlhrrghnlpwklrqrsttEIRKRVYVCpepscvhhnparalgdltGIKKHfsrkhgekkwkcekcskkyavqsdwkahsktcgtkeykcdcgTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNNLQQSAAASASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVAIPKDHQSLSAAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNNAALMKSLEHDesnksgnnqsvlnngDVMTVDFMGIGGSRTRNHFQQQQSQELKFGSGINNIGQPRMQSLNhfqqqqqdvpfln
Low Complexity Region (SEG)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGekkwkcekcskkYAVQSDWKAHSKTCGTKEYKCDCGTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPInnhtennnnPLAHHELMPMPPKPFNTMAAASIFEssnnnlqqsaaasasaslsatallqkaaqMGATASNGSMMSSPMMHKSLVTSMAPPSFVAIPKDHQSLSAAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNNAALMKSLEHDESNKSGNNQSVLNNGDVMTVDFMGIGGSRTRNHFQQQQSQELKFGSGINNIGQPRMQSLNHFQQQQQDVPFLN
Disordered region (IsUnstruct)
****RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRRDSFITHRAFCDAL*****************************************************************************************************************************************************************NDVGMFYRFLDQN***************************VMTVDFMGI************************************************
Disordered Region (DISOPRED)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRRDSFITHRAFCDALAEESQKANQGL******V***ISSMP********************************************************ALLQKAAQM****************************************************************************************************************TVDFMGI**********************************************L*
Disordered Region (DISEMBL)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKK*************EKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSN****************ATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVAIPKDHQSLSAAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNNAALMKSLEHDESNKSGNNQSVLNNGDVMTVDFMGIGGSRTRNHFQQQQSQELKFGSGINNIGQPRMQSLNH************
Disordered Region (DISPRO)
***NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNNLQQSAAASASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVAIPKDHQS*S**********LSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNN*************************DVMTVDFMGIGGSRTRNHFQQQQSQELKFGSGINNIGQPRMQSLNHFQQQQQD**FL*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNNLQQSAAASASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVAIPKDHQSLSAAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNNAALMKSLEHDESNKSGNNQSVLNNGDVMTVDFMGIGGSRTRNHFQQQQSQELKFGSGINNIGQPRMQSLNHFQQQQQDVPFLN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	391	2.2.26 [Sep-21-2011]
Q9ZWA6	506	Zinc finger protein MAGPI	no	no	0.360	0.278	0.865	2e-77
Q9FFH3	466	Zinc finger protein NUTCR	no	no	0.360	0.302	0.843	3e-75
Q700D2	503	Zinc finger protein JACKD	no	no	0.355	0.276	0.842	2e-73
Q943I6	522	Zinc finger protein STOP1	no	no	0.329	0.247	0.347	2e-19
Q9C8N5	499	Protein SENSITIVE TO PROT	no	no	0.329	0.258	0.342	2e-18
Q2QX40	465	Zinc finger protein STAR3	no	no	0.329	0.277	0.340	3e-18
Q8VWG3	303	Protein TRANSPARENT TESTA	no	no	0.324	0.419	0.338	2e-14
O43313	823	ATM interactor OS=Homo sa	yes	no	0.204	0.097	0.365	2e-11
Q6P9S1	818	ATM interactor OS=Mus mus	yes	no	0.227	0.108	0.354	8e-11
Q7Z7L9	614	Zinc finger and SCAN doma	no	no	0.450	0.286	0.247	3e-08

>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1

 Score =  289 bits (740), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 122/141 (86%), Positives = 134/141 (95%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+QR++ E+RKRVYVCPE SCVHH+P 
Sbjct: 65  MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPT 124

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKCEKC+K+YAVQSDWKAHSKTCGT+EY+CDCGTIFSRR
Sbjct: 125 RALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 184

Query: 121 DSFITHRAFCDALAEESQKAN 141
           DSFITHRAFCDALAEE+ + N
Sbjct: 185 DSFITHRAFCDALAEETARLN 205

Probable transcription factor that regulates tissue boundaries and asymmetric cell division. Might be involved in the sequestration of 'SHORT-ROOT' to the nucleus.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1

 Score =  282 bits (721), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 119/141 (84%), Positives = 133/141 (94%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+QR++ E+RKRVYVCPE +CVHH+ +
Sbjct: 61  MATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSS 120

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKW CEKC+K+YAVQSDWKAHSKTCGT+EY+CDCGTIFSRR
Sbjct: 121 RALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 180

Query: 121 DSFITHRAFCDALAEESQKAN 141
           DSFITHRAFCDALAEE+ K N
Sbjct: 181 DSFITHRAFCDALAEETAKIN 201

Putative transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q700D2|JKD_ARATH Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1

 Score =  276 bits (706), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 118/140 (84%), Positives = 131/140 (93%), Gaps = 1/140 (0%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTE-IRKRVYVCPEPSCVHHNP 59
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QRS  E I+K+VY+CP  +CVHH+ 
Sbjct: 77  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDA 136

Query: 60  ARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSR 119
           +RALGDLTGIKKH+SRKHGEKKWKCEKCSKKYAVQSDWKAH+KTCGT+EYKCDCGT+FSR
Sbjct: 137 SRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSR 196

Query: 120 RDSFITHRAFCDALAEESQK 139
           +DSFITHRAFCDAL EE  +
Sbjct: 197 KDSFITHRAFCDALTEEGAR 216

Probable transcription factor that regulates tissue boundaries and asymmetric cell division by a rapid up-regulation of 'SCARECROW' (SCR), thus controlling the nuclear localization of 'SHORT-ROOT' (SHR) and restricting its action. Required for radial patterning and stem cell maintenance. Counteracted by 'MAGPIE' (MGP).

Arabidopsis thaliana (taxid: 3702)

>sp|Q943I6|STOP1_ORYSJ Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1

 Score = 97.1 bits (240), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 12/141 (8%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL--------RQRSTTEIRKRVYVCPEP 52
           +A +   C IC KGF+RD NL++H RGH   +K         +  S        Y CP  
Sbjct: 277 LAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYV 336

Query: 53  SCV---HHNPARALGDLTGIKKHFSRKHGEKKWKCEKC-SKKYAVQSDWKAHSKTCGTKE 108
            C     H   + L  +  +K H+ R H +K + C +C +KK++V +D K H K CG  +
Sbjct: 337 GCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDK 396

Query: 109 YKCDCGTIFSRRDSFITHRAF 129
           + C CGT FSR+D    H A 
Sbjct: 397 WLCSCGTTFSRKDKLFGHVAL 417

Probable transcription factor that may be involved in aluminum tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 14/143 (9%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRV----------YVCP 50
           +A +   C IC KGF+RD NL++H RGH   +K         ++ V          Y CP
Sbjct: 239 LAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCP 298

Query: 51  EPSCV---HHNPARALGDLTGIKKHFSRKHGEKKWKCEKC-SKKYAVQSDWKAHSKTCGT 106
              C     H   + L  +  +K H+ R H +K + C +C +KK++V +D K H K CG 
Sbjct: 299 FLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGK 358

Query: 107 KEYKCDCGTIFSRRDSFITHRAF 129
            ++ C CGT FSR+D    H A 
Sbjct: 359 NKWLCSCGTTFSRKDKLFGHIAL 381

Probable transcription factor. Plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q2QX40|ART1_ORYSJ Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 69/144 (47%), Gaps = 15/144 (10%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK-----------LRQRSTTEIRKRVYVC 49
           +A +   C IC KGF+RD NL++H RGH   +K                     +R Y C
Sbjct: 224 LAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQPERRYSC 283

Query: 50  PEPSCVH---HNPARALGDLTGIKKHFSRKHGEKKWKCEKC-SKKYAVQSDWKAHSKTCG 105
           P   C     H   + L  +  +K H+ R H EK+  C +C +K+++V +D K H K CG
Sbjct: 284 PHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCG 343

Query: 106 TKEYKCDCGTIFSRRDSFITHRAF 129
              + C CGT FSR+D    H A 
Sbjct: 344 RDRWLCSCGTSFSRKDKLFAHVAL 367

Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. Binds to the promoter of STAR1 and regulates transcript expression of STAR1 STAR2 and ART1 required for Al tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8VWG3|TT1_ARATH Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 12/139 (8%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKR------VYVCPEPSC 54
           +    F C +C K F R  NLQ+H  GH   ++    S    + R       Y C E  C
Sbjct: 140 IGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVE-GC 198

Query: 55  ---VHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKC 111
              + H  ++ L D   ++ H+ RKHG K + C  C K  AV+ DW+ H K CG K + C
Sbjct: 199 RNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCG-KRWVC 257

Query: 112 DCGTIFSRRDSFITH-RAF 129
            CG+ F  + S   H +AF
Sbjct: 258 VCGSDFKHKRSLKDHVKAF 276

May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat.

Arabidopsis thaliana (taxid: 3702)

>sp|O43313|ATMIN_HUMAN ATM interactor OS=Homo sapiens GN=ATMIN PE=1 SV=2

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 45  RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTC 104
           + Y CP   C    P R     + +K+HF + H EKK KC KCS  Y  + D K H++ C
Sbjct: 129 KFYCCPIEGC-PRGPERPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGTEWDLKRHAEDC 187

Query: 105 GTKEYKCDCGTIFSRRDSFITH 126
           G K ++C CG  ++ R +  +H
Sbjct: 188 G-KTFRCTCGCPYASRTALQSH 208

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Homo sapiens (taxid: 9606)

>sp|Q6P9S1|ATMIN_MOUSE ATM interactor OS=Mus musculus GN=Atmin PE=2 SV=2

 Score = 68.6 bits (166), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 34  LRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAV 93
           +R+  TT    + Y CP   C    P R     + +K+HF + H EKK KC KCS  Y  
Sbjct: 116 IRKDLTTA--PKFYCCPIKGC-PRGPDRPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGT 172

Query: 94  QSDWKAHSKTCGTKEYKCDCGTIFSRRDSFITH 126
           + D K H + CG K ++C CG  ++ R +  +H
Sbjct: 173 EWDLKRHEEDCG-KTFQCTCGCPYASRTALQSH 204

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Mus musculus (taxid: 10090)

>sp|Q7Z7L9|ZSCA2_HUMAN Zinc finger and SCAN domain-containing protein 2 OS=Homo sapiens GN=ZSCAN2 PE=2 SV=2

 Score = 60.1 bits (144), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 30/206 (14%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGD 65
           F C  C K F R  NL  H+R H               ++ Y CPE  C      ++ G+
Sbjct: 306 FQCAECGKSFSRSPNLIAHQRTHT-------------GEKPYSCPE--C-----GKSFGN 345

Query: 66  LTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDSF 123
            + +  H     GEK ++C++C + ++  S+   H +   G K YKC DCG  FS+  + 
Sbjct: 346 RSSLNTHQGIHTGEKPYECKECGESFSYNSNLIRHQRIHTGEKPYKCTDCGQRFSQSSAL 405

Query: 124 ITHRAF--------CDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHE 175
           ITHR          C    +   +++     +  H+ E      +   + + ++ L  H+
Sbjct: 406 ITHRRTHTGEKPYQCSECGKSFSRSSNLATHRRTHMVEKPYKCGVCGKSFSQSSSLIAHQ 465

Query: 176 LMPMPPKPFNTMAAASIFESSNNNLQ 201
            M    KP+  +     F  S+N L+
Sbjct: 466 GMHTGEKPYECLTCGESFSWSSNLLK 491

May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	391
118486051	437	unknown [Populus trichocarpa]	0.943	0.844	0.589	1e-126
296089673	513	unnamed protein product [Vitis vinifera]	0.951	0.725	0.586	1e-116
225450831	531	PREDICTED: zinc finger protein MAGPIE [V	0.951	0.700	0.563	1e-114
255542692	513	nucleic acid binding protein, putative [	0.890	0.678	0.529	1e-106
359479820	570	PREDICTED: zinc finger protein MAGPIE [V	0.956	0.656	0.495	1e-106
356576787	529	PREDICTED: zinc finger protein NUTCRACKE	0.828	0.612	0.532	1e-105
356533571	534	PREDICTED: zinc finger protein MAGPIE-li	0.843	0.617	0.535	1e-105
296086605	423	unnamed protein product [Vitis vinifera]	0.887	0.820	0.528	1e-104
255559270	631	nucleic acid binding protein, putative [	0.948	0.587	0.459	1e-100
357441697	530	Zinc finger protein-like protein [Medica	0.800	0.590	0.557	3e-95

>gi|118486051|gb|ABK94869.1| unknown [Populus trichocarpa]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/439 (58%), Positives = 297/439 (67%), Gaps = 70/439 (15%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QR+T EIRKRVYVCPEPSCVHHNPA
Sbjct: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTTAEIRKRVYVCPEPSCVHHNPA 60

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAH KTCGTKEYKCDCGTIFSRR
Sbjct: 61  RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHVKTCGTKEYKCDCGTIFSRR 120

Query: 121 DSFITHRAFCDALAEESQKANQGLNPQL-----GHVSEHISSMPINNHTENNN------- 168
           DSFITHRAFCDALAEE+ KANQGL P +     G VS  I SM INN+   +        
Sbjct: 121 DSFITHRAFCDALAEENTKANQGLMPNMEPNLQGQVSNLIPSMAINNNPNQSTMMSSFNH 180

Query: 169 ----NPLA-HHELMPMPPKPFN----TMAAASIFESSNN---NLQQSAAA---------- 206
               NPL+   ELMP PPKP +    +     +F  S +   +LQ +A +          
Sbjct: 181 LDAKNPLSLPQELMPTPPKPSSGSMFSNGTTGLFGGSRSMSPSLQLNANSSTIFEGNGLH 240

Query: 207 --SASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVAI-PKDHQSLS 263
             S SAS+SATALLQKAAQMGATAS+ + +SSPMM KS VTSMAPP+F  +  ++ QS  
Sbjct: 241 NLSGSASMSATALLQKAAQMGATASSNN-VSSPMMQKSFVTSMAPPTFGTMHTQNDQSHV 299

Query: 264 AAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNNAALMKSLEHDESN-- 321
                        + QFFSAN G    +S +ND+G+F   LDQNN +L K++EH  SN  
Sbjct: 300 IGGDD------GYANQFFSANGGVE--NSVLNDMGIFSAVLDQNN-SLFKTMEHASSNNE 350

Query: 322 ---------------KSGNNQSVL---NNGDVMTVDFMGIGGSRTRNHFQQQQSQELKFG 363
                           SG N S L   + GDVMTVDF+G+GGSR RN  QQ   QE++F 
Sbjct: 351 NVFQGANSNPGLSSPTSGANPSGLSRFSTGDVMTVDFLGLGGSRQRNLHQQHNHQEMEFT 410

Query: 364 SGINNIGQPRMQSLNHFQQ 382
            GI+    PRMQ LNHF+Q
Sbjct: 411 RGIS---HPRMQGLNHFEQ 426

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089673|emb|CBI39492.3| unnamed protein product [Vitis vinifera]

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/426 (58%), Positives = 285/426 (66%), Gaps = 54/426 (12%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+TEIRKRVYVCPEPSCVHHNPA
Sbjct: 82  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSTEIRKRVYVCPEPSCVHHNPA 141

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSKTCGT+EYKCDCGTIFSRR
Sbjct: 142 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRR 201

Query: 121 DSFITHRAFCDALAEESQKANQGL------NPQL-GHVSEHISSMPINN----------- 162
           DSFITHRAFCDALAEE+ K NQGL      N Q+ G VSE +SSMP+NN           
Sbjct: 202 DSFITHRAFCDALAEENTKVNQGLANTMRRNLQIQGQVSELLSSMPLNNNPNSTMGLSEF 261

Query: 163 -HTENNNN-PLAHHELMPMPPKPFNTMAAASIFESSNNNL------------QQSAAASA 208
            H+++ N+     HE MP+PPKP N MAAA +F +++ +L            QQ     A
Sbjct: 262 THSDSKNHLKTLPHEPMPVPPKPLN-MAAAGMFSTTSGSLFGCPITASFENGQQLPPPPA 320

Query: 209 SASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVAIPKDHQSLSAAAAS 268
           S  +SATALLQKAAQMGATAS     S P   K  VTSMAP  F  I     S S+    
Sbjct: 321 STLMSATALLQKAAQMGATASTKMNNSPP---KGFVTSMAPTPFGGILLQKNS-SSNDHH 376

Query: 269 MEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNNAALMKSLEHDESNKSGNN-- 326
           ++        QFF  N G AE S  M+++GMF    DQN+  L K++EH E + S N   
Sbjct: 377 LQADPTQFLNQFFYQNDG-AE-SEVMSEMGMFSGLFDQNH-GLFKNMEHHEHSNSNNILA 433

Query: 327 --------QSVLNNG--DVMTVDFMGIGGSRTRNHFQQQQSQELKFGSGINNIGQPRMQS 376
                    S   NG  D MTVDF+GIGG+R  N F  QQ Q+ +   G+ NI  PRMQ 
Sbjct: 434 AKTTNPGLSSTPRNGKTDTMTVDFLGIGGARPGN-FHGQQQQQQEMFEGM-NINHPRMQG 491

Query: 377 LNHFQQ 382
            + F+Q
Sbjct: 492 FSSFEQ 497

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450831|ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 250/444 (56%), Positives = 285/444 (64%), Gaps = 72/444 (16%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+TEIRKRVYVCPEPSCVHHNPA
Sbjct: 82  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSTEIRKRVYVCPEPSCVHHNPA 141

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSKTCGT+EYKCDCGTIFSRR
Sbjct: 142 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRR 201

Query: 121 DSFITHRAFCDALAEESQKANQGL------NPQL-GHVSEHISSMPINN----------- 162
           DSFITHRAFCDALAEE+ K NQGL      N Q+ G VSE +SSMP+NN           
Sbjct: 202 DSFITHRAFCDALAEENTKVNQGLANTMRRNLQIQGQVSELLSSMPLNNNPNSTMGLSEF 261

Query: 163 -HTENNNN-PLAHHELMPMPPKPFNTMAAASIFESSNNNL-------------------- 200
            H+++ N+     HE MP+PPKP N MAAA +F +++ +L                    
Sbjct: 262 THSDSKNHLKTLPHEPMPVPPKPLN-MAAAGMFSTTSGSLFGCPITASSPSSSSRLQLST 320

Query: 201 ----------QQSAAASASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPP 250
                     QQ     AS  +SATALLQKAAQMGATAS     S P   K  VTSMAP 
Sbjct: 321 NSSSPSFENGQQLPPPPASTLMSATALLQKAAQMGATASTKMNNSPP---KGFVTSMAPT 377

Query: 251 SFVAIPKDHQSLSAAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNNAA 310
            F  I     S S+    ++        QFF  N G AE S  M+++GMF    DQN+  
Sbjct: 378 PFGGILLQKNS-SSNDHHLQADPTQFLNQFFYQNDG-AE-SEVMSEMGMFSGLFDQNH-G 433

Query: 311 LMKSLEHDESNKSGNN----------QSVLNNG--DVMTVDFMGIGGSRTRNHFQQQQSQ 358
           L K++EH E + S N            S   NG  D MTVDF+GIGG+R  N F  QQ Q
Sbjct: 434 LFKNMEHHEHSNSNNILAAKTTNPGLSSTPRNGKTDTMTVDFLGIGGARPGN-FHGQQQQ 492

Query: 359 ELKFGSGINNIGQPRMQSLNHFQQ 382
           + +   G+ NI  PRMQ  + F+Q
Sbjct: 493 QQEMFEGM-NINHPRMQGFSSFEQ 515

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542692|ref|XP_002512409.1| nucleic acid binding protein, putative [Ricinus communis] gi|223548370|gb|EEF49861.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/446 (52%), Positives = 280/446 (62%), Gaps = 98/446 (21%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           +ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QR++TEIRKRVYVCPEPSCVHHNP 
Sbjct: 93  LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEIRKRVYVCPEPSCVHHNPG 152

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKHFSRKHGEKKWKC+KCSKKYAVQSDWKAH+KTCGTKEYKCDCGTIFSRR
Sbjct: 153 RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHAKTCGTKEYKCDCGTIFSRR 212

Query: 121 DSFITHRAFCDALAEESQKANQGLNP-QLGHVSE----HISSMPIN-------------- 161
           DSFITHRAFCDAL EE+ K NQGL P  +G   +    ++ SMPIN              
Sbjct: 213 DSFITHRAFCDALTEENNKGNQGLAPNNIGQSLQVQVTNLMSMPINNSNNQNSSEDQSSI 272

Query: 162 ----NHTENNNNPLAHHELMPMPPK-PFNTMAA--------------------------- 189
               NH +        HELMP P K P  T++A                           
Sbjct: 273 MSNFNHVDIKIPLSLPHELMPTPAKLPSGTLSASSTASLLGGARTAVSNSSSSSSSLQLN 332

Query: 190 ---ASIFESSNNNLQQSAAASASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLV-T 245
              ASIFE   N        ++SAS+SATALLQKAAQMGATAS+ + ++ PM HKS V T
Sbjct: 333 ASSASIFERKGN-------LASSASMSATALLQKAAQMGATASSNN-LNYPMTHKSFVIT 384

Query: 246 SMAPPSFVAIPKDHQSLSAAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLD 305
           SMAP +F ++   +  + ++   +        +QFF+AN             GMF   LD
Sbjct: 385 SMAPSTFASVQTQNDQIGSSDGYV--------SQFFNAN------------EGMFNGVLD 424

Query: 306 QNNAALMKSLEHDESN------KSGNNQSVLN--NGDVMTVDFMGIGGSRTRNHFQQQQS 357
             ++AL K    + SN        GNNQS L+  +GDVMTVDF+G+GGSR R+  + QQ 
Sbjct: 425 HQDSALFKIQGQESSNNKSFFGNGGNNQSGLSRFSGDVMTVDFLGVGGSRKRSIHEVQQK 484

Query: 358 QELKFGSGINNIGQPRMQSLNHFQQQ 383
            E++F  GI +        L HF+QQ
Sbjct: 485 PEMEF-IGIGH------HPLVHFEQQ 503

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479820|ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 234/472 (49%), Positives = 286/472 (60%), Gaps = 98/472 (20%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR+T EIRKRVY+CPEPSCVHHNPA
Sbjct: 91  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTNEIRKRVYICPEPSCVHHNPA 150

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKH+SRKHGEKKWKC+KCSKKYAVQSDWKAHSKTCGT+EYKCDCGTIFSRR
Sbjct: 151 RALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRR 210

Query: 121 DSFITHRAFCDALAEESQKANQGLNPQLG-----HVSEHISSMPINNHTE---------- 165
           DSFITHRAFCDALAEE+ K NQGL   +G      + E +SSMP+N+++           
Sbjct: 211 DSFITHRAFCDALAEENNKVNQGLMANMGSNLQSQMPELMSSMPLNSNSSPSVGISEFNS 270

Query: 166 -NNNNPLAH--HELMPMPPKPFNTMAAA------SIFESSN------------------- 197
            +  NPL     +L+PMP K  N           ++F                       
Sbjct: 271 YDPKNPLKSLPQDLVPMPFKSPNMSGGMFSSSSGTLFGGPRSISSSSSGLQLSSNSSSGF 330

Query: 198 NNLQQSAAA---SASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVA 254
           N LQ        S SA++SATALLQKAAQMGATASN   ++SPMM KS V+SMA P   +
Sbjct: 331 NYLQDGKNGTQLSGSANMSATALLQKAAQMGATASNS--INSPMMQKSFVSSMAAPELSS 388

Query: 255 I-PKDHQSLSAAAASMEEISLSSSAQ--FFSANIG-------------------HAEGSS 292
           I P  + ++     S +    S   Q      N G                      GS+
Sbjct: 389 IRPSPYVTIQQQTNSYDHHFQSQPDQSPLVGINGGGLPSQFLQKGPPEITPLFQTVSGSA 448

Query: 293 AMN-DVGMFYRFL---DQNNAALMKSLEHDESNKSGN---NQSVL-----------NNG- 333
           +MN D+GMF       DQN +  +K++E+++S+ + +    ++V+            NG 
Sbjct: 449 SMNNDIGMFGNVFIGGDQN-SPFLKNMENEDSSSTSSLAQGRTVMARSATGPSRFGGNGE 507

Query: 334 --DVMTVDFMGIGGSRTRNHFQQQQSQELKFGSGINNIGQPRMQSLNHFQQQ 383
             DV T+D +G+GGSR  N  +QQQ  EL+       + Q RMQ++  FQQQ
Sbjct: 508 GKDVTTLDLLGVGGSRPVNLQEQQQRLELEA------MSQHRMQAMTTFQQQ 553

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576787|ref|XP_003556511.1| PREDICTED: zinc finger protein NUTCRACKER-like [Glycine max]

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/406 (53%), Positives = 260/406 (64%), Gaps = 82/406 (20%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR++TEIRKRVYVCPEPSCVHHNPA
Sbjct: 87  MATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEIRKRVYVCPEPSCVHHNPA 146

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSK CGT+EYKCDCGTIFSRR
Sbjct: 147 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRR 206

Query: 121 DSFITHRAFCDALAEESQKANQGLNPQLG------HVSEHI-SSMPIN------------ 161
           DSFITHRAFCDALAEE+ KAN+G  P++G       +   + SS+PIN            
Sbjct: 207 DSFITHRAFCDALAEENNKANEGQLPKIGPNLQCQQIPNLVSSSLPINTNIVPNPQMGGT 266

Query: 162 ---NHTENNNNPLAHHELMPMPP-KPFNTMAAAS--------------------IFESSN 197
              NH ++ +     HELMPMP  K FN MAA +                    +FE + 
Sbjct: 267 SEFNHADHKHPLSLPHELMPMPAQKSFNNMAAGTTVFTRSLSSTSSPSLQLSSNMFEENG 326

Query: 198 NNLQQSAAASASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVAIPK 257
            +L     A+ S  +SATALLQKAAQMGAT +           K+ VT+MAPPSF  + +
Sbjct: 327 LHL-----AAGSPHMSATALLQKAAQMGATVT----------EKTFVTNMAPPSFGVLQQ 371

Query: 258 DHQSLSA---------AAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNN 308
            HQ  +          +    +++++S+    F AN G   GS  MN V MF   LDQ+ 
Sbjct: 372 HHQQPNGQPFMNQYMHSGQQQQDVNISAQYNSFGAN-GMGGGSVGMNGVDMFNAILDQSK 430

Query: 309 AALMKSLEHDESNKS------GNNQSVLN-------NGDVMTVDFM 341
            AL K +E +  + S      G+N S +N       +GDVMT+DF+
Sbjct: 431 -ALSKIMEQNNRSSSGGPTNGGSNSSAINVAGSKGGSGDVMTLDFL 475

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356533571|ref|XP_003535336.1| PREDICTED: zinc finger protein MAGPIE-like [Glycine max]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/407 (53%), Positives = 260/407 (63%), Gaps = 77/407 (18%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR++TEIRKRVYVCPEPSCVHHNPA
Sbjct: 87  MATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEIRKRVYVCPEPSCVHHNPA 146

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSK CGT+EYKCDCGTIFSRR
Sbjct: 147 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRR 206

Query: 121 DSFITHRAFCDALAEESQKANQGLNPQLG------HVSEHISSMPIN------------- 161
           DSFITHRAFCDALAEE+ KAN+G  P++G       +   +SS+PIN             
Sbjct: 207 DSFITHRAFCDALAEENNKANEGQLPKIGPNLQCQQIPNLVSSLPINTNSIVPNPAQMGG 266

Query: 162 -----NHTENNNNPLAHHELMPMPP-KPF-NTMAAASIFESSNNNLQQSAA--------- 205
                NH ++ +     HELMPMP  KPF N MAA ++F  S ++    +          
Sbjct: 267 TTSEFNHADHKHPLSLPHELMPMPAQKPFNNNMAAGTVFTRSLSSTSSPSLQLSSNMFDE 326

Query: 206 -----ASASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTSMAPPSFVAI----- 255
                A+ S  +SATALLQKAAQMGAT +  S         +  T+MAPPSF  +     
Sbjct: 327 NGLHLAAGSPHMSATALLQKAAQMGATLTEKS---------TFATNMAPPSFGVLQQHHH 377

Query: 256 -------PKDHQSL-SAAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQN 307
                  P  +Q + S      +E+++S+   F SAN G   GS  MN V MF   LDQ+
Sbjct: 378 HQQPNGQPFTNQYMHSGHHHQQQEVNISTQYSFGSAN-GMGGGSVGMNGVDMFNAILDQS 436

Query: 308 NAALMKSLEHDESNKS------GNNQSVLNN-------GDVMTVDFM 341
             AL K +E + +  S      G + S +NN       GDVMT+DF+
Sbjct: 437 K-ALSKIIEQNNNRSSSGGTTNGGSSSAINNVAGSKGSGDVMTLDFL 482

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086605|emb|CBI32240.3| unnamed protein product [Vitis vinifera]

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 225/426 (52%), Positives = 268/426 (62%), Gaps = 79/426 (18%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR+T EIRKRVY+CPEPSCVHHNPA
Sbjct: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTNEIRKRVYICPEPSCVHHNPA 60

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKH+SRKHGEKKWKC+KCSKKYAVQSDWKAHSKTCGT+EYKCDCGTIFSRR
Sbjct: 61  RALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTIFSRR 120

Query: 121 DSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMP 180
           DSFITHRAFCDALAEE+ K NQGL   +G  S   S MP               EL+   
Sbjct: 121 DSFITHRAFCDALAEENNKVNQGLMANMG--SNLQSQMP---------------ELISNS 163

Query: 181 PKPFNTMAAASIFESSNNNLQQSAAASASASLSATALLQKAAQMGATASNGSMMSSPMMH 240
              FN +      +   N  Q     S SA++SATALLQKAAQMGATASN   ++SPMM 
Sbjct: 164 SSGFNYL------QDGKNGTQ----LSGSANMSATALLQKAAQMGATASNS--INSPMMQ 211

Query: 241 KSLVTSMAPPSFVAI-PKDHQSLSAAAASMEEISLSSSAQ--FFSANIG----------- 286
           KS V+SMA P   +I P  + ++     S +    S   Q      N G           
Sbjct: 212 KSFVSSMAAPELSSIRPSPYVTIQQQTNSYDHHFQSQPDQSPLVGINGGGLPSQFLQKGP 271

Query: 287 --------HAEGSSAMN-DVGMFYRFL---DQNNAALMKSLEHDESNKS---GNNQSVL- 330
                      GS++MN D+GMF       DQN +  +K++E+++S+ +      ++V+ 
Sbjct: 272 PEITPLFQTVSGSASMNNDIGMFGNVFIGGDQN-SPFLKNMENEDSSSTSSLAQGRTVMA 330

Query: 331 ----------NNG---DVMTVDFMGIGGSRTRNHFQQQQSQELKFGSGINNIGQPRMQSL 377
                      NG   DV T+D +G+GGSR  N  +QQQ  EL+       + Q RMQ++
Sbjct: 331 RSATGPSRFGGNGEGKDVTTLDLLGVGGSRPVNLQEQQQRLELE------AMSQHRMQAM 384

Query: 378 NHFQQQ 383
             FQQQ
Sbjct: 385 TTFQQQ 390

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559270|ref|XP_002520655.1| nucleic acid binding protein, putative [Ricinus communis] gi|223540040|gb|EEF41617.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 239/520 (45%), Positives = 284/520 (54%), Gaps = 149/520 (28%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR+TTE++KRVY+CPEP+CVHHNPA
Sbjct: 109 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTEVKKRVYICPEPTCVHHNPA 168

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSR- 119
           RALGDLTGIKKHFSRKHGEKKWKC+KCSKKYAVQSDWKAH KTCGT+EYKCDCGTIFSR 
Sbjct: 169 RALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHQKTCGTREYKCDCGTIFSRI 228

Query: 120 ---------------------------RDSFITHRAFCDALAEESQKANQGLNPQ--LGH 150
                                      RDSFITHRAFCDALAEE+ K NQGL        
Sbjct: 229 YVPALVCNLALLSISLLTLLFNDQSCRRDSFITHRAFCDALAEENNKVNQGLTGSHLQNQ 288

Query: 151 VSEHISSMPINNHTENN-----------NNPLAH--HELMPMPPKPFNTMAAASIFESSN 197
           + E +SSMP+  +T  +            NPL     EL+PMP K  N   A  +F SS+
Sbjct: 289 MPELMSSMPLTTNTNTSIGISDFNSFDPKNPLKSLPQELVPMPFKSMN--MAGGMFSSSS 346

Query: 198 NNL------------------------------QQSAAASASASLSATALLQKAAQMGAT 227
             L                              +     S+SA +SATALLQKAAQMGAT
Sbjct: 347 GTLFGGPRSIASTSSSLQLSSNSSSGYNYLQDGKNGCQISSSAQMSATALLQKAAQMGAT 406

Query: 228 ASNGSMMSSPMMHKSLVTSMA--------------PPSFVAIPK-------DHQSLSAAA 266
           ASN   ++SPMM KS  +SMA              PPSF  + +       DH   S   
Sbjct: 407 ASNS--INSPMMQKSFASSMACPDQIIPIRPQLPRPPSFGGVQQHNNTTSYDHFPSSQLL 464

Query: 267 ASMEEISLSSS----------------AQFFSANIGHAEGSSAMNDVGMF---YRFLDQN 307
                + ++                  +QFF         SS M+D+GM    +   DQN
Sbjct: 465 DQTHLVGINGGGYNQPNGTLQKGQQEMSQFFDPT-----SSSGMSDMGMLSTMFMGTDQN 519

Query: 308 NAALMKSLEH--DESNKSGNNQSVLN-------------------NG---DVMTVDFMGI 343
               MK++EH  ++   SGN  S+++                   NG   D+MT DFMGI
Sbjct: 520 -PGFMKNIEHSNNDHQDSGNTTSLIHGRAHSMERTASGPSRLVGHNGESSDMMTRDFMGI 578

Query: 344 GGSRTRNHFQQQQSQELKFGSGINNIGQPRMQSLNHFQQQ 383
           GGSR  N  +QQQ Q+ +   G   + Q RM  ++HFQQQ
Sbjct: 579 GGSRPANLHEQQQQQQQRMEMGA--MSQQRMPMMSHFQQQ 616

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357441697|ref|XP_003591126.1| Zinc finger protein-like protein [Medicago truncatula] gi|355480174|gb|AES61377.1| Zinc finger protein-like protein [Medicago truncatula]

 Score =  354 bits (909), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 204/366 (55%), Positives = 238/366 (65%), Gaps = 53/366 (14%)

Query: 1   MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
           MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QR++ EIRKRVYVCPEPSCVHHNPA
Sbjct: 87  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSAEIRKRVYVCPEPSCVHHNPA 146

Query: 61  RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
           RALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSDWKAHSK CGT+EYKCDCGTIFSRR
Sbjct: 147 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRR 206

Query: 121 DSFITHRAFCDALAEESQKANQGLNPQLGH--VSEHISSMPI---------------NNH 163
           DSFITHRAFCDALAEE+ KAN+G+   L H  +S  +SS+P+               NNH
Sbjct: 207 DSFITHRAFCDALAEENNKANEGVLSNLQHQPISNLVSSLPLNPINNPQICGTVSEFNNH 266

Query: 164 TENNNNPLAHHELMPM--PPKPFNTMAAASIF------------------ESSNNNLQQS 203
           +++     + HELM M  PPKPFN     +IF                   S NN L+++
Sbjct: 267 SDHKLPLSSPHELMSMSVPPKPFNN----NIFTRSLSSSTSSPSLQLSSNNSLNNILEEN 322

Query: 204 A----AASASASLSATALLQKAAQMGATASNGSMMSSPMMHKSLVTS--MAPPSFVAIPK 257
                +A+ S  +SATALLQKAAQMGAT SN +  +  M  K+ V +  MAPP F  +  
Sbjct: 323 GSLHLSAATSPHMSATALLQKAAQMGATVSNNN--AGIMTDKTTVATNMMAPPQFGLV-- 378

Query: 258 DHQSLSAAAASMEEISLSSSAQFFSANIGHAEGSSAMNDVGMFYRFLDQNNAALMKSLEH 317
             Q   A      +         F+AN     G   MN V MF   LDQ + AL K +E 
Sbjct: 379 -QQQGHAFMNHYMQQQQQHYNNNFNANGIINGGGVGMNGVDMFNAILDQ-SKALSKIIEQ 436

Query: 318 DESNKS 323
           +   +S
Sbjct: 437 NNQTQS 442

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	391
TAIR|locus:2173624	500	IDD1 "AT5G66730" [Arabidopsis	0.355	0.278	0.827	4.6e-69
TAIR|locus:2101739	452	IDD2 "AT3G50700" [Arabidopsis	0.360	0.311	0.787	6.8e-67
TAIR|locus:2051698	602	IDD5 "AT2G02070" [Arabidopsis	0.383	0.249	0.726	3.7e-66
TAIR|locus:2051688	516	IDD4 "indeterminate(ID)-domain	0.488	0.370	0.588	6.8e-65
TAIR|locus:2204503	467	AT1G14580 "AT1G14580" [Arabido	0.355	0.297	0.769	7.7e-64
TAIR|locus:2132397	402	IDD12 "AT4G02670" [Arabidopsis	0.355	0.345	0.735	3.7e-62
TAIR|locus:2024193	506	MGP "AT1G03840" [Arabidopsis t	0.360	0.278	0.794	6.2e-62
TAIR|locus:2205672	455	IDD7 "AT1G55110" [Arabidopsis	0.358	0.307	0.787	1e-61
TAIR|locus:2167608	466	NUC "AT5G44160" [Arabidopsis t	0.360	0.302	0.780	3.4e-61
TAIR|locus:2143543	503	JKD "AT5G03150" [Arabidopsis t	0.355	0.276	0.757	5.4e-61

TAIR|locus:2173624 IDD1 "AT5G66730" [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 4.6e-69, Sum P(3) = 4.6e-69
 Identities = 115/139 (82%), Positives = 120/139 (86%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
             MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRST E+RK+VYVCP   CVHH+P+
Sbjct:    56 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPS 115

Query:    61 RALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
             RALGDLTGIKKHF RKHG            YAVQSDWKAHSK CGTKEYKCDCGT+FSRR
Sbjct:   116 RALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRR 175

Query:   121 DSFITHRAFCDALAEESQK 139
             DSFITHRAFCDALAEES K
Sbjct:   176 DSFITHRAFCDALAEESAK 194

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0009937 "regulation of gibberellic acid mediated signaling pathway" evidence=IMP

GO:0010029 "regulation of seed germination" evidence=IMP

GO:0010431 "seed maturation" evidence=IMP

TAIR|locus:2101739 IDD2 "AT3G50700" [Arabidopsis thaliana (taxid:3702)]

 Score = 630 (226.8 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
 Identities = 111/141 (78%), Positives = 123/141 (87%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
             +ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ+S  E++K+VYVCPE SCVHH+P+
Sbjct:    58 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPS 117

Query:    61 RALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
             RALGDLTGIKKHF RKHG            YAVQSDWKAHSK CGTKEYKCDCGT+FSRR
Sbjct:   118 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRR 177

Query:   121 DSFITHRAFCDALAEESQKAN 141
             DSFITHRAFCDALAEE+ +++
Sbjct:   178 DSFITHRAFCDALAEENARSH 198

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2051698 IDD5 "AT2G02070" [Arabidopsis thaliana (taxid:3702)]

 Score = 630 (226.8 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
 Identities = 109/150 (72%), Positives = 126/150 (84%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
             MATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q+ST E++++VY+CPEPSCVHH+P+
Sbjct:    76 MATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPS 135

Query:    61 RALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
             RALGDLTGIKKH+ RKHG            YAVQSDWKAHSKTCGTKEY+CDCGT+FSRR
Sbjct:   136 RALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTLFSRR 195

Query:   121 DSFITHRAFCDALAEESQKANQGLNPQLGH 150
             DSFITHRAFCDALA+ES +    L     H
Sbjct:   196 DSFITHRAFCDALAQESARHPTSLTSLPSH 225

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0006417 "regulation of translation" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2051688 IDD4 "indeterminate(ID)-domain 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 625 (225.1 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
 Identities = 113/192 (58%), Positives = 139/192 (72%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
             MATNRF+C++CNKGFQR+QNLQLHRRGHNLPWKL+Q+ST E++++VY+CPEP+CVHH+P+
Sbjct:    78 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 137

Query:    61 RALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
             RALGDLTGIKKH+ RKHG            YAVQSDWKAHSKTCGTKEY+CDCGTIFSRR
Sbjct:   138 RALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRR 197

Query:   121 DSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPIXXXXXXXXXPLAHHELMPMP 180
             DS+ITHRAFCDAL +E+ +        +   S  + S  I          L+HH L   P
Sbjct:   198 DSYITHRAFCDALIQETARNPTVSFTSMTAASSGVGSGGIYGRLGGGSA-LSHHHLSDHP 256

Query:   181 PKPFNTMAAASI 192
                FN +   ++
Sbjct:   257 NFGFNPLVGYNL 268

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2204503 AT1G14580 "AT1G14580" [Arabidopsis thaliana (taxid:3702)]

 Score = 622 (224.0 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
 Identities = 107/139 (76%), Positives = 122/139 (87%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
             MATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL+Q+S  E+R++VY+CPEPSCVHH+PA
Sbjct:    77 MATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPA 136

Query:    61 RALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
             RALGDLTGIKKH+ RKHG            YAVQSDWKAHSKTCGTKEY+CDCGTIFSRR
Sbjct:   137 RALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRR 196

Query:   121 DSFITHRAFCDALAEESQK 139
             DS+ITHRAFCDAL +ES +
Sbjct:   197 DSYITHRAFCDALIQESAR 215

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2132397 IDD12 "AT4G02670" [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
 Identities = 103/140 (73%), Positives = 120/140 (85%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEI-RKRVYVCPEPSCVHHNP 59
             +ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+Q++T E  +K+VYVCPE +C HH+P
Sbjct:    77 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPETNCAHHHP 136

Query:    60 ARALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSR 119
             +RALGDLTGIKKHF RKHG            YAVQSDWKAH+K CGT++Y+CDCGT+FSR
Sbjct:   137 SRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTKICGTRDYRCDCGTLFSR 196

Query:   120 RDSFITHRAFCDALAEESQK 139
             +D+FITHRAFCDALAEES +
Sbjct:   197 KDTFITHRAFCDALAEESAR 216

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2024193 MGP "AT1G03840" [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 112/141 (79%), Positives = 122/141 (86%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
             MATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+QR++ E+RKRVYVCPE SCVHH+P 
Sbjct:    65 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPT 124

Query:    61 RALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
             RALGDLTGIKKHF RKHG            YAVQSDWKAHSKTCGT+EY+CDCGTIFSRR
Sbjct:   125 RALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 184

Query:   121 DSFITHRAFCDALAEESQKAN 141
             DSFITHRAFCDALAEE+ + N
Sbjct:   185 DSFITHRAFCDALAEETARLN 205

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2205672 IDD7 "AT1G55110" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 111/141 (78%), Positives = 123/141 (87%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEI-RKRVYVCPEPSCVHHNP 59
             MATNRF+CE+CNKGFQRDQNLQLH+RGHNLPWKL+QRS  ++ RK+VYVCPEP CVHH+P
Sbjct:    87 MATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHP 146

Query:    60 ARALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSR 119
             +RALGDLTGIKKHF RKHG            YAVQSDWKAH+KTCGTKEYKCDCGT+FSR
Sbjct:   147 SRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEYKCDCGTLFSR 206

Query:   120 RDSFITHRAFCDALAEESQKA 140
             RDSFITHRAFCDALAEES +A
Sbjct:   207 RDSFITHRAFCDALAEESARA 227

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2167608 NUC "AT5G44160" [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 110/141 (78%), Positives = 122/141 (86%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPA 60
             MATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+QR++ E+RKRVYVCPE +CVHH+ +
Sbjct:    61 MATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSS 120

Query:    61 RALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRR 120
             RALGDLTGIKKHF RKHG            YAVQSDWKAHSKTCGT+EY+CDCGTIFSRR
Sbjct:   121 RALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRR 180

