Citrus Sinensis ID: 016359

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

MDLSKVTLEIFNKLEQKWLAHCEPTKRTRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKPFALTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGPLISGSGPCERKPRSNGECSTSSVVDIVLDGVSETIDQMLGNAFCWNRADYVRIQVNGLISEGVVGPRMEAEVLKERGVESLPFGGKRLLTETNGQRIESFVQRLAASGKTSLPPSPCKESAVSLLSNGR

ccccHHHHHHHHHHHHHHccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccEEEEEccccccccEEEEccccccccccccHHHHHHHHHcccccccccEEEEccccccEEEEcccccccccHHHHHHHHHHHHccccccccccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccc

ccHcHHHHHHHHHHHHccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccEEEEcccccccHHHHHHHHHHHHHHHccccccccccccEEEEcEEHHccccEEEEcccccccccccccHHHHHHHccccccccccEEEEcccccEEEEEEcccHEcccHHHHHHHHHHHcccccccccccccEEEEEEccccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccccc

MDLSKVTLEIFNKLEQKWlahceptkrtrvlsidgggttGIVAGAALIHLEdqirlktgdphaqiaDFFDIIAGTGIGALLASMLvaddgsgrplftaRDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFmrddgkvltlkdtckpllvpcfdlnssapfvfsradasespsfnFELWKAcratsatpsmfkpfaltsvdgktsctavdgglvmnnptAAAVTHVlhnkrdfpsvngvEDLLVLSlgngplisgsgpcerkprsngecstssVVDIVLDGVSETIDQMLGNafcwnradYVRIQVNGlisegvvgprmEAEVLKergveslpfggkrlltetNGQRIESFVQRLAasgktslppspckeSAVSLLSNGR

MDLSKVTLEIFNKLEqkwlahceptkRTRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSelfnagfsagflrrkrrfsgksmDKVLKEifmrddgkvlTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKPFALTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGPLIsgsgpcerkprsngecstssVVDIVLDGVSETIDQMLGNAFCWNRADYVRIQVNGLISEGVVGPRMEAEVLKergveslpfggkrlltetnGQRIESFVQRLAAsgktslppspckesavsllsngr

MDLSKVTLEIFNKLEQKWLAHCEPTKRTRVLSIDgggttgivagaaLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKPFALTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGPLISGSGPCERKPRSNGECSTSSVVDIVLDGVSETIDQMLGNAFCWNRADYVRIQVNGLISEGVVGPRMEAEVLKERGVESLPFGGKRLLTETNGQRIESFVQRLAASGKTSLPPSPCKESAVSLLSNGR

*****VTLEIFNKLEQKWLAHCEPTKRTRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRAD****PSFNFELWKACRATSATPSMFKPFALTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGPLI*******************SVVDIVLDGVSETIDQMLGNAFCWNRADYVRIQVNGLISEGVVGPRMEAEVLKERGVESLPFGGKRLL****************************************

***SKVTLEIFNK**************TRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKPFALTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGPLISGSGPCERKPRSNGECSTSSVVDIVLDGVSETIDQMLGNAFCWNRADYVRIQVNGLISEGVVGPRMEAEVLKERGVESLPFGGKRLLTETNGQRIESFVQRL*************************

MDLSKVTLEIFNKLEQKWLAHCEPTKRTRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKPFALTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGPLISGS***************SSVVDIVLDGVSETIDQMLGNAFCWNRADYVRIQVNGLISEGVVGPRMEAEVLKERGVESLPFGGKRLLTETNGQRIESFVQRLA************************

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		390	2.2.26 [Sep-21-2011]
Q2MY58		387	Patatin group A-3 OS=Sola	N/A	no	0.828	0.834	0.259	2e-24
Q41487		386	Patatin-16 OS=Solanum tub	N/A	no	0.774	0.782	0.241	8e-19
Q2MY56		387	Patatin group D-2 OS=Sola	N/A	no	0.784	0.790	0.248	2e-18
Q2MY43		387	Patatin-08 OS=Solanum tub	N/A	no	0.784	0.790	0.245	7e-18
Q2MY50		387	Patatin-01 OS=Solanum tub	N/A	no	0.776	0.782	0.238	9e-18
Q2MY60		387	Patatin-02 OS=Solanum tub	N/A	no	0.776	0.782	0.238	9e-18
Q3YJT4		375	Patatin-1-Kuras 2 OS=Sola	N/A	no	0.776	0.808	0.238	9e-18
Q2MY59		387	Patatin group A-2 OS=Sola	N/A	no	0.776	0.782	0.235	4e-17
Q2MY55		387	Patatin group D-3 OS=Sola	N/A	no	0.784	0.790	0.242	4e-17
Q2MY40		387	Patatin-11 OS=Solanum tub	N/A	no	0.571	0.576	0.279	9e-16