Query:   121 DSFITHRAFCDALAEESQKAN 141
             DSFITHRAFCDALAEE+ K N
Sbjct:   181 DSFITHRAFCDALAEETAKIN 201

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0010260 "organ senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2143543 JKD "AT5G03150" [Arabidopsis thaliana (taxid:3702)]

 Score = 597 (215.2 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
 Identities = 106/140 (75%), Positives = 119/140 (85%)

Query:     1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTE-IRKRVYVCPEPSCVHHNP 59
             MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+QRS  E I+K+VY+CP  +CVHH+ 
Sbjct:    77 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDA 136

Query:    60 ARALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSR 119
             +RALGDLTGIKKH+SRKHG            YAVQSDWKAH+KTCGT+EYKCDCGT+FSR
Sbjct:   137 SRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSR 196

Query:   120 RDSFITHRAFCDALAEESQK 139
             +DSFITHRAFCDAL EE  +
Sbjct:   197 KDSFITHRAFCDALTEEGAR 216

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0010075 "regulation of meristem growth" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0048364 "root development" evidence=IMP

GO:0051302 "regulation of cell division" evidence=IMP

GO:0045604 "regulation of epidermal cell differentiation" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00022744001 SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (531 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	391
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.91
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.85
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.78
KOG3608	467	consensus Zn finger proteins [General function pre	99.65
KOG3608	467	consensus Zn finger proteins [General function pre	99.65
KOG3576	267	consensus Ovo and related transcription factors [T	99.64
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.62
KOG3576	267	consensus Ovo and related transcription factors [T	99.43
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.38
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.36
PLN03086	567	PRLI-interacting factor K; Provisional	99.08
PLN03086	567	PRLI-interacting factor K; Provisional	98.97
PHA00733	128	hypothetical protein	98.78
PHA00733	128	hypothetical protein	98.73
KOG3993	500	consensus Transcription factor (contains Zn finger	98.63
PHA02768	55	hypothetical protein; Provisional	98.55
PHA02768	55	hypothetical protein; Provisional	98.35
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.3
KOG3993	500	consensus Transcription factor (contains Zn finger	98.28
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.25
PHA00616	44	hypothetical protein	97.83
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.65
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.57
PHA00732	79	hypothetical protein	97.55
PHA00616	44	hypothetical protein	97.5
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.49
PHA00732	79	hypothetical protein	97.37
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.13
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.02
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.01
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.91
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.81
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.13
smart00355	26	ZnF_C2H2 zinc finger.	96.08
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	95.76
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.75
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.73
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.37
COG5048	467	FOG: Zn-finger [General function prediction only]	95.09
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.06
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	94.89
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.46
KOG1146	1406	consensus Homeobox protein [General function predi	94.02
PRK04860	160	hypothetical protein; Provisional	93.82
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.61
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.6
PRK04860	160	hypothetical protein; Provisional	93.39
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.19
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.64
COG5236	493	Uncharacterized conserved protein, contains RING Z	92.41
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	92.23
smart00355	26	ZnF_C2H2 zinc finger.	91.5
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	91.07
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.91
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	90.87
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.83
KOG1146	1406	consensus Homeobox protein [General function predi	90.74
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	88.63
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	86.12
COG5048	467	FOG: Zn-finger [General function prediction only]	85.51
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	85.08
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	83.39
KOG2893	341	consensus Zn finger protein [General function pred	82.7
KOG2186	276	consensus Cell growth-regulating nucleolar protein	80.21

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.91  E-value=2.6e-25  Score=203.57  Aligned_cols=136  Identities=21%  Similarity=0.452  Sum_probs=126.2

Q ss_pred             CCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCc
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~   82 (391)
                      ...|+|..|+|.|.+..+|-+|..+|-          .....+.+.|++  |     +|.|...-.|+.|+|+|+  -++
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~----------~~~s~ka~~C~~--C-----~K~YvSmpALkMHirTH~--l~c  188 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHR----------SLDSKKAFSCKY--C-----GKVYVSMPALKMHIRTHT--LPC  188 (279)
T ss_pred             CCceeccccccccccccccchhhcccc----------cccccccccCCC--C-----CceeeehHHHhhHhhccC--CCc
Confidence            347999999999999999999999995          122478899999  9     999999999999999998  589


Q ss_pred             cCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCCCcCCchhhhhcccc
Q 016352           83 KCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPI  160 (391)
Q Consensus        83 ~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p~f~~~~~L~~H~~~  160 (391)
                      +|.+|||.|.+.--|+-|+|+ +|||||.|. |+|.|..+++|+.|++                                
T Consensus       189 ~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ--------------------------------  236 (279)
T KOG2462|consen  189 ECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ--------------------------------  236 (279)
T ss_pred             ccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHH--------------------------------
Confidence            999999999999999999999 899999999 9999999999999998                                


Q ss_pred             cCCCCCCCCccccccccCCCCCCccCCccccccCCchhHHhhhhc
Q 016352          161 NNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNNLQQSAA  205 (391)
Q Consensus       161 h~~e~~~~~~L~~H~~~htg~kp~~C~~C~~~F~~~~~L~~H~~~  205 (391)
                                      +|.+.|+|+|..|+|.|+.++-|.+|+..
T Consensus       237 ----------------THS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  237 ----------------THSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ----------------hhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence                            67789999999999999999999999954

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.85  E-value=4.8e-22  Score=182.23  Aligned_cols=104  Identities=28%  Similarity=0.583  Sum_probs=99.9

Q ss_pred             CCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCc
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~   82 (391)
                      .+-|.|+.|+|.|.....|+.|+|+|+               .+++|.+  |     ||.|.....|+-|+|+|+|||||
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHirTH~---------------l~c~C~i--C-----GKaFSRPWLLQGHiRTHTGEKPF  216 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIRTHT---------------LPCECGI--C-----GKAFSRPWLLQGHIRTHTGEKPF  216 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhhccC---------------CCccccc--c-----cccccchHHhhcccccccCCCCc
Confidence            567999999999999999999999996               5789999  9     99999999999999999999999


Q ss_pred             cCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHH
Q 016352           83 KCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRA  128 (391)
Q Consensus        83 ~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~  128 (391)
                      .|..|+|+|+.+++|+.|+++ .+.|+|+|. |+|+|...+.|.+|..
T Consensus       217 ~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  217 SCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             cCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            999999999999999999999 688999999 9999999999999996

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.78  E-value=3.7e-20  Score=189.88  Aligned_cols=49  Identities=24%  Similarity=0.609  Sum_probs=46.4

Q ss_pred             ccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHHh
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      -+|-+|-+...-++.|+.|.++ .||+||+|. |++.|.++.+|+.|+.+|
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vH  656 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVH  656 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhccccc
Confidence            4799999999999999999999 799999999 999999999999999876

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.65  E-value=1e-16  Score=150.76  Aligned_cols=170  Identities=19%  Similarity=0.320  Sum_probs=131.9

Q ss_pred             eec--cccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCcc
Q 016352            6 FVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWK   83 (391)
Q Consensus         6 f~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~   83 (391)
                      |.|  +.|+..|.....|..|+..|..-...............+.|.+..|     -+.|.+++.|.+|+|.|++||.-.
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~C-----t~~~~~k~~LreH~r~Hs~eKvvA  209 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMC-----TKHMGNKYRLREHIRTHSNEKVVA  209 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhh-----hhhhccHHHHHHHHHhcCCCeEEe
Confidence            556  6899999999999999999972111111112222345688999889     999999999999999999999999


Q ss_pred             CCcCccccCChhHHHHHHhh-c--CCCceecC-CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCC----CcCCchhhh
Q 016352           84 CEKCSKKYAVQSDWKAHSKT-C--GTKEYKCD-CGTIFSRRDSFITHRAFCDALAEESQKANQGLNP----QLGHVSEHI  155 (391)
Q Consensus        84 C~~C~k~F~~~~~L~~H~~~-~--gek~~~C~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p----~f~~~~~L~  155 (391)
                      |+.|+.-|.++..|-.|.+. +  ...+|.|. |.|.|.+...|+.|+..|         +..=..|    +....++|.
T Consensus       210 Cp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rH---------vn~ykCplCdmtc~~~ssL~  280 (467)
T KOG3608|consen  210 CPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRH---------VNCYKCPLCDMTCSSASSLT  280 (467)
T ss_pred             cchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHh---------hhcccccccccCCCChHHHH
Confidence            99999999999999999987 3  56799999 999999999999999854         1221222    567777787


Q ss_pred             hcccccCCCCCCCCccccccccCCCCCCccCCccccccCCchhHHhhhhc
Q 016352          156 SSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNNLQQSAA  205 (391)
Q Consensus       156 ~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~~C~~~F~~~~~L~~H~~~  205 (391)
                      .|++.                .|..+|||+|+.|++.|.+.+.|.+|...
T Consensus       281 ~H~r~----------------rHs~dkpfKCd~Cd~~c~~esdL~kH~~~  314 (467)
T KOG3608|consen  281 THIRY----------------RHSKDKPFKCDECDTRCVRESDLAKHVQV  314 (467)
T ss_pred             HHHHh----------------hhccCCCccccchhhhhccHHHHHHHHHh
Confidence            77775                44556777777777777777777777743

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.65  E-value=6.9e-17  Score=151.87  Aligned_cols=169  Identities=21%  Similarity=0.417  Sum_probs=132.6

Q ss_pred             eecc--ccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc--CCCC
Q 016352            6 FVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH--GEKK   81 (391)
Q Consensus         6 f~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~--~ekp   81 (391)
                      +.|.  .|-+.|..+..|++|++.|+             +++...|+.  |     +..|.++..|..|.+..+  ...+
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~Hs-------------~eKvvACp~--C-----g~~F~~~tkl~DH~rRqt~l~~n~  237 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTHS-------------NEKVVACPH--C-----GELFRTKTKLFDHLRRQTELNTNS  237 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhcC-------------CCeEEecch--H-----HHHhccccHHHHHHHhhhhhcCCc
Confidence            4564  69999999999999999998             888889988  8     888999988998987655  3567


Q ss_pred             ccCCcCccccCChhHHHHHHhhcCCCceecC-CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCC--------CcCCch
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFITHRAFCDALAEESQKANQGLNP--------QLGHVS  152 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p--------~f~~~~  152 (391)
                      |.|..|.|.|.+...|+.|+..| ..-|+|+ |+.+....++|.+|++.          .|...+|        .|...+
T Consensus       238 fqC~~C~KrFaTeklL~~Hv~rH-vn~ykCplCdmtc~~~ssL~~H~r~----------rHs~dkpfKCd~Cd~~c~~es  306 (467)
T KOG3608|consen  238 FQCAQCFKRFATEKLLKSHVVRH-VNCYKCPLCDMTCSSASSLTTHIRY----------RHSKDKPFKCDECDTRCVRES  306 (467)
T ss_pred             hHHHHHHHHHhHHHHHHHHHHHh-hhcccccccccCCCChHHHHHHHHh----------hhccCCCccccchhhhhccHH
Confidence            88888888888888888888774 2448888 88888888888888874          4555565        567778


Q ss_pred             hhhhcccccCCCCC------------CCCccccccc-cCCC--CCCccCCccccccCCchhHHhhhhc
Q 016352          153 EHISSMPINNHTEN------------NNNPLAHHEL-MPMP--PKPFNTMAAASIFESSNNNLQQSAA  205 (391)
Q Consensus       153 ~L~~H~~~h~~e~~------------~~~~L~~H~~-~htg--~kp~~C~~C~~~F~~~~~L~~H~~~  205 (391)
                      +|.+|..+|...--            ....+++|++ +|.|  +-+|.|..|++.|.+-.+|..|+..
T Consensus       307 dL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  307 DLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMK  374 (467)
T ss_pred             HHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHH
Confidence            88888877762211            4455667776 4445  4579999999999999999999944

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.64  E-value=9.3e-17  Score=140.72  Aligned_cols=111  Identities=25%  Similarity=0.599  Sum_probs=102.6

Q ss_pred             CCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCC
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp   81 (391)
                      +...|.|.+|+|.|.-..-|.+|++.|.             .-+.|.|..  |     +|.|.....|++|+|+|+|.+|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~-------------~vkr~lct~--c-----gkgfndtfdlkrh~rthtgvrp  173 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHS-------------DVKRHLCTF--C-----GKGFNDTFDLKRHTRTHTGVRP  173 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhcc-------------HHHHHHHhh--c-----cCcccchhhhhhhhccccCccc
Confidence            3457999999999999999999999998             678899999  9     9999999999999999999999


Q ss_pred             ccCCcCccccCChhHHHHHHhh-cC-----------CCceecC-CCCcccChhHHHHHHHHhhh
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT-CG-----------TKEYKCD-CGTIFSRRDSFITHRAFCDA  132 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~-~g-----------ek~~~C~-C~k~F~~~~~L~~H~~~h~~  132 (391)
                      |+|..|+|.|+++-.|..|++. ||           +|.|.|+ ||.+-.....+..|++.|+.
T Consensus       174 ykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  174 YKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             cchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            9999999999999999999987 75           4779999 99999999999999986654

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.62  E-value=5.6e-17  Score=166.76  Aligned_cols=76  Identities=18%  Similarity=0.390  Sum_probs=63.0

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhhcCCCc-------------eec
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKE-------------YKC  111 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek~-------------~~C  111 (391)
                      .+++|.+  |     +|.|...+.|+.|.|.|++|+||+|.+||.+|.++.+|+.|...|.++.             +.|
T Consensus       352 ~khkCr~--C-----akvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p~~~m~p~~~~e~l~~  424 (958)
T KOG1074|consen  352 FKHKCRF--C-----AKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKYPHVQMNPHPVQEHLQY  424 (958)
T ss_pred             ccchhhh--h-----HhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccCCccccCCCCchhhhcc
Confidence            3578999  9     9999999999999999999999999999999999999999998865542             356


Q ss_pred             C-CCCcccChhHHHHHH
Q 016352          112 D-CGTIFSRRDSFITHR  127 (391)
Q Consensus       112 ~-C~k~F~~~~~L~~H~  127 (391)
                      . |...|.+--+..-+.
T Consensus       425 ~i~st~~p~g~~vpp~k  441 (958)
T KOG1074|consen  425 VITSTGLPYGPSVPPEK  441 (958)
T ss_pred             eeeccccCCCCCCCCCC
Confidence            6 666666555544444

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.43  E-value=2.5e-14  Score=125.51  Aligned_cols=122  Identities=20%  Similarity=0.346  Sum_probs=104.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccCh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRR  120 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~  120 (391)
                      ....|.|.+  |     +|.|.....|.+|++-|...|.|.|..|||.|...-+|++|+++ +|.+||+|. |+|.|.++
T Consensus       114 d~d~ftCrv--C-----gK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqr  186 (267)
T KOG3576|consen  114 DQDSFTCRV--C-----GKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQR  186 (267)
T ss_pred             CCCeeeeeh--h-----hhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhh
Confidence            456899999  9     99999999999999999999999999999999999999999999 799999999 99999999


Q ss_pred             hHHHHHHHHhhhhhhhhhhhhcCCCC-CcCCchhhhhcccccCCCCCCCCccccccccCCCCCCccCCccccccCCchhH
Q 016352          121 DSFITHRAFCDALAEESQKANQGLNP-QLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNN  199 (391)
Q Consensus       121 ~~L~~H~~~h~~~~~~~~~~h~~~~p-~f~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~~C~~~F~~~~~L  199 (391)
                      -+|..|.+          ++|..... .|                            ....+|.|.|..||..-.+...+
T Consensus       187 csleshl~----------kvhgv~~~yay----------------------------kerr~kl~vcedcg~t~~~~e~~  228 (267)
T KOG3576|consen  187 CSLESHLK----------KVHGVQHQYAY----------------------------KERRAKLYVCEDCGYTSERPEVY  228 (267)
T ss_pred             ccHHHHHH----------HHcCchHHHHH----------------------------HHhhhheeeecccCCCCCChhHH
Confidence            99999998          34431110 00                            01146789999999999999999


Q ss_pred             HhhhhccCCC
Q 016352          200 LQQSAAASAS  209 (391)
Q Consensus       200 ~~H~~~~~~s  209 (391)
                      ..|++..++.
T Consensus       229 ~~h~~~~hp~  238 (267)
T KOG3576|consen  229 YLHLKLHHPF  238 (267)
T ss_pred             HHHHHhcCCC
Confidence            9999776654

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.38  E-value=9.9e-14  Score=140.88  Aligned_cols=79  Identities=24%  Similarity=0.638  Sum_probs=73.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccCh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRR  120 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~  120 (391)
                      ....|.|+.  |     +|.|...+.|.+|.--|+|.|||+|.+|.|+|..+.+|..|+|. .|||||+|+ |+|+|+..
T Consensus       891 e~gmyaCDq--C-----DK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHS  963 (1007)
T KOG3623|consen  891 EDGMYACDQ--C-----DKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHS  963 (1007)
T ss_pred             ccccchHHH--H-----HHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccc
Confidence            567899999  9     99999999999999999999999999999999999999999999 699999999 99999999


Q ss_pred             hHHHHHHH
Q 016352          121 DSFITHRA  128 (391)
Q Consensus       121 ~~L~~H~~  128 (391)
                      .++..||.
T Consensus       964 GSYSQHMN  971 (1007)
T KOG3623|consen  964 GSYSQHMN  971 (1007)
T ss_pred             cchHhhhc
Confidence            99999996

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.36  E-value=1.7e-13  Score=139.18  Aligned_cols=106  Identities=25%  Similarity=0.594  Sum_probs=95.1

Q ss_pred             eeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC-------
Q 016352            6 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG-------   78 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~-------   78 (391)
                      ..|..|...|++...|+.|++.-+           +..+.-|.|..  |     ...|.++..|.+|+.+|..       
T Consensus       211 ltcpycdrgykrltslkeHikyrh-----------ekne~nfsC~l--C-----sytFAyRtQLErhm~~hkpg~dqa~s  272 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRH-----------EKNEPNFSCML--C-----SYTFAYRTQLERHMQLHKPGGDQAIS  272 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHH-----------hhCCCCCcchh--h-----hhhhhhHHHHHHHHHhhcCCCccccc
Confidence            579999999999999999987654           12456788999  9     9999999999999999863       


Q ss_pred             ------CCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHH
Q 016352           79 ------EKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus        79 ------ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~  129 (391)
                            -|.|+|.+|+|+|..+.+|+.|+|+ .|||||.|+ |.|+|+...++..|+..
T Consensus       273 ltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  273 LTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             ccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence                  3679999999999999999999999 699999999 99999999999999963

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.08  E-value=4.6e-10  Score=115.05  Aligned_cols=138  Identities=16%  Similarity=0.285  Sum_probs=104.1

Q ss_pred             eccccccccCChhhHHHHHHhcC-----CC-cccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352            7 VCEICNKGFQRDQNLQLHRRGHN-----LP-WKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus         7 ~C~~C~k~F~~~~~L~~H~~~H~-----~~-~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      .|..|.+... ..+|..|.....     .| ..|.........++.+.|+.  |     ++.|. ...|..|+++|+  +
T Consensus       409 ~C~NC~~~i~-l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~--C-----gk~f~-~s~LekH~~~~H--k  477 (567)
T PLN03086        409 ECRNCKHYIP-SRSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEK--C-----GQAFQ-QGEMEKHMKVFH--E  477 (567)
T ss_pred             ECCCCCCccc-hhHHHHHHhhCCCcceeCCcccccceeeccccccCccCCC--C-----CCccc-hHHHHHHHHhcC--C
Confidence            6989988654 567778876654     12 12444444444567789999  9     99996 678999999986  7


Q ss_pred             CccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccC----------hhHHHHHHHHhhhhhhhhhhhhcCCCCCc
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSR----------RDSFITHRAFCDALAEESQKANQGLNPQL  148 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~----------~~~L~~H~~~h~~~~~~~~~~h~~~~p~f  148 (391)
                      ++.|+ |++.+ .+..|..|+.+ +.++++.|. |++.|..          .+.|..|..                    
T Consensus       478 pv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~--------------------  535 (567)
T PLN03086        478 PLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHES--------------------  535 (567)
T ss_pred             CccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHH--------------------
Confidence            99999 99755 67999999988 899999999 9999953          235666664                    


Q ss_pred             CCchhhhhcccccCCCCCCCCccccccccCCCCCCccCCccccccCCchhHHhhhhccC
Q 016352          149 GHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNNLQQSAAAS  207 (391)
Q Consensus       149 ~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~~C~~~F~~~~~L~~H~~~~~  207 (391)
                                                  . .|.+++.|..|++.|..+ .|..|+.+.+
T Consensus       536 ----------------------------~-CG~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        536 ----------------------------I-CGSRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             ----------------------------h-cCCcceEccccCCeeeeh-hHHHHHHHhh
Confidence                                        3 288999999999888765 5677775544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.97  E-value=1e-09  Score=112.46  Aligned_cols=101  Identities=22%  Similarity=0.493  Sum_probs=86.4

Q ss_pred             CCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCc
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~   82 (391)
                      ++.+.|+.|++.|. ...|..|++.|+               +++.|+   |     ++.+ .+..|..|+++|..++++
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H---------------kpv~Cp---C-----g~~~-~R~~L~~H~~thCp~Kpi  505 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH---------------EPLQCP---C-----GVVL-EKEQMVQHQASTCPLRLI  505 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC---------------CCccCC---C-----CCCc-chhHHHhhhhccCCCCce
Confidence            46788999999996 688999999874               578997   7     7655 678999999999999999


Q ss_pred             cCCcCccccC----------ChhHHHHHHhhcCCCceecC-CCCcccChhHHHHHHHH
Q 016352           83 KCEKCSKKYA----------VQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus        83 ~C~~C~k~F~----------~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~L~~H~~~  129 (391)
                      .|..|++.|.          ....|..|...+|.+++.|. |++.|..+ .+..|+..
T Consensus       506 ~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        506 TCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             eCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh-hHHHHHHH
Confidence            9999999995          24589999999999999999 99998765 56788874

>PHA00733 hypothetical protein

Probab=98.78  E-value=4.8e-09  Score=88.52  Aligned_cols=79  Identities=14%  Similarity=0.283  Sum_probs=66.4

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHH--HH---HhcCCCCccCCcCccccCChhHHHHHHhhcCCCceecC-CCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKH--FS---RKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTI  116 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H--~~---~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~  116 (391)
                      ..+++.|.+  |     .+.|.....|..+  ++   .+++++||.|+.|++.|.....|..|++.+ +.+|.|. |++.
T Consensus        37 ~~~~~~~~~--~-----~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~  108 (128)
T PHA00733         37 EQKRLIRAV--V-----KTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKE  108 (128)
T ss_pred             hhhhHHHHH--H-----hhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCc
Confidence            568899999  8     7777777666655  22   334588999999999999999999999875 4679999 9999


Q ss_pred             ccChhHHHHHHHH
Q 016352          117 FSRRDSFITHRAF  129 (391)
Q Consensus       117 F~~~~~L~~H~~~  129 (391)
                      |.....|..|++.
T Consensus       109 F~~~~sL~~H~~~  121 (128)
T PHA00733        109 FRNTDSTLDHVCK  121 (128)
T ss_pred             cCCHHHHHHHHHH
Confidence            9999999999974

>PHA00733 hypothetical protein

Probab=98.73  E-value=1.2e-08  Score=86.08  Aligned_cols=84  Identities=19%  Similarity=0.273  Sum_probs=70.2

Q ss_pred             CCceeccccccccCChhhHHHH--HHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLH--RRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H--~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      .+++.|.+|.+.|.....|..|  ++.|.          .....++|+|+.  |     ++.|.....|..|++.|  +.
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~----------~~~~~kPy~C~~--C-----gk~Fss~s~L~~H~r~h--~~   98 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLL----------TSKAVSPYVCPL--C-----LMPFSSSVSLKQHIRYT--EH   98 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhc----------ccCCCCCccCCC--C-----CCcCCCHHHHHHHHhcC--Cc
Confidence            5789999999999988777766  33331          112578999999  9     99999999999999987  45


Q ss_pred             CccCCcCccccCChhHHHHHHhh-cC
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT-CG  105 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~-~g  105 (391)
                      +|.|..|++.|.....|..|+.. |+
T Consensus        99 ~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         99 SKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcC
Confidence            79999999999999999999987 65

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.63  E-value=1.2e-08  Score=98.78  Aligned_cols=158  Identities=15%  Similarity=0.291  Sum_probs=103.9

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhhcCCC------------------
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTK------------------  107 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek------------------  107 (391)
                      .|.|..  |     ...|.+...|.+|+-.-.-.--|+|++|+|.|.-..+|..|.|+|..+                  
T Consensus       267 dyiCqL--C-----K~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~r  339 (500)
T KOG3993|consen  267 DYICQL--C-----KEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETR  339 (500)
T ss_pred             HHHHHH--H-----HHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhh
Confidence            489999  9     899999999999975333333599999999999999999999986311                  


Q ss_pred             ----------------ceecC-CCCcccChhHHHHHHHHhhhhhhhhhhhh----cCCCCCcCCchhhhhcccc-cC---
Q 016352          108 ----------------EYKCD-CGTIFSRRDSFITHRAFCDALAEESQKAN----QGLNPQLGHVSEHISSMPI-NN---  162 (391)
Q Consensus       108 ----------------~~~C~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h----~~~~p~f~~~~~L~~H~~~-h~---  162 (391)
                                      .|.|. |+|.|.++..|+.|+..|+.......+.-    ....+.|.....+..|... +.   
T Consensus       340 ae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~  419 (500)
T KOG3993|consen  340 AEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGD  419 (500)
T ss_pred             hhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhccccccccccccccccccccccc
Confidence                            28999 99999999999999998866433221100    0000011111111122211 00   


Q ss_pred             -----------------CCCC-CCCccccccccCCCCCCccCCccccccCCchhHHhhhhccCCCc
Q 016352          163 -----------------HTEN-NNNPLAHHELMPMPPKPFNTMAAASIFESSNNNLQQSAAASASA  210 (391)
Q Consensus       163 -----------------~e~~-~~~~L~~H~~~htg~kp~~C~~C~~~F~~~~~L~~H~~~~~~s~  210 (391)
                                       +..+ .+..--.+.+.-..+.-|.|.+|...|.+...|.+|....+.+.
T Consensus       420 ~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  420 EVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             ceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence                             0000 22222233333334567999999999999999999998877764

>PHA02768 hypothetical protein; Provisional

Probab=98.55  E-value=2.5e-08  Score=70.35  Aligned_cols=43  Identities=16%  Similarity=0.427  Sum_probs=25.7

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHH
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDW   97 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L   97 (391)
                      -|.|++  |     ++.|...+.|..|+++|+  ++|+|..|++.|.+.+.|
T Consensus         5 ~y~C~~--C-----GK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPI--C-----GEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcch--h-----CCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            356666  6     666666666666666665  456666666666554443

>PHA02768 hypothetical protein; Provisional

Probab=98.35  E-value=2.3e-07  Score=65.54  Aligned_cols=43  Identities=21%  Similarity=0.475  Sum_probs=39.8

Q ss_pred             CccCCcCccccCChhHHHHHHhhcCCCceecC-CCCcccChhHHH
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFI  124 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~L~  124 (391)
                      .|+|++||+.|...+.|..|+++|. ++|+|. |++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceecccceeE
Confidence            4899999999999999999999965 899999 999999988876

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.30  E-value=4e-07  Score=54.81  Aligned_cols=26  Identities=31%  Similarity=0.824  Sum_probs=22.6

Q ss_pred             HHHHHHHHhcCCCCccCCcCccccCC
Q 016352           68 GIKKHFSRKHGEKKWKCEKCSKKYAV   93 (391)
Q Consensus        68 ~L~~H~~~H~~ekp~~C~~C~k~F~~   93 (391)
                      +|.+|+++|++++||.|++|++.|..
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47889999999999999999998863

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.28  E-value=1.9e-07  Score=90.67  Aligned_cols=79  Identities=23%  Similarity=0.534  Sum_probs=65.1

Q ss_pred             eeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC-------
Q 016352            6 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG-------   78 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~-------   78 (391)
                      |.|..|...|.+-..|.+|.-.-.             ....|+|++  |     +|.|+-..+|..|+|+|..       
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RI-------------V~vEYrCPE--C-----~KVFsCPANLASHRRWHKPR~eaa~a  327 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRI-------------VHVEYRCPE--C-----DKVFSCPANLASHRRWHKPRPEAAKA  327 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCee-------------EEeeecCCc--c-----cccccCchhhhhhhcccCCchhhhhc
Confidence            889999999999999998853322             456799999  9     9999999999999999852       


Q ss_pred             --------------------------CCCccCCcCccccCChhHHHHHHhhc
Q 016352           79 --------------------------EKKWKCEKCSKKYAVQSDWKAHSKTC  104 (391)
Q Consensus        79 --------------------------ekp~~C~~C~k~F~~~~~L~~H~~~~  104 (391)
                                                +.-|.|.+|+|.|.++..|+.|+.+|
T Consensus       328 ~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlth  379 (500)
T KOG3993|consen  328 GSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTH  379 (500)
T ss_pred             CCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhh
Confidence                                      11388999999999999999997663

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.25  E-value=9.6e-08  Score=57.51  Aligned_cols=26  Identities=19%  Similarity=0.252  Sum_probs=23.1

Q ss_pred             ccccccccCCCCCCccCCccccccCC
Q 016352          170 PLAHHELMPMPPKPFNTMAAASIFES  195 (391)
Q Consensus       170 ~L~~H~~~htg~kp~~C~~C~~~F~~  195 (391)
                      +|..|+++|++++||+|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            36788899999999999999999974

...

>PHA00616 hypothetical protein

Probab=97.83  E-value=7.1e-06  Score=55.23  Aligned_cols=34  Identities=12%  Similarity=0.247  Sum_probs=31.3

Q ss_pred             ceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPE   51 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~   51 (391)
                      ||+|..||+.|..+++|..|++.|+             +++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h-------------g~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH-------------KQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc-------------CCCccceeE
Confidence            7999999999999999999999998             788888765

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.65  E-value=2.9e-05  Score=73.22  Aligned_cols=73  Identities=14%  Similarity=0.301  Sum_probs=50.7

Q ss_pred             CCCceecC---CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCCCcCCchhhhhcccccCCCCCCCCccccccccCCCC
Q 016352          105 GTKEYKCD---CGTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPP  181 (391)
Q Consensus       105 gek~~~C~---C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p~f~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~  181 (391)
                      ++|||+|+   |.|.|.....|+.|+.            |-...            .++|....     -..|...-...
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~l------------hGH~~------------~~~~~~p~-----p~~~~~F~~~~  396 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHML------------HGHQN------------QKLHENPS-----PEKMNIFSAKD  396 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhh------------ccccC------------cccCCCCC-----ccccccccccC
Confidence            56999997   9999999999999995            11100            11121111     11122233457


Q ss_pred             CCccCCccccccCCchhHHhhhhcc
Q 016352          182 KPFNTMAAASIFESSNNNLQQSAAA  206 (391)
Q Consensus       182 kp~~C~~C~~~F~~~~~L~~H~~~~  206 (391)
                      |||.|++|+|+|++..-|+.|+...
T Consensus       397 KPYrCevC~KRYKNlNGLKYHr~Hs  421 (423)
T COG5189         397 KPYRCEVCDKRYKNLNGLKYHRKHS  421 (423)
T ss_pred             CceeccccchhhccCccceeccccc
Confidence            9999999999999999999998654

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.57  E-value=2.1e-05  Score=74.06  Aligned_cols=69  Identities=22%  Similarity=0.542  Sum_probs=40.1

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc-CCCCccCC--cCccccCChhHHHHHHhhcCCCceecC-CCCccc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKCE--KCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFS  118 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~-~ekp~~C~--~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~  118 (391)
                      .+|||+|++++|     .|.+.+...|+-|+.--| ..+...-+  +--..|           .-..|||.|+ |+|+|.
T Consensus       346 d~KpykCpV~gC-----~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F-----------~~~~KPYrCevC~KRYK  409 (423)
T COG5189         346 DGKPYKCPVEGC-----NKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF-----------SAKDKPYRCEVCDKRYK  409 (423)
T ss_pred             cCceecCCCCCc-----hhhhccccchhhhhhccccCcccCCCCCccccccc-----------cccCCceeccccchhhc
Confidence            357888888778     888888888887765322 11110000  000011           0244777777 777777


Q ss_pred             ChhHHHHHH
Q 016352          119 RRDSFITHR  127 (391)
Q Consensus       119 ~~~~L~~H~  127 (391)
                      ....|+.|+
T Consensus       410 NlNGLKYHr  418 (423)
T COG5189         410 NLNGLKYHR  418 (423)
T ss_pred             cCccceecc
Confidence            777777776

>PHA00732 hypothetical protein

Probab=97.55  E-value=5.1e-05  Score=58.43  Aligned_cols=47  Identities=28%  Similarity=0.557  Sum_probs=29.3

Q ss_pred             ceeccccccccCChhhHHHHHHh-cCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRG-HNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      ||.|+.|++.|.+...|+.|++. |.                ++.|+.  |     ++.|.   .|..|.+++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~----------------~~~C~~--C-----gKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT----------------LTKCPV--C-----NKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC----------------CCccCC--C-----CCEeC---ChhhhhcccC
Confidence            56777777777777777777664 32                235776  6     67665   3556664443

>PHA00616 hypothetical protein

Probab=97.50  E-value=4.6e-05  Score=51.34  Aligned_cols=34  Identities=21%  Similarity=0.419  Sum_probs=23.9

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      +|+|+.  |     |+.|..++.|.+|++.|++++++.|+.
T Consensus         1 pYqC~~--C-----G~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLR--C-----GGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccch--h-----hHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            466777  7     777777777777777777777777654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.49  E-value=6.6e-05  Score=43.47  Aligned_cols=23  Identities=43%  Similarity=0.908  Sum_probs=21.7

Q ss_pred             eeccccccccCChhhHHHHHHhc
Q 016352            6 FVCEICNKGFQRDQNLQLHRRGH   28 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~H   28 (391)
                      |+|+.|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            79999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.37  E-value=0.00014  Score=55.98  Aligned_cols=45  Identities=29%  Similarity=0.567  Sum_probs=33.4

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHH-hcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSR-KHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~-H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      +|.|+.  |     ++.|.....|..|++. |.   ++.|+.|++.|.   .+..|.++
T Consensus         1 py~C~~--C-----gk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPI--C-----GFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCC--C-----CCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            467888  8     8888888888888874 44   357888888887   46777755

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.13  E-value=0.00067  Score=48.24  Aligned_cols=52  Identities=23%  Similarity=0.525  Sum_probs=27.0

Q ss_pred             ceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      .|.|+.|++ .-+...|..|....+.           ...+.+.|++  |     ...+.  ..|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~-----------~~~~~v~CPi--C-----~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHR-----------SESKNVVCPI--C-----SSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCc-----------CCCCCccCCC--c-----hhhhh--hHHHHHHHHhc
Confidence            366666666 3445566666544431           0233566666  6     44332  35666665544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.02  E-value=0.00039  Score=41.88  Aligned_cols=25  Identities=36%  Similarity=0.711  Sum_probs=23.6

Q ss_pred             ceeccccccccCChhhHHHHHHhcC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            7999999999999999999999885

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.01  E-value=0.00051  Score=39.67  Aligned_cols=24  Identities=42%  Similarity=0.901  Sum_probs=20.3

Q ss_pred             eeccccccccCChhhHHHHHHhcC
Q 016352            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |.|++|++.|.+...|..|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998873

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.91  E-value=0.0006  Score=54.15  Aligned_cols=72  Identities=18%  Similarity=0.434  Sum_probs=15.7

Q ss_pred             eccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352            7 VCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus         7 ~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      +|..|+..|.....|..|+...+.             -   ..+.        ...+.....+..+.+... ...|.|..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~-------------~---~~~~--------~~~l~~~~~~~~~~~~~~-~~~~~C~~   55 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHG-------------F---DIPD--------QKYLVDPNRLLNYLRKKV-KESFRCPY   55 (100)
T ss_dssp             -------------------------------------------------------------------------SSEEBSS
T ss_pred             Cccccccccccccccccccccccc-------------c---cccc--------cccccccccccccccccc-CCCCCCCc
Confidence            478888888888888888755440             0   0011        111122223333332221 12567777


Q ss_pred             CccccCChhHHHHHHhh
Q 016352           87 CSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        87 C~k~F~~~~~L~~H~~~  103 (391)
                      |++.|.....|..|++.
T Consensus        56 C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   56 CNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SS-EESSHHHHHHHHHH
T ss_pred             cCCCCcCHHHHHHHHcC
Confidence            77777777777777765

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.81  E-value=0.0021  Score=45.63  Aligned_cols=47  Identities=23%  Similarity=0.557  Sum_probs=24.2

Q ss_pred             eecCCCCCCCCCCCCccCCHHHHHHHHHHhcC-C-CCccCCcCccccCChhHHHHHHhh
Q 016352           47 YVCPEPSCVHHNPARALGDLTGIKKHFSRKHG-E-KKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        47 ~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~-e-kp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |.|++  |     ++. .+...|..|....+. + +.+.|++|...+.  .+|..|+..
T Consensus         3 f~CP~--C-----~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPY--C-----GKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCC--C-----CCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            55666  6     553 334556666544332 2 3456666665433  255556554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.13  E-value=0.0051  Score=35.33  Aligned_cols=16  Identities=19%  Similarity=0.580  Sum_probs=8.7

Q ss_pred             CCccCCHHHHHHHHHH
Q 016352           60 ARALGDLTGIKKHFSR   75 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~   75 (391)
                      ++.|.+...|..|++.
T Consensus         7 ~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    7 GKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             TEEESSHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHhH
Confidence            5555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>smart00355 ZnF_C2H2 zinc finger

Probab=96.08  E-value=0.0038  Score=36.37  Aligned_cols=24  Identities=33%  Similarity=0.670  Sum_probs=22.1

Q ss_pred             eeccccccccCChhhHHHHHHhcC
Q 016352            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999774

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=95.76  E-value=0.019  Score=60.54  Aligned_cols=107  Identities=17%  Similarity=0.355  Sum_probs=67.4

Q ss_pred             eecccccccc---------------CChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCC-----CCCCccCC
Q 016352            6 FVCEICNKGF---------------QRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHH-----NPARALGD   65 (391)
Q Consensus         6 f~C~~C~k~F---------------~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~-----~~~k~F~~   65 (391)
                      +.|.+|++.|               .....|+.|++.-+               +.+.|..  |...     .-.+.| +
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H---------------~~~~c~l--C~~~~kif~~e~k~Y-t  161 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQH---------------KLHLCSL--CLQNLKIFINERKLY-T  161 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhh---------------hhhcccc--ccccceeeeeeeehe-h
Confidence            4566666665               36778999985443               2344444  2111     003333 4


Q ss_pred             HHHHHHHHHHh-cCCCC----ccCCcCccccCChhHHHHHHhhcCCCceec---C-CCCcccChhHHHHHHHHh
Q 016352           66 LTGIKKHFSRK-HGEKK----WKCEKCSKKYAVQSDWKAHSKTCGTKEYKC---D-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus        66 ~~~L~~H~~~H-~~ekp----~~C~~C~k~F~~~~~L~~H~~~~gek~~~C---~-C~k~F~~~~~L~~H~~~h  130 (391)
                      ...|..|+..- .+++-    -.|..|...|.....|.+|++.+.+--+-|   + ++..|.....|..|.+..
T Consensus       162 ~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  162 RAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             HHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhc
Confidence            56677776642 22222    469999999999999999998832222334   2 567888899999999843

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.75  E-value=0.0067  Score=48.03  Aligned_cols=71  Identities=17%  Similarity=0.338  Sum_probs=20.2

Q ss_pred             ecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhhcCCCceecC-CCCcccChhHHHHH
Q 016352           48 VCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFITH  126 (391)
Q Consensus        48 ~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~L~~H  126 (391)
                      +|..  |     +..|.+...|..|+...++-..-    ....+.....+..+.+..-...+.|. |++.|.+...|..|
T Consensus         1 ~C~~--C-----~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~H   69 (100)
T PF12756_consen    1 QCLF--C-----DESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEH   69 (100)
T ss_dssp             -----------------------------------------------------------SSEEBSSSS-EESSHHHHHHH
T ss_pred             Cccc--c-----ccccccccccccccccccccccc----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHH
Confidence            4778  8     99999999999999876653211    11222234444444444223469999 99999999999999


Q ss_pred             HHH
Q 016352          127 RAF  129 (391)
Q Consensus       127 ~~~  129 (391)
                      ++.
T Consensus        70 m~~   72 (100)
T PF12756_consen   70 MRS   72 (100)
T ss_dssp             HHH
T ss_pred             HcC
Confidence            984

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.73  E-value=0.0062  Score=35.75  Aligned_cols=23  Identities=43%  Similarity=0.980  Sum_probs=21.4

Q ss_pred             eeccccccccCChhhHHHHHHhc
Q 016352            6 FVCEICNKGFQRDQNLQLHRRGH   28 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~H   28 (391)
                      |.|++|++.|.++..|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            78999999999999999999865

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.37  E-value=0.017  Score=32.97  Aligned_cols=17  Identities=6%  Similarity=0.378  Sum_probs=8.6

Q ss_pred             CCccCCHHHHHHHHHHh
Q 016352           60 ARALGDLTGIKKHFSRK   76 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H   76 (391)
                      ++.|.+...|+.|++.|
T Consensus         7 ~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    7 GKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             S-EESSHHHHHHHHHHH
T ss_pred             CCcCCcHHHHHHHHHhh
Confidence            55555555555555544

...

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.09  E-value=0.0057  Score=60.92  Aligned_cols=52  Identities=19%  Similarity=0.357  Sum_probs=29.0

Q ss_pred             CCccCCHHHHHHHHH--HhcCC--CCccCC--cCccccCChhHHHHHHhh-cCCCceec
Q 016352           60 ARALGDLTGIKKHFS--RKHGE--KKWKCE--KCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~--~H~~e--kp~~C~--~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      ...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|... .+.+++.|
T Consensus       296 ~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         296 NISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             cCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            555555555555555  55555  555555  466666555555555555 34444444

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.06  E-value=0.018  Score=39.82  Aligned_cols=23  Identities=13%  Similarity=0.290  Sum_probs=8.0

Q ss_pred             CccCCcCccccCChhHHHHHHhh
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |-.|++|+..+.+..+|++|+..
T Consensus        24 PatCP~C~a~~~~srnLrRHle~   46 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEI   46 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHH
T ss_pred             CCCCCcchhhccchhhHHHHHHH
Confidence            33444444444444444444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=94.89  E-value=0.019  Score=34.33  Aligned_cols=17  Identities=12%  Similarity=0.438  Sum_probs=9.6

Q ss_pred             CCccCCHHHHHHHHHHh
Q 016352           60 ARALGDLTGIKKHFSRK   76 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H   76 (391)
                      ++.|.+...|..|++.|
T Consensus         8 ~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    8 GKTFSSLSALREHKRSH   24 (27)
T ss_dssp             TEEESSHHHHHHHHCTT
T ss_pred             CCccCChhHHHHHhHHh
Confidence            55555555555555544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.46  E-value=0.022  Score=54.79  Aligned_cols=125  Identities=19%  Similarity=0.350  Sum_probs=84.0

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCc---ccc------CChhHHHHHHhh-cCC---C-ceec
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCS---KKY------AVQSDWKAHSKT-CGT---K-EYKC  111 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~---k~F------~~~~~L~~H~~~-~ge---k-~~~C  111 (391)
                      .|.|+..-|     .........|+.|.+..|+  .+-|.+|-   +.|      .++..|..|... ..+   | .-.|
T Consensus       151 ~F~CP~skc-----~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C  223 (493)
T COG5236         151 SFKCPKSKC-----HRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLC  223 (493)
T ss_pred             HhcCCchhh-----hhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchh
Confidence            478887667     7777778899999988775  36677763   333      355677777765 222   2 2369


Q ss_pred             C-CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCC------CcCCchhhhhcccccCCCCCCCCccccccccCCCCCCc
Q 016352          112 D-CGTIFSRRDSFITHRAFCDALAEESQKANQGLNP------QLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPF  184 (391)
Q Consensus       112 ~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p------~f~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~  184 (391)
                      . |.+.|-.-+.|..|.|.      .+.++|-+.+-      .|.+-..|..|.+-                     -.|
T Consensus       224 ~FC~~~FYdDDEL~~HcR~------~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~---------------------~hy  276 (493)
T COG5236         224 IFCKIYFYDDDELRRHCRL------RHEACHICDMVGPIRYQYFKSYEDLEAHFRN---------------------AHY  276 (493)
T ss_pred             hhccceecChHHHHHHHHh------hhhhhhhhhccCccchhhhhCHHHHHHHhhc---------------------Cce
Confidence            9 99999999999999983      34445544332      45666666666542                     226


Q ss_pred             cCCc--cc----cccCCchhHHhhhh
Q 016352          185 NTMA--AA----SIFESSNNNLQQSA  204 (391)
Q Consensus       185 ~C~~--C~----~~F~~~~~L~~H~~  204 (391)
                      -|.+  |-    ..|.....|..|+.
T Consensus       277 ~ct~qtc~~~k~~vf~~~~el~~h~~  302 (493)
T COG5236         277 CCTFQTCRVGKCYVFPYHTELLEHLT  302 (493)
T ss_pred             EEEEEEEecCcEEEeccHHHHHHHHH
Confidence            6654  32    47888888999983

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=94.02  E-value=0.078  Score=59.30  Aligned_cols=144  Identities=14%  Similarity=0.161  Sum_probs=74.6

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh--cCCCceecC-CCCcccCh
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT--CGTKEYKCD-CGTIFSRR  120 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~--~gek~~~C~-C~k~F~~~  120 (391)
                      .+.|+|+.  |     ...|.....|..|+|..|-+-.-  .+|. .+.....+.+ ...  .+.++|.|. |...+...
T Consensus       463 ~kt~~cpk--c-----~~~yk~a~~L~vhmRskhp~~~~--~~c~-~gq~~~~~ar-g~~~~~~~~p~~C~~C~~stttn  531 (1406)
T KOG1146|consen  463 FKTLKCPK--C-----NWHYKLAQTLGVHMRSKHPESQS--AYCK-AGQNHPRLAR-GEVYRCPGKPYPCRACNYSTTTN  531 (1406)
T ss_pred             cccccCCc--c-----chhhhhHHHhhhcccccccccch--hHhH-hccccccccc-cccccCCCCcccceeeeeeeecc
Confidence            36677777  7     77777777777777764332111  2221 1111111111 011  355889999 99999999


Q ss_pred             hHHHHHHHHhhhhhhhhhhhhcCCCCCcCCchhhhhcccccCCC----CCCCCcccccccc--CCCCCCccCCccccccC
Q 016352          121 DSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHT----ENNNNPLAHHELM--PMPPKPFNTMAAASIFE  194 (391)
Q Consensus       121 ~~L~~H~~~h~~~~~~~~~~h~~~~p~f~~~~~L~~H~~~h~~e----~~~~~~L~~H~~~--htg~kp~~C~~C~~~F~  194 (391)
                      ..|..|+..+-.+.+.......           .-.+++++...    .+....+..-.-.  ...+-.+.|.+|++.-.
T Consensus       532 g~LsihlqS~~h~~~lee~~~~-----------~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetn  600 (1406)
T KOG1146|consen  532 GNLSIHLQSDLHRNELEEAEEN-----------AGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETN  600 (1406)
T ss_pred             hHHHHHHHHHhhHHHHHHHHhc-----------cccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhh
Confidence            9999999854222220000000           01111111111    1100111000000  11233589999999999


Q ss_pred             CchhHHhhhhccCCC
Q 016352          195 SSNNNLQQSAAASAS  209 (391)
Q Consensus       195 ~~~~L~~H~~~~~~s  209 (391)
                      -..+|..|+......
T Consensus       601 iarnlrihmtss~~s  615 (1406)
T KOG1146|consen  601 IARNLRIHMTASPSS  615 (1406)
T ss_pred             hhhccccccccCCCC
Confidence            999999999654443

>PRK04860 hypothetical protein; Provisional

Probab=93.82  E-value=0.032  Score=48.91  Aligned_cols=35  Identities=26%  Similarity=0.747  Sum_probs=19.0

Q ss_pred             CccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccC
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSR  119 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~  119 (391)
                      +|.|. |++   ....+.+|.++ .++++|.|. |+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            45555 554   44455555555 455556665 6555543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.61  E-value=0.041  Score=31.90  Aligned_cols=23  Identities=26%  Similarity=0.600  Sum_probs=18.7

Q ss_pred             eeccccccccCChhhHHHHHHhcC
Q 016352            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |+|+.|+.... +..|.+|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            79999999998 999999998864

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.60  E-value=0.018  Score=34.55  Aligned_cols=23  Identities=30%  Similarity=0.800  Sum_probs=20.8

Q ss_pred             eeccccccccCChhhHHHHHHhc
Q 016352            6 FVCEICNKGFQRDQNLQLHRRGH   28 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~H   28 (391)
                      |.|..|++.|.+...|..|++..
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999998653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=93.39  E-value=0.045  Score=47.96  Aligned_cols=40  Identities=20%  Similarity=0.606  Sum_probs=33.7

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChh
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS   95 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~   95 (391)
                      -+|.|.   |     ++   ....+.+|.++|+++++|+|..|++.|....
T Consensus       118 ~~Y~C~---C-----~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK---C-----QE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC---C-----CC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            579995   7     65   5667899999999999999999999987643

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.19  E-value=0.053  Score=31.66  Aligned_cols=19  Identities=37%  Similarity=0.718  Sum_probs=8.8

Q ss_pred             ecC-CCCcccChhHHHHHHH
Q 016352          110 KCD-CGTIFSRRDSFITHRA  128 (391)
Q Consensus       110 ~C~-C~k~F~~~~~L~~H~~  128 (391)
                      .|. |++.|.+...|+.|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            444 4444444444444443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.64  E-value=0.062  Score=32.21  Aligned_cols=22  Identities=27%  Similarity=0.249  Sum_probs=20.2

Q ss_pred             ccCCccccccCCchhHHhhhhc
Q 016352          184 FNTMAAASIFESSNNNLQQSAA  205 (391)
Q Consensus       184 ~~C~~C~~~F~~~~~L~~H~~~  205 (391)
                      |.|..|++.|.+...|..|+..
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999853

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=92.41  E-value=0.071  Score=51.37  Aligned_cols=126  Identities=15%  Similarity=0.297  Sum_probs=77.0

Q ss_pred             ceecc--ccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccC------CHHHHHHHHHHh
Q 016352            5 RFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALG------DLTGIKKHFSRK   76 (391)
Q Consensus         5 pf~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~------~~~~L~~H~~~H   76 (391)
                      .|.|+  .|.........|+.|.+..+               ..+.|.+  |.-+  .+.|.      ++..|..|...-
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H---------------~~~~C~~--C~~n--Kk~F~~E~~lF~~~~Lr~H~~~G  211 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQH---------------GFVLCSE--CIGN--KKDFWNEIRLFRSSTLRDHKNGG  211 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhc---------------CcEEhHh--hhcC--cccCccceeeeecccccccccCC
Confidence            36675  36666666788999987664               2345655  5322  22232      234556665543


Q ss_pred             cCCCCc----cCCcCccccCChhHHHHHHhhcCCCceecC-C----CCcccChhHHHHHHHHhhhhhhhhhhhhcCCCC-
Q 016352           77 HGEKKW----KCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-C----GTIFSRRDSFITHRAFCDALAEESQKANQGLNP-  146 (391)
Q Consensus        77 ~~ekp~----~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C----~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p-  146 (391)
                      ..+.-|    .|..|.+.|.....|.+|++.-.|+-|.|+ -    ..-|....+|..|.+          +.|-...- 
T Consensus       212 ~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~----------~~hy~ct~q  281 (493)
T COG5236         212 LEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFR----------NAHYCCTFQ  281 (493)
T ss_pred             ccccCcCCCchhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhh----------cCceEEEEE
Confidence            333233    488899999998999999888446656664 2    245777888888886          22321111 


Q ss_pred             --------CcCCchhhhhccc
Q 016352          147 --------QLGHVSEHISSMP  159 (391)
Q Consensus       147 --------~f~~~~~L~~H~~  159 (391)
                              .|....+|..|+.
T Consensus       282 tc~~~k~~vf~~~~el~~h~~  302 (493)
T COG5236         282 TCRVGKCYVFPYHTELLEHLT  302 (493)
T ss_pred             EEecCcEEEeccHHHHHHHHH
Confidence                    5677777777764

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.23  E-value=0.19  Score=34.87  Aligned_cols=32  Identities=19%  Similarity=0.506  Sum_probs=23.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp   81 (391)
                      .+.|..|++  |     +..+....+|.+|+..+|+.||
T Consensus        21 S~~PatCP~--C-----~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPI--C-----GAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TT--T-------EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCc--c-----hhhccchhhHHHHHHHHhcccC
Confidence            577999999  9     9999999999999999988775

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=91.50  E-value=0.18  Score=28.94  Aligned_cols=17  Identities=12%  Similarity=0.386  Sum_probs=8.7

Q ss_pred             CCccCCHHHHHHHHHHh
Q 016352           60 ARALGDLTGIKKHFSRK   76 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H   76 (391)
                      ++.|.....|..|++.|
T Consensus         7 ~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        7 GKVFKSKSALKEHMRTH   23 (26)
T ss_pred             cchhCCHHHHHHHHHHh
Confidence            55555555555555443

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=91.07  E-value=0.34  Score=51.34  Aligned_cols=88  Identities=15%  Similarity=0.237  Sum_probs=55.4

Q ss_pred             CHHHHHHHHHHhcCCCCccCCcC---------ccccCChhHHHHHHhh--cCCCc----eecC-CCCcccChhHHHHHHH
Q 016352           65 DLTGIKKHFSRKHGEKKWKCEKC---------SKKYAVQSDWKAHSKT--CGTKE----YKCD-CGTIFSRRDSFITHRA  128 (391)
Q Consensus        65 ~~~~L~~H~~~H~~ekp~~C~~C---------~k~F~~~~~L~~H~~~--~gek~----~~C~-C~k~F~~~~~L~~H~~  128 (391)
                      ....|+.|++..|.  .+.|..|         .....++..|..|+..  .+++-    -.|. |...|.....|.+|++
T Consensus       126 s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~  203 (669)
T KOG2231|consen  126 SVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLR  203 (669)
T ss_pred             HHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhc
Confidence            66789999865443  3555544         2334567788888876  32322    4699 9999999999999998


Q ss_pred             HhhhhhhhhhhhhcCCCC-----CcCCchhhhhcccc
Q 016352          129 FCDALAEESQKANQGLNP-----QLGHVSEHISSMPI  160 (391)
Q Consensus       129 ~h~~~~~~~~~~h~~~~p-----~f~~~~~L~~H~~~  160 (391)
                      ..      ++.+|-+.+.     -|..-..|..|.+.
T Consensus       204 ~~------h~~chfC~~~~~~neyy~~~~dLe~HfR~  234 (669)
T KOG2231|consen  204 FD------HEFCHFCDYKTGQNEYYNDYDDLEEHFRK  234 (669)
T ss_pred             cc------eeheeecCcccccchhcccchHHHHHhhh
Confidence            42      2233333211     45566666666553

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.91  E-value=0.18  Score=29.77  Aligned_cols=21  Identities=33%  Similarity=0.852  Sum_probs=13.2

Q ss_pred             eecC-CCCcccChhHHHHHHHHh
Q 016352          109 YKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus       109 ~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      ..|+ |++.| ..+.|..|+.+|
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~C   24 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKIC   24 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHhc
Confidence            3566 77777 566666676543

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=90.87  E-value=0.088  Score=47.21  Aligned_cols=78  Identities=22%  Similarity=0.517  Sum_probs=65.2

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-c----------CCCceec
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-C----------GTKEYKC  111 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~----------gek~~~C  111 (391)
                      .-+.+.|++.+|     .+.|........|..+-++.   .|..|.+.|.+..-|..|+.- |          |..-|.|
T Consensus        76 ~~~~~~cqvagc-----~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~C  147 (253)
T KOG4173|consen   76 RVPAFACQVAGC-----CQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQC  147 (253)
T ss_pred             ccccccccccch-----HHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHH
Confidence            345688999888     89998888888888665553   799999999999999999865 4          4556999


Q ss_pred             C---CCCcccChhHHHHHHH
Q 016352          112 D---CGTIFSRRDSFITHRA  128 (391)
Q Consensus       112 ~---C~k~F~~~~~L~~H~~  128 (391)
                      -   |+..|.+......|+.
T Consensus       148 lvEgCt~KFkT~r~RkdH~I  167 (253)
T KOG4173|consen  148 LVEGCTEKFKTSRDRKDHMI  167 (253)
T ss_pred             HHHhhhhhhhhhhhhhhHHH
Confidence            4   9999999999999996

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.83  E-value=0.17  Score=31.94  Aligned_cols=25  Identities=28%  Similarity=0.769  Sum_probs=21.9

Q ss_pred             CceeccccccccCChhhHHHHHHhc
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGH   28 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H   28 (391)
                      .+|.|++|++.|.....+..|++..
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHChH
Confidence            3689999999999999999998654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=90.74  E-value=0.082  Score=59.16  Aligned_cols=120  Identities=16%  Similarity=0.275  Sum_probs=88.0

Q ss_pred             CceeccccccccCChhhHHHHHHhcC-CC--cccc--------cc-cccccCCceeecCCCCCCCCCCCCccCCHHHHHH
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN-LP--WKLR--------QR-STTEIRKRVYVCPEPSCVHHNPARALGDLTGIKK   71 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~-~~--~~~~--------~~-~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~   71 (391)
                      |-|+|..|+..|+....|..|+|.-+ ..  ..|.        .+ ....-..++|.|..  |     ...+..+.+|..
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~--C-----~~stttng~Lsi  536 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRA--C-----NYSTTTNGNLSI  536 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCccccee--e-----eeeeecchHHHH
Confidence            56899999999999999999999733 10  0010        00 11112457899999  8     899999999999


Q ss_pred             HHHHh--cC-----------------------------------------CCCccCCcCccccCChhHHHHHHhh-cC-C
Q 016352           72 HFSRK--HG-----------------------------------------EKKWKCEKCSKKYAVQSDWKAHSKT-CG-T  106 (391)
Q Consensus        72 H~~~H--~~-----------------------------------------ekp~~C~~C~k~F~~~~~L~~H~~~-~g-e  106 (391)
                      |+..-  ..                                         +..|.|..|+.......+|..|+.. +. .
T Consensus       537 hlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s~  616 (1406)
T KOG1146|consen  537 HLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSSS  616 (1406)
T ss_pred             HHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCCC
Confidence            97642  10                                         1249999999999999999999988 43 3


Q ss_pred             CceecC-CCCcccChhHHHHHHHHh
Q 016352          107 KEYKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus       107 k~~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      .|..|. |.-.+.....+..+.+.+
T Consensus       617 ~p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  617 PPSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             ChHHHhhhcchhhccccccCcCCCC
Confidence            448888 888888888777777644

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=88.63  E-value=0.5  Score=27.21  Aligned_cols=17  Identities=24%  Similarity=0.538  Sum_probs=8.1

Q ss_pred             CCccCCHHHHHHHHHHhc
Q 016352           60 ARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~   77 (391)
                      ..... ...|.+|++.++
T Consensus         7 ~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    7 SYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             S-EES-HHHHHHHHHHHH
T ss_pred             CCcCC-HHHHHHHHHhhC
Confidence            44444 555555555543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=86.12  E-value=0.57  Score=27.60  Aligned_cols=21  Identities=29%  Similarity=0.680  Sum_probs=17.9

Q ss_pred             eeccccccccCChhhHHHHHHh
Q 016352            6 FVCEICNKGFQRDQNLQLHRRG   27 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~   27 (391)
                      .+|..|++.| ....|.+|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 67889999764

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=85.51  E-value=0.25  Score=48.97  Aligned_cols=116  Identities=20%  Similarity=0.257  Sum_probs=64.5

Q ss_pred             CC--Cceecc--ccccccCChhhHHHHHHhcCCC--ccccc-----------------c---cccccCCceeecCCCCCC
Q 016352            2 AT--NRFVCE--ICNKGFQRDQNLQLHRRGHNLP--WKLRQ-----------------R---STTEIRKRVYVCPEPSCV   55 (391)
Q Consensus         2 g~--kpf~C~--~C~k~F~~~~~L~~H~~~H~~~--~~~~~-----------------~---~~~~~~~~~~~C~~~~C~   55 (391)
                      ++  +|+.|.  .|++.|.+...+..|...|...  ..+..                 .   .........+.|....| 
T Consensus       316 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  394 (467)
T COG5048         316 GESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSC-  394 (467)
T ss_pred             cccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCCCCccchhhccCccCCccccccccch-
Confidence            55  899999  7999999999999999888711  11000                 0   00000122333433334 


Q ss_pred             CCCCCCccCCHHHHHHHHHHhcCCC--CccCCcCccccCChhHHHHHHhhcCCC-ceecCCCCcccChhH
Q 016352           56 HHNPARALGDLTGIKKHFSRKHGEK--KWKCEKCSKKYAVQSDWKAHSKTCGTK-EYKCDCGTIFSRRDS  122 (391)
Q Consensus        56 ~~~~~k~F~~~~~L~~H~~~H~~ek--p~~C~~C~k~F~~~~~L~~H~~~~gek-~~~C~C~k~F~~~~~  122 (391)
                          ...+.....+..|...|...+  .+.|..|.+.|.....+..|++.+... ++.|.+.+.|.....
T Consensus       395 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  460 (467)
T COG5048         395 ----IRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLD  460 (467)
T ss_pred             ----hhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCceeeccccccchhhh
Confidence                555555555566655555544  345566777777777777777663333 333334444444333

>smart00451 ZnF_U1 U1-like zinc finger

Probab=85.08  E-value=0.66  Score=29.19  Aligned_cols=22  Identities=23%  Similarity=0.502  Sum_probs=11.6

Q ss_pred             ccCCcCccccCChhHHHHHHhh
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |.|+.|++.|.....+..|+..
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             eEccccCCccCCHHHHHHHHCh
Confidence            4455555555555555555443

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=83.39  E-value=5.1  Score=38.98  Aligned_cols=54  Identities=24%  Similarity=0.497  Sum_probs=37.3

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC------C----------------CCccCCcCccccCChhHHHHHH
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG------E----------------KKWKCEKCSKKYAVQSDWKAHS  101 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~------e----------------kp~~C~~C~k~F~~~~~L~~H~  101 (391)
                      ....+|-.  |.    ......++....|+-.-|+      +                ..++|-.|.|.|..+..|+.||
T Consensus       142 ~fslqClF--Cn----~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHM  215 (423)
T KOG2482|consen  142 IFSLQCLF--CN----NEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHM  215 (423)
T ss_pred             eeeeEEEE--ec----chhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHH
Confidence            34567888  73    3444566777777643332      0                1378999999999999999999


Q ss_pred             hh
Q 016352          102 KT  103 (391)
Q Consensus       102 ~~  103 (391)
                      +.
T Consensus       216 rk  217 (423)
T KOG2482|consen  216 RK  217 (423)
T ss_pred             Hh
Confidence            86

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=82.70  E-value=0.38  Score=44.17  Aligned_cols=40  Identities=23%  Similarity=0.530  Sum_probs=20.6

Q ss_pred             CCcCccccCChhHHHHHHhhcCCCceecC-CCCcccChhHHHHH
Q 016352           84 CEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFITH  126 (391)
Q Consensus        84 C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~L~~H  126 (391)
                      |-+|++.|.....|.+|++.   |.|+|. |.|...+-..|..|
T Consensus        13 cwycnrefddekiliqhqka---khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA---KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh---ccceeeeehhhhccCCCceee
Confidence            55555555555555555543   235555 55555444444444

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=80.21  E-value=1.1  Score=41.63  Aligned_cols=32  Identities=31%  Similarity=0.690  Sum_probs=16.0

Q ss_pred             HHHHHHHhcCCCCccCCcCccccCChhHHHHHHh
Q 016352           69 IKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSK  102 (391)
Q Consensus        69 L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~  102 (391)
                      +.+|+.+.++ ..|.|-.|++.|.. ..++.|..
T Consensus        18 vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen   18 VEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             hHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            4445554444 34555555555554 44455544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	391
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		5e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 24/138 (17%)
Query: 6   FVCEICNKGFQRDQNLQLHRRGHN--LPWK-------------LRQRSTTEIRKRVYVCP 50
           + C  C K F   ++L  H+R H    P+K             LR    T   ++ Y CP
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP 109
Query: 51  EPSCVHHNPARALGDLTGIKKHFSRKHGXXXXXXXXXXXXYAVQSDWKAHSKT-CGTKEY 109
           E  C      ++   L  ++ H     G            ++ + +   H +T  G K Y
Sbjct: 110 E--C-----GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY 162
Query: 110 KC-DCGTIFSRRDSFITH 126
           KC +CG  FSRRD+   H
Sbjct: 163 KCPECGKSFSRRDALNVH 180

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	391
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-04

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 57.1 bits (139), Expect = 2e-10
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 26/128 (20%)

Query: 6   FVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARAL 63
           F+C    CNK + +  +LQ+H R H          T E   + Y C    C      R  
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKH----------TGE---KPYQCDFKDC-----ERRF 48

Query: 64  GDLTGIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC---DCGTIFS 118
                +K+H  R+H G K ++C+ C +K++     K H++T  G K + C    C   F+
Sbjct: 49  SRSDQLKRH-QRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFA 107

Query: 119 RRDSFITH 126
           R D  + H
Sbjct: 108 RSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 11/86 (12%)

Query: 47  YVCPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKCEK--CSKKYAVQSDWKAHSKT 103
           ++C  P C      +    L+ ++ H SRKH GEK ++C+   C ++++     K H + 
Sbjct: 7   FMCAYPGC-----NKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60

Query: 104 -CGTKEYKCD-CGTIFSRRDSFITHR 127
             G K ++C  C   FSR D   TH 
Sbjct: 61  HTGVKPFQCKTCQRKFSRSDHLKTHT 86

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 32/131 (24%), Positives = 42/131 (32%), Gaps = 28/131 (21%)

Query: 6   FVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARAL 63
           F C+   C KGF    +L  H   H          T E   + + C    C         
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTH----------TGE---KNFTCDSDGC-----DLRF 84

Query: 64  GDLTGIKKHFSRKHGEKKW--KC--EKCSKKYAVQSDWKAHSKT-CGTKEYKC---DCGT 115
                +KKHF+R H  K     C  E C K +   +  K H  +      Y+C    C  
Sbjct: 85  TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDK 144

Query: 116 IFSRRDSFITH 126
            FS       H
Sbjct: 145 RFSLPSRLKRH 155

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.8 bits (117), Expect = 8e-08
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 11/97 (11%)

Query: 36  QRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKC--EKCSKKYA 92
                  ++R++ C  P C      +     + +K H  R H GEK +KC  E C  ++A
Sbjct: 5   SSGPDLEKRRIHYCDYPGC-----TKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFA 58

Query: 93  VQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHR 127
              +   H +   G K ++C  C   FSR D    H 
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 22/101 (21%)

Query: 6   FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARAL 63
             C+   C K + +  +L+ H R H          T E   + Y C    C         
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTH----------TGE---KPYKCTWEGC-----DWRF 57

Query: 64  GDLTGIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKT 103
                + +H+ RKH G K ++C  C++ ++       H K 
Sbjct: 58  ARSDELTRHY-RKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 20/126 (15%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLT 67
            + C++ F   + L  H           +    E  ++ +VC           R      
Sbjct: 6   WDGCSQEFDSQEQLVHHIN--------SEHIHGE--RKEFVCHW--GGCSRELRPFKAQY 53

Query: 68  GIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWKAHSKT-CGTKEYKC---DCGTIFSRR 120
            +  H  R+H GEK  KC  E C K Y+   + K H ++  G K Y C    C   FS  
Sbjct: 54  MLVVHM-RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNA 112

Query: 121 DSFITH 126
                H
Sbjct: 113 SDRAKH 118

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 23/103 (22%)

Query: 6   FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARAL 63
             C    C K + R +NL+ H R H          T E   + Y+C    C     ++A 
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSH----------TGE---KPYMCEHEGC-----SKAF 109

Query: 64  GDLTGIKKHFSRKH-GEKKWKCEK--CSKKYAVQSDWKAHSKT 103
            + +   KH +R H  EK + C+   C+K+Y   S  + H KT
Sbjct: 110 SNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 10/58 (17%)

Query: 79  EKKWKCEKCSKKYAVQSDWKAHSKTC----GTKEYKCD-CGTI-----FSRRDSFITH 126
           E   + + CS+++  Q     H  +       KE+ C   G       F  +   + H
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 10/89 (11%)

Query: 42  IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHS 101
           +  R   CP   C      +   D + ++KH    HG +   C +C K +   S  K H 
Sbjct: 1   MEPRTIACPHKGC-----TKMFRDNSAMRKH-LHTHGPRVHVCAECGKAFVESSKLKRHQ 54

Query: 102 KT-CGTKEYKC---DCGTIFSRRDSFITH 126
               G K ++C    CG  FS   +  TH
Sbjct: 55  LVHTGEKPFQCTFEGCGKRFSLDFNLRTH 83

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 29/126 (23%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLT 67
            + C K F+ +  ++ H   H                RV+VC E  C      +A  + +
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTHG--------------PRVHVCAE--C-----GKAFVESS 48

Query: 68  GIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWKAHSKT-CGTKEYKC---DCGTIFSRR 120
            +K+H    H GEK ++C  E C K++++  + + H +   G + Y C    C   F++ 
Sbjct: 49  KLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQS 107

Query: 121 DSFITH 126
            +  +H
Sbjct: 108 TNLKSH 113

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.3 bits (111), Expect = 5e-07
 Identities = 23/124 (18%), Positives = 32/124 (25%), Gaps = 49/124 (39%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGD 65
           F C IC + F R  +L  H R H                                     
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH------------------------------------- 26

Query: 66  LTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFI 124
            TG          EK + C+ C +K+A   + K H           D    + S+     
Sbjct: 27  -TG----------EKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLE 75

Query: 125 THRA 128
              A
Sbjct: 76  NEVA 79

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 3/57 (5%)

Query: 75  RKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRA 128
                    KC +CS   + ++  + H +  C  + +KC+ C     +  +   H  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 75  RKH-GEKKWKCEKCSKKYAVQSDWKAHSKTC---GTKEYKC-DCGTIFSRRDSFITHR 127
               GE  ++C+ CS+ Y   S++  H  T      K Y C  C   F+R+D+   H 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.5 bits (109), Expect = 9e-07
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 47  YVCPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-C 104
           Y CP  SC      R       + +H  R H G+K ++C  C + ++       H +T  
Sbjct: 5   YACPVESC-----DRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

Query: 105 GTKEYKCD-CGTIFSRRDSFITHR 127
           G K + CD CG  F+R D    H 
Sbjct: 59  GEKPFACDICGRKFARSDERKRHT 82

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 70  KKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKT---CGTKEYKCD-CGTIFSRRDSFI 124
                R H GEK ++C  C  ++      K H          ++ C  C T+ +R+    
Sbjct: 4   GSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 125 TH 126
            H
Sbjct: 63  VH 64

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.9 bits (110), Expect = 4e-06
 Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 42/134 (31%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGD 65
           + C  C K F   ++L  H+R H          T E   + Y CPE  C           
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTH----------TGE---KPYKCPE--C----------- 83

Query: 66  LTGIKKHFSRK-----H-----GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DC 113
                K FS++     H     GEK + C +C K ++  +  +AH +T  G K YKC +C
Sbjct: 84  ----GKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPEC 139

Query: 114 GTIFSRRDSFITHR 127
           G  FSR D+  TH+
Sbjct: 140 GKSFSREDNLHTHQ 153

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.5 bits (109), Expect = 5e-06
 Identities = 43/133 (32%), Positives = 58/133 (43%), Gaps = 42/133 (31%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGD 65
           + C  C K F +  NL+ H+R H          T E   + Y CPE  C           
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTH----------TGE---KPYACPE--C----------- 111

Query: 66  LTGIKKHFSRK---------H-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DC 113
             G  K FS+          H GEK +KC +C K ++ + +   H +T  G K YKC +C
Sbjct: 112 --G--KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPEC 167

Query: 114 GTIFSRRDSFITH 126
           G  FSRRD+   H
Sbjct: 168 GKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.1 bits (108), Expect = 8e-06
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 24/124 (19%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGD 65
           + C  C K F R  +L  H+R H          T E   + Y CPE  C      ++  D
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTH----------TGE---KPYKCPE--C-----GKSFSD 61

Query: 66  LTGIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDS 122
              + +H  R H GEK +KC +C K ++ +++ +AH +T  G K Y C +CG  FS+   
Sbjct: 62  KKDLTRH-QRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAH 120

Query: 123 FITH 126
              H
Sbjct: 121 LRAH 124

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.8 bits (101), Expect = 7e-06
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 78  GEKKWKCEKCSKKYAVQSDWKAHSKT----CGTKEYKCD-CGTIFSRRDSFITHR 127
           G    +CE C      ++    H +          + C+ CG  F + DS   HR
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 39.7 bits (93), Expect = 8e-05
 Identities = 14/108 (12%), Positives = 23/108 (21%), Gaps = 45/108 (41%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGD 65
             CEIC    ++  +L  H+R H                                     
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKH------------------------------------- 30

Query: 66  LTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCDC 113
                   +      ++ CE C K++       AH             
Sbjct: 31  --------AETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ 70

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 28/135 (20%), Positives = 41/135 (30%), Gaps = 34/135 (25%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGH----------NLPWKL--------RQRSTTEIRKRV- 46
              + C++ F     L  H                 W+         + +       RV 
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 47  -----YVCPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWK 98
                + CP P C      +       +K H  R H GEK +KC  E C +++A  SD K
Sbjct: 86  TGEKPFPCPFPGC-----GKIFARSENLKIH-KRTHTGEKPFKCEFEGCDRRFANSSDRK 139

Query: 99  AHSKT-CGTKEYKCD 112
            H       K     
Sbjct: 140 KHMHVHTSDKSGPSS 154

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.4 bits (101), Expect = 8e-06
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 75  RKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDSFITHR 127
                +K +KC++C   +  + +  +H     G K Y+C  CG  F+R  +  TH 
Sbjct: 10  HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 43.6 bits (104), Expect = 9e-06
 Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 45/136 (33%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGD 65
             C  C+K F     L++H R H          T E   + + CP+  C         G 
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKH----------TGE---KPFECPK--C---------G- 42

Query: 66  LTGIKKHFSRK-----H--------GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC 111
                K + RK     H         E+ + C  C + +  + + + H  +  G   YKC
Sbjct: 43  -----KCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKC 97

Query: 112 -DCGTIFSRRDSFITH 126
             C   F ++    +H
Sbjct: 98  SSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 78  GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDSFITH 126
           G    +C  C KK+  +   K H++   G K ++C  CG  + R+++ + H
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 20/96 (20%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLT 67
            E C K F++   L++H+  H          T +     Y CP   C      +     +
Sbjct: 6   FENCGKAFKKHNQLKVHQFSH----------TQQ---LPYECPHEGC-----DKRFSLPS 47

Query: 68  GIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSK 102
            +K+H  + H G    K + CS      + +  H  
Sbjct: 48  RLKRHE-KVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 40.3 bits (95), Expect = 7e-05
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 11/87 (12%)

Query: 46  VYVCPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWKAHSK 102
           +YVC   +C      +A      +K H    H  +  ++C  E C K++++ S  K H K
Sbjct: 1   MYVCHFENC-----GKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK 54

Query: 103 T-CGTKEYKCD-CGTIFSRRDSFITHR 127
              G    K D C  +      ++ H 
Sbjct: 55  VHAGYPCKKDDSCSFVGKTWTLYLKHV 81

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.8 bits (102), Expect = 1e-05
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 78  GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDSFITHR 127
                KCE C K ++ +   K H +   G K YKC  C    +   S   H 
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL 56

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.0 bits (100), Expect = 2e-05
 Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 12/69 (17%)

Query: 71  KHFSRK---------H-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFS 118
           K FSRK         H G K +KC+ C    A  S    H +     + +KC  C     
Sbjct: 16  KCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASR 75

Query: 119 RRDSFITHR 127
                  H 
Sbjct: 76  NSSQLTVHL 84

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 75  RKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDSFITH 126
            +    +++KC++C K ++  SD   H +T  G K YKC +CG  F +R   I H
Sbjct: 11  WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 20/97 (20%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLT 67
              C K + +  +L+ H R H          T E   + Y C    C             
Sbjct: 10  YAGCGKTYTKSSHLKAHLRTH----------TGE---KPYHCDWDGC-----GWKFARSD 51

Query: 68  GIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKT 103
            + +H+ RKH G + ++C+KC + ++       H K 
Sbjct: 52  ELTRHY-RKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 75  RKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD---CGTIFSRRDSFITHR 127
           ++          C K Y   S  KAH +T  G K Y CD   CG  F+R D    H 
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 37.1 bits (87), Expect = 8e-04
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 11/90 (12%)

Query: 43  RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH-GEKKWKC--EKCSKKYAVQSDWKA 99
           R   + C    C      +     + +K H  R H GEK + C  + C  K+A   +   
Sbjct: 2   RTATHTCDYAGC-----GKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTR 55

Query: 100 HSKT-CGTKEYKCD-CGTIFSRRDSFITHR 127
           H +   G + ++C  C   FSR D    H 
Sbjct: 56  HYRKHTGHRPFQCQKCDRAFSRSDHLALHM 85

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.5 bits (96), Expect = 4e-05
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)

Query: 68  GIKKHFSRKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDSFI 124
           G     S  H GEK + C +C K ++  S    H +   G K YKC +CG  FS+    I
Sbjct: 1   GSSGS-SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59

Query: 125 THR 127
            H+
Sbjct: 60  NHQ 62

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 40.9 bits (97), Expect = 5e-05
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 12/69 (17%)

Query: 71  KHFSRK---------H-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFS 118
           +HF++          H  E+ + C+ C K +  Q   + H       K +KC +CG  F 
Sbjct: 25  RHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFC 84

Query: 119 RRDSFITHR 127
           +  +   H+
Sbjct: 85  QSRTLAVHK 93

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 40.5 bits (96), Expect = 8e-05
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 75  RKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDSFITHR 127
                +K++ C+ C + +    +   H +T    + Y C  C   F R+D    HR
Sbjct: 10  LPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 40.1 bits (95), Expect = 6e-05
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 75  RKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDSFITH 126
             H   + + C+ C K++  +SD K H+    G K +KC  CG  FS+  + ITH
Sbjct: 22  LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH 76

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.8 bits (94), Expect = 9e-05
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 7/59 (11%)

Query: 75  RKH-GEKKWKCEKCSKKYAVQSDWKAHSKT-----CGTKEYKC-DCGTIFSRRDSFITH 126
           R H GEK + C  C K +  +     H K           + C  CG  F+RR++   H
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 23/88 (26%)

Query: 6  FVCEI--CNKGFQRDQNLQLHRR-GHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARA 62
            C+   C + F   Q L  H++  H            +   + + CPEP+C      ++
Sbjct: 8  MPCDFPGCGRIFSNRQYLNHHKKYQH----------IHQ---KSFSCPEPAC-----GKS 49

Query: 63 LGDLTGIKKHFSRKH-GEKKWKCEKCSK 89
                +K+H  + H   + + CE    
Sbjct: 50 FNFKKHLKEH-MKLHSDTRDYICEFSGP 76

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 78  GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC-DCGTIFSRRDSFITH 126
           G     CE C K +        H  +  G K Y C  CG  F R+D    H
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH 54

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 25/125 (20%), Positives = 35/125 (28%), Gaps = 52/125 (41%)

Query: 6   FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGD 65
             CEIC K F+   +L  H+  H+                                    
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHS------------------------------------ 31

Query: 66  LTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT---CGTKEYKC-DCGTIFSRRD 121
                       GEK + C  C  ++  +     H ++      K Y C  CG  FSR D
Sbjct: 32  ------------GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPD 79

Query: 122 SFITH 126
               H
Sbjct: 80  HLNGH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 38.2 bits (90), Expect = 5e-04
 Identities = 24/126 (19%), Positives = 35/126 (27%), Gaps = 43/126 (34%)

Query: 8   CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLT 67
           C+ C K F        H   H                R Y C    C         G   
Sbjct: 13  CQ-CGKSFTHKSQRDRHMSMH----------LGL---RPYGCGV--C---------G--- 44

Query: 68  GIKKHFSRKH----------GEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKC-DCGTI 116
              K F  KH          G K ++C  C+K++  +  +  H  +  TK Y+       
Sbjct: 45  ---KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS-CTKSYEAAKAEQN 100

Query: 117 FSRRDS 122
            +    
Sbjct: 101 TTEASG 106

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	391
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.91
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.83
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.83
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.77
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.72
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.71
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.67
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.66
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.65
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.64
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.63
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.63
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.62
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.61
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.61
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.6
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.59
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.58
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.55
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.54
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.54
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.5
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.49
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.47
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.45
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.44
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.44
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.44
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.43
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.4
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.37
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.37
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.35
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.34
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.34
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.33
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.33
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.28
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.28
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.28
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.27
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.26
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.25
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.23
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.23
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.2
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.2
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.18
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.17
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.17
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.17
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.16
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.12
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.1
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.1
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.02
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.0
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.99
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.98
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.97
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.9
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.89
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.89
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.89
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.88
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.87
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.85
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.85
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.85
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.84
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.83
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.83
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.78
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.78
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.78
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.77
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.77
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.77
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.76
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.76
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.75
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.75
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.75
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.74
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.74
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.74
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.73
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.71
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.71
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.71
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.71
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.71
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.7
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.7
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.7
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.7
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.69
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.69
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.68
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.66
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.65
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.64
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.63
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.62
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.61
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.61
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.61
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.6
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.6
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.6
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.59
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.58
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.58
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.58
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.58
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.58
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.58
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.57
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.56
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.56
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.56
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.56
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.56
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.56
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.56
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.55
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.55
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.55
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.55
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.55
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.55
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.54
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.54
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.54
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.54
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.54
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.54
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.53
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.52
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.51
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.51
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.5
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.49
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.49
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.49
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.49
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.48
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.47
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.47
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.46
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.46
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.45
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.44
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.43
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.43
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.42
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.41
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.41
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.4
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.38
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.36
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.35
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.31
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.29
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.23
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.22
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.21
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.14
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.13
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.11
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.1
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.08
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.04
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.04
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.03
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.99
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.98
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.98
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.95
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.95
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.95
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.91
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.9
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.89
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.88
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.87
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.87
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.87
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.86
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.85
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.85
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.84
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.04
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.82
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.81
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.81
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.77
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.75
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.74
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.74
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.73
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.88
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.69
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.86
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.67
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.65
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.58
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.57
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.53
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.49
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.47
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.4
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.34
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.33
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.32
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.31
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.31
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.3
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.28
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.18
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.15
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.09
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.08
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.08
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.02
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.07
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	96.97
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.93
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.88
1paa_A	30	Yeast transcription factor ADR1; transcription reg	96.75
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.67
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.51
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.47
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.75
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.39
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.64
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.37
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.21
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.07
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	86.71
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	81.17
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	80.35

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.95  E-value=1.5e-28  Score=219.68  Aligned_cols=159  Identities=25%  Similarity=0.577  Sum_probs=128.3

Q ss_pred             CCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCC
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp   81 (391)
                      |++||.|++|++.|.....|..|++.|.             ++++|.|+.  |     ++.|.....|..|+++|+++++
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~   77 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQRTHT-------------GEKPYKCPE--C-----GKSFSDKKDLTRHQRTHTGEKP   77 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC----------------CCEECTT--T-----CCEESSHHHHHHHHHHHHCCCC
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHHHcC-------------CCCCccCCC--c-----CchhCCHHHHHHHHHhcCCCCC
Confidence            6889999999999999999999999997             788999999  9     9999999999999999999999


Q ss_pred             ccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCC--------CcCCc
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAFCDALAEESQKANQGLNP--------QLGHV  151 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p--------~f~~~  151 (391)
                      |.|++|++.|.....|..|+++ +++++|.|+ |++.|.+...|..|+++           |.++++        .|...
T Consensus        78 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-----------h~~~~~~~C~~C~~~f~~~  146 (190)
T 2i13_A           78 YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-----------HTGEKPYKCPECGKSFSRE  146 (190)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHH-----------HHCCCCEECTTTCCEESCH
T ss_pred             ccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHH-----------hCCCCCeECCCCCcccCCH
Confidence            9999999999999999999999 799999999 99999999999999974           555554        56766


Q ss_pred             hhhhhcccccCCCCCCCCccccccccCCCCCCccCCccccccCCchhHHhhhhccCC
Q 016352          152 SEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNNLQQSAAASA  208 (391)
Q Consensus       152 ~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~~C~~~F~~~~~L~~H~~~~~~  208 (391)
                      ..|..|+++                 |+++++|.|++|++.|.+...|.+|++....
T Consensus       147 ~~L~~H~~~-----------------H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  186 (190)
T 2i13_A          147 DNLHTHQRT-----------------HTGEKPYKCPECGKSFSRRDALNVHQRTHTG  186 (190)
T ss_dssp             HHHHHHHHH-----------------HHCCCCEECTTTCCEESSHHHHHHHHTTC--
T ss_pred             HHHHHHHHh-----------------cCCCCCeECCCCCCccCCHHHHHHHHHhcCC
Confidence            666666654                 5578999999999999999999999987654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.91  E-value=2e-24  Score=192.84  Aligned_cols=155  Identities=18%  Similarity=0.425  Sum_probs=134.6

Q ss_pred             CCCceec--cccccccCChhhHHHHHHhcCCCcccccccccccCCceeec--CCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352            2 ATNRFVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVC--PEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus         2 g~kpf~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C--~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      +.++|.|  ..|++.|.....|..|++.|+             ++++|.|  +.  |     ++.|.....|..|+++|+
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~-------------~~~~~~C~~~~--C-----~~~f~~~~~l~~H~~~h~   68 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHT-------------GEKPFPCKEEG--C-----EKGFTSLHHLTRHSLTHT   68 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHH-------------CCCSSCCSSTT--C-----CCCCSSHHHHHHHHTTTT
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcC-------------CCCCccCCCCC--C-----ChhhCCHHHHHHHHHHcc
Confidence            4789999  689999999999999999997             7899999  77  9     999999999999999999


Q ss_pred             CCCCccCC--cCccccCChhHHHHHHhh-c--CCCceec--C-CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCC---
Q 016352           78 GEKKWKCE--KCSKKYAVQSDWKAHSKT-C--GTKEYKC--D-CGTIFSRRDSFITHRAFCDALAEESQKANQGLNP---  146 (391)
Q Consensus        78 ~ekp~~C~--~C~k~F~~~~~L~~H~~~-~--gek~~~C--~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p---  146 (391)
                      ++++|.|+  .|++.|.....|..|++. |  ++++|.|  + |++.|.+...|..|+++           |.+++|   
T Consensus        69 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-----------H~~~~~~~C  137 (190)
T 1tf6_A           69 GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS-----------HTQQLPYEC  137 (190)
T ss_dssp             TCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGG-----------GSSSCSSBC
T ss_pred             CCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHH-----------hCCCCCccC
Confidence            99999999  899999999999999955 6  5789999  9 99999999999999974           444443   