>sp\|Q2MY58\|PATA3_SOLTU Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1	Back alignment and function desciption

 Score =  113 bits (283), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 167/355 (47%), Gaps = 32/355 (9%)

Query: 30  VLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADD 89
           VLSIDGGG  GI+ G  L  LE Q++    +  A++AD+FD+I GT  G LL +M+   +
Sbjct: 31  VLSIDGGGVKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPN 90

Query: 90  GSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVL 149
            + RP   A + +         +FN+     F     ++ GK + +VL+E      G+  
Sbjct: 91  ENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF---GPKYDGKYLMQVLQEKL----GET- 142

Query: 150 TLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FAL 207
            +      + +  FD+ ++ P +F++++ ++SP  + +++  C +T+A P+ F P  FA 
Sbjct: 143 RVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFAT 202

Query: 208 TSVDG-KTSCTAVDGGL-VMNNPTAAAVTHVLHNKRDFPSVNGVEDL-----LVLSLGNG 260
            +++G K     VDG +  + +P   +V+      ++ P+   +  L     L+LSLG G
Sbjct: 203 NTINGDKYEFNLVDGAVATVADPALLSVSVATRRAQEDPAFASIRSLNYKKMLLLSLGTG 262

Query: 261 PL--ISGSGPCERKPRSNGECSTSSVVDIVLDGVSETI-DQMLGNAF--CWNRADYVRIQ 315
                  +   E   +  G      V+  + +  S  + D  L   F    ++ +Y+R+Q
Sbjct: 263 TTSEFDKTHTAEETAKW-GALQWMLVIQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQ 321

Query: 316 VNGLISEGVVGPRMEAEVLKERGVESLPFGGKRLL----TETNGQRIESFVQRLA 366
            N L      G   +A+   E  +E L   G+ LL    ++ N +  E  ++R A
Sbjct: 322 ENAL-----TGTTTKADDASEANMELLAQVGENLLKKPVSKDNPETYEEALKRFA 371

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.
Solanum tuberosum (taxid: 4113)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp\|Q41487\|PAT16_SOLTU Patatin-16 OS=Solanum tuberosum PE=2 SV=1	Back alignment and function description

>sp\|Q2MY56\|PATD2_SOLTU Patatin group D-2 OS=Solanum tuberosum PE=2 SV=1	Back alignment and function description

>sp\|Q2MY43\|PAT08_SOLTU Patatin-08 OS=Solanum tuberosum PE=2 SV=1	Back alignment and function description

>sp\|Q2MY50\|PAT01_SOLTU Patatin-01 OS=Solanum tuberosum PE=2 SV=1	Back alignment and function description

>sp\|Q2MY60\|PAT02_SOLTU Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 PE=2 SV=1	Back alignment and function description

>sp\|Q3YJT4\|PT1K2_SOLTU Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 PE=1 SV=1	Back alignment and function description

>sp\|Q2MY59\|PATA2_SOLTU Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1	Back alignment and function description

>sp\|Q2MY55\|PATD3_SOLTU Patatin group D-3 OS=Solanum tuberosum PE=2 SV=1	Back alignment and function description

>sp\|Q2MY40\|PAT11_SOLTU Patatin-11 OS=Solanum tuberosum PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		390
224085469		378	predicted protein [Populus trichocarpa]	0.969	1.0	0.817	1e-179
255559440		389	Patatin T5 precursor, putative [Ricinus	0.992	0.994	0.770	1e-174
18412659		384	PATATIN-like protein 9 [Arabidopsis thal	0.979	0.994	0.741	1e-170
224062505		381	predicted protein [Populus trichocarpa]	0.966	0.989	0.807	1e-170
7523402		382	putative protein [Arabidopsis thaliana]	0.979	1.0	0.741	1e-170
225437010		385	PREDICTED: patatin group A-3 [Vitis vini	0.987	1.0	0.779	1e-169
297817660		384	hypothetical protein ARALYDRAFT_907903 [	0.979	0.994	0.738	1e-168
296085194		363	unnamed protein product [Vitis vinifera]	0.930	1.0	0.753	1e-167
449462332		374	PREDICTED: patatin group A-3-like [Cucum	0.948	0.989	0.771	1e-163
147805938		385	hypothetical protein VITISV_002575 [Viti	0.987	1.0	0.779	1e-163