Q ss_pred             -------CcCCchhhhhcccccCCCCCCCCccccccccCCCCCCccCCc---cccccCCchhHHhhhhccC
Q 016352          147 -------QLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMA---AASIFESSNNNLQQSAAAS  207 (391)
Q Consensus       147 -------~f~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~~---C~~~F~~~~~L~~H~~~~~  207 (391)
                             .|.....|..|++                 +|++   |+|..   |++.|.+...|.+|++..+
T Consensus       138 ~~~~C~k~F~~~~~L~~H~~-----------------~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          138 PHEGCDKRFSLPSRLKRHEK-----------------VHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             CSSSCCCBCSSHHHHHHHHT-----------------SSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             CCCCCCchhcCHHHHHHHHH-----------------HhCC---CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence                   5566666665555                 4555   88999   9999999999999997654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=3.1e-24  Score=184.89  Aligned_cols=143  Identities=22%  Similarity=0.419  Sum_probs=127.6

Q ss_pred             CCceeccccccccCChhhHHHHHH---hcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRR---GHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~---~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      |.+|+|+.|++.|.+...|..|++   .|.             ++++|.|+++.|  ...++.|.....|..|+++|+++
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~-------------~~~~~~C~~c~C--~~c~~~f~~~~~l~~H~~~h~~~   65 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHG-------------ERKEFVCHWGGC--SRELRPFKAQYMLVVHMRRHTGE   65 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSS-------------CSSCCCCCBTTC--TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCC-------------CCcceeCCCCCc--cchhhhhhhHHHHHHHHHhcCCC
Confidence            568999999999999999999998   454             778999987333  22259999999999999999999


Q ss_pred             CCccCCc--CccccCChhHHHHHHhh-cCCCceecC---CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCCCcCCchh
Q 016352           80 KKWKCEK--CSKKYAVQSDWKAHSKT-CGTKEYKCD---CGTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSE  153 (391)
Q Consensus        80 kp~~C~~--C~k~F~~~~~L~~H~~~-~gek~~~C~---C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p~f~~~~~  153 (391)
                      ++|.|++  |++.|.....|..|+++ +++++|.|+   |++.|.+...|..|++.                        
T Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~------------------------  121 (155)
T 2gli_A           66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR------------------------  121 (155)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH------------------------
T ss_pred             CCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH------------------------
Confidence            9999985  99999999999999999 789999997   99999999999999831                        


Q ss_pred             hhhcccccCCCCCCCCccccccccCCCCCCccCCc--cccccCCchhHHhhhhccC
Q 016352          154 HISSMPINNHTENNNNPLAHHELMPMPPKPFNTMA--AASIFESSNNNLQQSAAAS  207 (391)
Q Consensus       154 L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~~--C~~~F~~~~~L~~H~~~~~  207 (391)
                                             +|+++++|.|++  |++.|.+...|.+|++..+
T Consensus       122 -----------------------~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          122 -----------------------THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             -----------------------TTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             -----------------------hcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence                                   677899999999  9999999999999997654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.90  E-value=5.6e-24  Score=189.90  Aligned_cols=134  Identities=28%  Similarity=0.657  Sum_probs=119.1

Q ss_pred             CCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCC
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp   81 (391)
                      ++++|.|.+|++.|.....|..|++.|.             ++++|.|+.  |     ++.|.....|..|++.|+++++
T Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~  105 (190)
T 2i13_A           46 GEKPYKCPECGKSFSDKKDLTRHQRTHT-------------GEKPYKCPE--C-----GKSFSQRANLRAHQRTHTGEKP  105 (190)
T ss_dssp             --CCEECTTTCCEESSHHHHHHHHHHHH-------------CCCCEECTT--T-----CCEESCHHHHHHHHHHHHTCCC
T ss_pred             CCCCccCCCcCchhCCHHHHHHHHHhcC-------------CCCCccCcc--c-----CCccCCHHHHHHHHHhcCCCCC
Confidence            6789999999999999999999999997             789999999  9     9999999999999999999999


Q ss_pred             ccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCC--------CcCCc
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAFCDALAEESQKANQGLNP--------QLGHV  151 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p--------~f~~~  151 (391)
                      |.|++|++.|.....|..|+++ +++++|.|+ |++.|.+...|..|++           +|.++++        .|...
T Consensus       106 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-----------~H~~~~~~~C~~C~~~f~~~  174 (190)
T 2i13_A          106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR-----------THTGEKPYKCPECGKSFSRR  174 (190)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-----------HHHCCCCEECTTTCCEESSH
T ss_pred             CcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHH-----------hcCCCCCeECCCCCCccCCH
Confidence            9999999999999999999999 799999999 9999999999999997           4555555        78888


Q ss_pred             hhhhhcccccCCCCC
Q 016352          152 SEHISSMPINNHTEN  166 (391)
Q Consensus       152 ~~L~~H~~~h~~e~~  166 (391)
                      ..|..|+++|++++|
T Consensus       175 ~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          175 DALNVHQRTHTGKKT  189 (190)
T ss_dssp             HHHHHHHTTC-----
T ss_pred             HHHHHHHHhcCCCCC
Confidence            888888888776653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=3e-22  Score=164.55  Aligned_cols=111  Identities=30%  Similarity=0.709  Sum_probs=104.5

Q ss_pred             CCCCceeccc--cccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC
Q 016352            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus         1 ~g~kpf~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~   78 (391)
                      +|++||.|.+  |++.|.....|..|++.|.             ++++|.|++..|     ++.|.....|..|+++|++
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~   63 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHT-------------GEKPYQCDFKDC-----ERRFSRSDQLKRHQRRHTG   63 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHH-------------TTCCEECCSTTC-----CCEESSHHHHHHHHHHHHC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhC-------------CCCCccCCCCCC-----cCccCCHHHHHHHHHHcCC
Confidence            5789999997  9999999999999999997             788999992229     9999999999999999999


Q ss_pred             CCCccCCcCccccCChhHHHHHHhh-cCCCceec--C-CCCcccChhHHHHHHHH
Q 016352           79 EKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC--D-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus        79 ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C--~-C~k~F~~~~~L~~H~~~  129 (391)
                      +++|.|++|++.|.....|..|+++ +++++|.|  + |++.|.+...|..|+++
T Consensus        64 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           64 VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             CCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence            9999999999999999999999999 79999999  8 99999999999999974

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=6.3e-22  Score=163.59  Aligned_cols=108  Identities=22%  Similarity=0.581  Sum_probs=103.3

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHH---hc
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSR---KH   77 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~---H~   77 (391)
                      +|+++|+|.+|++.|.....|..|++.|.             ++++|.|++  |     ++.|.....|..|++.   +.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~~~~~~   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHT-------------GEKPFECPK--C-----GKCYFRKENLLEHEARNCMNR   62 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHS-------------SCCSCBCTT--T-----CCBCSSHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCC-------------CCCCeECCC--C-----CchhcCHHHHHHHHhhhhcCC
Confidence            58899999999999999999999999998             789999999  9     9999999999999996   57


Q ss_pred             CCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHH
Q 016352           78 GEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRA  128 (391)
Q Consensus        78 ~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~  128 (391)
                      ++++|.|++|++.|.....|..|+++ +++++|.|+ |++.|.+...|..|++
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            88999999999999999999999999 799999999 9999999999999997

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=5e-22  Score=168.26  Aligned_cols=102  Identities=21%  Similarity=0.431  Sum_probs=95.2

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      +|++||+|++|++.|.....|..|+++|+             ++++|+|++  |     ++.|.....|..|+++|++++
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k   77 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHS-------------WEKKYPCRY--C-----EKVFPLAEYRTKHEIHHTGER   77 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHH-------------CCSCEECSS--S-----SCEESSHHHHHHHHHHHHTCC
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcC-------------CCCCeeCCc--c-----CeecccccchhhhccccCCCc
Confidence            48999999999999999999999999998             889999999  9     999999999999999999999


Q ss_pred             CccCCcCccccCChhHHHHHHhh-cCC------CceecC-CCCcccChhH
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT-CGT------KEYKCD-CGTIFSRRDS  122 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~-~ge------k~~~C~-C~k~F~~~~~  122 (391)
                      ||.|++|++.|..+..|..|+++ |++      ++|+|. |++.|.....
T Consensus        78 ~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~~  127 (133)
T 2lt7_A           78 RYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYA  127 (133)
T ss_dssp             CEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCCH
T ss_pred             cccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhccc
Confidence            99999999999999999999999 765      458999 9999977644

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.84  E-value=6.5e-21  Score=169.92  Aligned_cols=137  Identities=20%  Similarity=0.378  Sum_probs=118.5

Q ss_pred             CCCceec--cccccccCChhhHHHHHHhcCCCcccccccccccCCceeecC--CCCCCCCCCCCccCCHHHHHHHH-HHh
Q 016352            2 ATNRFVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCP--EPSCVHHNPARALGDLTGIKKHF-SRK   76 (391)
Q Consensus         2 g~kpf~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~--~~~C~~~~~~k~F~~~~~L~~H~-~~H   76 (391)
                      +++||.|  +.|++.|.....|..|++.|.             ++++|.|+  .  |     ++.|.+...|..|+ +.|
T Consensus        39 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~--C-----~~~f~~~~~l~~H~~~~h   98 (190)
T 1tf6_A           39 GEKPFPCKEEGCEKGFTSLHHLTRHSLTHT-------------GEKNFTCDSDG--C-----DLRFTTKANMKKHFNRFH   98 (190)
T ss_dssp             CCCSSCCSSTTCCCCCSSHHHHHHHHTTTT-------------TCCCEECCSSS--C-----CCEESCHHHHHHHHHTTS
T ss_pred             CCCCccCCCCCCChhhCCHHHHHHHHHHcc-------------CCCceeCCCCC--C-----CCccCCHHHHHHHHHHhc
Confidence            6889999  899999999999999999998             78999999  7  9     99999999999999 566


Q ss_pred             -cCCCCccC--CcCccccCChhHHHHHHhh-cCCCceec--C-CCCcccChhHHHHHHHHhhhhhhhhhhhhc---CCCC
Q 016352           77 -HGEKKWKC--EKCSKKYAVQSDWKAHSKT-CGTKEYKC--D-CGTIFSRRDSFITHRAFCDALAEESQKANQ---GLNP  146 (391)
Q Consensus        77 -~~ekp~~C--~~C~k~F~~~~~L~~H~~~-~gek~~~C--~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~---~~~p  146 (391)
                       .++++|.|  +.|++.|.....|..|+++ +++++|.|  + |++.|.+...|..|+++|.+     ++...   ..+ 
T Consensus        99 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-----~~C~~~~~C~~-  172 (190)
T 1tf6_A           99 NIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSF-  172 (190)
T ss_dssp             STTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS-----CCCCSTTTCCC-
T ss_pred             CCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC-----CcCCCCCcCCC-
Confidence             46889999  8999999999999999999 78999999  5 99999999999999986543     12222   111 


Q ss_pred             CcCCchhhhhcccccCCC
Q 016352          147 QLGHVSEHISSMPINNHT  164 (391)
Q Consensus       147 ~f~~~~~L~~H~~~h~~e  164 (391)
                      .|.....|..|+++|+++
T Consensus       173 ~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          173 VGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CCSCHHHHHHHHTTCC--
T ss_pred             ccccHHHHHHHHHhhcCC
Confidence            788999999999988764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.83  E-value=5.7e-21  Score=164.61  Aligned_cols=115  Identities=23%  Similarity=0.354  Sum_probs=98.5

Q ss_pred             CCCceeccccccccCChhhHHHHHHh-cCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRG-HNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      +..+|.|.+|++.|.+...|..|++. |.....     ........|.|+.  |     ++.|.....|..|+++|++++
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~-----~~~~~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~   89 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE-----QNNHVCYWEECPR--E-----GKSFKAKYKLVNHIRVHTGEK   89 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTT-----CSSCCCCBTTCTT--S-----SCCCSSHHHHHHHTHHHHCCC
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcc-----cCCccccccCCCC--c-----ccccCCHHHHHHHHHhcCCCC
Confidence            45789999999999999999999998 541100     0000112389999  9     999999999999999999999


Q ss_pred             CccCCc--CccccCChhHHHHHHhh-cCCCceecC---CCCcccChhHHHHHHH
Q 016352           81 KWKCEK--CSKKYAVQSDWKAHSKT-CGTKEYKCD---CGTIFSRRDSFITHRA  128 (391)
Q Consensus        81 p~~C~~--C~k~F~~~~~L~~H~~~-~gek~~~C~---C~k~F~~~~~L~~H~~  128 (391)
                      +|.|.+  |++.|.....|..|+++ +++++|.|.   |++.|.+...|..|++
T Consensus        90 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A           90 PFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             SEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             cccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            999998  99999999999999999 789999997   9999999999998886

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1e-20  Score=156.20  Aligned_cols=111  Identities=20%  Similarity=0.386  Sum_probs=103.1

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh----cCCCceecC-CCCcc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT----CGTKEYKCD-CGTIF  117 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~----~gek~~~C~-C~k~F  117 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|.|++|++.|.....|..|++.    .++++|.|+ |++.|
T Consensus         4 ~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f   76 (124)
T 2dlq_A            4 GSSGVECPT--C-----HKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF   76 (124)
T ss_dssp             CCSSCCCTT--T-----CCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEE
T ss_pred             CCCCCCCCC--C-----CCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCcc
Confidence            678999999  9     99999999999999999999999999999999999999999985    478999999 99999


Q ss_pred             cChhHHHHHHHHhhhhhhhhhhhhcCCCCCcCCchhhhhcccccCCCCCCCCccccccccCCCCCCccCCccccccCCch
Q 016352          118 SRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSN  197 (391)
Q Consensus       118 ~~~~~L~~H~~~h~~~~~~~~~~h~~~~p~f~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~~C~~~F~~~~  197 (391)
                      .+...|..|++                                                +|++++||.|++|++.|.+..
T Consensus        77 ~~~~~l~~H~~------------------------------------------------~h~~~~~~~C~~C~~~f~~~~  108 (124)
T 2dlq_A           77 RRRMELRLHMV------------------------------------------------SHTGEMPYKCSSCSQQFMQKK  108 (124)
T ss_dssp             SSHHHHHHHHH------------------------------------------------HHSSSCSEECSSSCCEESSHH
T ss_pred             CCHHHHHHHHH------------------------------------------------HcCCCCCccCCCccchhCCHH
Confidence            99999999997                                                456889999999999999999


Q ss_pred             hHHhhhhccCC
Q 016352          198 NNLQQSAAASA  208 (391)
Q Consensus       198 ~L~~H~~~~~~  208 (391)
                      .|.+|++..+.
T Consensus       109 ~l~~H~~~~H~  119 (124)
T 2dlq_A          109 DLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHHHHTSS
T ss_pred             HHHHHHHHHCC
Confidence            99999975443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.83  E-value=1.3e-20  Score=156.00  Aligned_cols=109  Identities=28%  Similarity=0.632  Sum_probs=100.0

Q ss_pred             CCCCceecc--ccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC
Q 016352            1 MATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus         1 ~g~kpf~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~   78 (391)
                      |++++|.|.  .|++.|.+...|..|++.|              ++++|.|+.  |     ++.|.....|..|+++|++
T Consensus         1 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~   59 (124)
T 1ubd_C            1 MEPRTIACPHKGCTKMFRDNSAMRKHLHTH--------------GPRVHVCAE--C-----GKAFVESSKLKRHQLVHTG   59 (124)
T ss_dssp             ----CEECCSTTCCCEESSHHHHHHHHGGG--------------SCCCEECTT--T-----CCEESSHHHHHHHGGGTSC
T ss_pred             CCCCcccCCCCCCcCccCCHHHHHHHHHHc--------------CCCCeECCC--C-----CchhCCHHHHHHHHHHcCC
Confidence            467899999  8999999999999999998              478999999  9     9999999999999999999


Q ss_pred             CCCccCCc--CccccCChhHHHHHHhh-cCCCceec--C-CCCcccChhHHHHHHHHh
Q 016352           79 EKKWKCEK--CSKKYAVQSDWKAHSKT-CGTKEYKC--D-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus        79 ekp~~C~~--C~k~F~~~~~L~~H~~~-~gek~~~C--~-C~k~F~~~~~L~~H~~~h  130 (391)
                      +++|.|.+  |++.|.....|..|+++ +++++|.|  + |++.|.+...|..|+++|
T Consensus        60 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  117 (124)
T 1ubd_C           60 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH  117 (124)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHH
Confidence            99999986  99999999999999999 79999999  6 999999999999999843

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.83  E-value=8.5e-21  Score=160.65  Aligned_cols=108  Identities=22%  Similarity=0.412  Sum_probs=95.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccCh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRR  120 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~  120 (391)
                      |+++|+|++  |     ++.|.....|..|+++|++++||+|++|++.|.....|..|+++ .+++||.|+ |++.|.+.
T Consensus        19 Gek~y~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           19 GRVYYICIV--C-----KRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             TEEEEEETT--T-----CCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             CCcCeECCC--C-----CCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            899999999  9     99999999999999999999999999999999999999999999 699999999 99999999


Q ss_pred             hHHHHHHHHhhhhhhhhhhhhcCCCCCcCCchhhhhcccccCCCCCCCCccccccccCCCCCCccCCccccccCCchhH
Q 016352          121 DSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMAAASIFESSNNN  199 (391)
Q Consensus       121 ~~L~~H~~~h~~~~~~~~~~h~~~~p~f~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~~C~~~F~~~~~L  199 (391)
                      ..|..|++.           |.+++                               -....++|+|.+|++.|......
T Consensus        92 ~~L~~H~~~-----------hh~~~-------------------------------p~~~~k~~~C~~C~k~~~~~~~h  128 (133)
T 2lt7_A           92 QFMSSHIKS-----------VHSQD-------------------------------PSGDSKLYRLHPCRSLQIRQYAY  128 (133)
T ss_dssp             HHHHHHHHH-----------HTCCC-------------------------------TTSSSCCEEECCCCSSCCCCCHH
T ss_pred             HHHHHHhHH-----------hcCCC-------------------------------CCCCCCCeecCCCCchhhhcccc
Confidence            999999974           22222                               11245789999999999876543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=1.7e-20  Score=154.01  Aligned_cols=110  Identities=26%  Similarity=0.616  Sum_probs=102.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC--cCccccCChhHHHHHHhh-cCCCceecC-CCCccc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE--KCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFS  118 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~  118 (391)
                      ++++|.|.++.|     ++.|.....|..|+++|+++++|.|+  .|++.|.....|..|+++ +++++|.|+ |++.|.
T Consensus         3 ~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   77 (119)
T 2jp9_A            3 EKRPFMCAYPGC-----NKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFS   77 (119)
T ss_dssp             SSCCBCCCSTTS-----CCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEES
T ss_pred             CCeeeeCCCCCC-----cchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhC
Confidence            678999986559     99999999999999999999999999  799999999999999999 799999999 999999


Q ss_pred             ChhHHHHHHHHhhhhhhhhhhhhcCCCCCcCCchhhhhcccccCCCCCCCCccccccccCCCCCCccC--CccccccCCc
Q 016352          119 RRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNT--MAAASIFESS  196 (391)
Q Consensus       119 ~~~~L~~H~~~h~~~~~~~~~~h~~~~p~f~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C--~~C~~~F~~~  196 (391)
                      +...|..|++                                                +|+++++|.|  +.|++.|.+.
T Consensus        78 ~~~~l~~H~~------------------------------------------------~h~~~~~~~C~~~~C~~~f~~~  109 (119)
T 2jp9_A           78 RSDHLKTHTR------------------------------------------------THTGEKPFSCRWPSCQKKFARS  109 (119)
T ss_dssp             CHHHHHHHHH------------------------------------------------HHHTCCCEECCSTTCCCEESSH
T ss_pred             CHHHHHHHHH------------------------------------------------HhcCCCCeeCCCCCCccccCCH
Confidence            9999999997                                                4557889999  8999999999


Q ss_pred             hhHHhhhhc
Q 016352          197 NNNLQQSAA  205 (391)
Q Consensus       197 ~~L~~H~~~  205 (391)
                      ..|.+|++.
T Consensus       110 ~~L~~H~~~  118 (119)
T 2jp9_A          110 DELVRHHNM  118 (119)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            999999864

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.77  E-value=4.9e-19  Score=146.54  Aligned_cols=112  Identities=24%  Similarity=0.504  Sum_probs=98.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC---CCCccc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD---CGTIFS  118 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~---C~k~F~  118 (391)
                      .+++|.|+...|     ++.|.+...|..|+++| ++++|.|++|++.|.....|..|+++ +++++|.|.   |++.|.
T Consensus         2 ~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   75 (124)
T 1ubd_C            2 EPRTIACPHKGC-----TKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS   75 (124)
T ss_dssp             ---CEECCSTTC-----CCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEES
T ss_pred             CCCcccCCCCCC-----cCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccC
Confidence            467899992229     99999999999999999 88999999999999999999999999 789999994   999999


Q ss_pred             ChhHHHHHHHHhhhhhhhhhhhhcCCCCCcCCchhhhhcccccCCCCCCCCccccccccCCCCCCccCC--ccccccCCc
Q 016352          119 RRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTM--AAASIFESS  196 (391)
Q Consensus       119 ~~~~L~~H~~~h~~~~~~~~~~h~~~~p~f~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~--~C~~~F~~~  196 (391)
                      +...|..|++                                                +|+++++|.|+  .|++.|.+.
T Consensus        76 ~~~~l~~H~~------------------------------------------------~h~~~~~~~C~~~~C~~~f~~~  107 (124)
T 1ubd_C           76 LDFNLRTHVR------------------------------------------------IHTGDRPYVCPFDGCNKKFAQS  107 (124)
T ss_dssp             CHHHHHHHHH------------------------------------------------HHHCCCCCCCCSTTCCCCCSST
T ss_pred             CHHHHHHHHH------------------------------------------------HhCCCCceECCCCCCCCccCCH
Confidence            9999999997                                                45578899996  599999999


Q ss_pred             hhHHhhhhccCC
Q 016352          197 NNNLQQSAAASA  208 (391)
Q Consensus       197 ~~L~~H~~~~~~  208 (391)
                      ..|.+|++....
T Consensus       108 ~~L~~H~~~H~~  119 (124)
T 1ubd_C          108 TNLKSHILTHAK  119 (124)
T ss_dssp             TTTHHHHHHHC-
T ss_pred             HHHHHHHHHHcc
Confidence            999999976554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=6.3e-19  Score=151.45  Aligned_cols=111  Identities=28%  Similarity=0.553  Sum_probs=100.8

Q ss_pred             CCCceecccc-----ccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHh
Q 016352            2 ATNRFVCEIC-----NKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRK   76 (391)
Q Consensus         2 g~kpf~C~~C-----~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H   76 (391)
                      ++++|.|.+|     ++.|.....|..|++.|+             ++++|.|++..|     ++.|.....|..|+++|
T Consensus        31 ~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h   92 (155)
T 2gli_A           31 ERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT-------------GEKPHKCTFEGC-----RKSYSRLENLKTHLRSH   92 (155)
T ss_dssp             CSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH-------------CCCCCCCCSTTC-----CCCCSSHHHHHHHHHHT
T ss_pred             CCcceeCCCCCccchhhhhhhHHHHHHHHHhcC-------------CCCCccCCCCCC-----CCcccCHHHHHHHHHHc
Confidence            6789998753     499999999999999997             789999984339     99999999999999999


Q ss_pred             cCCCCccCCc--CccccCChhHHHHHH-hh-cCCCceec--C-CCCcccChhHHHHHHHHh
Q 016352           77 HGEKKWKCEK--CSKKYAVQSDWKAHS-KT-CGTKEYKC--D-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus        77 ~~ekp~~C~~--C~k~F~~~~~L~~H~-~~-~gek~~~C--~-C~k~F~~~~~L~~H~~~h  130 (391)
                      +++++|.|++  |++.|.....|..|+ +. .++++|.|  + |++.|.+...|..|++.|
T Consensus        93 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h  153 (155)
T 2gli_A           93 TGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV  153 (155)
T ss_dssp             TTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhh
Confidence            9999999998  999999999999999 56 58899999  4 999999999999999853

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.72  E-value=1.7e-17  Score=142.71  Aligned_cols=112  Identities=19%  Similarity=0.403  Sum_probs=101.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHH-hcCCCC--------ccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSR-KHGEKK--------WKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~-H~~ekp--------~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      ....|.|..  |     ++.|.+...|..|++. |.++++        |.|.+|++.|.....|..|+++ +++++|.|.
T Consensus        22 ~~~~~~C~~--C-----~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   94 (155)
T 2rpc_A           22 AQLSRPKKS--C-----DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP   94 (155)
T ss_dssp             TCCSSSCCC--C-----CCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECS
T ss_pred             hhccccccc--C-----CcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCC
Confidence            567899999  9     9999999999999998 666654        8999999999999999999999 799999996


Q ss_pred             ---CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCCCcCCchhhhhcccccCCCCCCCCccccccccCCCCCCccCCc-
Q 016352          113 ---CGTIFSRRDSFITHRAFCDALAEESQKANQGLNPQLGHVSEHISSMPINNHTENNNNPLAHHELMPMPPKPFNTMA-  188 (391)
Q Consensus       113 ---C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p~f~~~~~L~~H~~~h~~e~~~~~~L~~H~~~htg~kp~~C~~-  188 (391)
                         |++.|.+...|..|++                                                +|+++++|.|.+ 
T Consensus        95 ~~~C~~~f~~~~~L~~H~~------------------------------------------------~h~~~~~~~C~~~  126 (155)
T 2rpc_A           95 FPGCGKIFARSENLKIHKR------------------------------------------------THTGEKPFKCEFE  126 (155)
T ss_dssp             CTTTCCEESCHHHHHHHHT------------------------------------------------TTCSSCSBCCSST
T ss_pred             cCCCCCccCCHHHHHHHHH------------------------------------------------hhCCCCCccCCCC
Confidence               9999999999999996                                                677899999997 


Q ss_pred             -cccccCCchhHHhhhhccCCC
Q 016352          189 -AASIFESSNNNLQQSAAASAS  209 (391)
Q Consensus       189 -C~~~F~~~~~L~~H~~~~~~s  209 (391)
                       |++.|.+...|.+|++.....
T Consensus       127 ~C~k~f~~~~~L~~H~~~H~~~  148 (155)
T 2rpc_A          127 GCDRRFANSSDRKKHMHVHTSD  148 (155)
T ss_dssp             TCCCCBSSHHHHHHSSTTTTSC
T ss_pred             CCCCccCCHHHHHHHHHHhcCC
Confidence             999999999999999876543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.72  E-value=1.2e-17  Score=134.36  Aligned_cols=88  Identities=26%  Similarity=0.594  Sum_probs=54.6

Q ss_pred             CCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCc
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~   82 (391)
                      +++|.|.+|++.|.....|..|++.|+             ++++|.|++  |     ++.|.....|..|+++|+++++|
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~   74 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHT-------------DERPYTCDI--C-----HKAFRRQDHLRDHRYIHSKEKPF   74 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHC-------------CSCCCBCSS--S-----CCBCSCHHHHHHHGGGSCCCCTT
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcC-------------CCCCcCCCC--c-----cchhCCHHHHHHHHHHhCCCCCe
Confidence            455666666666666666666666665             455666666  6     66666666666666666666666


Q ss_pred             cCCcCccccCChhHHHHHHhh-cCCCcee
Q 016352           83 KCEKCSKKYAVQSDWKAHSKT-CGTKEYK  110 (391)
Q Consensus        83 ~C~~C~k~F~~~~~L~~H~~~-~gek~~~  110 (391)
                      +|.+|++.|.....|..|+++ +++++|.
T Consensus        75 ~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           75 KCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             SCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             ECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            666666666666666666666 4555554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.7e-17  Score=130.84  Aligned_cols=87  Identities=28%  Similarity=0.581  Sum_probs=72.6

Q ss_pred             CCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCC
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp   81 (391)
                      +++||.|.+|++.|.....|..|++.|.             ++++|.|+.  |     ++.|.....|..|+++|+++++
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~   64 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHT-------------GVKPYKCKT--C-----DYAAADSSSLNKHLRIHSDERP   64 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCC-------------CCCSEECSS--S-----CCEESSHHHHHHHHHHSCCCCC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcC-------------CCCCEeCCC--C-----CCccCCHHHHHHHHHHhCCCCC
Confidence            6788888888888888888888888887             677888888  8     8888888888888888888888


Q ss_pred             ccCCcCccccCChhHHHHHHhh-cCCCc
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT-CGTKE  108 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~-~gek~  108 (391)
                      |+|++|++.|.....|..|+++ +++++
T Consensus        65 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           65 FKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             EECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            8888888888888888888888 56554

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=7.2e-17  Score=126.99  Aligned_cols=85  Identities=25%  Similarity=0.554  Sum_probs=70.0

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC-
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE-   79 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e-   79 (391)
                      +|+++|+|.+|++.|.....|..|++.|+             ++++|.|++  |     ++.|.....|..|++.|+++ 
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~   62 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSCPV--C-----GLRFKRKDRMSYHVRSHDGSV   62 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSC-------------SSCSEECSS--S-----CCEESCHHHHHHHHHHHCCCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcC-------------CCCCCcCCC--C-----CCccCCHHHHHHHHHHhcCCC
Confidence            46788888888888888888888888887             677888888  8     88888888888888888876 


Q ss_pred             -CCccCCcCccccCChhHHHHHHhh-cC
Q 016352           80 -KKWKCEKCSKKYAVQSDWKAHSKT-CG  105 (391)
Q Consensus        80 -kp~~C~~C~k~F~~~~~L~~H~~~-~g  105 (391)
                       ++|+|++|++.|..+..|..|++. |.
T Consensus        63 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           63 GKPYICQSCGKGFSRPDHLNGHIKQVHS   90 (95)
T ss_dssp             CSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred             CCceECCCccchhCCHHHHHHHHHHhcC
Confidence             788888888888888888888765 53

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=3.4e-17  Score=127.42  Aligned_cols=86  Identities=26%  Similarity=0.593  Sum_probs=62.3

Q ss_pred             CCCceecc--ccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352            2 ATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus         2 g~kpf~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      |++||.|.  .|++.|.....|..|++.|.             ++++|.|+.  |     ++.|.....|..|+++|+++
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~   60 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHT-------------GQKPFQCRI--C-----MRNFSRSDHLTTHIRTHTGE   60 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHH-------------CCCCEECTT--T-----CCEESCHHHHHHHHHHHHCC
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhC-------------CCCCccCCC--C-----CcccCCHHHHHHHHHHcCCC
Confidence            56777776  57777777777777777776             567777777  7     77777777777777777777


Q ss_pred             CCccCCcCccccCChhHHHHHHhh-cCCC
Q 016352           80 KKWKCEKCSKKYAVQSDWKAHSKT-CGTK  107 (391)
Q Consensus        80 kp~~C~~C~k~F~~~~~L~~H~~~-~gek  107 (391)
                      ++|.|++|++.|.....|..|+++ ++++
T Consensus        61 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           61 KPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            777777777777777777777777 4543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=5.6e-17  Score=130.93  Aligned_cols=89  Identities=19%  Similarity=0.268  Sum_probs=75.0

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      ++++||.|.+|++.|.....|..|++.|.               ++|.|++  |     ++.|.....|..|++ |++++
T Consensus        12 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H~---------------~~~~C~~--C-----~~~f~~~~~l~~H~~-H~~~~   68 (107)
T 1wjp_A           12 ENKEVYQCRLCNAKLSSLLEQGSHERLCR---------------NAAVCPY--C-----SLRFFSPELKQEHES-KCEYK   68 (107)
T ss_dssp             CCCCCCBCTTTCCBCSSHHHHHHHHHHHH---------------HSBCCTT--T-----CCCBSSHHHHHHHHH-HCSTG
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHCC---------------CCccCCC--C-----CCccCCHHHHHHHHH-cCCCC
Confidence            46788999999999998888999988873               5788888  8     888988888988985 88888


Q ss_pred             CccCCcCccccCChhHHHHHHh-h-cCCCceecC
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSK-T-CGTKEYKCD  112 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~-~-~gek~~~C~  112 (391)
                      +|+|++|++.|..+..|..|++ . .++++|.|.
T Consensus        69 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           69 KLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            8999999999999999999987 4 477888774

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.67  E-value=2e-16  Score=127.18  Aligned_cols=80  Identities=23%  Similarity=0.561  Sum_probs=77.0

Q ss_pred             cCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccC
Q 016352           42 IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSR  119 (391)
Q Consensus        42 ~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~  119 (391)
                      ..+++|.|++  |     ++.|.....|..|+++|+++++|.|++|++.|.....|..|+++ +++++|.|. |++.|.+
T Consensus        13 ~~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   85 (106)
T 2ee8_A           13 KTKKEFICKF--C-----GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ   85 (106)
T ss_dssp             CCCCCCBCSS--S-----CCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSS
T ss_pred             CCCcCeECCC--C-----CCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccC
Confidence            3678999999  9     99999999999999999999999999999999999999999999 789999999 9999999


Q ss_pred             hhHHHHHHH
Q 016352          120 RDSFITHRA  128 (391)
Q Consensus       120 ~~~L~~H~~  128 (391)
                      ...|..|++
T Consensus        86 ~~~L~~H~~   94 (106)
T 2ee8_A           86 SRTLAVHKT   94 (106)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999997

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.66  E-value=1.3e-16  Score=121.73  Aligned_cols=79  Identities=34%  Similarity=0.663  Sum_probs=49.2

Q ss_pred             ceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C   84 (391)
                      ||.|.+|++.|.....|..|++.|.             ++++|.|+.  |     ++.|.....|..|+++|+++++|.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C   60 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS-------------DTRPYPCQY--C-----GKRFHQKSDMKKHTFIHTGEKPHKC   60 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH-------------TCCCEECSS--S-----CCEESSHHHHHHHHHHHHTCCCEEC
T ss_pred             CccCCCCcccccCchhHHHHHHHcC-------------CCCCeeCCc--C-----ChhhCCHHHHHHHHHHhcCCCCCcC
Confidence            4666666666666666666666664             455666666  6     6666666666666666666666666


Q ss_pred             CcCccccCChhHHHHHHhh
Q 016352           85 EKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        85 ~~C~k~F~~~~~L~~H~~~  103 (391)
                      ++|++.|.....|..|+++
T Consensus        61 ~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A           61 QVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             TTTSCEESSHHHHHHHHHH
T ss_pred             CCcchhhCChHHHHHHHHh
Confidence            6666666666666666555

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=3e-16  Score=121.98  Aligned_cols=81  Identities=30%  Similarity=0.720  Sum_probs=75.5

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChh
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRD  121 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~  121 (391)
                      +++|.|++..|     ++.|.....|..|+++|+++++|.|+.|++.|.....|..|+++ +++++|.|. |++.|.+..
T Consensus         2 ~k~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   76 (90)
T 1a1h_A            2 ERPYACPVESC-----DRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD   76 (90)
T ss_dssp             -CCEECCSSSC-----CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH
T ss_pred             CCceECCCCCC-----CCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHH
Confidence            67999983229     99999999999999999999999999999999999999999999 799999999 999999999


Q ss_pred             HHHHHHHH
Q 016352          122 SFITHRAF  129 (391)
Q Consensus       122 ~L~~H~~~  129 (391)
                      .|..|+++
T Consensus        77 ~l~~H~~~   84 (90)
T 1a1h_A           77 ERKRHTKI   84 (90)
T ss_dssp             HHHHHHGG
T ss_pred             HHHHHHHH
Confidence            99999974

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.8e-16  Score=128.43  Aligned_cols=87  Identities=29%  Similarity=0.640  Sum_probs=76.1

Q ss_pred             cCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccC
Q 016352           42 IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSR  119 (391)
Q Consensus        42 ~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~  119 (391)
                      .++++|.| .  |     ++.|.....|..|++.|+++++|.|++|++.|.....|..|+++ +++++|.|. |++.|.+
T Consensus         6 ~~~k~~~C-~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   77 (110)
T 2csh_A            6 SGDKLYPC-Q--C-----GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMW   77 (110)
T ss_dssp             CCCCCEEC-T--T-----SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESC
T ss_pred             CCCCCEec-c--C-----CCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcC
Confidence            37888999 8  8     89999999999999999999999999999999999999999888 688899999 9999999


Q ss_pred             hhHHHHHHHHhhhhhhh
Q 016352          120 RDSFITHRAFCDALAEE  136 (391)
Q Consensus       120 ~~~L~~H~~~h~~~~~~  136 (391)
                      ...|..|++.|+.....
T Consensus        78 ~~~l~~H~~~~~~~~~~   94 (110)
T 2csh_A           78 RDSFHRHVTSCTKSYEA   94 (110)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccccccc
Confidence            99999999988765443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.64  E-value=4.3e-16  Score=118.83  Aligned_cols=78  Identities=27%  Similarity=0.610  Sum_probs=75.1

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHH
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSF  123 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L  123 (391)
                      +|.|++  |     ++.|.....|..|+++|+++++|.|+.|++.|..+..|..|+++ +++++|.|. |++.|.+...|
T Consensus         1 ~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCKI--C-----GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL   73 (82)
T ss_dssp             CEECSS--S-----CCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHH
T ss_pred             CccCCC--C-----cccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHH
Confidence            589999  9     99999999999999999999999999999999999999999999 799999999 99999999999


Q ss_pred             HHHHHHh
Q 016352          124 ITHRAFC  130 (391)
Q Consensus       124 ~~H~~~h  130 (391)
                      ..|+++|
T Consensus        74 ~~H~~~H   80 (82)
T 2kmk_A           74 ITHSRKH   80 (82)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            9999854

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=8.4e-16  Score=124.39  Aligned_cols=77  Identities=21%  Similarity=0.524  Sum_probs=69.2

Q ss_pred             HhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCC------
Q 016352           75 RKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAFCDALAEESQKANQGLNP------  146 (391)
Q Consensus        75 ~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p------  146 (391)
                      .|+++++|.| .|++.|.....|..|++. +++++|.|. |++.|.+...|..|++           +|.++++      
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-----------~h~~~~~~~C~~C   71 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-----------IHTGIKPYECNIC   71 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT-----------TTCCCCCEECSSS
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHH-----------HcCCCCCeeCCCC
Confidence            5789999999 999999999999999999 789999999 9999999999999997           5666555      


Q ss_pred             --CcCCchhhhhcccccCC
Q 016352          147 --QLGHVSEHISSMPINNH  163 (391)
Q Consensus       147 --~f~~~~~L~~H~~~h~~  163 (391)
                        .|.....|..|++.|..
T Consensus        72 ~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           72 AKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             CCEESCHHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHccc
Confidence              78999999999988754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=6.4e-16  Score=121.74  Aligned_cols=79  Identities=20%  Similarity=0.437  Sum_probs=76.8

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccCh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRR  120 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~  120 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|.|++|++.|.....|..|+++ +++++|.|. |++.|.+.
T Consensus         5 ~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   77 (96)
T 2dmd_A            5 SSGPHKCEV--C-----GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS   77 (96)
T ss_dssp             CCCCCCBTT--T-----TBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSH
T ss_pred             CCcCeECCC--C-----CCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence            688999999  9     99999999999999999999999999999999999999999999 789999999 99999999


Q ss_pred             hHHHHHHH
Q 016352          121 DSFITHRA  128 (391)
Q Consensus       121 ~~L~~H~~  128 (391)
                      ..|..|++
T Consensus        78 ~~l~~H~~   85 (96)
T 2dmd_A           78 SQLTVHLR   85 (96)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
Confidence            99999997

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=1.1e-15  Score=120.23  Aligned_cols=79  Identities=27%  Similarity=0.573  Sum_probs=76.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCC--CceecC-CCCccc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGT--KEYKCD-CGTIFS  118 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~ge--k~~~C~-C~k~F~  118 (391)
                      ++++|.|++  |     ++.|.....|..|+++|+++++|.|++|++.|.....|..|+++ +++  ++|.|. |++.|.
T Consensus         4 ~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~   76 (95)
T 2yt9_A            4 GSSGVACEI--C-----GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFS   76 (95)
T ss_dssp             CCSCEECSS--S-----CCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBS
T ss_pred             CCCCeECCC--C-----CCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhC
Confidence            688999999  9     99999999999999999999999999999999999999999999 665  899999 999999


Q ss_pred             ChhHHHHHHH
Q 016352          119 RRDSFITHRA  128 (391)
Q Consensus       119 ~~~~L~~H~~  128 (391)
                      +...|..|++
T Consensus        77 ~~~~L~~H~~   86 (95)
T 2yt9_A           77 RPDHLNGHIK   86 (95)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            9999999996

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=5.2e-16  Score=125.19  Aligned_cols=78  Identities=24%  Similarity=0.385  Sum_probs=73.1

Q ss_pred             cCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhhcCCCceecC-CCCcccCh
Q 016352           42 IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRR  120 (391)
Q Consensus        42 ~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~~~  120 (391)
                      .++++|+|++  |     ++.|.....|..|+++|.  ++|.|++|++.|.....|..|++-.++++|.|+ |++.|.+.
T Consensus        12 ~~~~~~~C~~--C-----~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A           12 ENKEVYQCRL--C-----NAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCBCTT--T-----CCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSH
T ss_pred             CCCcCeECCC--C-----CCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCH
Confidence            3789999999  9     999999999999999994  799999999999999999999953689999999 99999999


Q ss_pred             hHHHHHHH
Q 016352          121 DSFITHRA  128 (391)
Q Consensus       121 ~~L~~H~~  128 (391)
                      ..|..|++
T Consensus        83 ~~L~~H~~   90 (107)
T 1wjp_A           83 FSIWRHQV   90 (107)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999996

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=1.9e-16  Score=129.28  Aligned_cols=94  Identities=15%  Similarity=0.260  Sum_probs=77.3

Q ss_pred             hhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHH--hcCCCCcc-CCcCcccc--C
Q 016352           18 DQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSR--KHGEKKWK-CEKCSKKY--A   92 (391)
Q Consensus        18 ~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~--H~~ekp~~-C~~C~k~F--~   92 (391)
                      ...|..|++.|+             ++++|.|++  |     ++.|.....|..|+++  |.+++++. |++|++.|  .
T Consensus         4 ~~~l~~H~~~H~-------------~~~~~~C~~--C-----~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~   63 (115)
T 2dmi_A            4 GSSGKLYGSIFT-------------GASKFRCKD--C-----SAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKP   63 (115)
T ss_dssp             CCCCCCCCCCCC-------------CCCSEEBSS--S-----SCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSC
T ss_pred             chhhhhheeeeC-------------CCCCEECCc--c-----CchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccc
Confidence            345677777776             788899988  8     8899999999999888  77676654 88999888  8


Q ss_pred             ChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHHhh
Q 016352           93 VQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAFCD  131 (391)
Q Consensus        93 ~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~h~  131 (391)
                      .+..|..|+++ +++++|.|+ |++.|.+...|..|++.|+
T Consensus        64 ~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           64 RKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             CCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred             cHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhC
Confidence            88888888888 678889998 9999999999999987543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=7.6e-17  Score=131.67  Aligned_cols=88  Identities=15%  Similarity=0.217  Sum_probs=74.2

Q ss_pred             HHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh--c-CCCce-ecC-CCCcc--cChhHHHHHHHHhhhhhhhhhh
Q 016352           67 TGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT--C-GTKEY-KCD-CGTIF--SRRDSFITHRAFCDALAEESQK  139 (391)
Q Consensus        67 ~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~--~-gek~~-~C~-C~k~F--~~~~~L~~H~~~h~~~~~~~~~  139 (391)
                      ..|..|+++|+++++|+|++|++.|..+..|..|+++  + +++++ .|+ |++.|  .....|..|++           
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~-----------   73 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG-----------   73 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCC-----------
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhh-----------
Confidence            3467799999999999999999999999999999997  4 34554 599 99999  89999999986           


Q ss_pred             hhcCCCC--------CcCCchhhhhcccccCCCC
Q 016352          140 ANQGLNP--------QLGHVSEHISSMPINNHTE  165 (391)
Q Consensus       140 ~h~~~~p--------~f~~~~~L~~H~~~h~~e~  165 (391)
                      +|.+++|        .|.....|..|+++|....
T Consensus        74 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           74 KEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             SCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             ccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            5777666        7899999999999876543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.59  E-value=2.2e-15  Score=116.76  Aligned_cols=84  Identities=21%  Similarity=0.609  Sum_probs=66.5

Q ss_pred             CCceeccc--cccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352            3 TNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus         3 ~kpf~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      +++|.|..  |++.|.....|..|++.|.             ++++|.|++..|     ++.|.....|..|+++|++++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~~~   64 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHT-------------GEKPYHCDWDGC-----GWKFARSDELTRHYRKHTGHR   64 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSC-------------SSCCEECCSTTT-----CCEESSHHHHHHHHHHHHCCC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcC-------------CCCCcCCCCCCC-----CCccCCHHHHHHHHHHcCCCC
Confidence            46788888  8888888888888888886             677888862227     888888888888888888888


Q ss_pred             CccCCcCccccCChhHHHHHHhhc
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKTC  104 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~~  104 (391)
                      +|.|++|++.|.....|..|+++|
T Consensus        65 ~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           65 PFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CccCCCCCcccCCHHHHHHHHHhh
Confidence            888888888888888888887753

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.58  E-value=5.7e-15  Score=117.03  Aligned_cols=82  Identities=28%  Similarity=0.668  Sum_probs=52.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC--cCccccCChhHHHHHHhh-cCCCceecC-CCCccc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE--KCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFS  118 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~  118 (391)
                      .+++|.|.++.|     ++.|.....|..|+++|+++++|.|.  .|++.|.....|..|+++ +++++|.|. |++.|.
T Consensus        12 ~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   86 (100)
T 2ebt_A           12 KRRIHYCDYPGC-----TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFS   86 (100)
T ss_dssp             SCCCEECCSSSC-----CCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCS
T ss_pred             cCcceEcCCCCC-----CCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccC
Confidence            445666664336     66666666666666666666666664  466666666666666666 566666666 666666


Q ss_pred             ChhHHHHHHHH
Q 016352          119 RRDSFITHRAF  129 (391)
Q Consensus       119 ~~~~L~~H~~~  129 (391)
                      +...|..|+++
T Consensus        87 ~~~~l~~H~~~   97 (100)
T 2ebt_A           87 RSDHLALHMKR   97 (100)
T ss_dssp             SHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            66666666654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.56  E-value=7.8e-15  Score=116.20  Aligned_cols=75  Identities=29%  Similarity=0.561  Sum_probs=63.5

Q ss_pred             CCCCccCCc--CccccCChhHHHHHHhh-cCCCceec--C-CCCcccChhHHHHHHHHhhhhhhhhhhhhcCCCC-----
Q 016352           78 GEKKWKCEK--CSKKYAVQSDWKAHSKT-CGTKEYKC--D-CGTIFSRRDSFITHRAFCDALAEESQKANQGLNP-----  146 (391)
Q Consensus        78 ~ekp~~C~~--C~k~F~~~~~L~~H~~~-~gek~~~C--~-C~k~F~~~~~L~~H~~~h~~~~~~~~~~h~~~~p-----  146 (391)
                      .+++|.|.+  |++.|.....|..|+++ +++++|.|  . |++.|.....|..|++           +|.++++     
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-----------~h~~~~~~~C~~   80 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-----------KHTGAKPFQCGV   80 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHH-----------HHTSCCSCBCSS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHH-----------HhCCCCCeECCC
Confidence            456899986  99999999999999999 78899999  5 9999999999999997           4555554     


Q ss_pred             ---CcCCchhhhhcccccCC
Q 016352          147 ---QLGHVSEHISSMPINNH  163 (391)
Q Consensus       147 ---~f~~~~~L~~H~~~h~~  163 (391)
                         .|.....|..|+++|++
T Consensus        81 C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           81 CNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SCCBCSSHHHHHHHHHHHCC
T ss_pred             CcCccCCHHHHHHHHHHhCC
Confidence               78899999999998864

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=5.7e-15  Score=112.02  Aligned_cols=74  Identities=22%  Similarity=0.581  Sum_probs=58.2

Q ss_pred             CCCCceeccc--cccccCChhhHHHHHH-hcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352            1 MATNRFVCEI--CNKGFQRDQNLQLHRR-GHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus         1 ~g~kpf~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      +|+++|.|..  |++.|.+...|..|++ .|.             ++++|+|+++.|     ++.|.....|..|+++|+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-------------~~~~~~C~~~~C-----~k~f~~~~~L~~H~~~H~   64 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-------------HQKSFSCPEPAC-----GKSFNFKKHLKEHMKLHS   64 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG-------------SCCCEECSCTTT-----CCEESSHHHHHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC-------------CCCCeECCCCCC-----cCccCCHHHHHHHHHHhC
Confidence            4677888876  8888888888888887 576             677888876557     788888888888888888


Q ss_pred             CCCCccCCcCccccC
Q 016352           78 GEKKWKCEKCSKKYA   92 (391)
Q Consensus        78 ~ekp~~C~~C~k~F~   92 (391)
                      ++++|+|++|++.|.
T Consensus        65 ~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           65 DTRDYICEFSGPSSG   79 (79)
T ss_dssp             TSCCCSCCSSSCCCC
T ss_pred             CCCCeeCCCCCCCCC
Confidence            888888888888773

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.55  E-value=3e-15  Score=108.58  Aligned_cols=58  Identities=28%  Similarity=0.670  Sum_probs=39.7

Q ss_pred             CCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      ||||+|++|++.|.....|..|+++|+             ++++|+|++  |     ++.|.....|..|+++|++|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht-------------~ekp~~C~~--C-----~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHL-------------GYRPRSCPE--C-----GKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHH-------------TCCCEECTT--T-----CCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhC-------------CCcCeECCC--C-----CCCcCCHHHHHHHhCccCCCC
Confidence            567777777777777777777777766             666777776  6     677777777777777766653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.54  E-value=9.9e-15  Score=113.07  Aligned_cols=83  Identities=25%  Similarity=0.598  Sum_probs=76.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC--cCccccCChhHHHHHHhh-cCCCceecC-CCCccc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE--KCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFS  118 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~  118 (391)
                      ...+|.|+++.|     ++.|.....|..|+++|+++++|.|+  .|++.|.....|..|+++ +++++|.|+ |++.|.
T Consensus         2 ~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (89)
T 2wbs_A            2 RTATHTCDYAGC-----GKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS   76 (89)
T ss_dssp             -CCCEECCSTTT-----CCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEES
T ss_pred             CCCCeeCCCCCC-----CCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccC
Confidence            356899998778     99999999999999999999999997  599999999999999999 799999999 999999


Q ss_pred             ChhHHHHHHHHh
Q 016352          119 RRDSFITHRAFC  130 (391)
Q Consensus       119 ~~~~L~~H~~~h  130 (391)
                      ....|..|+++|
T Consensus        77 ~~~~l~~H~~~H   88 (89)
T 2wbs_A           77 RSDHLALHMKRH   88 (89)
T ss_dssp             SHHHHHHHGGGG
T ss_pred             CHHHHHHHHHhh
Confidence            999999999743

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.54  E-value=1e-15  Score=119.03  Aligned_cols=79  Identities=22%  Similarity=0.403  Sum_probs=39.6

Q ss_pred             CceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCcc
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWK   83 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~   83 (391)
                      +||.|++|++.|.....|..|++.|+             ++++|.|++  |     ++.|.....|..|+++|++ .+|.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~--C-----~k~f~~~~~L~~H~~~h~~-~~~~   60 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHT-------------GEKPFACDI--C-----GRKFARSDERKRHRDIQHI-LPIL   60 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHH-------------CCCCEECTT--T-----CCEESSHHHHHHHHHHHTH-HHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcC-------------CCCCccCCC--C-----CCccCCHHHHHHHHHHhCC-Ccch
Confidence            45555555555555555555555544             444555555  4     5555555555555554442 3445


Q ss_pred             CCcCccccCChhHHHHHHhh
Q 016352           84 CEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        84 C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |+.|++.|.....|..|++.
T Consensus        61 c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C           61 EDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhHHHHHH
Confidence            55555555555555555443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.54  E-value=1.3e-15  Score=118.55  Aligned_cols=81  Identities=20%  Similarity=0.374  Sum_probs=76.3

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhhcCCCceecC-CCCcccChhH
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDS  122 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~  122 (391)
                      +++|.|++  |     ++.|.....|..|+++|+++++|.|++|++.|.....|..|++++..++|.|+ |++.|.....
T Consensus         1 ek~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~   73 (88)
T 1llm_C            1 MKPFQCRI--C-----MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYH   73 (88)
T ss_dssp             CCCEECTT--T-----CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCC--C-----CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhh
Confidence            47899999  9     99999999999999999999999999999999999999999999556899999 9999999999


Q ss_pred             HHHHHHHhh
Q 016352          123 FITHRAFCD  131 (391)
Q Consensus       123 L~~H~~~h~  131 (391)
                      |..|++.++
T Consensus        74 L~~H~~~~h   82 (88)
T 1llm_C           74 LENEVARLK   82 (88)
T ss_dssp             HHHHHHHHH
T ss_pred             hHHHHHHHH
Confidence            999998543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=9.7e-15  Score=112.36  Aligned_cols=60  Identities=25%  Similarity=0.560  Sum_probs=50.5

Q ss_pred             HHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCC----CceecC-CCCcccChhHHHHHHH
Q 016352           69 IKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGT----KEYKCD-CGTIFSRRDSFITHRA  128 (391)
Q Consensus        69 L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~ge----k~~~C~-C~k~F~~~~~L~~H~~  128 (391)
                      |.+|+++|+++++|.|++|++.|.....|..|+++ +.+    ++|.|. |++.|.+...|..|++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~   68 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD   68 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHH
Confidence            45688888888889999999999988889888887 544    688998 9999988888888887

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.49  E-value=2.7e-14  Score=103.55  Aligned_cols=54  Identities=26%  Similarity=0.555  Sum_probs=43.9

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhhc
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTC  104 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~  104 (391)
                      |+||+|++  |     ++.|.....|..|+++|++++||.|++|++.|.....|..|+++|
T Consensus         2 EKpy~C~~--C-----~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            2 ERPFFCNF--C-----GKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCCEECTT--T-----CCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred             CCCccCCC--C-----CCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCcc
Confidence            67888888  7     888888888888888888888888888888888888888888774

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.47  E-value=7.3e-14  Score=106.90  Aligned_cols=78  Identities=27%  Similarity=0.600  Sum_probs=60.5

Q ss_pred             ceec--cccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCc
Q 016352            5 RFVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (391)
Q Consensus         5 pf~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~   82 (391)
                      ||+|  +.|++.|.....|..|++.|.             ++++|+|++.+|     ++.|.....|..|+++|++   |
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-----~~~f~~~~~l~~H~~~h~~---~   59 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT-------------QQLPYECPHEGC-----DKRFSLPSRLKRHEKVHAG---Y   59 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH-------------TTCCEECCSTTC-----CCEESSHHHHHHHHHHHHS---E
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC-------------CCCCeeCCCCCC-----cCccCCHHHHHHHHHHhCC---C
Confidence            6778  778888888888888888776             677788865447     7888888888888888777   7


Q ss_pred             cCCc---CccccCChhHHHHHHhh
Q 016352           83 KCEK---CSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        83 ~C~~---C~k~F~~~~~L~~H~~~  103 (391)
                      .|..   |++.|.....|..|+++
T Consensus        60 ~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A           60 PCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             ECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCccCCHHHHHHHHHh
Confidence            7877   88888888888887765

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.45  E-value=4.9e-15  Score=123.46  Aligned_cols=109  Identities=13%  Similarity=0.234  Sum_probs=84.4

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCcc------CCHHHHHHHHH
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARAL------GDLTGIKKHFS   74 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F------~~~~~L~~H~~   74 (391)
                      .|.|+|.|..++....  ..+..|.+.+..          ...++.+.|++  |     .+.|      .....|..|+ 
T Consensus         8 ~~~k~~~~~~k~~~~~--~s~ee~~~~~~l----------~~~~~~~~c~~--~-----~~~~~~~~~~~~~~~l~~h~-   67 (129)
T 2wbt_A            8 SGSKKYLSNHKGIFIH--VTLEELKRYHQL----------TPEQKRLIRAI--V-----KTLIHNPQLLDESSYLYRLL-   67 (129)
T ss_dssp             TTCCGGGGCSSCEEEE--CCHHHHHHHTTS----------CHHHHHHHHHH--H-----HHHHHCGGGTTTHHHHHHHH-
T ss_pred             ccccccccccCCeeee--ecHHhhhccccC----------ChhhCcccchh--h-----hcccCCCcccCCHHHHHHHH-
Confidence            3789998877654332  334455444430          11356677887  6     4544      4667777777 


Q ss_pred             HhcCCCCccCCcCccccCChhHHHHHHhhcCCCceecC-CCCcccChhHHHHHHHHh
Q 016352           75 RKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus        75 ~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      .|++++||.|++|++.|.....|..|+++| ++||.|+ |++.|.+...|..|++.|
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h  123 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKK  123 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHH
Confidence            689999999999999999999999999999 9999999 999999999999999854

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.3e-13  Score=104.39  Aligned_cols=71  Identities=23%  Similarity=0.521  Sum_probs=66.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHH-HhcCCCCccCCc--CccccCChhHHHHHHhh-cCCCceecC-CCCcc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFS-RKHGEKKWKCEK--CSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIF  117 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~-~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F  117 (391)
                      ++++|.|..+.|     ++.|.....|..|++ .|.++++|+|++  |++.|..+..|..|+++ +++++|.|+ |++.|
T Consensus         4 ~~~~~~C~~~~C-----~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGC-----GRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTT-----CCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCC-----cCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            678899987669     999999999999999 799999999999  99999999999999999 799999999 99998


Q ss_pred             c
Q 016352          118 S  118 (391)
Q Consensus       118 ~  118 (391)
                      .
T Consensus        79 ~   79 (79)
T 2dlk_A           79 G   79 (79)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=8.6e-14  Score=105.26  Aligned_cols=62  Identities=27%  Similarity=0.639  Sum_probs=40.7

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      ++++|.|++  |     ++.|.....|..|+++|+++++|+|++|++.|.....|..|+++ ++++||+|
T Consensus        15 ~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDE--C-----GKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSS--S-----CCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCC--C-----CcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            456666666  6     66666666666666666666666666666666666666666666 56666665

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=5.8e-14  Score=112.93  Aligned_cols=69  Identities=19%  Similarity=0.372  Sum_probs=39.6

Q ss_pred             CCCceeccccccccCChhhHHHHHH-hcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHH-HHHhcCC
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKH-FSRKHGE   79 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H-~~~H~~e   79 (391)
                      |++||.|+.|++.|..+..|.+|++ .|++          ..++++|+|++  |     ++.|.....|..| +++|+++
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~----------~~~ekpf~C~~--C-----gk~F~~~~~L~~H~~r~Htge   77 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPN----------VVLNSSYVCVE--C-----NFLTKRYDALSEHNLKYHPGE   77 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSS----------CCCSCCEEETT--T-----TEEESSTHHHHTHHHHTSTTC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCC----------CCCCCCcCCCC--C-----CcccCCHHHHHHHHHHhcCCC
Confidence            5566666666666666666666655 3520          00355666666  6     6666666666666 5666666


Q ss_pred             CCccCCcC
Q 016352           80 KKWKCEKC   87 (391)
Q Consensus        80 kp~~C~~C   87 (391)
                      +||.|.++
T Consensus        78 kpy~C~~~   85 (102)
T 2ghf_A           78 ENFKLTMV   85 (102)
T ss_dssp             CCEEEEEC
T ss_pred             CCeeCCcc
Confidence            66666553

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=7e-14  Score=107.50  Aligned_cols=77  Identities=21%  Similarity=0.483  Sum_probs=70.8

Q ss_pred             HHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC----CCccCCcCccccCChhH
Q 016352           21 LQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE----KKWKCEKCSKKYAVQSD   96 (391)
Q Consensus        21 L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e----kp~~C~~C~k~F~~~~~   96 (391)
                      |.+|+++|+             ++++|.|++  |     ++.|.....|..|++.|+.+    ++|+|++|++.|..+..
T Consensus         3 ~~~H~~~H~-------------~~k~~~C~~--C-----~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~   62 (86)
T 1x6h_A            3 SGSSGRTHT-------------GEKPYACSH--C-----DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT   62 (86)
T ss_dssp             TTCCSTTCC-------------CCCCEECSS--S-----SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHH
T ss_pred             cccccceec-------------CCCCCcCCC--C-----CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHH
Confidence            556788887             889999999  9     99999999999999988876    79999999999999999


Q ss_pred             HHHHHhh-cCCCceecC-CCCcc
Q 016352           97 WKAHSKT-CGTKEYKCD-CGTIF  117 (391)
Q Consensus        97 L~~H~~~-~gek~~~C~-C~k~F  117 (391)
                      |..|+++ ++++++.|. |+..|
T Consensus        63 L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           63 MARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             HHHHHHHccCCCCcccCCCCCCC
Confidence            9999999 899999999 99875

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=3.4e-13  Score=101.11  Aligned_cols=60  Identities=23%  Similarity=0.608  Sum_probs=31.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCce
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEY  109 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~  109 (391)
                      ++++|+|+.  |     ++.|.....|..|+++|+++++|+|++|++.|..+..|..|+++ ++++||
T Consensus        14 ~~~~~~C~~--C-----~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDR--C-----QASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTT--S-----SCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCC--C-----CceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            344555555  5     55555555555555555555555555555555555555555555 344443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.37  E-value=9e-13  Score=100.73  Aligned_cols=75  Identities=28%  Similarity=0.674  Sum_probs=69.8

Q ss_pred             eeec--CCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc--CccccCChhHHHHHHhh-cCCCceecC----CCCc
Q 016352           46 VYVC--PEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK--CSKKYAVQSDWKAHSKT-CGTKEYKCD----CGTI  116 (391)
Q Consensus        46 ~~~C--~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~-~gek~~~C~----C~k~  116 (391)
                      ||+|  +.  |     ++.|.....|..|+++|+++++|+|++  |++.|.....|..|+++ ++   |.|.    |++.
T Consensus         1 p~~C~~~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~   70 (85)
T 2j7j_A            1 MYVCHFEN--C-----GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFV   70 (85)
T ss_dssp             CEECCSTT--C-----CCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCE
T ss_pred             CccCCCCC--C-----CcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCc
Confidence            5899  77  9     999999999999999999999999998  99999999999999999 55   9884    9999


Q ss_pred             ccChhHHHHHHHHh
Q 016352          117 FSRRDSFITHRAFC  130 (391)
Q Consensus       117 F~~~~~L~~H~~~h  130 (391)
                      |.+...|..|+++|
T Consensus        71 f~~~~~l~~H~~~h   84 (85)
T 2j7j_A           71 GKTWTLYLKHVAEC   84 (85)
T ss_dssp             ESSHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHhc
Confidence            99999999999753

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=6e-13  Score=105.69  Aligned_cols=69  Identities=14%  Similarity=0.285  Sum_probs=63.7

Q ss_pred             CCccCCHHHHHHHHHHhcCCCCccCCcCcccc-CChhHHHHHHhhcCCCceecC-CCCcccChhHHHHH-HH
Q 016352           60 ARALGDLTGIKKHFSRKHGEKKWKCEKCSKKY-AVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFITH-RA  128 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F-~~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~L~~H-~~  128 (391)
                      ...|.....|..|++.|+++++|.|++|++.| ..+..|+.|+++|++++|.|. |++.|.....|..| ++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~   84 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMA   84 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHH
Confidence            34667778899999999999999999999999 999999999999988999999 99999999999999 65

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=1.9e-13  Score=108.71  Aligned_cols=69  Identities=16%  Similarity=0.219  Sum_probs=62.4

Q ss_pred             CccCCHHHHHHHHHHhcCCCCccCCcCccccC-ChhHHHHHHhh-cC-CCceecC-CCCcccChhHHHHHHHH
Q 016352           61 RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYA-VQSDWKAHSKT-CG-TKEYKCD-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus        61 k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~-~~~~L~~H~~~-~g-ek~~~C~-C~k~F~~~~~L~~H~~~  129 (391)
                      ..+.....+..|+++|+++++|.|++|++.|. .+..|..|+++ ++ +++|.|. |++.|.+...|..|+++
T Consensus         4 ~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~   76 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMA   76 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHH
T ss_pred             CCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHH
Confidence            34555666788999999999999999999999 99999999999 67 8999999 99999999999999973

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=8.9e-13  Score=99.61  Aligned_cols=54  Identities=37%  Similarity=0.887  Sum_probs=51.2

Q ss_pred             HhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHH
Q 016352           75 RKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRA  128 (391)
Q Consensus        75 ~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~  128 (391)
                      .+.++++|.|++|++.|.....|..|+++ +++++|.|+ |++.|.....|..|++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   67 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR   67 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence            46678999999999999999999999999 789999999 9999999999999997

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.5e-12  Score=96.53  Aligned_cols=60  Identities=22%  Similarity=0.454  Sum_probs=35.3

Q ss_pred             CCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCC
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp   81 (391)
                      +++||+|++|++.|.....|.+|++.|+             ++++|+|++  |     ++.|.....|..|+++|++++|
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~--C-----~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHC-------------TDRPFKCNY--C-----SFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGC-------------CSCSEECSS--S-----SCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcC-------------CCCCEeCCC--C-----CCccCCHHHHHHHHHHHhCCCC
Confidence            4555666666666666666666665554             455566665  5     5666666666666666655554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3.7e-13  Score=107.00  Aligned_cols=79  Identities=20%  Similarity=0.405  Sum_probs=71.9

Q ss_pred             ccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccC-CHHHHHHHHHHhcC-CCCccCCcCcccc
Q 016352           14 GFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALG-DLTGIKKHFSRKHG-EKKWKCEKCSKKY   91 (391)
Q Consensus        14 ~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~-~~~~L~~H~~~H~~-ekp~~C~~C~k~F   91 (391)
                      .+.....+..|++.|.             ++++|+|++  |     ++.|. ....|..|+++|++ +++|+|++|++.|
T Consensus         5 s~~~~~~~~~h~~~h~-------------~~~~~~C~~--C-----~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F   64 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIH-------------ERGEAVCPT--C-----NVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQF   64 (98)
T ss_dssp             CCCCCCSCSHHHHTTT-------------TTSCCCCTT--T-----CCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCC
T ss_pred             CCCCCCcHHHHHHHhc-------------cCCCcCCCC--C-----CCChhhhHHHHHHHHHHHcCCCCCEECCCCCCcc
Confidence            4556667888999998             889999999  9     99999 99999999999999 9999999999999


Q ss_pred             CChhHHHHHHhh-cCCCceecC
Q 016352           92 AVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        92 ~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      ..+..|..|+++ ++++|+...
T Consensus        65 ~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           65 KSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             SCHHHHHHHHHHHSCSCSSCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCCCC
Confidence            999999999999 899887654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.8e-12  Score=102.89  Aligned_cols=77  Identities=17%  Similarity=0.274  Sum_probs=70.1

Q ss_pred             ccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCcc-CCHHHHHHHHHHhcCCCCccCCcCccc
Q 016352           12 NKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARAL-GDLTGIKKHFSRKHGEKKWKCEKCSKK   90 (391)
Q Consensus        12 ~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F-~~~~~L~~H~~~H~~ekp~~C~~C~k~   90 (391)
                      ...|.....|..|++.|.             ++++|.|++  |     ++.| .....|..|+++| ++++|.|.+|++.
T Consensus        13 ~~~~~~~~~~~~~~~~~~-------------~~~~~~C~~--C-----~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~   71 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIV-------------DKGSVSCPT--C-----QAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQ   71 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHH-------------HTSCEECTT--T-----CSCEESSHHHHHHHHHHH-CCCCCCCSSSCCC
T ss_pred             CCCCCCchHHHHHHHHhc-------------CCCCcCCCC--C-----CCCcccCHHHHHHHHHHH-CCCCeECCCCCCe
Confidence            456788888999999987             789999999  9     9999 9999999999999 9999999999999


Q ss_pred             cCChhHHHHH-HhhcCCCce
Q 016352           91 YAVQSDWKAH-SKTCGTKEY  109 (391)
Q Consensus        91 F~~~~~L~~H-~~~~gek~~  109 (391)
                      |..+..|..| +++|.++||
T Consensus        72 F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           72 LRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CSSHHHHHHHHHHHTCCCSS
T ss_pred             eCCHHHHHHHhHHhcCCCCC
Confidence            9999999999 777766665

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=4.6e-12  Score=94.43  Aligned_cols=54  Identities=28%  Similarity=0.585  Sum_probs=37.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|+|++|++.|..+..|..|+++
T Consensus        11 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   64 (72)
T 1x6e_A           11 GEKPYGCVE--C-----GKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI   64 (72)
T ss_dssp             TCCCEECSS--S-----CCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCccCCC--C-----CCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHh
Confidence            566667766  6     66676666677776666666667777777777766667766666

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=8e-13  Score=99.85  Aligned_cols=60  Identities=20%  Similarity=0.448  Sum_probs=51.9

Q ss_pred             HHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cC--CCceecC-CCCcccChhHHHHHHHH
Q 016352           70 KKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CG--TKEYKCD-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus        70 ~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~g--ek~~~C~-C~k~F~~~~~L~~H~~~  129 (391)
                      .+|+++|++++||.|++|++.|..+..|..|++. |.  +++|.|+ |++.|.+...|..|++.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH
Confidence            4578889999999999999999999999999875 53  3789999 99999999999999974

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=1.7e-12  Score=94.83  Aligned_cols=56  Identities=32%  Similarity=0.642  Sum_probs=36.7

Q ss_pred             HHhcCCCCccCCcCccccCChhHHHHHHhh-c--CCCceecC-CCCcccChhHHHHHHHH
Q 016352           74 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-C--GTKEYKCD-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus        74 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~--gek~~~C~-C~k~F~~~~~L~~H~~~  129 (391)
                      ++|+++++|.|++|++.|.....|..|+++ |  ++++|.|+ |++.|.+.+.|..|++.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~   62 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI   62 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHH
Confidence            456666666666666666666666666665 4  45666666 66666666666666654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3e-12  Score=102.85  Aligned_cols=67  Identities=18%  Similarity=0.243  Sum_probs=61.0

Q ss_pred             cCCceeecCCCCCCCCCCCCccCCHHHHHHHHH-Hh---cCCCCccCCcCccccCChhHHHHH-Hhh-cCCCceecC-CC
Q 016352           42 IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFS-RK---HGEKKWKCEKCSKKYAVQSDWKAH-SKT-CGTKEYKCD-CG  114 (391)
Q Consensus        42 ~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~-~H---~~ekp~~C~~C~k~F~~~~~L~~H-~~~-~gek~~~C~-C~  114 (391)
                      .++++|.|++  |     ++.|.....|..|++ +|   .+++||+|++|++.|..+..|..| +++ .+++||.|. +.
T Consensus        14 ~gekpy~C~~--C-----gk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKY--C-----TFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSS--C-----SCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCC--C-----CCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            3889999999  9     999999999999998 58   568999999999999999999999 788 799999998 55


Q ss_pred             C
Q 016352          115 T  115 (391)
Q Consensus       115 k  115 (391)
                      .
T Consensus        87 ~   87 (102)
T 2ghf_A           87 R   87 (102)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.27  E-value=5.1e-12  Score=94.60  Aligned_cols=56  Identities=29%  Similarity=0.773  Sum_probs=51.7

Q ss_pred             HHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHH
Q 016352           74 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus        74 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~  129 (391)
                      ..+.++++|+|++|++.|..+..|..|+++ +++++|+|. |++.|.+...|..|+++
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~   67 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI   67 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHh
Confidence            356788999999999999999999999999 789999999 99999999999999973

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.26  E-value=4.1e-12  Score=89.83  Aligned_cols=56  Identities=29%  Similarity=0.581  Sum_probs=32.3

Q ss_pred             CCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      |++||+|.+|++.|.....|..|++.|+             ++++|.|++  |     ++.|.....|..|+++|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHT-------------GEKPYKCEF--C-----EYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHH-------------CCCCEECSS--S-----SCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcC-------------CCCCcCCCC--C-----cchhCCHHHHHHHHHHhc
Confidence            4556666666666666666666666665             555666666  6     666666666666666554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.25  E-value=4.7e-12  Score=98.28  Aligned_cols=54  Identities=15%  Similarity=0.457  Sum_probs=31.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      ..++|.|++  |     ++.|.....|..|+++|++++||.|++|++.|..+..|.+|++.
T Consensus        25 ~~~~h~C~~--C-----gk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           25 SAECHLCPV--C-----GESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             CCTTEECTT--S-----CCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCEECCC--C-----CCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcc
Confidence            345556655  5     56666666666666666655566666666666665555555543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.23  E-value=2.6e-12  Score=106.74  Aligned_cols=81  Identities=17%  Similarity=0.314  Sum_probs=70.5

Q ss_pred             CCceeccccccccC------ChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHh
Q 016352            3 TNRFVCEICNKGFQ------RDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRK   76 (391)
Q Consensus         3 ~kpf~C~~C~k~F~------~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H   76 (391)
                      +++|.|++|.+.|.      ....|..|+ .|+             ++++|.|++  |     ++.|.....|..|+++|
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~-------------~~~~~~C~~--C-----~k~f~~~~~l~~H~~~H   97 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASK-------------AISQFVCPL--C-----LMPFSSSVSLKQHIRYT   97 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHH-------------HHCSEECTT--T-----CCEESSHHHHHHHHHHT
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhC-------------CCCCeECCC--C-----CcccCCHhHHHHHHHHC
Confidence            35678999887776      556677776 465             789999999  9     99999999999999999


Q ss_pred             cCCCCccCCcCccccCChhHHHHHHhh-cCC
Q 016352           77 HGEKKWKCEKCSKKYAVQSDWKAHSKT-CGT  106 (391)
Q Consensus        77 ~~ekp~~C~~C~k~F~~~~~L~~H~~~-~ge  106 (391)
                        ++||.|++|++.|.....|..|+++ ++.
T Consensus        98 --~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           98 --EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             --CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             --CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence              8999999999999999999999999 554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=1.1e-11  Score=91.79  Aligned_cols=60  Identities=20%  Similarity=0.336  Sum_probs=49.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCce
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEY  109 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~  109 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|+|++|++.|..+..|..|+++ ++++|.
T Consensus         6 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            6 SGHPEKCSE--C-----SYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCSEECSS--S-----SCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCeECCC--C-----CcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            677888888  8     88888888888888888888888888888888888888888888 777664

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.20  E-value=1.6e-11  Score=95.25  Aligned_cols=59  Identities=19%  Similarity=0.464  Sum_probs=54.4

Q ss_pred             CCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHH-HHhcCCC
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHF-SRKHGEK   80 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~-~~H~~ek   80 (391)
                      +.++|.|++|++.|.++..|.+|+++|+             ++++|.|++  |     ++.|.....|.+|+ ++|.+|+
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~-------------~~k~~~C~~--C-----~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLH-------------AAQVFPCKY--C-----PATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTS-------------CSSSEECTT--S-----SCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhcc-------------CCCccCCCC--C-----CCEeCCHHHHHHhCcccCcCCC
Confidence            4688999999999999999999999998             899999999  9     99999999999997 5687764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1e-11  Score=93.81  Aligned_cols=53  Identities=25%  Similarity=0.597  Sum_probs=37.1

Q ss_pred             hcCCCCccCCcCccccCChhHHHHHHhh-cC---CCceecC-CCCcccChhHHHHHHH
Q 016352           76 KHGEKKWKCEKCSKKYAVQSDWKAHSKT-CG---TKEYKCD-CGTIFSRRDSFITHRA  128 (391)
Q Consensus        76 H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~g---ek~~~C~-C~k~F~~~~~L~~H~~  128 (391)
                      |+++++|+|++|++.|..+..|..|+++ ++   +++|.|. |++.|.+...|..|++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~   59 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS   59 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHH
Confidence            5666777777777777777777777766 33   6677777 7777777777777775

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=3.1e-14  Score=105.87  Aligned_cols=55  Identities=18%  Similarity=0.326  Sum_probs=44.5

Q ss_pred             HHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhhcCCCceecC-CCCcccChhHHHHHH
Q 016352           67 TGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFITHR  127 (391)
Q Consensus        67 ~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~L~~H~  127 (391)
                      ..|..|+++|+++++|.|++|++.|.....|..      +++|.|+ |++.|.+...|..|+
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~   59 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDE   59 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCS
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHH
Confidence            346678889999999999999999998887765      7889999 999998776555444

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.7e-11  Score=91.23  Aligned_cols=58  Identities=33%  Similarity=0.665  Sum_probs=54.6

Q ss_pred             HHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHHh
Q 016352           73 FSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus        73 ~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      .++|+++++|+|++|++.|.....|..|+++ +++++|.|. |++.|.+...|..|+++|
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            4678999999999999999999999999999 789999999 999999999999999854

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.18  E-value=2.5e-11  Score=85.73  Aligned_cols=56  Identities=27%  Similarity=0.547  Sum_probs=37.3

Q ss_pred             ceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      ||+|++|++.|.....|..|++.|+             ++++|.|++  |     ++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT-------------DVRPYHCTY--C-----NFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS-------------SCCCEECSS--S-----SCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC-------------CCCCccCCC--C-----CchhcCHHHHHHHHHHhcccC
Confidence            5666666666666666666666665             566666666  6     666666666666666666554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.5e-11  Score=91.67  Aligned_cols=55  Identities=20%  Similarity=0.471  Sum_probs=29.4

Q ss_pred             CCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHH
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHF   73 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~   73 (391)
                      |++||+|++|++.|.....|.+|++.|+.          ...+++|.|++  |     ++.|.....|..|+
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~----------~~~~~~~~C~~--C-----~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAE----------TVAALRFPCEF--C-----GKRFEKPDSVAAHR   58 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHH----------HTTTCCEECTT--T-----CCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhc----------cCCCcccCCCC--C-----CchhCCHHHHHHHH
Confidence            45555555555555555555555555530          00145555555  5     55555555555555

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=2.6e-11  Score=88.42  Aligned_cols=54  Identities=22%  Similarity=0.558  Sum_probs=33.1

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHH-h-cCCCCccCCcCccccCChhHHHHHHhh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSR-K-HGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~-H-~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      ++++|.|+.  |     ++.|.....|..|++. | .++++|.|+.|++.|.....|..|+++
T Consensus         7 ~~k~~~C~~--C-----~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~   62 (66)
T 2drp_A            7 GEHTYRCKV--C-----SRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI   62 (66)
T ss_dssp             ETTEEECTT--T-----CCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCcceECCC--C-----cchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHH
Confidence            555666666  6     6666666666666655 4 355666666666666666666666655

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.17  E-value=2.8e-11  Score=85.48  Aligned_cols=53  Identities=23%  Similarity=0.421  Sum_probs=32.2

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      +++|+|++  |     ++.|.....|..|+++|++++||.|++|++.|.....|..|+++
T Consensus         2 ~~~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            2 SSSRECSY--C-----GKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ---CBCTT--T-----CCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCccCCC--C-----cchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            35566666  6     66666666666666666666666666666666666666666655

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=1e-11  Score=93.73  Aligned_cols=66  Identities=21%  Similarity=0.382  Sum_probs=58.0

Q ss_pred             HHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHH-HhcCC-CCccCCcCccccCChhHHH
Q 016352           21 LQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFS-RKHGE-KKWKCEKCSKKYAVQSDWK   98 (391)
Q Consensus        21 L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~-~H~~e-kp~~C~~C~k~F~~~~~L~   98 (391)
                      |.+|+++|+             ++++|.|++  |     ++.|.....|..|++ .|.++ ++|+|++|++.|..+..|.
T Consensus         3 ~~~H~~~H~-------------~~k~~~C~~--C-----~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~   62 (77)
T 2ct1_A            3 SGSSGRTHS-------------GEKPYECYI--C-----HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG   62 (77)
T ss_dssp             CCCCCCCCS-------------CCCSEECTT--T-----CCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHH
T ss_pred             CCccccccC-------------CCCCeECCC--c-----CchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHH
Confidence            345777776             899999999  9     999999999999997 57664 8999999999999999999


Q ss_pred             HHHhh-cCC
Q 016352           99 AHSKT-CGT  106 (391)
Q Consensus        99 ~H~~~-~ge  106 (391)
                      .|+++ |+.
T Consensus        63 ~H~~~~H~~   71 (77)
T 2ct1_A           63 VHLRKQHSY   71 (77)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHhCCC
Confidence            99998 643

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.12  E-value=6.9e-11  Score=92.44  Aligned_cols=52  Identities=15%  Similarity=0.300  Sum_probs=25.0

Q ss_pred             CCccCCHHHHHHHHHH-hcCCCC--------ccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           60 ARALGDLTGIKKHFSR-KHGEKK--------WKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~-H~~ekp--------~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      ++.|.....|..|+++ |.++++        |.|++|++.|..+..|..|+++ ++++||.|
T Consensus        32 ~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           32 DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             CCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             ccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            4444444444444444 444443        4455555555555555555444 34444444

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.10  E-value=9.1e-11  Score=82.77  Aligned_cols=54  Identities=20%  Similarity=0.524  Sum_probs=40.1

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCC
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGT  106 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~ge  106 (391)
                      ||.|+.  |     ++.|.....|..|+++|+++++|.|++|++.|.....|..|+++ +++
T Consensus         1 p~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEE--C-----GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTT--T-----CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCC--C-----cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            467777  7     77777777777777777777777777777777777777777776 444

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=8.3e-11  Score=83.98  Aligned_cols=55  Identities=33%  Similarity=0.715  Sum_probs=33.6

Q ss_pred             CceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHH-HHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHF-SRKHG   78 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~-~~H~~   78 (391)
                      +||+|++|++.|.....|..|++.|+             ++++|.|+.  |     ++.|.....|..|+ ++|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~--C-----~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT-------------NEKPYPCGL--C-----NRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT-------------SSCSEECTT--T-----CCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhC-------------CCCCccCCC--C-----CCccCCHHHHHHHHHHHcCC
Confidence            45666666666666666666666665             555666666  6     66666666666664 44543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=2.3e-10  Score=81.59  Aligned_cols=50  Identities=24%  Similarity=0.633  Sum_probs=33.8

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHh
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSK  102 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~  102 (391)
                      +|.|++  |     ++.|.....|..|+++|+++++|.|++|++.|..+..|..|++
T Consensus         2 ~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   51 (60)
T 2adr_A            2 SFVCEV--C-----TRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ   51 (60)
T ss_dssp             CBCCTT--T-----CCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHT
T ss_pred             cCcCCC--C-----ccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            566666  6     6666666666666666666666666666666666666666653

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.1e-12  Score=97.40  Aligned_cols=69  Identities=17%  Similarity=0.260  Sum_probs=61.9

Q ss_pred             hhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHH
Q 016352           18 DQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDW   97 (391)
Q Consensus        18 ~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L   97 (391)
                      ...|..|++.|.             ++++|.|++  |     ++.|.....|..       +++|.|++|++.|.....|
T Consensus         3 ~~~l~~H~~~h~-------------~~~~~~C~~--C-----~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l   55 (73)
T 2ctu_A            3 SGSSGKRQKIHL-------------GDRSQKCSK--C-----GIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAAL   55 (73)
T ss_dssp             CCSCCCCCCCCC-------------CCSEEECSS--S-----CCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSS
T ss_pred             chhHHHHHHHhC-------------CCCCeeCCc--c-----cchhCCHHHhCc-------CCCCCCCCCChhhcCHHHH
Confidence            456777888887             889999999  9     999998888776       7899999999999999999


Q ss_pred             HHHHhh-cCCCceecC-C
Q 016352           98 KAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        98 ~~H~~~-~gek~~~C~-C  113 (391)
                      ..|+++ +++++|.|+ |
T Consensus        56 ~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           56 NKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHhhcCCCCCCCCCC
Confidence            999999 789999998 7

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.2e-10  Score=83.73  Aligned_cols=52  Identities=21%  Similarity=0.384  Sum_probs=32.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC-cCccccCChhHHHHHHhh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE-KCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~-~C~k~F~~~~~L~~H~~~  103 (391)
                      ++++|+|+.  |     ++.|. ...|..|+++ ++++||.|+ .|++.|..+..|..|+++
T Consensus         7 ~~~~~~C~~--C-----~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~   59 (66)
T 2eod_A            7 GKRTQPCTY--C-----TKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKD   59 (66)
T ss_dssp             CCCEEECSS--S-----CCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred             CCCCeeccc--c-----CCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHh
Confidence            455666666  6     66666 6666666666 666666666 666666666666666655

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.99  E-value=3.4e-10  Score=84.08  Aligned_cols=57  Identities=25%  Similarity=0.635  Sum_probs=48.7

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhhc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTC  104 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~  104 (391)
                      ++++|.|++..|     ++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|
T Consensus        16 ~~~~~~C~~~~C-----~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           16 KMRPYACPVESC-----DRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCEECSSTTB-----CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCccCCcCCCC-----CCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            778899962228     899999999999999999999999999999999999999998764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.98  E-value=6.2e-10  Score=86.92  Aligned_cols=49  Identities=16%  Similarity=0.377  Sum_probs=44.6

Q ss_pred             CccCCcCccccCChhHHHHHHhh-c-CCCc--------eecC-CCCcccChhHHHHHHHH
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT-C-GTKE--------YKCD-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~-~-gek~--------~~C~-C~k~F~~~~~L~~H~~~  129 (391)
                      .|.|..|++.|.....|..|+++ | ++++        |.|. |++.|.....|..|+++
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~   84 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV   84 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHH
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHh
Confidence            57899999999999999999998 6 5556        8999 99999999999999974

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.97  E-value=5.8e-10  Score=82.80  Aligned_cols=57  Identities=23%  Similarity=0.529  Sum_probs=52.3

Q ss_pred             HHhcCCCCccCC--cCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHHHHHHHHh
Q 016352           74 SRKHGEKKWKCE--KCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus        74 ~~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      .+|.++++|.|+  .|++.|..+..|..|+++ +++++|.|+ |++.|.+...|..|+++|
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            357789999997  599999999999999999 799999999 999999999999999743

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.9e-10  Score=75.95  Aligned_cols=42  Identities=24%  Similarity=0.381  Sum_probs=29.0

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ ++++||.|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            55666677777777777777777777777766 566777776 5

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.89  E-value=4e-10  Score=76.04  Aligned_cols=42  Identities=31%  Similarity=0.447  Sum_probs=29.5

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||+|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666777777777777777777777777776 566777776 5

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.1e-10  Score=75.90  Aligned_cols=42  Identities=26%  Similarity=0.405  Sum_probs=27.5

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ ++++||.|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            45566666666666666666666666666666 566666666 5

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.89  E-value=4.1e-10  Score=75.98  Aligned_cols=41  Identities=24%  Similarity=0.468  Sum_probs=24.0

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            44555555666666666666666666666555 455556555

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.6e-10  Score=75.72  Aligned_cols=42  Identities=29%  Similarity=0.408  Sum_probs=27.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+ |
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566666666666666666666666666666 566666666 5

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.89  E-value=4.3e-10  Score=75.82  Aligned_cols=42  Identities=29%  Similarity=0.498  Sum_probs=29.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            55666777777777777777777777777766 566777776 5

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.3e-10  Score=75.81  Aligned_cols=42  Identities=24%  Similarity=0.381  Sum_probs=27.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ +++++|.|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666 566666666 5

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.88  E-value=3.9e-10  Score=76.04  Aligned_cols=41  Identities=32%  Similarity=0.527  Sum_probs=23.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            44555555555555555555555555555555 455555555

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.2e-10  Score=75.32  Aligned_cols=41  Identities=29%  Similarity=0.511  Sum_probs=26.0

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .++++|+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45566666666666666666666666666666 466666665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.5e-10  Score=76.32  Aligned_cols=41  Identities=27%  Similarity=0.447  Sum_probs=24.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555666666666666666666666666665 455666665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=3.6e-10  Score=75.45  Aligned_cols=38  Identities=16%  Similarity=0.222  Sum_probs=19.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|+|++|
T Consensus         7 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            7 GEKPFGCSC--C-----EKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SCCCEECSS--S-----SCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCccCCC--C-----CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444555555  5     5555555555555555555555555444