>gi\|224085469\|ref\|XP_002307585.1\| predicted protein [Populus trichocarpa] gi\|222857034\|gb\|EEE94581.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 319/390 (81%), Positives = 340/390 (87%), Gaps = 12/390 (3%)

Query: 1   MDLSKVTLEIFNKLEQKWLAHCEPTKRTRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGD 60
           MDLSK TLEIF+KLEQKWL+HCE TK+TRVLSIDGGGTTGIVA AALIHLEDQIR KTGD
Sbjct: 1   MDLSKATLEIFSKLEQKWLSHCETTKKTRVLSIDGGGTTGIVAAAALIHLEDQIRFKTGD 60

Query: 61  PHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAG 120
           P A+IADFFDIIAGTGIGALLA+ML ADDGSGRPLFTARDA+  +  +NS+LF A    G
Sbjct: 61  PQARIADFFDIIAGTGIGALLATMLAADDGSGRPLFTARDAVAFVADKNSDLFKAKH-GG 119

Query: 121 FLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASE 180
           FL R+RRFSGKSMD+VLKE   RDDG  LTLKDTCKPLLVPCFDL SSAPFVFSRADA+E
Sbjct: 120 FLLRRRRFSGKSMDRVLKEALKRDDGASLTLKDTCKPLLVPCFDLKSSAPFVFSRADATE 179

Query: 181 SPSFNFELWKACRATSATPSMFKPFALTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNK 240
           SPSFNFELWK CRATSATPS+FKPF LTSVDGKTSC+A+DGGLVMNNPTAAAVTHVLHNK
Sbjct: 180 SPSFNFELWKVCRATSATPSLFKPFNLTSVDGKTSCSAIDGGLVMNNPTAAAVTHVLHNK 239

Query: 241 RDFPSVNGVEDLLVLSLGNGPLISGSGPCERKPRSNGECSTSSVVDIVLDGVSETIDQML 300
           RDFP+VNGVEDLLVLSLGNG   SGS    RK R NGECSTSSVVDIVLDGVSET+DQML
Sbjct: 240 RDFPTVNGVEDLLVLSLGNG---SGS-LTGRKLRHNGECSTSSVVDIVLDGVSETVDQML 295

Query: 301 GNAFCWNRADYVRIQVNGLISEGVVGPRMEAEVLKERGVESLPFGGKRLLTETNGQRIES 360
           GNAFCWNR DYVRIQ NGL S       +E EVLKERGVE+LPFGGKRLLTETN  RIES
Sbjct: 296 GNAFCWNRNDYVRIQANGLAS-------VEEEVLKERGVETLPFGGKRLLTETNAGRIES 348