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.8e-10  Score=75.62  Aligned_cols=41  Identities=29%  Similarity=0.441  Sum_probs=25.9

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            44556666666666666666666666666666 456666665

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4e-10  Score=75.98  Aligned_cols=41  Identities=24%  Similarity=0.457  Sum_probs=22.5

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            44455555555555555555555555555555 455555555

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.7e-10  Score=75.54  Aligned_cols=42  Identities=24%  Similarity=0.407  Sum_probs=28.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+ |
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55566666667777777777766667766666 566666666 5

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.3e-10  Score=75.72  Aligned_cols=41  Identities=29%  Similarity=0.488  Sum_probs=25.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            45556666666666666666666666666666 456666665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.1e-10  Score=75.35  Aligned_cols=42  Identities=29%  Similarity=0.467  Sum_probs=30.0

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ ++++||.|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55667777777777777777777777777777 567777776 5

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.1e-10  Score=75.44  Aligned_cols=41  Identities=29%  Similarity=0.417  Sum_probs=25.1

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            45556666666666666666666666666665 456666665

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.87  E-value=4.2e-10  Score=75.79  Aligned_cols=42  Identities=24%  Similarity=0.446  Sum_probs=27.3

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ ++++||+|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666666666666666666666666666 466666666 5

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4e-10  Score=75.96  Aligned_cols=41  Identities=29%  Similarity=0.449  Sum_probs=23.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            44555555555555555555555555555555 455555555

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.3e-10  Score=75.75  Aligned_cols=41  Identities=24%  Similarity=0.421  Sum_probs=20.3

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444455555555555555555555555444 344555554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.4e-10  Score=75.77  Aligned_cols=41  Identities=27%  Similarity=0.417  Sum_probs=21.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            44455555555555555555555555555555 455555554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.3e-10  Score=75.79  Aligned_cols=41  Identities=24%  Similarity=0.466  Sum_probs=20.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            34444555555555555555555555555544 344555554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.2e-10  Score=75.90  Aligned_cols=41  Identities=24%  Similarity=0.387  Sum_probs=22.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|.....|..|+++ .++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            44455555555555555555555555555555 455555555

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.7e-10  Score=75.33  Aligned_cols=41  Identities=27%  Similarity=0.456  Sum_probs=24.0

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            34555556666666666666666666666555 455566655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.6e-10  Score=75.20  Aligned_cols=41  Identities=27%  Similarity=0.434  Sum_probs=24.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            45555666666666666666666666666655 455666665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.7e-10  Score=75.58  Aligned_cols=41  Identities=29%  Similarity=0.428  Sum_probs=21.9

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            34455555555555555555555555555555 455555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.1e-10  Score=74.97  Aligned_cols=41  Identities=24%  Similarity=0.465  Sum_probs=25.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45556666666666666666666666666666 456666665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.3e-10  Score=75.34  Aligned_cols=41  Identities=27%  Similarity=0.464  Sum_probs=23.7

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555556666666666665666666555 455555555

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.2e-10  Score=75.37  Aligned_cols=41  Identities=24%  Similarity=0.466  Sum_probs=20.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            34445555555555555555555555555554 345555554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=4.7e-10  Score=75.60  Aligned_cols=41  Identities=32%  Similarity=0.498  Sum_probs=21.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34445555555555555555555555555555 455555554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.5e-10  Score=75.70  Aligned_cols=41  Identities=27%  Similarity=0.418  Sum_probs=20.7

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            34445555555555555555555555555544 345555554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.86  E-value=5.1e-10  Score=75.35  Aligned_cols=41  Identities=27%  Similarity=0.425  Sum_probs=24.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            45556666666666666666666666666655 455666665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.9e-10  Score=75.52  Aligned_cols=41  Identities=29%  Similarity=0.464  Sum_probs=20.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            34444555555555555555555555555554 344555554

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.85  E-value=2.9e-09  Score=78.79  Aligned_cols=56  Identities=27%  Similarity=0.631  Sum_probs=45.1

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc--CccccCChhHHHHHHhh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK--CSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~--C~k~F~~~~~L~~H~~~  103 (391)
                      ..++|.|.+.+|     ++.|.....|..|+++|+++++|+|.+  |++.|..+..|..|+++
T Consensus        14 ~~~~~~C~~~~C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           14 RIRSHICSHPGC-----GKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCEECSSTTT-----CCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             ccCceeCCCCCC-----ccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            567888876567     888888888888888888888888864  88888888888888764

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=4.8e-10  Score=75.47  Aligned_cols=41  Identities=27%  Similarity=0.442  Sum_probs=23.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|.....|..|+++ .+++||+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555555665566666555555555555 455555555

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.5e-09  Score=79.16  Aligned_cols=52  Identities=21%  Similarity=0.470  Sum_probs=48.7

Q ss_pred             cCCCCccCCcCccccCChhHHHHHHhhcCCCceecC--CCCcccChhHHHHHHHH
Q 016352           77 HGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD--CGTIFSRRDSFITHRAF  129 (391)
Q Consensus        77 ~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~--C~k~F~~~~~L~~H~~~  129 (391)
                      .+++||.|+.|++.|. ...|..|+++++++||.|+  |++.|..++.|..|+++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~   59 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKD   59 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHh
Confidence            4678999999999999 9999999988889999997  99999999999999974

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6e-10  Score=75.08  Aligned_cols=42  Identities=31%  Similarity=0.540  Sum_probs=28.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+ |
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666777777777777777777777666 566667666 5

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.2e-10  Score=75.85  Aligned_cols=41  Identities=29%  Similarity=0.478  Sum_probs=25.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            45556666666666666666666666666666 466666665

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.4e-10  Score=75.23  Aligned_cols=41  Identities=29%  Similarity=0.417  Sum_probs=26.3

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45566666666666666666666666666666 466666665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=6.4e-10  Score=74.93  Aligned_cols=40  Identities=33%  Similarity=0.536  Sum_probs=20.6

Q ss_pred             HHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           73 FSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        73 ~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      +++|++++||.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            4 GSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             SSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            3445555555555555555555555555555 345555554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=6.6e-10  Score=74.86  Aligned_cols=40  Identities=20%  Similarity=0.251  Sum_probs=19.7

Q ss_pred             HHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           73 FSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        73 ~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      +++|+++++|+|++|++.|..+..|..|+++ .+++||+|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            4 GSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             SCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             ccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444444555555555555555555555444 344455544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.84  E-value=2.5e-09  Score=79.12  Aligned_cols=57  Identities=19%  Similarity=0.520  Sum_probs=51.5

Q ss_pred             CCCceeccc--cccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHh
Q 016352            2 ATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRK   76 (391)
Q Consensus         2 g~kpf~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H   76 (391)
                      ..++|.|.+  |++.|.....|.+|++.|+             ++++|+|.+..|     ++.|.....|..|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~~~C-----~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHT-------------GEKPFSCSWKGC-----ERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHS-------------SSCSEECCCTTC-----CCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcC-------------CCCCccCCCCCC-----CcccCCHHHHHhHhhcC
Confidence            578999999  9999999999999999998             889999963239     99999999999999875

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=5.5e-10  Score=75.31  Aligned_cols=41  Identities=20%  Similarity=0.400  Sum_probs=23.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555555555555555555555555555555 455555555

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=7.9e-10  Score=74.67  Aligned_cols=42  Identities=21%  Similarity=0.337  Sum_probs=27.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHh-h-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSK-T-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~-~-~gek~~~C~-C  113 (391)
                      |+++|+++++|.|++|++.|..+..|..|++ + .+++||.|+ |
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4556666666666666666666666666666 5 466666666 5

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.3e-10  Score=75.33  Aligned_cols=41  Identities=34%  Similarity=0.538  Sum_probs=21.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            34445555555555555555555555555555 445555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.83  E-value=8.1e-10  Score=74.49  Aligned_cols=40  Identities=20%  Similarity=0.321  Sum_probs=19.8

Q ss_pred             HHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           73 FSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        73 ~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      +++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3444445555555555555555555555444 344555554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.9e-10  Score=75.10  Aligned_cols=40  Identities=33%  Similarity=0.509  Sum_probs=19.1

Q ss_pred             HHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           73 FSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        73 ~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      +++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            4 GSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            3444444444444444444444444444444 344444444

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=7.4e-10  Score=74.61  Aligned_cols=41  Identities=29%  Similarity=0.484  Sum_probs=25.3

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            45556666666666666666666666666666 456666665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.8e-10  Score=75.54  Aligned_cols=42  Identities=29%  Similarity=0.461  Sum_probs=27.5

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||+|+ |
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666 466666666 5

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8.5e-10  Score=74.39  Aligned_cols=38  Identities=21%  Similarity=0.304  Sum_probs=21.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            9 GEKPYKCVE--C-----GKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             SCCSEECSS--S-----CCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCeECcc--c-----CchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            455555555  5     5555555555555555555555555554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.80  E-value=1.7e-09  Score=72.85  Aligned_cols=38  Identities=26%  Similarity=0.431  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            9 GEKPYECKE--C-----GKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSCBCSS--S-----CCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCceECCC--C-----CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=72.74  Aligned_cols=38  Identities=18%  Similarity=0.341  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            9 GEKPYECSV--C-----GKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSS--S-----CCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCeeCCC--c-----CCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.2e-09  Score=73.68  Aligned_cols=41  Identities=27%  Similarity=0.447  Sum_probs=20.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444555555555555555555555555554 344555554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.6e-09  Score=71.78  Aligned_cols=38  Identities=21%  Similarity=0.279  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            9 GERPHKCNE--C-----GKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCeeCCC--C-----ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.5e-09  Score=71.20  Aligned_cols=42  Identities=26%  Similarity=0.350  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .++++|.|+ |
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56789999999999999999999999999999 799999998 7

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.78  E-value=2.7e-09  Score=71.74  Aligned_cols=38  Identities=21%  Similarity=0.396  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            9 GEKRYKCNE--C-----GKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TSCCEECSS--S-----CCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCcCcCCCC--C-----cchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.78  E-value=1.9e-10  Score=83.25  Aligned_cols=51  Identities=18%  Similarity=0.323  Sum_probs=35.3

Q ss_pred             HHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChhHH
Q 016352           70 KKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRDSF  123 (391)
Q Consensus        70 ~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~~L  123 (391)
                      ..|+++|++++||.|+.|++.|.....|.   ++ .+++||.|. |++.|....++
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            34666777777777777777777766665   44 467777777 77777766543

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.78  E-value=1.4e-09  Score=71.69  Aligned_cols=41  Identities=22%  Similarity=0.481  Sum_probs=26.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ +++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            34556666666666666666666666666666 566666663

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=5.5e-09  Score=73.08  Aligned_cols=45  Identities=16%  Similarity=0.400  Sum_probs=36.2

Q ss_pred             cCCceeecCCCCCCCCCCCCccCCHHHHHHHHH-HhcCCCCccCCcCccccCC
Q 016352           42 IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFS-RKHGEKKWKCEKCSKKYAV   93 (391)
Q Consensus        42 ~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~-~H~~ekp~~C~~C~k~F~~   93 (391)
                      .++++|.|++  |     ++.|.....|..|++ +|+++++|+|++|++.|.+
T Consensus         8 ~~~k~~~C~~--C-----~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQS--C-----GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CSSCCEECSS--S-----CCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCeECCC--C-----CcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3677888888  8     888888888888876 7888888888888888865

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.8e-09  Score=71.72  Aligned_cols=38  Identities=24%  Similarity=0.415  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            9 GVKPYMCNE--C-----GKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCcCeECCC--C-----CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.1e-09  Score=71.49  Aligned_cols=38  Identities=21%  Similarity=0.364  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            9 GEKPYKCSE--C-----GKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcCeECCC--C-----CCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.8e-09  Score=70.99  Aligned_cols=41  Identities=20%  Similarity=0.352  Sum_probs=28.9

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|++++||+|++|++.|..+..|..|+++ .++++|+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44567777777777777777777777777777 567777763

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.4e-09  Score=72.02  Aligned_cols=38  Identities=21%  Similarity=0.373  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            9 GEKPYKCNE--C-----GKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSEECSS--S-----CCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCeECCC--C-----CchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.3e-09  Score=72.15  Aligned_cols=38  Identities=21%  Similarity=0.348  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            9 GGKHFECTE--C-----GKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSS--S-----CCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCeECCC--C-----CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.8e-09  Score=71.67  Aligned_cols=38  Identities=21%  Similarity=0.437  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNE--C-----GKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSS--S-----CCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCc--C-----CCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.9e-09  Score=71.61  Aligned_cols=38  Identities=29%  Similarity=0.483  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            9 GERPYICTV--C-----GKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECTT--T-----CCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCcCCCC--C-----CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.1e-09  Score=71.44  Aligned_cols=38  Identities=24%  Similarity=0.352  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            9 GENPYECHE--C-----GKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSS--S-----CCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCcCcCCCC--C-----CcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.6e-09  Score=71.82  Aligned_cols=38  Identities=21%  Similarity=0.367  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            9 GEKPYKCHE--C-----GKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCEECTT--T-----CCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCeECCC--C-----CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.7e-09  Score=71.10  Aligned_cols=38  Identities=21%  Similarity=0.357  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||.|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            9 GEKPYICAE--C-----GKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSS--S-----CCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCcCeECCC--C-----ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=5.3e-09  Score=73.17  Aligned_cols=45  Identities=24%  Similarity=0.514  Sum_probs=41.5

Q ss_pred             CCCCceeccccccccCChhhHHHHHH-hcCCCcccccccccccCCceeecCCCCCCCCCCCCccCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGD   65 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~   65 (391)
                      ++++||.|++|++.|.....|.+|++ +|+             ++++|+|++  |     ++.|.+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~-------------~~k~~~C~~--C-----~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHT-------------SERPHKCQV--W-----VSGPSS   53 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSC-------------CCCCCCSSS--S-----CCSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcC-------------CCCCccCCC--C-----CCCCCC
Confidence            47899999999999999999999997 897             889999999  9     999975

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.5e-09  Score=71.91  Aligned_cols=38  Identities=24%  Similarity=0.412  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            9 GKKPYKCNE--C-----GKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCBCTT--T-----CCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCeECCC--C-----CCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.7e-09  Score=71.70  Aligned_cols=38  Identities=24%  Similarity=0.415  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            9 GEKLYNCKE--C-----GKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCBTT--T-----TBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCeECCC--C-----CCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.6e-09  Score=71.75  Aligned_cols=38  Identities=18%  Similarity=0.330  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            9 GEKPYKCNE--C-----GKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSSEETT--T-----TEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCeECCC--c-----ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.8e-09  Score=71.72  Aligned_cols=38  Identities=21%  Similarity=0.319  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            9 GEKPYKCEE--C-----GKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCcCccCCC--c-----cchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.7e-09  Score=71.79  Aligned_cols=38  Identities=24%  Similarity=0.461  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            9 GEKPFDCID--C-----GKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCTT--T-----CCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCeECCC--C-----CceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.4e-09  Score=71.17  Aligned_cols=38  Identities=16%  Similarity=0.361  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            9 GEKPYKCSD--C-----GKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SCCSCBCSS--S-----CCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCccCCc--c-----ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.3e-09  Score=71.34  Aligned_cols=38  Identities=18%  Similarity=0.340  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            9 GEKPYECSI--C-----GKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCcCcCCCC--C-----CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.3e-09  Score=71.40  Aligned_cols=38  Identities=26%  Similarity=0.480  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|+++++|+|+.|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            9 GERPYGCNE--C-----GKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCEECSS--S-----CCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCEEccc--c-----CcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3e-09  Score=71.61  Aligned_cols=38  Identities=24%  Similarity=0.407  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            9 GEKPYGCSE--C-----GKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCBCSS--S-----CCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCcCCCc--c-----ChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.7e-09  Score=71.04  Aligned_cols=38  Identities=26%  Similarity=0.425  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            9 GEKPYVCDY--C-----GKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCeECCC--C-----ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.3e-09  Score=71.36  Aligned_cols=38  Identities=13%  Similarity=0.271  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||.|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            9 GEKPFKCDI--C-----GKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCSS--S-----CCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCcCCCc--C-----CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.9e-09  Score=71.65  Aligned_cols=38  Identities=18%  Similarity=0.342  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            9 VEKPYKCED--C-----GKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSSCBCSS--S-----CCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCeeCcc--c-----CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4e-09  Score=70.90  Aligned_cols=38  Identities=18%  Similarity=0.285  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            9 REKSHQCRE--C-----GEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCCEECTT--T-----CCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCEEccc--c-----ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.75  E-value=2.8e-09  Score=71.71  Aligned_cols=38  Identities=18%  Similarity=0.364  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            9 GEKTWKCRE--C-----DMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSS--S-----CCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCeECCC--C-----CcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.75  E-value=2.5e-09  Score=72.00  Aligned_cols=38  Identities=18%  Similarity=0.392  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            9 GEKPFKCVE--C-----GKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCSS--S-----CCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCcccCc--c-----CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.2e-09  Score=71.53  Aligned_cols=38  Identities=24%  Similarity=0.459  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            9 GEKPYKCME--C-----GKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCSSSBTT--T-----TBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCC--C-----CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.75  E-value=3.2e-09  Score=71.30  Aligned_cols=38  Identities=24%  Similarity=0.354  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            9 GEKPYNCKE--C-----GKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCcCeECCc--c-----ccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.7e-09  Score=71.07  Aligned_cols=38  Identities=18%  Similarity=0.297  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            9 GEKPFKCEE--C-----GKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCcCCCC--C-----CCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.75  E-value=2.8e-09  Score=71.65  Aligned_cols=38  Identities=18%  Similarity=0.271  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            9 GVKPYGCSQ--C-----AKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----SCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCceECCC--C-----CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.2e-09  Score=71.31  Aligned_cols=38  Identities=16%  Similarity=0.210  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            9 GEKPHECRE--C-----GKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCBCTT--T-----CCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCeeCCC--C-----CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.5e-09  Score=71.23  Aligned_cols=38  Identities=21%  Similarity=0.376  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNE--C-----GKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETT--T-----TEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCcCeECCC--C-----CcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.4e-09  Score=71.19  Aligned_cols=38  Identities=18%  Similarity=0.315  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|+.|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            9 GEKSHTCDE--C-----GKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCSSEECTT--T-----CCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCeECCC--c-----CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.2e-09  Score=71.46  Aligned_cols=38  Identities=21%  Similarity=0.298  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            9 STKSHQCHE--C-----GRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSEECSS--S-----CCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCeECCc--C-----CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.4e-09  Score=72.05  Aligned_cols=41  Identities=29%  Similarity=0.440  Sum_probs=28.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            55667777777777777777777777777776 566777764

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.5e-09  Score=71.97  Aligned_cols=41  Identities=24%  Similarity=0.450  Sum_probs=30.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            56677777777777777777777777777777 567777774

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.8e-09  Score=71.81  Aligned_cols=41  Identities=24%  Similarity=0.447  Sum_probs=32.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .++++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            56777888888888888888888888888877 677788774

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=4.4e-09  Score=70.77  Aligned_cols=42  Identities=31%  Similarity=0.437  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .++++|.|+ |
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            57789999999999999999999999999999 799999998 7

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.2e-09  Score=71.33  Aligned_cols=38  Identities=24%  Similarity=0.446  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            9 GEKPYKCNE--C-----GKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCTTCCTT--T-----CCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCcCCCC--C-----CCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999988

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.5e-09  Score=71.98  Aligned_cols=41  Identities=20%  Similarity=0.434  Sum_probs=28.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45666677777777777777777777777766 566777664

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3e-09  Score=71.54  Aligned_cols=38  Identities=16%  Similarity=0.338  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            9 GEKPYKCEK--C-----GKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SCCSEEETT--T-----TEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCeECCC--C-----CCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.3e-09  Score=71.21  Aligned_cols=41  Identities=24%  Similarity=0.400  Sum_probs=32.0

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            56777788888888888888888888888877 577788774

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.5e-09  Score=71.92  Aligned_cols=41  Identities=22%  Similarity=0.408  Sum_probs=26.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ ++++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45566666666666666666666666666666 466666664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.2e-09  Score=72.34  Aligned_cols=41  Identities=22%  Similarity=0.451  Sum_probs=23.1

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            44555555555555555555555555555555 455555553

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.73  E-value=4.7e-09  Score=70.63  Aligned_cols=38  Identities=16%  Similarity=0.227  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            9 GVNPYKCSQ--C-----EKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----SCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCeECCC--C-----CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=4e-09  Score=70.92  Aligned_cols=38  Identities=18%  Similarity=0.362  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            9 GEKPFKCEE--C-----GKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEEETT--T-----TEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCeeCCC--C-----CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.8e-09  Score=71.59  Aligned_cols=41  Identities=24%  Similarity=0.464  Sum_probs=28.0

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            55666667777777777777777777777766 566677664

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.2e-09  Score=71.42  Aligned_cols=38  Identities=26%  Similarity=0.433  Sum_probs=36.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            9 GEKPYRCAE--C-----GKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCeECCC--C-----CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999876

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.2e-09  Score=72.28  Aligned_cols=41  Identities=27%  Similarity=0.478  Sum_probs=25.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45556666666666666666666666666666 456666664

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.8e-09  Score=71.67  Aligned_cols=38  Identities=18%  Similarity=0.355  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            9 GEKPYKCNE--C-----GKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCSSEECSS--S-----CCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCeECCc--C-----CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            899999999  9     9999999999999999999999999988

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.6e-09  Score=71.84  Aligned_cols=41  Identities=29%  Similarity=0.451  Sum_probs=29.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            55667777777777777777777777777777 567777764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.4e-09  Score=72.05  Aligned_cols=41  Identities=24%  Similarity=0.460  Sum_probs=24.0

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            44555556666666666666666666666555 455566553

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.9e-09  Score=71.65  Aligned_cols=41  Identities=29%  Similarity=0.503  Sum_probs=28.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            55666677777777777777777777777666 566777664

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.4e-09  Score=71.91  Aligned_cols=41  Identities=32%  Similarity=0.509  Sum_probs=21.7

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            44455555555555555555555555555555 455555553

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.72  E-value=2.3e-09  Score=72.18  Aligned_cols=41  Identities=27%  Similarity=0.523  Sum_probs=21.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34455555555555555555555555555555 445555553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.6e-09  Score=71.86  Aligned_cols=41  Identities=29%  Similarity=0.495  Sum_probs=28.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            55666777777777777777777777777766 566777664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3e-09  Score=71.59  Aligned_cols=41  Identities=29%  Similarity=0.552  Sum_probs=29.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            55667777777777777777777777777777 567777764

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.9e-09  Score=70.88  Aligned_cols=38  Identities=16%  Similarity=0.201  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|+++++|+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            9 GEKPCKCTE--C-----GKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCeeCCC--C-----CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.6e-09  Score=70.96  Aligned_cols=41  Identities=27%  Similarity=0.521  Sum_probs=27.5

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|.....|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            55666666677777777777777777777666 566666663

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.7e-09  Score=71.73  Aligned_cols=41  Identities=32%  Similarity=0.502  Sum_probs=22.5

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44455555555555555555555555555555 455555553

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.8e-09  Score=71.84  Aligned_cols=41  Identities=29%  Similarity=0.478  Sum_probs=27.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            45566666667777777777777777777666 566666664

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.71  E-value=1.9e-09  Score=75.43  Aligned_cols=51  Identities=20%  Similarity=0.186  Sum_probs=45.6

Q ss_pred             CCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCcee
Q 016352           60 ARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYK  110 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~  110 (391)
                      ++.|.....|..|+++|+++++|.|++|++.|.....|..|+++ ++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            67788888889999999999999999999999999999999998 7888873

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.3e-09  Score=70.52  Aligned_cols=40  Identities=20%  Similarity=0.496  Sum_probs=32.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56778888888888888888888888888888 67888877

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.8e-09  Score=71.65  Aligned_cols=41  Identities=27%  Similarity=0.458  Sum_probs=25.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            45556666666666666666666666666666 456666664

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.8e-09  Score=71.65  Aligned_cols=41  Identities=29%  Similarity=0.511  Sum_probs=24.3

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555666666666666666666666666655 455666553

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=2.8e-09  Score=70.96  Aligned_cols=41  Identities=22%  Similarity=0.396  Sum_probs=30.9

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|++++||.|++|++.|.....|..|+++ +++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            56677777777777777777777777777777 577777773

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.5e-09  Score=71.30  Aligned_cols=41  Identities=27%  Similarity=0.464  Sum_probs=24.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44555666666666666666666666666665 455666554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.4e-09  Score=72.11  Aligned_cols=41  Identities=27%  Similarity=0.501  Sum_probs=23.3

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|++++||+|++|++.|..+..|..|+++ .++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            44555555555555555555555555555555 455555553

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.8e-09  Score=71.62  Aligned_cols=41  Identities=29%  Similarity=0.508  Sum_probs=21.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            44455555555555555555555555555555 455555553

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.4e-09  Score=72.13  Aligned_cols=41  Identities=20%  Similarity=0.350  Sum_probs=24.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ +++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44555666666666666666666666666655 455666554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=7.5e-09  Score=69.59  Aligned_cols=38  Identities=21%  Similarity=0.394  Sum_probs=36.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            9 GEKPFKCKE--C-----GKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCEECCc--C-----CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999876

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.8e-09  Score=71.58  Aligned_cols=41  Identities=27%  Similarity=0.511  Sum_probs=24.7

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44556666666666666666666666666655 455666654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.9e-09  Score=71.02  Aligned_cols=38  Identities=18%  Similarity=0.392  Sum_probs=19.4

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSE--C-----GKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSS--S-----CCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCC--C-----CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            444555555  5     5555555555555555555555555444

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.3e-09  Score=70.60  Aligned_cols=40  Identities=25%  Similarity=0.484  Sum_probs=25.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      |+++|++++||+|++|++.|..+..|..|+++ .+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            34556666666666666666666666666666 56666665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=9.9e-09  Score=69.79  Aligned_cols=39  Identities=26%  Similarity=0.497  Sum_probs=36.8

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSC   54 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C   54 (391)
                      ++++||.|++|++.|.....|.+|+++|+             ++++|+|++  |
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~--C   46 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSSGP--S   46 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSC-------------SCCCCCSCC--C
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcC-------------CCCCccCCC--C
Confidence            36899999999999999999999999998             899999999  8

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=8.3e-09  Score=69.05  Aligned_cols=39  Identities=21%  Similarity=0.494  Sum_probs=37.1

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSC   54 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C   54 (391)
                      ++++||+|++|++.|..+..|.+|+++|+             ++++|.|+.  |
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~-------------~~~~~~C~~--c   44 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHVRSHD-------------GSVGKSGPS--S   44 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHHHHHS-------------CCCCCCCCC--C
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHHHHcc-------------CCCCCCCcC--C
Confidence            57899999999999999999999999998             899999999  7

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=2.7e-09  Score=70.33  Aligned_cols=40  Identities=23%  Similarity=0.441  Sum_probs=28.9

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      |+++|++++||.|++|++.|..+..|..|+++ .+++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45567777777777777777777777777777 56777766

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.70  E-value=3.1e-09  Score=69.84  Aligned_cols=40  Identities=15%  Similarity=0.386  Sum_probs=24.3

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34455666666666666666666666666666 45666655

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.6e-09  Score=71.19  Aligned_cols=41  Identities=24%  Similarity=0.478  Sum_probs=30.9

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|..+..|..|+++ ++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45667777778888888888877788888777 577777775

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3e-09  Score=71.54  Aligned_cols=38  Identities=18%  Similarity=0.361  Sum_probs=37.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            9 GEKPFKCGE--C-----GKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSEECTT--T-----CCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCeECCC--C-----CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.4e-09  Score=71.17  Aligned_cols=41  Identities=29%  Similarity=0.523  Sum_probs=30.4

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|.|++|++.|..+..|..|+++ .+++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56677777777777777777777777777777 577777774

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1e-08  Score=68.86  Aligned_cols=38  Identities=21%  Similarity=0.510  Sum_probs=36.0

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPE   51 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~   51 (391)
                      ++++||+|++|++.|.....|.+|++.|+             ++++|+|++
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (46)
T 2ep0_A            8 TGEKPYKCDVCHKSFRYGSSLTVHQRIHT-------------GEKPSGPSS   45 (46)
T ss_dssp             TTCCSEECSSSCCEESSHHHHHHHHTTTS-------------SSCCCSCCC
T ss_pred             CCCCCeeCcccCcccCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            47899999999999999999999999998             889999998

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6.5e-09  Score=70.05  Aligned_cols=38  Identities=29%  Similarity=0.455  Sum_probs=36.9

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHH-HhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFS-RKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~-~H~~ekp~~C~~C   87 (391)
                      ++++|.|++  |     ++.|.....|..|++ +|++++||+|++|
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            9 GKKPYECIE--C-----GKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCSBCCSS--S-----CCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCEECCc--c-----CchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            889999999  9     999999999999999 9999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3.5e-09  Score=71.27  Aligned_cols=41  Identities=24%  Similarity=0.417  Sum_probs=27.7

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|+++++|+|++|++.|.....|..|+++ .++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            45666666777777777777777777777666 566666664

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=5.6e-09  Score=69.55  Aligned_cols=40  Identities=18%  Similarity=0.234  Sum_probs=24.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      |+++|+++++|.|++|++.|.....|..|+++ .+++||+|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34556666666666666666666666666666 45666666

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=3.8e-09  Score=70.29  Aligned_cols=40  Identities=23%  Similarity=0.445  Sum_probs=24.9

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      |+++|+++++|.|++|++.|.....|..|+++ .+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            45556666666666666666666666666666 45666665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.3e-08  Score=69.13  Aligned_cols=40  Identities=20%  Similarity=0.443  Sum_probs=34.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCcc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSK   89 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k   89 (391)
                      .+++|.|++  |     ++.|.....|..|+++|++++||+|++|+|
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEI--C-----GKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETT--T-----TEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCcCeeCCC--C-----CcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            678888888  8     888888888888888888888888888875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=3.3e-09  Score=71.36  Aligned_cols=41  Identities=20%  Similarity=0.321  Sum_probs=28.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~  112 (391)
                      |+++|++++||.|++|++.|..+..|..|+++ .++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            55667777777777777777777777777766 566777764

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=4.6e-09  Score=70.66  Aligned_cols=41  Identities=24%  Similarity=0.376  Sum_probs=25.8

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cC-CCceecC
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CG-TKEYKCD  112 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~g-ek~~~C~  112 (391)
                      |+++|++++||.|++|++.|.....|..|+++ .+ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45566666666666666666666666666666 45 5666663

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7e-09  Score=69.11  Aligned_cols=40  Identities=28%  Similarity=0.462  Sum_probs=28.2

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      |+++|+++++|.|++|++.|.....|..|+++ ++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            55667777777777777777777777777776 56677665

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.62  E-value=1.7e-08  Score=66.85  Aligned_cols=38  Identities=16%  Similarity=0.350  Sum_probs=35.3

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPE   51 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~   51 (391)
                      ++++||.|+.|++.|.....|.+|+++|+             ++++|+|++
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~   43 (43)
T 2yrm_A            6 SGNGAFFCNECDCRFSEEASLKRHTLQTH-------------SDKSGPSSG   43 (43)
T ss_dssp             SSSCCBCCSSSCCCBSSHHHHHHHHHHHT-------------CTTCSSSCC
T ss_pred             CCCCCEECCCCCCeeCChHHHHHHHHhhC-------------CCCCccCCC
Confidence            47899999999999999999999999998             889999974

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.61  E-value=1.7e-09  Score=78.14  Aligned_cols=46  Identities=15%  Similarity=0.391  Sum_probs=41.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHH
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWK   98 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~   98 (391)
                      ++++|.|+.  |     ++.|.....|.   ++|++++||+|++|++.|....++.
T Consensus        11 ~~k~~~C~~--C-----~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A           11 NRASFKCPV--C-----SSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             SSSEEECSS--S-----CCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             CCCCccCCC--C-----CchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            899999999  9     99999988886   8999999999999999998876654

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=4.1e-09  Score=70.16  Aligned_cols=40  Identities=18%  Similarity=0.285  Sum_probs=30.0

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      |+++|+++++|.|++|++.|.....|..|+++ ++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            56677777777777777777777777777777 57777776

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=2e-08  Score=67.07  Aligned_cols=38  Identities=26%  Similarity=0.457  Sum_probs=35.1

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPE   51 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~   51 (391)
                      ++++||+|++|++.|.....|..|+++|+             ++++|.|+.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (45)
T 2epu_A            8 TGQKPFECTHCGKSFRAKGNLVTHQRIHT-------------GEKSGPSSG   45 (45)
T ss_dssp             CSCCSEEETTTTEEESSHHHHHHHHTTTS-------------SCCCCCSCC
T ss_pred             CCCcCccCCCCCCccCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            47899999999999999999999999998             889999963

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.8e-08  Score=67.68  Aligned_cols=37  Identities=27%  Similarity=0.414  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            9 GQRPYECIE--C-----GKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSEECSS--S-----CCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCcCcCCCC--C-----CCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.60  E-value=1.9e-08  Score=67.56  Aligned_cols=37  Identities=19%  Similarity=0.377  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            9 GEKPFECAE--C-----GKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSS--S-----SCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCEECCC--C-----CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=2.1e-08  Score=67.23  Aligned_cols=37  Identities=24%  Similarity=0.406  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            9 GEKPYNCEE--C-----GKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECTT--T-----CCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCccCCC--C-----CCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999975

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.2e-08  Score=67.11  Aligned_cols=37  Identities=24%  Similarity=0.447  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            9 GEKPYKCNE--C-----GKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECTT--S-----CCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCeeccc--c-----CChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.8e-08  Score=67.61  Aligned_cols=38  Identities=18%  Similarity=0.284  Sum_probs=29.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            9 GEKPYKCDV--C-----HKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCSEECSS--S-----CCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCeeCcc--c-----CcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            667777777  7     7777777777777777777777777766

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.4e-08  Score=67.01  Aligned_cols=37  Identities=22%  Similarity=0.413  Sum_probs=35.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~~~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            9 GEKPYECKV--C-----SKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSS--S-----CCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCcCeECCC--C-----CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999975

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=2.6e-08  Score=66.97  Aligned_cols=38  Identities=24%  Similarity=0.300  Sum_probs=35.4

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPE   51 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~   51 (391)
                      ++++||+|++|++.|.....|..|+++|+             ++++|+|++
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (46)
T 2eom_A            8 HGERGHRCSDCGKFFLQASNFIQHRRIHT-------------GEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSCCCCSSHHHHHHHHHHHS-------------SCCCSSCCC
T ss_pred             CCCCCcCCCCCCCeeCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            47899999999999999999999999998             889999975

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.58  E-value=2.4e-08  Score=65.52  Aligned_cols=36  Identities=22%  Similarity=0.403  Sum_probs=34.7

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|+|+
T Consensus         7 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            7 GENPYECSE--C-----GKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SCCSEECSS--S-----CCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCccCCC--c-----ChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            889999999  9     99999999999999999999999995

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=2e-08  Score=67.48  Aligned_cols=37  Identities=27%  Similarity=0.433  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||.|++
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            9 GERHYECSE--C-----GKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSS--S-----CCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CCCCeECCc--C-----CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.58  E-value=1.4e-08  Score=70.93  Aligned_cols=52  Identities=15%  Similarity=0.268  Sum_probs=48.5

Q ss_pred             ccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCcc
Q 016352           12 NKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWK   83 (391)
Q Consensus        12 ~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~   83 (391)
                      +|.|.....|..|++.|+             ++++|.|++  |     ++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~-------------~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQ-------------SEQPATCPI--C-----YAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHT-------------SSCCEECTT--T-----CCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcC-------------CCCCccCCC--C-----CcccCCHHHHHHHHHHhccCCCCC
Confidence            477889999999999998             899999999  9     999999999999999999999874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=4.3e-08  Score=65.47  Aligned_cols=39  Identities=15%  Similarity=0.324  Sum_probs=31.2

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCS   88 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~   88 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|.|++|+
T Consensus         7 ~~k~~~C~~--C-----~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            7 GEKPYSCPV--C-----GLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SCCSSEETT--T-----TEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCcCCC--C-----CcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            677888888  7     78888888888888888888888888775

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=2.9e-08  Score=64.84  Aligned_cols=36  Identities=25%  Similarity=0.459  Sum_probs=33.6

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeec
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVC   49 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C   49 (391)
                      +|++||+|++|++.|.....|..|+++|+             ++++|+|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C   41 (41)
T 2ept_A            6 SGQRVYECQECGKSFRQKGSLTLHERIHT-------------GSGPSSG   41 (41)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHGGGCC-------------CCSCSCC
T ss_pred             CCCCCeECCCCCCCcCCHHHHHHHHHHhC-------------CCCCcCC
Confidence            47899999999999999999999999998             7888887

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=2.5e-08  Score=66.86  Aligned_cols=37  Identities=27%  Similarity=0.426  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|+.
T Consensus         9 ~~~~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            9 GERHYECSE--C-----GKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCCCEECSS--S-----CCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCC--C-----CcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=2.2e-08  Score=67.18  Aligned_cols=37  Identities=19%  Similarity=0.401  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            9 GENPFICSE--C-----GKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCTT--T-----CCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCEECCc--c-----CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=2.2e-08  Score=67.23  Aligned_cols=37  Identities=22%  Similarity=0.412  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||.|++
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            9 GEKPYKCNE--C-----GKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCBCSS--S-----CCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCeECCC--C-----CcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            899999999  9     999999999999999999999999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=2.3e-08  Score=67.00  Aligned_cols=37  Identities=22%  Similarity=0.418  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            9 GEKPFECSE--C-----QKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCcCCCC--C-----CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999975

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=2.1e-08  Score=67.32  Aligned_cols=41  Identities=24%  Similarity=0.321  Sum_probs=38.5

Q ss_pred             HHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-C
Q 016352           73 FSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-C  113 (391)
Q Consensus        73 ~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C  113 (391)
                      +++|+++++|.|++|++.|..+..|..|+++ ++++||.|+ |
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4678999999999999999999999999999 799999998 7

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=2.3e-08  Score=65.33  Aligned_cols=37  Identities=16%  Similarity=0.516  Sum_probs=19.5

Q ss_pred             HhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceec
Q 016352           75 RKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKC  111 (391)
Q Consensus        75 ~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C  111 (391)
                      +|+++++|+|++|++.|..+..|..|+++ ++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            34455555555555555555555555555 45555554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=3e-08  Score=66.58  Aligned_cols=37  Identities=22%  Similarity=0.435  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            9 GKKLFKCNE--C-----KKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCBCTT--T-----CCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCEECCc--c-----CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=2.4e-08  Score=66.93  Aligned_cols=37  Identities=22%  Similarity=0.459  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            9 GEKPYICNE--C-----GKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSS--S-----CCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCcCEECCC--C-----ChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            889999999  9     999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=2.6e-08  Score=66.72  Aligned_cols=37  Identities=16%  Similarity=0.360  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            9 GEKPYECSD--C-----GKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             SCCSSCCSS--S-----CCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCcCCCC--C-----CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=3.2e-08  Score=64.87  Aligned_cols=36  Identities=17%  Similarity=0.326  Sum_probs=34.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|.|++  |     ++.|.....|..|+++|+++++|+|.
T Consensus         7 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            7 GEKPYSCAE--C-----KETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCCSCBCTT--T-----CCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCCeECCC--C-----CCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            889999999  9     99999999999999999999999984

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.7e-08  Score=66.82  Aligned_cols=37  Identities=22%  Similarity=0.434  Sum_probs=35.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|+|+.
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            9 GKKPYECKE--C-----RKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CSCSCCCSS--S-----CCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCC--c-----CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.7e-08  Score=66.68  Aligned_cols=37  Identities=24%  Similarity=0.459  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            9 GEKPYRCGE--C-----GKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSS--S-----CCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCeECCC--C-----CCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.4e-08  Score=67.01  Aligned_cols=37  Identities=24%  Similarity=0.460  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            9 GGKPYQCNE--C-----GKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSCSSSCCS--S-----CCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CCCCeECCC--C-----CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.1e-08  Score=67.30  Aligned_cols=37  Identities=16%  Similarity=0.273  Sum_probs=35.4

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|+++++|+|+.
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            9 GEKPYSCNV--C-----GKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCSEEETT--T-----TEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCeECcc--c-----ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            899999999  9     999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.6e-08  Score=66.89  Aligned_cols=37  Identities=19%  Similarity=0.410  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            9 GEKCYKCDV--C-----GKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBCSS--S-----CCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCCeECCC--C-----CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=3.4e-08  Score=66.27  Aligned_cols=37  Identities=22%  Similarity=0.512  Sum_probs=35.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|+.
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            9 GEKPYKCSD--C-----GKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             SCCCEECSS--S-----CCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CCCCEECcc--c-----CCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999973

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.7e-08  Score=66.81  Aligned_cols=37  Identities=19%  Similarity=0.388  Sum_probs=35.4

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            9 GEKPFQCEE--C-----GKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSBCCSS--S-----CCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCcCCCCCC--C-----CcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.4e-08  Score=67.10  Aligned_cols=37  Identities=22%  Similarity=0.397  Sum_probs=35.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||.|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            9 GEKPYKCQV--C-----GKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCSS--S-----CCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCcccCCCC--C-----CcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.3e-08  Score=67.05  Aligned_cols=37  Identities=22%  Similarity=0.424  Sum_probs=35.4

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||.|++
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            9 GEKPYKCNE--C-----GKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTCCSS--S-----CCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCeECCC--C-----CcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=4.4e-09  Score=79.29  Aligned_cols=61  Identities=23%  Similarity=0.470  Sum_probs=50.9

Q ss_pred             HHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhhcCCCceecC-CCCcccChhHHHHHHHHh
Q 016352           68 GIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus        68 ~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~gek~~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      .|..|+++|.+++++.|..|++.|. ...|..|+...+++||.|+ |++.|. ...|..|+++|
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c   65 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVC   65 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHB
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHc
Confidence            4567888889999999999999994 8899999833889999999 999887 48888898754

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.7e-08  Score=66.71  Aligned_cols=37  Identities=24%  Similarity=0.434  Sum_probs=35.4

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|+.
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            9 GEKPYKCNE--C-----GKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCTT--T-----TCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CCCCeECCc--C-----ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=4e-08  Score=65.06  Aligned_cols=36  Identities=22%  Similarity=0.431  Sum_probs=34.7

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|+
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            9 GEKPYECNE--C-----QKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSEECTT--T-----CCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCeECCC--C-----CcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            889999999  9     99999999999999999999999995

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3.6e-08  Score=66.59  Aligned_cols=38  Identities=13%  Similarity=0.288  Sum_probs=29.5

Q ss_pred             CCceeecC--CCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           43 RKRVYVCP--EPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        43 ~~~~~~C~--~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      ++++|+|.  .  |     ++.|.....|..|+++|++++||+|++|
T Consensus         9 ~~k~~~C~~~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            9 GEKPFACTWPG--C-----GWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCEECCSSS--C-----CCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCeECCCCC--C-----CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67778886  5  7     7788887788888877877778887776

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3e-08  Score=66.60  Aligned_cols=37  Identities=22%  Similarity=0.434  Sum_probs=35.4

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|.|+.
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            9 GERPFKCNE--C-----GKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCCCSS--S-----CCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCeECCC--C-----CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.5e-08  Score=65.34  Aligned_cols=36  Identities=25%  Similarity=0.407  Sum_probs=34.7

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|+
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            9 GMKPYVCNE--C-----GKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSCCTT--T-----CCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCeECCC--C-----CCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            889999999  9     99999999999999999999999995

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.2e-08  Score=65.59  Aligned_cols=36  Identities=17%  Similarity=0.344  Sum_probs=34.7

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|+|+
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            9 GENPYECCE--C-----GKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSCEETT--T-----TEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCcCeeCCC--C-----CCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            889999999  9     99999999999999999999999995

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=7e-08  Score=65.14  Aligned_cols=38  Identities=26%  Similarity=0.444  Sum_probs=35.8

Q ss_pred             CCCCceecc--ccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCC
Q 016352            1 MATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPE   51 (391)
Q Consensus         1 ~g~kpf~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~   51 (391)
                      ++++||+|.  .|++.|.....|.+|+++|+             ++++|+|.+
T Consensus         8 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~   47 (48)
T 2ent_A            8 TGEKPFACTWPGCGWRFSRSDELSRHRRSHS-------------GVKPSGPSS   47 (48)
T ss_dssp             CCCCCEECCSSSCCCEESSHHHHHHHHTTSC-------------CCCSCSSCC
T ss_pred             CCCCCeECCCCCCCCccCCHHHHHHHHHHhC-------------CCCCCCCCC
Confidence            478999998  89999999999999999998             889999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.49  E-value=5.4e-08  Score=63.74  Aligned_cols=35  Identities=11%  Similarity=0.260  Sum_probs=34.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C   84 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|
T Consensus         8 ~~~~~~C~~--C-----~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQ--C-----GKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSS--S-----CCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCeECCC--C-----CcccCCHHHHHHHhhhcCCCCCCCC
Confidence            889999999  9     9999999999999999999999998

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=4.8e-08  Score=64.80  Aligned_cols=36  Identities=11%  Similarity=0.268  Sum_probs=34.7

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|+
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            9 TRKRYECSK--C-----QATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSSEECTT--T-----CCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCCCeECCC--C-----CCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            889999999  9     99999999999999999999999995

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=4.1e-08  Score=64.36  Aligned_cols=35  Identities=14%  Similarity=0.348  Sum_probs=34.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C   84 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||.|
T Consensus         8 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            8 GEKPYKCET--C-----GARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SSCSEECTT--T-----CCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCCEeCCC--c-----ChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            889999999  9     9999999999999999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=6.3e-08  Score=64.29  Aligned_cols=36  Identities=19%  Similarity=0.292  Sum_probs=34.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|+
T Consensus         9 ~~~~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            9 AKTTSECQE--C-----GKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SSCCCCCTT--T-----CCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCcCeECCC--C-----CcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            889999999  9     99999999999999999999999995

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=4.6e-08  Score=64.88  Aligned_cols=36  Identities=11%  Similarity=0.233  Sum_probs=34.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|+|.
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            9 GENPFKCSK--C-----DRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCCSEECSS--S-----SCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCCCeECCC--C-----CchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            889999999  9     99999999999999999999999994

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=3.7e-08  Score=66.10  Aligned_cols=37  Identities=11%  Similarity=0.263  Sum_probs=35.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC-CCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG-EKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~-ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++ ++||+|++
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            9 KEKCFKCNK--C-----EKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CSCCEECSS--S-----CCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCCCEECcC--C-----CCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            889999999  9     9999999999999999999 99999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=4.3e-08  Score=64.34  Aligned_cols=35  Identities=20%  Similarity=0.407  Sum_probs=34.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C   84 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|
T Consensus         8 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            8 GEKPYPCEI--C-----GTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSCCBCCSS--S-----CCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCEECCC--C-----CCccCCHHHHHHHHHhcCCCCCCCC
Confidence            889999999  9     9999999999999999999999998

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=4.8e-08  Score=65.39  Aligned_cols=37  Identities=19%  Similarity=0.399  Sum_probs=35.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|+.
T Consensus         9 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            9 GEKPYECNQ--C-----GKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSEETT--T-----TEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCeECCC--C-----ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.4e-08  Score=65.74  Aligned_cols=37  Identities=22%  Similarity=0.410  Sum_probs=35.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|+.
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            9 GEKPYECDV--C-----RKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSSSCBCTT--T-----CCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCC--c-----CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999  9     999999999999999999999999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=3.8e-08  Score=64.46  Aligned_cols=35  Identities=17%  Similarity=0.392  Sum_probs=34.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C   84 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|
T Consensus         8 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            8 GEKPYRCDQ--C-----GKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             SCCSBCCTT--T-----TCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCCeeCCC--c-----cchhCCHHHHHHHHHHhCCCCCCCC
Confidence            899999999  9     9999999999999999999999998

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.43  E-value=1.3e-07  Score=69.53  Aligned_cols=38  Identities=26%  Similarity=0.342  Sum_probs=34.5

Q ss_pred             CCCCceeccc--cccccCChhhHHHHH-HhcCCCcccccccccccCCceeecCC
Q 016352            1 MATNRFVCEI--CNKGFQRDQNLQLHR-RGHNLPWKLRQRSTTEIRKRVYVCPE   51 (391)
Q Consensus         1 ~g~kpf~C~~--C~k~F~~~~~L~~H~-~~H~~~~~~~~~~~~~~~~~~~~C~~   51 (391)
                      +|+|||+|.+  |+|.|.+..+|.+|+ ++|+             +++||.|.+
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT-------------gEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK-------------SDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS-------------SCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCC-------------CCCCccccc
Confidence            5899999975  999999999999997 6898             899999876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=4.9e-08  Score=65.45  Aligned_cols=36  Identities=14%  Similarity=0.252  Sum_probs=34.8

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|+
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            9 GEKPFQCKE--C-----GMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSEECSS--S-----CCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCCeeCcc--c-----ChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            889999999  9     99999999999999999999999996

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.42  E-value=1.1e-07  Score=61.37  Aligned_cols=36  Identities=25%  Similarity=0.518  Sum_probs=32.7

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeec
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVC   49 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C   49 (391)
                      ++++||.|++|++.|.....|..|+++|+             ++++|.|
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHR-------------RDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTC-------------CSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcC-------------CCcccee
Confidence            58899999999999999999999999998             6777765

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.41  E-value=1.9e-07  Score=61.66  Aligned_cols=37  Identities=19%  Similarity=0.442  Sum_probs=28.7

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||+|++
T Consensus         7 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            7 GNGAFFCNE--C-----DCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SSCCBCCSS--S-----CCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCCCEECCC--C-----CCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            677788877  7     788888888888888888888887763

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=4.5e-08  Score=76.09  Aligned_cols=41  Identities=10%  Similarity=0.294  Sum_probs=25.8

Q ss_pred             HHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CC
Q 016352           74 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CG  114 (391)
Q Consensus        74 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~  114 (391)
                      ++|+++++|+|++|++.|.....|..|+++ .+++||+|. |.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            456666666666666666666666666666 456666665 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.6e-07  Score=63.00  Aligned_cols=36  Identities=19%  Similarity=0.279  Sum_probs=25.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|+
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            9 GERGHRCSD--C-----GKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCSS--S-----CCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCcCCCC--C-----CCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            566677777  6     67777777777777777777777765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=1.3e-07  Score=62.74  Aligned_cols=36  Identities=19%  Similarity=0.226  Sum_probs=34.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||.|.
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            9 GEKPYECNE--C-----GKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCSEECSS--S-----CCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcCeECCC--C-----CcccCchHHHHHHHhHhcCCCCCCCC
Confidence            899999999  9     99999999999999999999999873

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=6.6e-08  Score=64.13  Aligned_cols=36  Identities=17%  Similarity=0.361  Sum_probs=34.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||.|.
T Consensus         9 ~~~~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            9 DSKSYNCNE--C-----GKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCEEETT--T-----TEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCeECcc--c-----CcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            889999999  9     99999999999999999999999984

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=1.3e-07  Score=63.04  Aligned_cols=36  Identities=17%  Similarity=0.388  Sum_probs=26.4

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCE   85 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~   85 (391)
                      ++++|+|++  |     ++.|.....|..|+++|+++++|.|+
T Consensus         9 ~~k~~~C~~--C-----~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            9 GQKPFECTH--C-----GKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             SCCSEEETT--T-----TEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCcCccCCC--C-----CCccCChHHHHHHHHHhCCCCCCCCC
Confidence            667777777  7     77777777777777777777777775

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=3.8e-08  Score=74.08  Aligned_cols=63  Identities=24%  Similarity=0.464  Sum_probs=54.5

Q ss_pred             hhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHH
Q 016352           19 QNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWK   98 (391)
Q Consensus        19 ~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~   98 (391)
                      ..|..|++.|.             +++++.|+.  |     ++.|. ...|..|+ .|.+++|+.|+.|++.|. ...|.
T Consensus         3 ~~L~~H~~~~c-------------~~r~~~C~~--C-----~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~   59 (75)
T 2d9k_A            3 SGSSGHEETEC-------------PLRLAVCQH--C-----DLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLK   59 (75)
T ss_dssp             CCCSCCCCCCC-------------CCCCEECSS--S-----CCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGG
T ss_pred             hHHHhhCcccC-------------CCcccCCcc--c-----ChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHH
Confidence            34556666666             899999999  9     99994 99999999 899999999999999987 58999


Q ss_pred             HHHhhc
Q 016352           99 AHSKTC  104 (391)
Q Consensus        99 ~H~~~~  104 (391)
                      .|++++
T Consensus        60 ~H~~~c   65 (75)
T 2d9k_A           60 THPEVC   65 (75)
T ss_dssp             THHHHB
T ss_pred             HHHHHc
Confidence            999884

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.29  E-value=4.5e-07  Score=57.44  Aligned_cols=34  Identities=15%  Similarity=0.078  Sum_probs=31.2

Q ss_pred             ccccCCCCCCccCCccccccCCchhHHhhhhccC
Q 016352          174 HELMPMPPKPFNTMAAASIFESSNNNLQQSAAAS  207 (391)
Q Consensus       174 H~~~htg~kp~~C~~C~~~F~~~~~L~~H~~~~~  207 (391)
                      |+++|++++||+|+.|++.|.....|.+|++...
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            7889999999999999999999999999987653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.25  E-value=6.8e-07  Score=55.66  Aligned_cols=29  Identities=28%  Similarity=0.555  Sum_probs=27.7

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +|++||.|.+|++.|.....|..|++.|+
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            58899999999999999999999999997

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.23  E-value=7.5e-07  Score=55.61  Aligned_cols=29  Identities=31%  Similarity=0.583  Sum_probs=27.7

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +|++||+|.+|++.|.....|..|++.|+
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            58999999999999999999999999997

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=6.6e-07  Score=58.06  Aligned_cols=29  Identities=21%  Similarity=0.328  Sum_probs=27.4

Q ss_pred             CCCCceeccc--cccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~--C~k~F~~~~~L~~H~~~H~   29 (391)
                      +|+|||+|+.  |+|.|.++..|.+|+++|+
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            5899999986  9999999999999999997

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.22  E-value=3.9e-07  Score=57.70  Aligned_cols=32  Identities=19%  Similarity=0.479  Sum_probs=22.5

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |+++|++++||+|++|++.|..+..|..|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH
Confidence            45667777777777777777777777777666

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=3.5e-07  Score=57.94  Aligned_cols=29  Identities=24%  Similarity=0.493  Sum_probs=15.8

Q ss_pred             HhcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           75 RKHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        75 ~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      +|+++++|.|++|++.|..+..|..|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKT   31 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHH
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHH
Confidence            34555555555555555555555555555

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.21  E-value=5.8e-07  Score=55.75  Aligned_cols=26  Identities=35%  Similarity=0.651  Sum_probs=25.2

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||.|++|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhC
Confidence            68999999999999999999999998

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.14  E-value=1.9e-06  Score=63.36  Aligned_cols=39  Identities=15%  Similarity=0.238  Sum_probs=27.2

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHH-HHhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHF-SRKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~-~~H~~ekp~~C~~   86 (391)
                      +++||+|.++.|     ++.|...+.|..|+ ++|+++|||.|..
T Consensus        24 GEKPYkC~~~~C-----gKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           24 PYRPYRCVHQGC-----FAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSCBCCSTTC-----CCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCCCeECCCCCc-----ChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            677777754447     77777777777775 5677777777743

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.13  E-value=1.1e-06  Score=54.63  Aligned_cols=26  Identities=23%  Similarity=0.585  Sum_probs=10.7

Q ss_pred             CCCCccCCcCccccCChhHHHHHHhh
Q 016352           78 GEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        78 ~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      ++++|.|++|++.|..+..|..|+++
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~   29 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIRE   29 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHH
Confidence            33444444444444444444444433

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.13  E-value=8.5e-07  Score=56.80  Aligned_cols=25  Identities=28%  Similarity=0.679  Sum_probs=23.9

Q ss_pred             CCCCceeccccccccCChhhHHHHH
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHR   25 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~   25 (391)
                      +|+|||+|++|+|.|.++.+|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4899999999999999999999997

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.11  E-value=6.1e-08  Score=75.35  Aligned_cols=50  Identities=14%  Similarity=0.345  Sum_probs=42.8

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      ++++|+|++  |     ++.|.....|..|+++|++++||+|..|.+    ...|..|.++
T Consensus        22 ~~kpy~C~~--C-----~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~   71 (88)
T 1x6f_A           22 QNSTYQCKH--C-----DSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKY   71 (88)
T ss_dssp             CCSCEECSS--S-----CCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCC
T ss_pred             CCCCCcCCC--C-----CCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhcc
Confidence            889999999  9     999999999999999999999999987654    4445555555

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.10  E-value=1.4e-06  Score=54.37  Aligned_cols=27  Identities=19%  Similarity=0.570  Sum_probs=11.2

Q ss_pred             cCCCCccCCcCccccCChhHHHHHHhh
Q 016352           77 HGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        77 ~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      +++++|.|++|++.|..+..|..|+++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHH
Confidence            334444444444444444444444433

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=2.1e-06  Score=53.79  Aligned_cols=29  Identities=24%  Similarity=0.471  Sum_probs=27.5

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++++||+|.+|++.|.....|..|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            5 SSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            47899999999999999999999999997

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=2.4e-06  Score=53.64  Aligned_cols=29  Identities=24%  Similarity=0.547  Sum_probs=27.5

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++++||+|.+|++.|.....|..|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            5 SSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            47899999999999999999999999997

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=2.1e-06  Score=53.94  Aligned_cols=29  Identities=21%  Similarity=0.453  Sum_probs=27.5

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++++||+|.+|++.|.....|..|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            47899999999999999999999999997

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=2e-06  Score=50.27  Aligned_cols=27  Identities=22%  Similarity=0.491  Sum_probs=25.4

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++||.|+.|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            589999999999999999999999884

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=1.7e-06  Score=50.78  Aligned_cols=27  Identities=30%  Similarity=0.699  Sum_probs=25.2

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++||+|+.|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            589999999999999999999999884

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=1.7e-06  Score=55.07  Aligned_cols=29  Identities=24%  Similarity=0.680  Sum_probs=27.4

Q ss_pred             CCCCceecc--ccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~--~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +|++||.|.  .|++.|.....|.+|+++|+
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhC
Confidence            589999999  59999999999999999997

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.04  E-value=3.5e-06  Score=54.04  Aligned_cols=35  Identities=17%  Similarity=0.392  Sum_probs=27.5

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKC   84 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C   84 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++||.|
T Consensus         3 ~~k~~~C~~--C-----~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSF--C-----KREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTT--T-----CCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCC--C-----CcccCCHHHHHHHHHHcCCCcccee
Confidence            567788888  7     7888888888888888888877765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=3e-06  Score=53.03  Aligned_cols=29  Identities=24%  Similarity=0.597  Sum_probs=27.5

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++++||.|++|++.|.....|..|+++|+
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            47899999999999999999999999997

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=3.5e-06  Score=52.88  Aligned_cols=29  Identities=41%  Similarity=0.661  Sum_probs=27.3

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++++||+|+.|++.|.....|..|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            46899999999999999999999999997

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.99  E-value=1.7e-06  Score=54.93  Aligned_cols=32  Identities=3%  Similarity=-0.206  Sum_probs=28.3

Q ss_pred             cccCCCCCCccCCccccccCCchhHHhh-hhcc
Q 016352          175 ELMPMPPKPFNTMAAASIFESSNNNLQQ-SAAA  206 (391)
Q Consensus       175 ~~~htg~kp~~C~~C~~~F~~~~~L~~H-~~~~  206 (391)
                      +++|++++||+|+.|++.|..+..|.+| +...
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            3578899999999999999999999999 6544

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.98  E-value=1.9e-06  Score=55.11  Aligned_cols=24  Identities=21%  Similarity=0.510  Sum_probs=12.4

Q ss_pred             CCCCccCCcCccccCChhHHHHHH
Q 016352           78 GEKKWKCEKCSKKYAVQSDWKAHS  101 (391)
Q Consensus        78 ~ekp~~C~~C~k~F~~~~~L~~H~  101 (391)
                      +|+||+|++|+|.|..+++|.+|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            445555555555555555555554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=3.1e-06  Score=53.43  Aligned_cols=29  Identities=24%  Similarity=0.485  Sum_probs=27.3

Q ss_pred             CCCCceeccccccccCCh-hhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRD-QNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~-~~L~~H~~~H~   29 (391)
                      ++++||+|+.|++.|... ..|..|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            5 SSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            478999999999999999 99999999996

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=3.4e-06  Score=53.53  Aligned_cols=29  Identities=17%  Similarity=0.359  Sum_probs=27.3

Q ss_pred             CCCCceeccccccccCChhhHHHH-HHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLH-RRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H-~~~H~   29 (391)
                      +|++||+|+.|++.|..+..|..| ++.|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            5 SSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            478999999999999999999999 89986

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.95  E-value=4.2e-06  Score=56.65  Aligned_cols=29  Identities=24%  Similarity=0.596  Sum_probs=27.7

Q ss_pred             CCCCceeccccccccCChhhHHHHHH-hcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRR-GHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~-~H~   29 (391)
                      +|++||.|.+|+|.|.....|..|++ +|+
T Consensus         3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            3 DRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             TTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            58999999999999999999999999 997

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.95  E-value=6.4e-06  Score=50.86  Aligned_cols=32  Identities=19%  Similarity=0.394  Sum_probs=23.1

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCcc
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWK   83 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~   83 (391)
                      ++|.|++  |     ++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~--C-----~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPE--C-----PKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSS--S-----CCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCC--C-----CchhCCHHHHHHHHHHhCCCCCCC
Confidence            3577777  7     777777777777777777777764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.95  E-value=4e-06  Score=49.23  Aligned_cols=27  Identities=26%  Similarity=0.673  Sum_probs=25.5

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++||.|+.|++.|.....|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            589999999999999999999999985

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=3.8e-06  Score=53.01  Aligned_cols=28  Identities=21%  Similarity=0.360  Sum_probs=12.8

Q ss_pred             hcCCCCccCCcCccccCCh-hHHHHHHhh
Q 016352           76 KHGEKKWKCEKCSKKYAVQ-SDWKAHSKT  103 (391)
Q Consensus        76 H~~ekp~~C~~C~k~F~~~-~~L~~H~~~  103 (391)
                      |++++||+|++|++.|... ..|..|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHh
Confidence            3444444444444444444 444444444

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.90  E-value=6.9e-06  Score=48.66  Aligned_cols=27  Identities=19%  Similarity=0.550  Sum_probs=25.7

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++||.|..|++.|.....|..|++.|+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhc
Confidence            589999999999999999999999997

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.89  E-value=5.2e-06  Score=52.01  Aligned_cols=28  Identities=29%  Similarity=0.465  Sum_probs=12.1

Q ss_pred             hcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           76 KHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        76 H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |++++||+|++|++.|.....|..|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNR   31 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHH
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHH
Confidence            3344444444444444444444444443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.88  E-value=6.3e-06  Score=51.49  Aligned_cols=19  Identities=16%  Similarity=0.256  Sum_probs=7.8

Q ss_pred             CCccCCHHHHHHHHHHhcC
Q 016352           60 ARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~~   78 (391)
                      ++.|.....|..|+++|++
T Consensus        16 ~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A           16 SYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCEESSHHHHHHHHHHHTC
T ss_pred             CcccCCHHHHHHHHHHccC
Confidence            4444444444444444433

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=5.2e-06  Score=52.03  Aligned_cols=27  Identities=19%  Similarity=0.431  Sum_probs=11.4

Q ss_pred             cCCCCccCCcCccccCChhHHHHHHhh
Q 016352           77 HGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        77 ~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      ++++||+|++|++.|..+..|..|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            334444444444444444444444433

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.87  E-value=6.4e-07  Score=55.10  Aligned_cols=26  Identities=31%  Similarity=0.556  Sum_probs=25.0

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||+|++|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~   26 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAF   26 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHc
Confidence            68999999999999999999999998

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.87  E-value=4.9e-06  Score=56.31  Aligned_cols=33  Identities=12%  Similarity=0.039  Sum_probs=28.4

Q ss_pred             cCCCCCCccCCccccccCCchhHHhhhh-ccCCC
Q 016352          177 MPMPPKPFNTMAAASIFESSNNNLQQSA-AASAS  209 (391)
Q Consensus       177 ~htg~kp~~C~~C~~~F~~~~~L~~H~~-~~~~s  209 (391)
                      +|++++||.|.+|++.|....+|.+|++ .+...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            4789999999999999999999999998 65543

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.86  E-value=7.1e-06  Score=51.66  Aligned_cols=32  Identities=31%  Similarity=0.621  Sum_probs=30.4

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp   81 (391)
                      ++++|.|++  |     ++.|.....|..|+++|++++|
T Consensus         6 ~~k~~~C~~--C-----~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            6 SGRSYSCPV--C-----EKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCEETT--T-----TEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCcCCCC--C-----CCccCCHHHHHHHHHHHcCCCC
Confidence            789999999  9     9999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.85  E-value=9.1e-06  Score=50.73  Aligned_cols=26  Identities=27%  Similarity=0.552  Sum_probs=10.8

Q ss_pred             CCCCccCCcCccccCChhHHHHHHhh
Q 016352           78 GEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        78 ~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      ++++|.|++|++.|..+..|..|+++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHH
Confidence            33444444444444444444444433

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.85  E-value=6.8e-06  Score=52.06  Aligned_cols=29  Identities=28%  Similarity=0.606  Sum_probs=27.0

Q ss_pred             CCCCceeccc--cccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~--C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++++||.|.+  |++.|.....|.+|+++|+
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            5899999995  9999999999999999996

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.84  E-value=8.2e-06  Score=48.13  Aligned_cols=26  Identities=38%  Similarity=0.701  Sum_probs=24.9

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||.|+.|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            68999999999999999999999996

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.04  E-value=2.4e-06  Score=49.44  Aligned_cols=26  Identities=38%  Similarity=0.763  Sum_probs=24.3

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||.|++|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999999873

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.82  E-value=9.7e-06  Score=52.41  Aligned_cols=19  Identities=11%  Similarity=0.116  Sum_probs=9.0

Q ss_pred             CCccCCHHHHHHHHHHhcC
Q 016352           60 ARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~~   78 (391)
                      ++.|...+.|..|+++|++
T Consensus        18 ~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A           18 DYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCEESCHHHHHHHHHHHSC
T ss_pred             CCccCCHHHHHHHHHhcCC
Confidence            4444444444444444443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.81  E-value=8.2e-06  Score=59.66  Aligned_cols=29  Identities=24%  Similarity=0.517  Sum_probs=27.5

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      .++|||+|.+|+|.|..+..|.+|+++|+
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            36899999999999999999999999998

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.81  E-value=1e-05  Score=47.59  Aligned_cols=26  Identities=42%  Similarity=1.003  Sum_probs=24.9

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||.|++|++.|.....|..|++.|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhc
Confidence            68999999999999999999999997

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.77  E-value=2e-05  Score=57.51  Aligned_cols=38  Identities=11%  Similarity=0.235  Sum_probs=23.4

Q ss_pred             cCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcC
Q 016352           42 IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKC   87 (391)
Q Consensus        42 ~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C   87 (391)
                      .++++|+|.+  |     ++.|.....|..|+++|++++ +.|..+
T Consensus         9 ~~ekpy~C~~--C-----gK~F~~~s~L~~H~r~Htg~~-~~~~~~   46 (66)
T 2epp_A            9 REAGILPCGL--C-----GKVFTDANRLRQHEAQHGVTS-LQLGYI   46 (66)
T ss_dssp             CCCCCCCCTT--T-----CCCCSCHHHHHHHHHHHTTTS-CCCCSC
T ss_pred             CCccCcCCCC--C-----CCccCCHHHHHhhhhhhCCCc-cccccc
Confidence            3566677766  6     677777777777777666643 334443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.75  E-value=2.3e-05  Score=49.56  Aligned_cols=35  Identities=14%  Similarity=0.452  Sum_probs=24.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~   82 (391)
                      ++++|+|.++.|     ++.|.....|..|+++|+++++|
T Consensus         3 ~~k~~~C~~~~C-----~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGC-----GQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTT-----CCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCC-----CcccCCHHHHHHHHHHhCCCCCC
Confidence            566777772227     77777777777777777777665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.74  E-value=1.8e-05  Score=48.01  Aligned_cols=27  Identities=30%  Similarity=0.800  Sum_probs=25.7

Q ss_pred             CCceecc--ccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~--~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++||.|.  .|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            5899999  89999999999999999997

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.74  E-value=1.4e-05  Score=47.20  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=24.8

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||.|.+|++.|.....|..|++.|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHc
Confidence            68999999999999999999999997

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=1.3e-05  Score=47.10  Aligned_cols=26  Identities=35%  Similarity=0.608  Sum_probs=24.8

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||.|.+|++.|.....|..|+++|+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhc
Confidence            68999999999999999999999996

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.88  E-value=5.2e-06  Score=49.40  Aligned_cols=27  Identities=33%  Similarity=0.593  Sum_probs=25.5

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++||+|+.|++.|.....|..|++.|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            579999999999999999999999986

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=1.4e-05  Score=46.91  Aligned_cols=26  Identities=31%  Similarity=0.547  Sum_probs=24.8

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||.|..|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhc
Confidence            68999999999999999999999986

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.86  E-value=5.5e-06  Score=49.06  Aligned_cols=26  Identities=31%  Similarity=0.638  Sum_probs=24.8

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||.|++|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            68999999999999999999999996

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.67  E-value=2.2e-05  Score=47.20  Aligned_cols=26  Identities=42%  Similarity=0.898  Sum_probs=24.8

Q ss_pred             Cceecc--ccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~--~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||.|+  .|++.|.....|..|+++|+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            689998  99999999999999999997

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.65  E-value=2.1e-05  Score=45.47  Aligned_cols=25  Identities=28%  Similarity=0.748  Sum_probs=23.2

Q ss_pred             ceeccccccccCChhhHHHHHHhcC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||+|++|++.|.....|..|+++|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            6999999999999999999999996

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.58  E-value=2.2e-05  Score=52.64  Aligned_cols=29  Identities=34%  Similarity=0.607  Sum_probs=26.9

Q ss_pred             CCCCceecc--ccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~--~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +|++||.|+  .|++.|.....|.+|+++|+
T Consensus        14 ~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A           14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             ETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             CCCCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            478999996  79999999999999999997

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.57  E-value=3.1e-05  Score=45.88  Aligned_cols=26  Identities=31%  Similarity=0.759  Sum_probs=24.3

Q ss_pred             CceeccccccccCChhhHHHH-HHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLH-RRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H-~~~H~   29 (391)
                      +||.|..|++.|.....|..| ++.|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHcc
Confidence            689999999999999999999 78886

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.53  E-value=8.2e-06  Score=54.82  Aligned_cols=30  Identities=20%  Similarity=0.550  Sum_probs=16.4

Q ss_pred             HHhcCCCCccCC--cCccccCChhHHHHHHhh
Q 016352           74 SRKHGEKKWKCE--KCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        74 ~~H~~ekp~~C~--~C~k~F~~~~~L~~H~~~  103 (391)
                      ..|++++||+|+  .|++.|..+..|..|+++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            345555555553  455555555555555555

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.49  E-value=5.2e-05  Score=44.42  Aligned_cols=26  Identities=27%  Similarity=0.689  Sum_probs=24.6

Q ss_pred             Cceecc--ccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~--~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +||.|+  .|++.|.....|..|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            589999  99999999999999999985

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.47  E-value=0.00011  Score=45.66  Aligned_cols=30  Identities=13%  Similarity=0.444  Sum_probs=21.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      .+++|+|++  |     ++.|.....|..|+++|+++
T Consensus         6 ~~k~~~C~~--C-----~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            6 SGKIFTCEY--C-----NKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCCEECTT--T-----CCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCEECCC--C-----CceeCCHHHHHHHHHHhCCC
Confidence            566777777  7     77777777777777777665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.40  E-value=0.00012  Score=42.91  Aligned_cols=28  Identities=25%  Similarity=0.603  Sum_probs=19.2

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      ++|.|+.  |     ++.|.....|..|+++|+++
T Consensus         2 k~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDY--C-----GRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTT--T-----CCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCC--C-----CcccCCHHHHHHHHHHhccC
Confidence            4667776  6     67777777777777766655

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.34  E-value=0.00018  Score=45.22  Aligned_cols=33  Identities=21%  Similarity=0.618  Sum_probs=21.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      ++++|.|.++.|     ++.|.....|..|+++|++++
T Consensus         5 ~~k~~~C~~~~C-----~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            5 KKKQHICHIQGC-----GKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SCCCEECCSTTC-----CCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCC-----CCccCCHHHHHHHHHhcCCCC
Confidence            566777762226     777777777777777776653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.33  E-value=0.00013  Score=43.61  Aligned_cols=27  Identities=19%  Similarity=0.561  Sum_probs=17.5

Q ss_pred             eeecC--CCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           46 VYVCP--EPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        46 ~~~C~--~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +|.|+  .  |     ++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~--C-----~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSY--C-----GKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTT--C-----CCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCC--C-----CcccCCHhHHHHHHHHhcCC
Confidence            56665  4  6     66666666666666666655

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.32  E-value=0.00018  Score=41.93  Aligned_cols=27  Identities=30%  Similarity=0.723  Sum_probs=17.4

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +|.|++  |     ++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEV--C-----TRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTT--T-----CCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCC--C-----CcccCCHHHHHHHHHHhcCC
Confidence            566666  6     66666666666666666654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.31  E-value=0.00013  Score=43.95  Aligned_cols=20  Identities=10%  Similarity=0.139  Sum_probs=10.6

Q ss_pred             CCccCCHHHHHHHHHHhcCC
Q 016352           60 ARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~~e   79 (391)
                      ++.|.....|..|+++|+++
T Consensus        12 ~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A           12 DKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCCBSSSHHHHHHHGGGTCC
T ss_pred             CCccCCHHHHHHHHHHccCC
Confidence            55555555555555555543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.31  E-value=0.00018  Score=41.87  Aligned_cols=29  Identities=28%  Similarity=0.578  Sum_probs=21.0

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      ++|.|++  |     ++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~--C-----~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRE--C-----GKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTT--T-----SCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCC--C-----CCccCChhHHHHHHHHhcCCC
Confidence            3677777  7     777777777777777777653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.30  E-value=9.4e-06  Score=49.64  Aligned_cols=23  Identities=9%  Similarity=0.036  Sum_probs=12.1

Q ss_pred             CCccCCHHHHHHHHHHhcCCCCc
Q 016352           60 ARALGDLTGIKKHFSRKHGEKKW   82 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~~ekp~   82 (391)
                      ++.|.....|..|+++|++++||
T Consensus         9 ~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            9 PKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CcccCCHHHHHHHHHHHccCCCC
Confidence            55555555555555555555443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.28  E-value=0.00014  Score=42.59  Aligned_cols=27  Identities=19%  Similarity=0.506  Sum_probs=16.8

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +|.|+.  |     ++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C-----~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPE--C-----PKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSS--S-----SCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCC--C-----CchhCCHHHHHHHHHHhcCC
Confidence            566666  6     66666666666666666554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.18  E-value=0.00021  Score=41.91  Aligned_cols=20  Identities=25%  Similarity=0.383  Sum_probs=10.4

Q ss_pred             CCccCCHHHHHHHHHHhcCC
Q 016352           60 ARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~~e   79 (391)
                      ++.|.....|..|+++|+++
T Consensus         9 ~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            9 EFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             SCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCHHHHHHHHHHHccC
Confidence            55555555555555555444

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.15  E-value=0.00019  Score=41.69  Aligned_cols=27  Identities=19%  Similarity=0.550  Sum_probs=14.6

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +|.|++  |     ++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C-----~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPH--C-----DKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSS--C-----CCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCC--C-----CcccCCHHHHHHHHHHhccC
Confidence            455555  5     55555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.09  E-value=0.0003  Score=40.74  Aligned_cols=26  Identities=19%  Similarity=0.537  Sum_probs=13.8

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      ++|.|++  |     ++.|.....|..|+++|+
T Consensus         2 k~~~C~~--C-----~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSV--C-----GKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSS--S-----CCEESCHHHHHHHHTTSC
T ss_pred             cCccCCC--C-----CcccCCHHHHHHHHHhcC
Confidence            3455555  5     555555555555555543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.08  E-value=0.00035  Score=40.19  Aligned_cols=23  Identities=22%  Similarity=0.453  Sum_probs=10.7

Q ss_pred             CCccCCcCccccCChhHHHHHHh
Q 016352           80 KKWKCEKCSKKYAVQSDWKAHSK  102 (391)
Q Consensus        80 kp~~C~~C~k~F~~~~~L~~H~~  102 (391)
                      +||.|+.|++.|.....|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLR   24 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHH
Confidence            34444444444444444444443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.08  E-value=9.9e-05  Score=43.34  Aligned_cols=27  Identities=22%  Similarity=0.516  Sum_probs=15.9

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +|.|++  |     ++.|.....|..|+++|+++
T Consensus         2 ~~~C~~--C-----~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVM--C-----GKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            455665  5     56666666666666655544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.02  E-value=0.0013  Score=47.46  Aligned_cols=56  Identities=20%  Similarity=0.207  Sum_probs=36.1

Q ss_pred             ccccccCChhhHHHHH-HhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352           10 ICNKGFQRDQNLQLHR-RGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        10 ~C~k~F~~~~~L~~H~-~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      .|++.|.+...|..|+ +.|....       .......|.|...+|     ++.+.....|..|++..+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~-------~~~~~~~~~C~W~~C-----~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQD-------FKHPMEPLACNWEDC-----DFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCC-------CCCSSCCEECCCSSC-----CCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcc-------cCCCCCCCEeeCCCC-----cCCCCChHHHHhhccccC
Confidence            4888888888888887 4664110       000123688876667     777777777888877653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.07  E-value=0.0001  Score=43.42  Aligned_cols=28  Identities=32%  Similarity=0.744  Sum_probs=15.5

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      ++|.|+.  |     ++.|.....|..|+++|+++
T Consensus         2 k~~~C~~--C-----~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIH--C-----QRQFADPGALQRHVRIHTGE   29 (30)
Confidence            3455555  5     55555555555555555543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.97  E-value=0.00032  Score=40.58  Aligned_cols=24  Identities=17%  Similarity=0.451  Sum_probs=12.2

Q ss_pred             CCccCCcCccccCChhHHHHHHhh
Q 016352           80 KKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        80 kp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      +||+|+.|++.|.....|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            445555555555555555555443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.93  E-value=0.00046  Score=39.49  Aligned_cols=19  Identities=11%  Similarity=0.274  Sum_probs=9.7

Q ss_pred             CCccCCHHHHHHHHHHhcC
Q 016352           60 ARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~~   78 (391)
                      ++.|.....|..|+++|++
T Consensus         8 ~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            8 ERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CCBCSSHHHHHHHGGGTCC
T ss_pred             CCcCCCHHHHHHHHHHcCC
Confidence            5555555555555555443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.88  E-value=0.0016  Score=46.95  Aligned_cols=51  Identities=14%  Similarity=0.320  Sum_probs=26.9

Q ss_pred             eecCCCCCCCCCCCCccCCHHHHHHHH-HHhcCCC------CccCC--cCccccCChhHHHHHHh
Q 016352           47 YVCPEPSCVHHNPARALGDLTGIKKHF-SRKHGEK------KWKCE--KCSKKYAVQSDWKAHSK  102 (391)
Q Consensus        47 ~~C~~~~C~~~~~~k~F~~~~~L~~H~-~~H~~ek------p~~C~--~C~k~F~~~~~L~~H~~  102 (391)
                      +.|.+..|     ++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++
T Consensus         2 l~C~W~~C-----~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            2 LKCKWKEC-----PESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCTTC-----CCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CeEeeCCC-----CCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            34555556     67777777777776 3555443      34442  34444444444444443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.75  E-value=0.00048  Score=40.43  Aligned_cols=20  Identities=15%  Similarity=0.516  Sum_probs=10.9

Q ss_pred             CccCCcCccccCChhHHHHH
Q 016352           81 KWKCEKCSKKYAVQSDWKAH  100 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H  100 (391)
                      ||.|+.|++.|.....|..|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHH
T ss_pred             CcCCcccCcccCChHHHHHH
Confidence            45555555555555555555

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.67  E-value=0.0011  Score=38.44  Aligned_cols=25  Identities=32%  Similarity=0.724  Sum_probs=15.6

Q ss_pred             eeecC--CCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352           46 VYVCP--EPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        46 ~~~C~--~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      +|.|+  .  |     ++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~--C-----~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFEN--C-----GRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTT--T-----CEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCc--C-----cCccCCHHHHHHHHHHhC
Confidence            45666  5  6     666666666666666654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.51  E-value=0.00042  Score=39.44  Aligned_cols=23  Identities=26%  Similarity=0.719  Sum_probs=12.1

Q ss_pred             CccCCcCccccCChhHHHHHHhh
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      ||.|++|++.|.....|..|+++
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            45555555555555555555443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.47  E-value=0.0058  Score=50.31  Aligned_cols=29  Identities=7%  Similarity=-0.107  Sum_probs=25.5

Q ss_pred             ccCCCCCCccCCccccccCCchhHHhhhh
Q 016352          176 LMPMPPKPFNTMAAASIFESSNNNLQQSA  204 (391)
Q Consensus       176 ~~htg~kp~~C~~C~~~F~~~~~L~~H~~  204 (391)
                      ..+.+.+.|.|.+|++.|.+...|..|..
T Consensus        86 ~~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           86 ISDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CSSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             cccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            35667888999999999999999999983

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.75  E-value=0.0021  Score=52.47  Aligned_cols=29  Identities=24%  Similarity=0.402  Sum_probs=26.3

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||++||.|..|+|.|.+...|..|+++..
T Consensus        46 tGekpfyC~~C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           46 PGGGLHRCLACARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             CCCcceEcccCcchhCCHHHHHHHHhhhh
Confidence            58899999999999999999999987653

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.39  E-value=0.0032  Score=51.41  Aligned_cols=32  Identities=16%  Similarity=-0.018  Sum_probs=28.6

Q ss_pred             ccccCCCCCCccCCccccccCCchhHHhhhhc
Q 016352          174 HELMPMPPKPFNTMAAASIFESSNNNLQQSAA  205 (391)
Q Consensus       174 H~~~htg~kp~~C~~C~~~F~~~~~L~~H~~~  205 (391)
                      +...|+|+++|.|..|++.|.+...|..|++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            44578899999999999999999999999943

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.64  E-value=0.095  Score=44.87  Aligned_cols=77  Identities=17%  Similarity=0.449  Sum_probs=54.7

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCcccChh
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFSRRD  121 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~~~~  121 (391)
                      +....|+..+|     ...+ ....|..|.. .=..++..|+.|+..+ .+..|..|+.. ...+...|. |+..|.. .
T Consensus        80 ~l~v~C~n~GC-----~~~~-~~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~  150 (170)
T 3hcs_A           80 SLMVKCPNEGC-----LHKM-ELRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-E  150 (170)
T ss_dssp             TSEEECCSTTC-----CCEE-EGGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-G
T ss_pred             hcccCCCCCCC-----Ccee-cHhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-H
Confidence            45667865567     5544 3556777763 2234567899998887 56788899876 788888999 9988855 5


Q ss_pred             HHHHHHHH
Q 016352          122 SFITHRAF  129 (391)
Q Consensus       122 ~L~~H~~~  129 (391)
                      .|..|..+
T Consensus       151 ~l~~H~~~  158 (170)
T 3hcs_A          151 DKEIHDQN  158 (170)
T ss_dssp             GHHHHHTT
T ss_pred             HHHhHHHh
Confidence            67888864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.37  E-value=0.049  Score=36.18  Aligned_cols=23  Identities=17%  Similarity=0.483  Sum_probs=18.0

Q ss_pred             CceecC-CCCcccChhHHHHHHHH
Q 016352          107 KEYKCD-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus       107 k~~~C~-C~k~F~~~~~L~~H~~~  129 (391)
                      .+|.|+ |+..|...+.|+.|++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            567788 88888888888888863

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.21  E-value=0.1  Score=42.69  Aligned_cols=83  Identities=14%  Similarity=0.243  Sum_probs=52.1

Q ss_pred             CceeccccccccCChhhHHHHH--HhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHR--RGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKK   81 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~--~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp   81 (391)
                      +++.|.+|...|.+...+..|.  +.|..            ..+.+.+... ....-+++.+....    +...+.+.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~------------~v~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~   93 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHAN------------KVRRYMAINQ-GEDSVPAKKFKAAP----AEISDGEDRS   93 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHH------------HHHHHHHHTT-CCCCCSCCCCSCCS----SCCSSCCCTT
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHH------------HHHHHhcccC-cccCCCCCccCCCc----cccccCCCCC
Confidence            5788999999999999999998  56641            0012222100 00000122332211    1223556778


Q ss_pred             ccCCcCccccCChhHHHHHHhh
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |.|..|++.|.....+..|...
T Consensus        94 ~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           94 KCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             TEETTTTEECSSHHHHHHHHTS
T ss_pred             eEcCCCCCEeCCHHHHHHHHCC
Confidence            9999999999999999999865

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.07  E-value=0.074  Score=35.33  Aligned_cols=23  Identities=17%  Similarity=0.501  Sum_probs=14.3

Q ss_pred             CccCCcCccccCChhHHHHHHhh
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      .|.|+.|++.|.....|+.||+.
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhh
Confidence            45666666666666666666654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=86.71  E-value=0.83  Score=38.82  Aligned_cols=57  Identities=21%  Similarity=0.403  Sum_probs=43.4

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCCCce
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGTKEY  109 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~gek~~  109 (391)
                      .++..|+.  |     +..+ .+..|..|....-..+.-.|..|+..+. ...|..|... .|+.++
T Consensus       108 ~~~v~C~~--C-----~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          108 FALMDCPQ--C-----QRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             TSEEECTT--T-----CCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             ceeeECCC--C-----ChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            46788987  9     7766 5678999998888888889999998885 4678999988 676543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=81.17  E-value=0.96  Score=27.95  Aligned_cols=26  Identities=23%  Similarity=0.487  Sum_probs=22.3

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ..|.|++|-+.|.....|..|....+
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            45999999999999999999965443

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=80.35  E-value=0.32  Score=36.02  Aligned_cols=36  Identities=19%  Similarity=0.497  Sum_probs=17.5

Q ss_pred             ccCCcCccccCChhHHHHHHhh-cCCCceecC-CCCccc
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT-CGTKEYKCD-CGTIFS  118 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~-~gek~~~C~-C~k~F~  118 (391)
                      |.|+.|+..+. +..+..|... .+...|.|- |++.|.
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            45555554433 3445555444 233445555 555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	391
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.003

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 8/36 (22%), Positives = 14/36 (38%), Gaps = 2/36 (5%)

Query: 79  EKKWKCEKCSKKYAVQSDWKAHSKTC--GTKEYKCD 112
            K + C+ C K ++       H K      + +KC 
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 79  EKKWKCEKCSKKYAVQSDWKAHSKTCGT-KEYKCD-CGTIFSRRDSFITHR 127
           +K + C+ C K +  +S    H       + Y C  CG  F  +   + H 
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	391
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.39
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.36
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.99
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.89
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.84
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.83
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.83
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.79
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.79
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.78
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.77
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.72
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.7
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.7
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.7
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.69
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.69
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.65
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.64
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.63
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.58
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.4
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.35
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.33
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.31
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.3
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.29
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.29
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.26
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.24
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.23
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.19
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.19
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.14
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.11
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.1
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.08
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.05
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.02
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.97
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.92
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.82
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.79
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.52
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.4
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.4
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.23
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.22
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.18
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.14
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.1
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.09
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.98
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.93
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.92
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.88
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.74
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.69
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.62
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.5
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.48
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.44
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.37
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.37
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.35
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.29
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.28
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.26
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.15
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.08
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.06
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.03
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.0
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.98
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.94
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.92
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.91
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.79
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.76
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.65
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.55
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.53
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.05
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.73
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.67
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	94.66
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.56
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.24
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.05
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.44
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.95
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.92
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.92
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.7
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.72
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.65
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.04
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.94
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.76
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	88.33
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.98
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	84.58
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	83.27
d1y0jb1	36	U-shaped transcription factor, different fingers {	83.17
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.17
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	81.97
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	80.91
d1y0jb1	36	U-shaped transcription factor, different fingers {	80.59
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	80.43
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	80.42