Query: 361 FVQRLAASGKTSLPPSPCKESAVSLLSNGR 390
           FVQRL ASGK+SLPPSPCK SAVS L+N R
Sbjct: 349 FVQRLVASGKSSLPPSPCKNSAVSPLANSR 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255559440\|ref\|XP_002520740.1\| Patatin T5 precursor, putative [Ricinus communis] gi\|223540125\|gb\|EEF41702.1\| Patatin T5 precursor, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|18412659\|ref\|NP_567142.1\| PATATIN-like protein 9 [Arabidopsis thaliana] gi\|15912227\|gb\|AAL08247.1\| AT3g63200/F16M2_50 [Arabidopsis thaliana] gi\|24111291\|gb\|AAN46769.1\| At3g63200/F16M2_50 [Arabidopsis thaliana] gi\|332646926\|gb\|AEE80447.1\| PATATIN-like protein 9 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|224062505\|ref\|XP_002300844.1\| predicted protein [Populus trichocarpa] gi\|222842570\|gb\|EEE80117.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|7523402\|emb\|CAB86421.1\| putative protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|225437010\|ref\|XP_002277881.1\| PREDICTED: patatin group A-3 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297817660\|ref\|XP_002876713.1\| hypothetical protein ARALYDRAFT_907903 [Arabidopsis lyrata subsp. lyrata] gi\|297322551\|gb\|EFH52972.1\| hypothetical protein ARALYDRAFT_907903 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|296085194\|emb\|CBI28689.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449462332\|ref\|XP_004148895.1\| PREDICTED: patatin group A-3-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|147805938\|emb\|CAN67759.1\| hypothetical protein VITISV_002575 [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		390
TAIR\|locus:2077269		384	PLP9 "PATATIN-like protein 9"	0.979	0.994	0.715	6.9e-150
TAIR\|locus:2056088		499	PLP6 "PATATIN-like protein 6"	0.825	0.645	0.429	1.1e-70
TAIR\|locus:2082702		488	pPLAIIIbeta "patatin-related p	0.907	0.725	0.416	2.9e-64
TAIR\|locus:2114995		414	PLP1 [Arabidopsis thaliana (ta	0.587	0.553	0.304	2e-22
TAIR\|locus:2158337		401	AT5G43590 [Arabidopsis thalian	0.815	0.793	0.260	2e-21
TAIR\|locus:2115065		428	PLP4 "AT4G37050" [Arabidopsis	0.835	0.761	0.258	6e-21
TAIR\|locus:2066286		407	PLA2A "phospholipase A 2A" [Ar	0.584	0.560	0.295	1.4e-16
UNIPROTKB\|Q9KVG8		355	VC0178 "Patatin-related protei	0.553	0.608	0.288	2.8e-11
TIGR_CMR\|VC_0178		355	VC_0178 "patatin family protei	0.553	0.608	0.288	2.8e-11
WB\|WBGene00022233		546	Y73B6BL.4 [Caenorhabditis eleg	0.8	0.571	0.237	6e-07

TAIR\|locus:2077269 PLP9 "PATATIN-like protein 9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
 Identities = 279/390 (71%), Positives = 328/390 (84%)

Query:     1 MDLSKVTLEIFNKLEQKWLAHCEPTKRTRVLSIDXXXXXXXXXXXXLIHLEDQIRLKTGD 60
             MDLSKVTL+IF KLEQKWL+HC+ +++TR+LSID            ++HLE QIRL+TGD
Sbjct:     3 MDLSKVTLDIFTKLEQKWLSHCDSSRKTRILSIDGGGTTGIVAAASILHLEHQIRLQTGD 62

Query:    61 PHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAG 120
             PHA I+DFFDI+AGTGIG +LA++LVADDGSGRP+FTARDA+  +  +NSELF   ++ G
Sbjct:    63 PHAHISDFFDIVAGTGIGGILAALLVADDGSGRPMFTARDAVKFVAEKNSELFEIRYT-G 121

Query:   121 FLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASE 180
               RR +R+SGKSM++VL+  F R+DGKVLT+KDTCKPLLVPC+DL +SAPFVFSRA ASE
Sbjct:   122 VFRRNKRYSGKSMERVLETAFRREDGKVLTMKDTCKPLLVPCYDLKTSAPFVFSRAGASE 181

Query:   181 SPSFNFELWKACRATSATPSMFKPFALTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNK 240
             SPSF+FELWK CRATSATPS+FKPF++ SVDGKTSC+AVDGGLVMNNPTAAAVTHVLHNK
Sbjct:   182 SPSFDFELWKVCRATSATPSLFKPFSVVSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNK 241

Query:   241 RDFPSVNGVEDLLVLSLGNGPLISGSGPCERKPRSNGECSTSSVVDIVLDGVSETIDQML 300
             RDFPSVNGV+DLLVLSLGNGP    S P  RK R NG+ STSSVVDIV+DGVS+T+DQML
Sbjct:   242 RDFPSVNGVDDLLVLSLGNGPSTMSSSP-GRKLRRNGDYSTSSVVDIVVDGVSDTVDQML 300

Query:   301 GNAFCWNRADYVRIQVNGLISEGVVGPRMEAEVLKERGVESLPFGGKRLLTETNGQRIES 360
             GNAFCWNR DYVRIQ NGL S G        E+LKERGVE+ PFG KR+LTE+NG+RIE 
Sbjct:   301 GNAFCWNRTDYVRIQANGLTSGGA------EELLKERGVETAPFGVKRILTESNGERIEG 354

Query:   361 FVQRLAASGKTSLPPSPCKESAVSLLSNGR 390
             FVQRL ASGK+SLPPSPCKESAV+ L++GR
Sbjct:   355 FVQRLVASGKSSLPPSPCKESAVNPLADGR 384

GO:0005576 "extracellular region" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR\|locus:2056088 PLP6 "PATATIN-like protein 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2082702 pPLAIIIbeta "patatin-related phospholipase IIIbeta" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2114995 PLP1 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2158337 AT5G43590 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2115065 PLP4 "AT4G37050" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2066286 PLA2A "phospholipase A 2A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9KVG8 VC0178 "Patatin-related protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]	Back alignment and assigned GO terms

TIGR_CMR\|VC_0178 VC_0178 "patatin family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]	Back alignment and assigned GO terms

WB\|WBGene00022233 Y73B6BL.4 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_V0494	hypothetical protein (379 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		390
cd07199		258	cd07199, Pat17_PNPLA8_PNPLA9_like, Patatin-like ph	7e-61
cd07215		329	cd07215, Pat17_PNPLA8_PNPLA9_like2, Patatin-like p	6e-57
cd07214		349	cd07214, Pat17_isozyme_like, Patatin-like phosphol	7e-43
COG3621		394	COG3621, COG3621, Patatin [General function predic	1e-22
cd07213		288	cd07213, Pat17_PNPLA8_PNPLA9_like1, Patatin-like p	1e-19
pfam01734		189	pfam01734, Patatin, Patatin-like phospholipase	4e-19
cd07216		309	cd07216, Pat17_PNPLA8_PNPLA9_like3, Patatin-like p	4e-16
cd07212		312	cd07212, Pat_PNPLA9, Patatin-like phospholipase do	8e-16
cd07211		308	cd07211, Pat_PNPLA8, Patatin-like phospholipase do	2e-15
cd07217		344	cd07217, Pat17_PNPLA8_PNPLA9_like4, Patatin-like p	2e-14
cd07207		194	cd07207, Pat_ExoU_VipD_like, ExoU and VipD-like pr	1e-12
cd07205		175	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like	2e-10
COG1752		306	COG1752, RssA, Predicted esterase of the alpha-bet	4e-08
cd07198		172	cd07198, Patatin, Patatin-like phospholipase	8e-04

>gnl\|CDD\|132838 cd07199, Pat17_PNPLA8_PNPLA9_like, Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17	Back alignment and domain information

 Score =  196 bits (501), Expect = 7e-61
 Identities = 85/309 (27%), Positives = 127/309 (41%), Gaps = 64/309 (20%)

Query: 30  VLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADD 89
           +LS+DGGG  GI+    L  LE ++        ++IAD FD+IAGT  G ++A  L    
Sbjct: 1   ILSLDGGGIRGIIPAEILAELEKRLG-----KPSRIADLFDLIAGTSTGGIIALGLAL-- 53

Query: 90  GSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVL 149
                 ++A + ++L      ++F                                    
Sbjct: 54  ----GRYSAEELVELYEELGRKIF------------------------------------ 73

Query: 150 TLKDTCKPLLVPCFDLNSSAPFVFSRADASE-SPSFNFELWKACRATSATPSMFKPFALT 208
                   +LV  +DL++  P VFS  DA E     +F+LW   RATSA P+ F P  + 
Sbjct: 74  ------PRVLVTAYDLSTGKPVVFSNYDAEEPDDDDDFKLWDVARATSAAPTYFPPAVIE 127

Query: 209 SVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGPLISGSGP 268
           S  G      VDGG+  NNP   A+   L            +D+LVLSLG G   S S  
Sbjct: 128 S--GGDEGAFVDGGVAANNPALLALAEALRLL-----APDKDDILVLSLGTGTSPSSSSS 180

Query: 269 CERKPRSNGECSTSSVVDIVLDGVSETIDQMLGNAF--CWNRADYVRIQVNGLISEGVVG 326
             +  R  G      ++DI++D  S+ +DQ L   F    ++ +Y+RI          + 
Sbjct: 181 K-KASRWGGLGWGRPLLDILMDAQSDGVDQWLDLLFGSLDSKDNYLRINPPLPGPIPALD 239