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.1e-13  Score=96.09  Aligned_cols=53  Identities=21%  Similarity=0.418  Sum_probs=29.0

Q ss_pred             CCceeccccccccCChhhHHHHHHhcCCCcccccccccccCCceeecCCCCCCCCCCCCccCCHHHHHHHHHHh
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRK   76 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H   76 (391)
                      ||||+|+ ||+.|..+..|..|+++|+             +++||.|++  |     ++.|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht-------------~ekpy~C~~--C-----~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHL-------------GLRPYGCGV--C-----GKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHS-------------CCCSEECTT--T-----SCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccc-------------cccCCcCCC--c-----CCEecCHHHHHHHHhcC
Confidence            4555553 5555555555555555555             555555555  5     55555555555555544

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.4e-13  Score=94.19  Aligned_cols=52  Identities=23%  Similarity=0.621  Sum_probs=33.9

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |++|+| .  |     ++.|.....|..|+++|++++||.|++|++.|.....|..|+++
T Consensus         1 EK~y~C-~--C-----gk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPC-Q--C-----GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEEC-T--T-----SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCC-C--C-----CCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            356666 5  6     66666666666666666666666666666666666666666654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.1e-10  Score=74.48  Aligned_cols=38  Identities=29%  Similarity=0.626  Sum_probs=34.5

Q ss_pred             CCCCceeccccccccCChhhHHHHHH-hcCCCcccccccccccCCceeecCC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLRQRSTTEIRKRVYVCPE   51 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~-~H~~~~~~~~~~~~~~~~~~~~C~~   51 (391)
                      +.+|||+|++|+|.|....+|.+|++ +|+             +++||+|++
T Consensus         1 s~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht-------------~ekpy~C~i   39 (39)
T d2epsa1           1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHT-------------SERPHKCQV   39 (39)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSC-------------CCCCCCSSS
T ss_pred             CCCCCccCCCCCCCcCChHHhhccCcCccC-------------CCcCcCCcC
Confidence            35899999999999999999999986 798             999999974

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=3.6e-10  Score=70.23  Aligned_cols=29  Identities=31%  Similarity=0.583  Sum_probs=28.3

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||+|||+|++|+|.|.++.+|.+|+++|+
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccC
Confidence            79999999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=7.2e-10  Score=70.08  Aligned_cols=33  Identities=15%  Similarity=0.094  Sum_probs=31.0

Q ss_pred             ccccCCCCCCccCCccccccCCchhHHhhhhcc
Q 016352          174 HELMPMPPKPFNTMAAASIFESSNNNLQQSAAA  206 (391)
Q Consensus       174 H~~~htg~kp~~C~~C~~~F~~~~~L~~H~~~~  206 (391)
                      |.++|+|||||+|++|+++|.++++|.+|++..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            788999999999999999999999999999764

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=9.3e-10  Score=70.02  Aligned_cols=36  Identities=8%  Similarity=0.126  Sum_probs=33.4

Q ss_pred             cccccCCCCCCccCCccccccCCchhHHhhhhccCC
Q 016352          173 HHELMPMPPKPFNTMAAASIFESSNNNLQQSAAASA  208 (391)
Q Consensus       173 ~H~~~htg~kp~~C~~C~~~F~~~~~L~~H~~~~~~  208 (391)
                      +|+++|+++|||+|++|+++|...++|.+|++...+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            688999999999999999999999999999987654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=9e-10  Score=67.49  Aligned_cols=29  Identities=31%  Similarity=0.567  Sum_probs=28.3

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||+|||+|.+|+|+|.....|..|+++|+
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            79999999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=6.6e-10  Score=70.26  Aligned_cols=33  Identities=18%  Similarity=0.451  Sum_probs=25.6

Q ss_pred             HHHHhcCCCCccCCcCccccCChhHHHHHHhhc
Q 016352           72 HFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTC  104 (391)
Q Consensus        72 H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~  104 (391)
                      |.|+|++||||+|++|++.|..+.+|.+|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            557788888888888888888888888887764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.1e-09  Score=68.69  Aligned_cols=31  Identities=26%  Similarity=0.533  Sum_probs=23.8

Q ss_pred             HHhcCCCCccCCcCccccCChhHHHHHHhhc
Q 016352           74 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKTC  104 (391)
Q Consensus        74 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~~  104 (391)
                      |+|++||||+|.+|++.|..++.|..|+++|
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H   31 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY   31 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCccc
Confidence            4677778888888888888777787777774

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=4.6e-10  Score=71.47  Aligned_cols=36  Identities=25%  Similarity=0.640  Sum_probs=25.7

Q ss_pred             HHHHHhcCCCCccCCcCccccCChhHHHHHHhh-cCC
Q 016352           71 KHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGT  106 (391)
Q Consensus        71 ~H~~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~ge  106 (391)
                      +|+++|+++|||+|++|+|.|...++|..|+++ +||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            366677777777777777777777777777777 443

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.2e-09  Score=68.36  Aligned_cols=37  Identities=19%  Similarity=0.557  Sum_probs=30.3

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHH-HhcCCCCccCCc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFS-RKHGEKKWKCEK   86 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~-~H~~ekp~~C~~   86 (391)
                      .++||+|.+  |     ++.|.....|.+|++ +|++||||+|++
T Consensus         2 ~~Kpy~C~~--C-----gk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQS--C-----GKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSS--S-----CCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCC--C-----CCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            467888888  8     888888888888875 688888888864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.1e-09  Score=66.67  Aligned_cols=29  Identities=24%  Similarity=0.594  Sum_probs=28.2

Q ss_pred             CCCCceeccccccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||+|||+|++|+|+|..+..|..|+++|+
T Consensus         4 TgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           4 TGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            79999999999999999999999999997

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.3e-09  Score=67.21  Aligned_cols=33  Identities=21%  Similarity=0.449  Sum_probs=25.0

Q ss_pred             HHhcCCCCccCCcCccccCChhHHHHHHhh-cCC
Q 016352           74 SRKHGEKKWKCEKCSKKYAVQSDWKAHSKT-CGT  106 (391)
Q Consensus        74 ~~H~~ekp~~C~~C~k~F~~~~~L~~H~~~-~ge  106 (391)
                      |+|+|||||+|++|++.|..+.+|+.|++. |++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            467888888888888888888888888766 543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=2.2e-09  Score=63.10  Aligned_cols=27  Identities=37%  Similarity=0.797  Sum_probs=26.1

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||||+|++|+|.|.++.+|.+|+++|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            799999999999999999999999996

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.4e-09  Score=67.09  Aligned_cols=32  Identities=13%  Similarity=0.092  Sum_probs=28.9

Q ss_pred             ccCCCCCCccCCccccccCCchhHHhhhhccC
Q 016352          176 LMPMPPKPFNTMAAASIFESSNNNLQQSAAAS  207 (391)
Q Consensus       176 ~~htg~kp~~C~~C~~~F~~~~~L~~H~~~~~  207 (391)
                      ++|+|||||+|++|+++|.++++|.+|++..+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            58999999999999999999999999986543

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.7e-09  Score=64.68  Aligned_cols=28  Identities=29%  Similarity=0.605  Sum_probs=14.8

Q ss_pred             hcCCCCccCCcCccccCChhHHHHHHhh
Q 016352           76 KHGEKKWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        76 H~~ekp~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |++||||+|.+|+|.|..++.|..|+++
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~   29 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRV   29 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHG
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccc
Confidence            4555555555555555555555555554

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=6.1e-09  Score=65.06  Aligned_cols=35  Identities=26%  Similarity=0.723  Sum_probs=32.6

Q ss_pred             eecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCccCCc
Q 016352           47 YVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEK   86 (391)
Q Consensus        47 ~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~~C~~   86 (391)
                      |.|++++|     ++.|.....|.+|+++|++||||+|+.
T Consensus         2 f~C~~~~C-----~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPAC-----GKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTT-----CCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCC-----CCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78998889     999999999999999999999999973

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=3.7e-09  Score=60.64  Aligned_cols=26  Identities=31%  Similarity=0.637  Sum_probs=24.9

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||+|++|||.|...+.|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999984

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=5.6e-09  Score=64.72  Aligned_cols=32  Identities=16%  Similarity=0.218  Sum_probs=29.2

Q ss_pred             CCCCCCccCCccccccCCchhHHhhhhccCCC
Q 016352          178 PMPPKPFNTMAAASIFESSNNNLQQSAAASAS  209 (391)
Q Consensus       178 htg~kp~~C~~C~~~F~~~~~L~~H~~~~~~s  209 (391)
                      |+|||||+|.+|++.|.++++|.+|++.+...
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            78999999999999999999999999876543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.63  E-value=7.2e-09  Score=61.53  Aligned_cols=26  Identities=42%  Similarity=1.003  Sum_probs=25.4

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||+|++|+|.|.+...|.+|+++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCccc
Confidence            79999999999999999999999998

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.1e-08  Score=60.62  Aligned_cols=26  Identities=35%  Similarity=0.756  Sum_probs=25.4

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||.|.+|+|.|.++++|.+|+++|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCccC
Confidence            79999999999999999999999998

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=4.6e-08  Score=60.97  Aligned_cols=33  Identities=33%  Similarity=0.700  Sum_probs=30.8

Q ss_pred             eeccc--cccccCChhhHHHHHHhcCCCcccccccccccCCceeecCC
Q 016352            6 FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSTTEIRKRVYVCPE   51 (391)
Q Consensus         6 f~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~~~~~~~~~~~~~~C~~   51 (391)
                      |.|+.  |+|.|.++..|++|+++|+             +++||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht-------------gekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS-------------DTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH-------------TSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC-------------CCCCEeCCC
Confidence            88986  9999999999999999998             999999974

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.3e-07  Score=56.85  Aligned_cols=31  Identities=23%  Similarity=0.540  Sum_probs=26.6

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      +||+|++++|     ++.|...+.|..|+++|++||
T Consensus         1 kpf~C~~~~C-----~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYC-----GKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTC-----CCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCC-----CcCcCChhHhhhhcCcccccC
Confidence            5788987778     899999999999999998875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.8e-07  Score=55.68  Aligned_cols=30  Identities=13%  Similarity=0.418  Sum_probs=26.9

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +||+|++++|     ++.|...+.|..|+|+|+||
T Consensus         1 kp~~C~~~gC-----gk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGC-----GKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTC-----CCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCC-----CceECcHHHcCccccccCCC
Confidence            5899998889     99999999999999999886

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.31  E-value=1.8e-07  Score=55.35  Aligned_cols=29  Identities=34%  Similarity=0.764  Sum_probs=19.3

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      +||+|++  |     ++.|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~--C-----~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--C-----TRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--T-----CCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--C-----CCCCCCchHcccccCcccCCC
Confidence            4666666  6     666666666666666666664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2e-07  Score=55.41  Aligned_cols=30  Identities=23%  Similarity=0.533  Sum_probs=25.0

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +||+|++++|     ++.|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gC-----gk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGC-----RKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTC-----CCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCC-----CceECChhHhhhhcCcCcCC
Confidence            5788888888     88888888888888888875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.29  E-value=3.7e-08  Score=65.34  Aligned_cols=33  Identities=15%  Similarity=0.488  Sum_probs=21.6

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      +++||+|++++|     ++.|...+.|..|+++|++||
T Consensus        15 gekpy~C~~~~C-----~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          15 PDKTFECLFPGC-----TKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TTTEEECCCTTC-----CCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCCeECCcCCC-----CccccCchHHHhhcccccCCC
Confidence            666666665556     666666666666666666654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.8e-07  Score=55.61  Aligned_cols=26  Identities=35%  Similarity=0.731  Sum_probs=25.2

Q ss_pred             Cceeccc--cccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~--C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||+|+.  |+|.|.+..+|++|+++|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            7999998  9999999999999999998

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=2.9e-07  Score=53.79  Aligned_cols=28  Identities=18%  Similarity=0.527  Sum_probs=18.4

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~   78 (391)
                      |+||+|++  |     ++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~--C-----~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--C-----MRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--T-----CCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--C-----cCEecccccccccCCCccC
Confidence            45666666  6     6666666666666666654

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.24  E-value=1.4e-07  Score=62.40  Aligned_cols=29  Identities=34%  Similarity=0.670  Sum_probs=27.6

Q ss_pred             CCCCceeccc--cccccCChhhHHHHHHhcC
Q 016352            1 MATNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         1 ~g~kpf~C~~--C~k~F~~~~~L~~H~~~H~   29 (391)
                      +|++||+|.+  |+|.|.+..+|.+|+++|+
T Consensus        14 ~gekpy~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_          14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             ETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             cCCCCeECCcCCCCccccCchHHHhhccccc
Confidence            4899999987  9999999999999999998

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2.1e-07  Score=55.41  Aligned_cols=26  Identities=42%  Similarity=0.740  Sum_probs=24.9

Q ss_pred             Cceeccc--cccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~--C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||+|+.  |+|.|.+..+|.+|+++|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccccC
Confidence            7999987  9999999999999999997

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.19  E-value=3.5e-07  Score=55.18  Aligned_cols=27  Identities=30%  Similarity=0.828  Sum_probs=25.9

Q ss_pred             CCceeccc--cccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~--C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||||.|..  |+|.|.+..+|.+|+++|+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            69999998  9999999999999999997

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.5e-07  Score=53.99  Aligned_cols=29  Identities=24%  Similarity=0.657  Sum_probs=17.2

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      +||.|++  |     ++.|...+.|.+|+++|++||
T Consensus         1 Kpy~C~~--C-----~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--C-----PKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--T-----TCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--C-----CCeecchHHhhhhcCccCCcC
Confidence            3556666  5     666666666666666666553

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=2.8e-07  Score=53.70  Aligned_cols=26  Identities=38%  Similarity=0.760  Sum_probs=24.6

Q ss_pred             Cceeccc--cccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~--C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||+|+.  |+|.|.+..+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999988  9999999999999999985

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=6.6e-07  Score=53.62  Aligned_cols=26  Identities=42%  Similarity=0.898  Sum_probs=24.6

Q ss_pred             Cceecc--ccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~--~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||.|+  .|+|.|.+..+|.+|+++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccc
Confidence            799995  69999999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=7.4e-07  Score=52.43  Aligned_cols=29  Identities=31%  Similarity=0.720  Sum_probs=25.7

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~   78 (391)
                      +||+|++++|     ++.|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC-----~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESC-----DRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCC-----CcEECchhHhhhhcCccCC
Confidence            5899999889     9999999999999999875

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=9.3e-07  Score=49.77  Aligned_cols=27  Identities=30%  Similarity=0.698  Sum_probs=25.6

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||||.|++||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            699999999999999999999999984

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.05  E-value=5.8e-07  Score=52.88  Aligned_cols=26  Identities=31%  Similarity=0.777  Sum_probs=24.7

Q ss_pred             Cceeccc--cccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~--C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||+|++  |+|.|.+..+|.+|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            7999987  9999999999999999996

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.02  E-value=1.4e-06  Score=52.45  Aligned_cols=30  Identities=23%  Similarity=0.533  Sum_probs=19.9

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~   78 (391)
                      |+||.|++++|     ++.|.....|.+|+++|+.
T Consensus         1 ErP~~C~~pgC-----~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGC-----DKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTC-----CCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCC-----CCeeCCHHHHHHHhhhccC
Confidence            45666666666     6666666666666666654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.1e-06  Score=48.87  Aligned_cols=26  Identities=27%  Similarity=0.615  Sum_probs=16.9

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      +||+|.+  |     ||.|...+.|..|+|+|+
T Consensus         1 KPy~C~e--C-----gK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE--C-----GKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSS--S-----CCEESSHHHHHHHHHHHH
T ss_pred             CCccCCC--C-----cCeeccCcccccCccCCC
Confidence            4666666  6     666666666666666664

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=1.4e-06  Score=50.68  Aligned_cols=28  Identities=32%  Similarity=0.682  Sum_probs=21.3

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      +||+|++++|     +|.|...+.|++|+++|+
T Consensus         1 rPf~C~~~gC-----~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGC-----NKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTC-----CCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCc-----CCcCCCHHHHHHHHhhcc
Confidence            4777777777     777777777777777774

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=4.2e-06  Score=45.51  Aligned_cols=25  Identities=40%  Similarity=0.805  Sum_probs=23.8

Q ss_pred             ceeccccccccCChhhHHHHHHhcC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |.+|+.|+|.|.++..|+.|+|.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            6799999999999999999999996

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=6.6e-06  Score=46.24  Aligned_cols=24  Identities=38%  Similarity=0.801  Sum_probs=16.7

Q ss_pred             CCceecC-CCCcccChhHHHHHHHH
Q 016352          106 TKEYKCD-CGTIFSRRDSFITHRAF  129 (391)
Q Consensus       106 ek~~~C~-C~k~F~~~~~L~~H~~~  129 (391)
                      ||||.|+ |++.|.+++..++|.++
T Consensus         1 EkPf~C~~CgrkFArsderkRH~ki   25 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKI   25 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhh
Confidence            4677777 77777777777777754

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=2e-05  Score=44.92  Aligned_cols=27  Identities=26%  Similarity=0.765  Sum_probs=25.9

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ||||.|.+|...|+++..+.-|+|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhccccceEeeeccc
Confidence            699999999999999999999999996

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=4.4e-05  Score=42.47  Aligned_cols=27  Identities=30%  Similarity=0.647  Sum_probs=25.9

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      ++||+|..|.+.-...+.|..|+|.|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCcceeeecccccCCchheEEeeeccc
Confidence            689999999999999999999999997

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=4.5e-05  Score=44.44  Aligned_cols=26  Identities=35%  Similarity=0.683  Sum_probs=24.1

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |...|++|||.|..-..|.+|...|+
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs   29 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHS   29 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccC
Confidence            45679999999999999999999998

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=5.5e-05  Score=46.56  Aligned_cols=27  Identities=15%  Similarity=0.151  Sum_probs=24.8

Q ss_pred             CCCCCccCCccccccCCchhHHhhhhc
Q 016352          179 MPPKPFNTMAAASIFESSNNNLQQSAA  205 (391)
Q Consensus       179 tg~kp~~C~~C~~~F~~~~~L~~H~~~  205 (391)
                      +|-|||.|.+|++.|..+.++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            578999999999999999999999854

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=6.3e-05  Score=42.79  Aligned_cols=25  Identities=36%  Similarity=0.692  Sum_probs=15.1

Q ss_pred             CCceecC-CCCcccChhHHHHHHHHh
Q 016352          106 TKEYKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus       106 ek~~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      ||||.|+ |...|.+++.+..|.+.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrsh   26 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSH   26 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeeecc
Confidence            4566666 666666666666666543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00012  Score=40.30  Aligned_cols=27  Identities=22%  Similarity=0.492  Sum_probs=25.4

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      .|||+|..|++.-...++|..|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            489999999999999999999999995

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00012  Score=45.04  Aligned_cols=27  Identities=22%  Similarity=0.535  Sum_probs=24.8

Q ss_pred             CCCCceeccccccccCChhhHHHHHHh
Q 016352            1 MATNRFVCEICNKGFQRDQNLQLHRRG   27 (391)
Q Consensus         1 ~g~kpf~C~~C~k~F~~~~~L~~H~~~   27 (391)
                      ||-|||.|.+|+|.|--..++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            789999999999999999999999744

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.0002  Score=40.63  Aligned_cols=29  Identities=34%  Similarity=0.818  Sum_probs=23.4

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~   78 (391)
                      +||.|..++|     ++.+...+.|++|++.++|
T Consensus         1 KPY~Ck~~gC-----~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGC-----TKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTT-----CCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCC-----CcccCCHHHHHHHHHhhCC
Confidence            4788888888     8888888888888887664

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00013  Score=39.59  Aligned_cols=18  Identities=11%  Similarity=0.265  Sum_probs=10.2

Q ss_pred             CCccCCHHHHHHHHHHhc
Q 016352           60 ARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        60 ~k~F~~~~~L~~H~~~H~   77 (391)
                      ++.|+.+..|+.|+|.|+
T Consensus         8 ~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           8 GKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             TBCCCCHHHHHHHGGGCC
T ss_pred             hhHhcchhHHHHHhhccC
Confidence            555555555555555554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.0002  Score=41.65  Aligned_cols=31  Identities=23%  Similarity=0.545  Sum_probs=25.4

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCCCc
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKW   82 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ekp~   82 (391)
                      +...|+.  |     +|.|.....|.+|...|++||||
T Consensus         4 k~~~ce~--c-----gk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEI--C-----GKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETT--T-----TEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHH--H-----HHHHHHHHHHHhhhcccCCCCCC
Confidence            4557888  8     88888888888888888888887

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00028  Score=40.07  Aligned_cols=26  Identities=23%  Similarity=0.660  Sum_probs=23.8

Q ss_pred             Cceeccc--cccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEI--CNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~--C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||.|..  |+|+|...++|+.|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            7999987  9999999999999999764

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.92  E-value=0.00041  Score=38.58  Aligned_cols=27  Identities=22%  Similarity=0.503  Sum_probs=24.5

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHh
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRK   76 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H   76 (391)
                      .||+|+..+|     ++.|...+.|++|.++|
T Consensus         2 ~py~c~hegc-----dk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGC-----DKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCc-----cccccCHHHHhhhhhcc
Confidence            4899999889     99999999999999887

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00035  Score=38.58  Aligned_cols=25  Identities=32%  Similarity=0.599  Sum_probs=23.4

Q ss_pred             ceeccccccccCChhhHHHHHHhcC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      -..|..|||.|...+.|++|...|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTS
T ss_pred             cchHHHHhHHHHHHHHHHHHhhccc
Confidence            4689999999999999999999997

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.00065  Score=37.87  Aligned_cols=27  Identities=26%  Similarity=0.561  Sum_probs=23.9

Q ss_pred             eecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352           47 YVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus        47 ~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      |.|++  |     +......+-|++|+|.|++++
T Consensus         2 YvC~~--C-----g~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEE--C-----GIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTT--T-----CCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccc--c-----CcccCCHHHHHHHHHHhcCCC
Confidence            78999  8     889999999999999999874

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.69  E-value=0.00062  Score=37.86  Aligned_cols=24  Identities=25%  Similarity=0.520  Sum_probs=20.4

Q ss_pred             CceecC---CCCcccChhHHHHHHHHh
Q 016352          107 KEYKCD---CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus       107 k~~~C~---C~k~F~~~~~L~~H~~~h  130 (391)
                      .||+|+   |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            589996   999999999999998753

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00061  Score=37.46  Aligned_cols=24  Identities=29%  Similarity=0.526  Sum_probs=19.7

Q ss_pred             CceecC-CCCcccChhHHHHHHHHh
Q 016352          107 KEYKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus       107 k~~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      |||+|. |...-...++|..|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            688888 888888888888888753

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00066  Score=37.85  Aligned_cols=24  Identities=29%  Similarity=0.650  Sum_probs=22.5

Q ss_pred             ceeccccccccCChhhHHHHHHhc
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H   28 (391)
                      ||.|..|...|.++.+|..|++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999764

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.00092  Score=37.04  Aligned_cols=27  Identities=22%  Similarity=0.501  Sum_probs=15.1

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHG   78 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~   78 (391)
                      +||+|..  |     ...-.+.+.|.-|.|.|+|
T Consensus         2 rpfkcql--c-----sy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQI--C-----PYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSS--S-----SCEESSHHHHHHHHTTCCS
T ss_pred             Ccceeee--c-----ccccCCchheEEeeecccC
Confidence            4555555  5     5555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.001  Score=36.65  Aligned_cols=27  Identities=37%  Similarity=0.683  Sum_probs=20.7

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      .+.|.+  |     +|.|...+.|++|..+|++|
T Consensus         2 ~hvc~e--c-----gkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAE--C-----GKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTT--T-----CCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHH--H-----hHHHHHHHHHHHHhhcccCC
Confidence            356777  7     88888888888888888765

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.37  E-value=0.001  Score=36.10  Aligned_cols=23  Identities=35%  Similarity=0.719  Sum_probs=22.1

Q ss_pred             eccccccccCChhhHHHHHHhcC
Q 016352            7 VCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         7 ~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +|+.|.|.|.++..|+.|-|.|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~ht   24 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHT   24 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHS
T ss_pred             cCcchHHHHHHhHhhhhcccccc
Confidence            69999999999999999999998

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0013  Score=36.79  Aligned_cols=26  Identities=35%  Similarity=0.583  Sum_probs=18.2

Q ss_pred             CCccCCcCccccCChhHHHHHHhh-cC
Q 016352           80 KKWKCEKCSKKYAVQSDWKAHSKT-CG  105 (391)
Q Consensus        80 kp~~C~~C~k~F~~~~~L~~H~~~-~g  105 (391)
                      +||.|..|..+....++|+.|+++ |+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            467777777777777777777776 53

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.35  E-value=0.00095  Score=35.69  Aligned_cols=24  Identities=29%  Similarity=0.783  Sum_probs=22.6

Q ss_pred             eeccccccccCChhhHHHHHHhcC
Q 016352            6 FVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999984

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.29  E-value=0.0015  Score=36.33  Aligned_cols=27  Identities=33%  Similarity=0.792  Sum_probs=25.4

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      +..|.|..|...|++...|+.|+-.|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            567999999999999999999999997

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.28  E-value=0.0013  Score=36.71  Aligned_cols=30  Identities=23%  Similarity=0.600  Sum_probs=26.1

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +||.|.+.+|     .|.|.+...|.+|..+|++|
T Consensus         1 ~pfpc~~egc-----~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGC-----EKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSC-----CCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccc-----cccchhhhhhhhhhccccCC
Confidence            4788888888     99999999999999999875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.26  E-value=0.0012  Score=37.74  Aligned_cols=21  Identities=43%  Similarity=0.963  Sum_probs=17.2

Q ss_pred             ceecC-CCCcccChhHHHHHHH
Q 016352          108 EYKCD-CGTIFSRRDSFITHRA  128 (391)
Q Consensus       108 ~~~C~-C~k~F~~~~~L~~H~~  128 (391)
                      ||.|. |++.|.+++-|.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            67888 8888888888888886

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.00079  Score=38.51  Aligned_cols=29  Identities=21%  Similarity=0.558  Sum_probs=23.1

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHH-HHhcC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHF-SRKHG   78 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~-~~H~~   78 (391)
                      +||.|+.++|     .|.|++.+.-.+|+ |+|..
T Consensus         1 kPY~C~~~gC-----~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGC-----SKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTC-----CCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCCh-----hhhhcchhhhhhhccccccC
Confidence            5788888888     88888888888886 77754

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0017  Score=36.20  Aligned_cols=23  Identities=17%  Similarity=0.576  Sum_probs=12.8

Q ss_pred             CccCCcCccccCChhHHHHHHhh
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      ||.|..|...|..+.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            45555555555555555555554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0024  Score=35.53  Aligned_cols=25  Identities=28%  Similarity=0.646  Sum_probs=23.8

Q ss_pred             ceeccccccccCChhhHHHHHHhcC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      .|.|+.|+......+-|+.|+|.|+
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             CccccccCcccCCHHHHHHHHHHhc
Confidence            4899999999999999999999998

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0022  Score=37.84  Aligned_cols=32  Identities=25%  Similarity=0.443  Sum_probs=26.3

Q ss_pred             eeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           46 VYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        46 ~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      .|.|.+.+|...  ++.|.....|..|+|+|++|
T Consensus         2 ~y~C~W~~C~R~--~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRE--LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTT--TCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCC--CCcchhHHHHHHHHhhcCCC
Confidence            578888778443  56799999999999999986

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0017  Score=36.32  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=24.0

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||+|..|...-...++|+.|+++.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            79999999999999999999998764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.002  Score=35.98  Aligned_cols=26  Identities=31%  Similarity=0.548  Sum_probs=15.5

Q ss_pred             CCccCCcCccccCChhHHHHHHhh-cC
Q 016352           80 KKWKCEKCSKKYAVQSDWKAHSKT-CG  105 (391)
Q Consensus        80 kp~~C~~C~k~F~~~~~L~~H~~~-~g  105 (391)
                      +||+|+.|.....+.++|..|++. |+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            356666666666666666666655 44

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.94  E-value=0.0035  Score=33.96  Aligned_cols=26  Identities=31%  Similarity=0.560  Sum_probs=21.2

Q ss_pred             ecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352           48 VCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus        48 ~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      +|+.  |     .+.|.++..|+-|-|.|+||+
T Consensus         2 qcp~--c-----~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--C-----HKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--T-----CCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--h-----HHHHHHhHhhhhccccccCCC
Confidence            5777  8     888888888888888888875

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.92  E-value=0.0016  Score=35.64  Aligned_cols=23  Identities=22%  Similarity=0.348  Sum_probs=21.1

Q ss_pred             CccCCccccccCCchhHHhhhhc
Q 016352          183 PFNTMAAASIFESSNNNLQQSAA  205 (391)
Q Consensus       183 p~~C~~C~~~F~~~~~L~~H~~~  205 (391)
                      ||+|..||+.+-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999753

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.91  E-value=0.0014  Score=37.50  Aligned_cols=26  Identities=8%  Similarity=0.189  Sum_probs=23.0

Q ss_pred             CccCCccccccCCchhHHhhhhccCC
Q 016352          183 PFNTMAAASIFESSNNNLQQSAAASA  208 (391)
Q Consensus       183 p~~C~~C~~~F~~~~~L~~H~~~~~~  208 (391)
                      ||.|.+|++.|+++.-|.+|...-++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            79999999999999999999965443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.79  E-value=0.0026  Score=38.65  Aligned_cols=27  Identities=26%  Similarity=0.603  Sum_probs=25.3

Q ss_pred             CCceeccccccccCChhhHHHHHHhcC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      .+.|+|.+|++.|.+-..|-=|++.|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhc
Confidence            468999999999999999999999996

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0036  Score=37.75  Aligned_cols=26  Identities=27%  Similarity=0.657  Sum_probs=22.0

Q ss_pred             CCCceecC---CCCcccChhHHHHHHHHh
Q 016352          105 GTKEYKCD---CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus       105 gek~~~C~---C~k~F~~~~~L~~H~~~h  130 (391)
                      .+|||.|.   |+.+|.+.+.|..|+..|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            47899994   999999999999999755

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.65  E-value=0.0029  Score=34.57  Aligned_cols=23  Identities=35%  Similarity=0.635  Sum_probs=21.1

Q ss_pred             ceeccccccccCChhhHHHHHHh
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRG   27 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~   27 (391)
                      ||+|..|||.|-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999754

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.55  E-value=0.0031  Score=35.15  Aligned_cols=26  Identities=35%  Similarity=0.660  Sum_probs=23.7

Q ss_pred             Cceecc--ccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCE--ICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~--~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |||.|.  -|.|.|.+...|.+|..+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~tht   28 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHT   28 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhcccc
Confidence            689996  59999999999999999986

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.006  Score=36.75  Aligned_cols=30  Identities=13%  Similarity=0.515  Sum_probs=27.0

Q ss_pred             CCceeecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352           43 RKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        43 ~~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      .++||.|..++|     +..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC-----~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGC-----GQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTT-----CCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCc-----cccccchHHHHHhhhhhe
Confidence            478999999999     999999999999988875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.0074  Score=33.58  Aligned_cols=25  Identities=24%  Similarity=0.502  Sum_probs=22.7

Q ss_pred             CceeccccccccCChhhHHHHHHhc
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGH   28 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H   28 (391)
                      +||+|+.|..-.++.++|..|++.-
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            6999999999999999999998754

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.73  E-value=0.0076  Score=34.30  Aligned_cols=21  Identities=33%  Similarity=0.762  Sum_probs=15.8

Q ss_pred             CceecC---CCCcccChhHHHHHH
Q 016352          107 KEYKCD---CGTIFSRRDSFITHR  127 (391)
Q Consensus       107 k~~~C~---C~k~F~~~~~L~~H~  127 (391)
                      |||.|.   |.|.|+..+..-.|+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhc
Confidence            577775   778887777777776

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.67  E-value=0.0051  Score=32.77  Aligned_cols=22  Identities=9%  Similarity=0.237  Sum_probs=20.7

Q ss_pred             CccCCccccccCCchhHHhhhh
Q 016352          183 PFNTMAAASIFESSNNNLQQSA  204 (391)
Q Consensus       183 p~~C~~C~~~F~~~~~L~~H~~  204 (391)
                      ||+|..|...|..+..|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999984

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=94.66  E-value=0.0097  Score=31.66  Aligned_cols=23  Identities=22%  Similarity=0.569  Sum_probs=15.1

Q ss_pred             eecCCCCCCCCCCCCccCCHHHHHHHHHHh
Q 016352           47 YVCPEPSCVHHNPARALGDLTGIKKHFSRK   76 (391)
Q Consensus        47 ~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H   76 (391)
                      |+|..  |     .+.|..++.|.+|+|.|
T Consensus         1 ykcgl--c-----ersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGL--C-----ERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSS--S-----CCBCSSHHHHHHHGGGT
T ss_pred             Ccccc--h-----HHHHHHHHHHHHHHHhh
Confidence            45666  6     66666666666666665

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.56  E-value=0.01  Score=31.57  Aligned_cols=23  Identities=26%  Similarity=0.599  Sum_probs=21.2

Q ss_pred             CceeccccccccCChhhHHHHHH
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRR   26 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~   26 (391)
                      .||+|.-|...|-.+..|+.|+-
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            38999999999999999999974

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.24  E-value=0.024  Score=31.33  Aligned_cols=29  Identities=21%  Similarity=0.586  Sum_probs=23.4

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +..|.|..  |     ...|...-.|..|+-.|+||
T Consensus         2 eqvftcs~--c-----qe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSV--C-----QETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSS--S-----CCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHH--H-----HHHHHHHHhheeeeecccCC
Confidence            45688888  8     88888888888888888875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.05  E-value=0.023  Score=34.30  Aligned_cols=30  Identities=20%  Similarity=0.536  Sum_probs=24.8

Q ss_pred             CceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCCC
Q 016352           44 KRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEK   80 (391)
Q Consensus        44 ~~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~ek   80 (391)
                      .+.|+|.+  |     ++.|.+-..|--|++.|..++
T Consensus         3 ~r~~~C~~--C-----~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSF--C-----KREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTT--T-----CCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCC--C-----CCccCCcccccchHhhhcchH
Confidence            45688998  8     899999999999998887654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.016  Score=36.57  Aligned_cols=26  Identities=27%  Similarity=0.590  Sum_probs=23.7

Q ss_pred             CceeccccccccCChhhHHHHHHhcC
Q 016352            4 NRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         4 kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      --|.|-.|+|.|.....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999999984

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.95  E-value=0.033  Score=30.44  Aligned_cols=25  Identities=24%  Similarity=0.421  Sum_probs=23.1

Q ss_pred             ceeccccccccCChhhHHHHHHhcC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |-+|..|.++...+..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999994

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.92  E-value=0.033  Score=29.66  Aligned_cols=22  Identities=32%  Similarity=0.709  Sum_probs=20.6

Q ss_pred             eeccccccccCChhhHHHHHHh
Q 016352            6 FVCEICNKGFQRDQNLQLHRRG   27 (391)
Q Consensus         6 f~C~~C~k~F~~~~~L~~H~~~   27 (391)
                      |.|+.|-|.|.++.++..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            8999999999999999999875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.92  E-value=0.026  Score=30.04  Aligned_cols=22  Identities=27%  Similarity=0.626  Sum_probs=12.8

Q ss_pred             ccCCcCccccCChhHHHHHHhh
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |.|+.|-|.|+++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4555666666666666555554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.70  E-value=0.042  Score=31.86  Aligned_cols=26  Identities=31%  Similarity=0.589  Sum_probs=23.1

Q ss_pred             ceeccccccccCChhhHHHHHHhcCC
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGHNL   30 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H~~   30 (391)
                      .|+|..|+|.|.+...+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            59999999999999999999877653

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.72  E-value=0.067  Score=30.07  Aligned_cols=30  Identities=27%  Similarity=0.609  Sum_probs=27.2

Q ss_pred             ceeecCCCCCCCCCCCCccCCHHHHHHHHHHhcCC
Q 016352           45 RVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGE   79 (391)
Q Consensus        45 ~~~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~~e   79 (391)
                      +.|.|..+.|     +-.|...-.|..|+-.|+||
T Consensus         2 k~~iCsf~dC-----~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADC-----GAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGG-----CCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCc-----chhhccchhhhHHhhhhcCC
Confidence            5689999999     99999999999999999986

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.65  E-value=0.056  Score=29.42  Aligned_cols=24  Identities=29%  Similarity=0.678  Sum_probs=21.8

Q ss_pred             ceeccccccccCChhhHHHHHHhc
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H   28 (391)
                      .|+|++|+....+++.|..|++.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            589999999999999999998754

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.04  E-value=0.065  Score=29.17  Aligned_cols=22  Identities=27%  Similarity=0.596  Sum_probs=10.1

Q ss_pred             ccCCcCccccCChhHHHHHHhh
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |.|+.|+....+++.|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            3444444444444444444443

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.94  E-value=0.035  Score=32.24  Aligned_cols=25  Identities=12%  Similarity=0.209  Sum_probs=21.8

Q ss_pred             CccCCccccccCCchhHHhhhhccC
Q 016352          183 PFNTMAAASIFESSNNNLQQSAAAS  207 (391)
Q Consensus       183 p~~C~~C~~~F~~~~~L~~H~~~~~  207 (391)
                      .|.|..|++.|.++..+.+|-....
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            5899999999999999999985544

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.76  E-value=0.07  Score=33.57  Aligned_cols=23  Identities=26%  Similarity=0.634  Sum_probs=20.5

Q ss_pred             ceecC-CCCcccChhHHHHHHHHh
Q 016352          108 EYKCD-CGTIFSRRDSFITHRAFC  130 (391)
Q Consensus       108 ~~~C~-C~k~F~~~~~L~~H~~~h  130 (391)
                      -|.|. |+|.|.....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            48899 999999999999999864

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.33  E-value=0.15  Score=29.63  Aligned_cols=28  Identities=14%  Similarity=0.447  Sum_probs=24.0

Q ss_pred             CCCceeccccccccCChhhHHHHHHhcC
Q 016352            2 ATNRFVCEICNKGFQRDQNLQLHRRGHN   29 (391)
Q Consensus         2 g~kpf~C~~C~k~F~~~~~L~~H~~~H~   29 (391)
                      |+..|.|.+|.+.|...+++-+|..+.+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            4668999999999999999999965543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.98  E-value=0.38  Score=25.83  Aligned_cols=26  Identities=27%  Similarity=0.503  Sum_probs=21.4

Q ss_pred             eecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352           47 YVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        47 ~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      |.|...+|     ++.|.....|+-|+-+|+
T Consensus         2 yvchfe~c-----~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENC-----GKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTC-----CCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCc-----hHHHhhccceEEEeeccc
Confidence            67877778     899988888888887775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.58  E-value=0.47  Score=25.72  Aligned_cols=24  Identities=17%  Similarity=0.329  Sum_probs=15.4

Q ss_pred             eecCCCCCCCCCCCCccCCHHHHHHHHHHhc
Q 016352           47 YVCPEPSCVHHNPARALGDLTGIKKHFSRKH   77 (391)
Q Consensus        47 ~~C~~~~C~~~~~~k~F~~~~~L~~H~~~H~   77 (391)
                      -+|++  |     .....++..|+-|.|+|-
T Consensus         3 ekc~e--c-----syscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSE--C-----SYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSS--S-----SCEESSHHHHHHHHGGGC
T ss_pred             ccCcc--c-----ccccCcHHHHHHhhcccc
Confidence            45666  6     666666666666666663

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.27  E-value=0.58  Score=25.68  Aligned_cols=22  Identities=23%  Similarity=0.531  Sum_probs=12.9

Q ss_pred             ccCCcCccccCChhHHHHHHhh
Q 016352           82 WKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |.|..|+|...+...++.|.-.
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            5566666666666666655544

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=83.17  E-value=0.3  Score=27.89  Aligned_cols=23  Identities=17%  Similarity=0.198  Sum_probs=20.6

Q ss_pred             CCccCCccccccCCchhHHhhhh
Q 016352          182 KPFNTMAAASIFESSNNNLQQSA  204 (391)
Q Consensus       182 kp~~C~~C~~~F~~~~~L~~H~~  204 (391)
                      ..|.|.-||.+|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45999999999999999999973

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.17  E-value=0.55  Score=25.18  Aligned_cols=21  Identities=29%  Similarity=0.801  Sum_probs=16.4

Q ss_pred             eecC---CCCcccChhHHHHHHHH
Q 016352          109 YKCD---CGTIFSRRDSFITHRAF  129 (391)
Q Consensus       109 ~~C~---C~k~F~~~~~L~~H~~~  129 (391)
                      |.|.   |+|.|.....|+.|+-.
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~   25 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFS   25 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeec
Confidence            6774   88888888888888754

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.97  E-value=0.52  Score=29.35  Aligned_cols=23  Identities=13%  Similarity=0.247  Sum_probs=10.0

Q ss_pred             CccCCcCccccCChhHHHHHHhh
Q 016352           81 KWKCEKCSKKYAVQSDWKAHSKT  103 (391)
Q Consensus        81 p~~C~~C~k~F~~~~~L~~H~~~  103 (391)
                      |-.|++|+....+..+|.+|+..
T Consensus        24 patcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          24 PATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHH
Confidence            34444444444444444444443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.91  E-value=0.67  Score=25.18  Aligned_cols=24  Identities=25%  Similarity=0.761  Sum_probs=19.5

Q ss_pred             ecCCCCCCCCCCCCccCCHHHHHHHHHHh
Q 016352           48 VCPEPSCVHHNPARALGDLTGIKKHFSRK   76 (391)
Q Consensus        48 ~C~~~~C~~~~~~k~F~~~~~L~~H~~~H   76 (391)
                      .|+.-+|     .|.|...+.+.+|+-+|
T Consensus         3 ~CphkgC-----~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGC-----TKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTC-----CCEESSHHHHHHHHGGG
T ss_pred             cCCcccH-----HHHhhchHHHHHHhhcc
Confidence            4666667     99999999999988776

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=80.59  E-value=0.55  Score=26.75  Aligned_cols=20  Identities=25%  Similarity=0.600  Sum_probs=10.7

Q ss_pred             ccCCcCccccCChhHHHHHH
Q 016352           82 WKCEKCSKKYAVQSDWKAHS  101 (391)
Q Consensus        82 ~~C~~C~k~F~~~~~L~~H~  101 (391)
                      |.|.-||-+|...+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            45555555555555555554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.43  E-value=0.52  Score=31.53  Aligned_cols=28  Identities=25%  Similarity=0.497  Sum_probs=25.4

Q ss_pred             CCceeccccccccCChhhHHHHHHhcCC
Q 016352            3 TNRFVCEICNKGFQRDQNLQLHRRGHNL   30 (391)
Q Consensus         3 ~kpf~C~~C~k~F~~~~~L~~H~~~H~~   30 (391)
                      ..-|+|.+|+-.|.....|..|+..|.+
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            4569999999999999999999999973

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.42  E-value=0.54  Score=25.79  Aligned_cols=24  Identities=21%  Similarity=0.513  Sum_probs=20.9

Q ss_pred             ceeccccccccCChhhHHHHHHhc
Q 016352            5 RFVCEICNKGFQRDQNLQLHRRGH   28 (391)
Q Consensus         5 pf~C~~C~k~F~~~~~L~~H~~~H   28 (391)
                      .|.|.+|+|..++...++-|+...
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEeec
Confidence            589999999999999999996543