Query: 327 PRMEAEVLK 335
              EA +L 
Sbjct: 240 DASEANLLA 248

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum. Length = 258

>gnl\|CDD\|132854 cd07215, Pat17_PNPLA8_PNPLA9_like2, Patatin-like phospholipase of bacteria	Back alignment and domain information

>gnl\|CDD\|132853 cd07214, Pat17_isozyme_like, Patatin-like phospholipase of plants	Back alignment and domain information

>gnl\|CDD\|226148 COG3621, COG3621, Patatin [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|132852 cd07213, Pat17_PNPLA8_PNPLA9_like1, Patatin-like phospholipase	Back alignment and domain information

>gnl\|CDD\|216671 pfam01734, Patatin, Patatin-like phospholipase	Back alignment and domain information

>gnl\|CDD\|132855 cd07216, Pat17_PNPLA8_PNPLA9_like3, Patatin-like phospholipase	Back alignment and domain information

>gnl\|CDD\|132851 cd07212, Pat_PNPLA9, Patatin-like phospholipase domain containing protein 9	Back alignment and domain information

>gnl\|CDD\|132850 cd07211, Pat_PNPLA8, Patatin-like phospholipase domain containing protein 8	Back alignment and domain information

>gnl\|CDD\|132856 cd07217, Pat17_PNPLA8_PNPLA9_like4, Patatin-like phospholipase	Back alignment and domain information

>gnl\|CDD\|132846 cd07207, Pat_ExoU_VipD_like, ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2	Back alignment and domain information

>gnl\|CDD\|132844 cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1	Back alignment and domain information

>gnl\|CDD\|224666 COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|132837 cd07198, Patatin, Patatin-like phospholipase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		390
cd07215		329	Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipa	100.0
cd07214		349	Pat17_isozyme_like Patatin-like phospholipase of p	100.0
cd07211		308	Pat_PNPLA8 Patatin-like phospholipase domain conta	100.0
cd07216		309	Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipa	100.0
cd07213		288	Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipa	100.0
cd07217		344	Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipa	100.0
cd07212		312	Pat_PNPLA9 Patatin-like phospholipase domain conta	100.0
cd07199		258	Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipas	100.0
KOG4231		763	consensus Intracellular membrane-bound Ca2+-indepe	100.0
COG3621		394	Patatin [General function prediction only]	100.0
cd07205		175	Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi	100.0
cd07207		194	Pat_ExoU_VipD_like ExoU and VipD-like proteins; ho	100.0
KOG0513		503	consensus Ca2+-independent phospholipase A2 [Lipid	100.0
cd07228		175	Pat_NTE_like_bacteria Bacterial patatin-like phosp	99.97
cd07210		221	Pat_hypo_W_succinogenes_WS1459_like Hypothetical p	99.97
cd07225		306	Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai	99.97
cd07227		269	Pat_Fungal_NTE1 Fungal patatin-like phospholipase	99.97
cd07209		215	Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim	99.96
cd07208		266	Pat_hypo_Ecoli_yjju_like Hypothetical patatin simi	99.96
PRK10279		300	hypothetical protein; Provisional	99.95
cd07198		172	Patatin Patatin-like phospholipase. Patatin is a s	99.94
cd07218		245	Pat_iPLA2 Calcium-independent phospholipase A2; Cl	99.92
cd07222		246	Pat_PNPLA4 Patatin-like phospholipase domain conta	99.92
cd07204		243	Pat_PNPLA_like Patatin-like phospholipase domain c	99.92
COG1752		306	RssA Predicted esterase of the alpha-beta hydrolas	99.91
cd07230		421	Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TG	99.91
cd07221		252	Pat_PNPLA3 Patatin-like phospholipase domain conta	99.91
cd07219		382	Pat_PNPLA1 Patatin-like phospholipase domain conta	99.9
PF01734		204	Patatin: Patatin-like phospholipase This Prosite f	99.9
cd07232		407	Pat_PLPL Patain-like phospholipase. Patatin-like p	99.9
cd07220		249	Pat_PNPLA2 Patatin-like phospholipase domain conta	99.89
cd07224		233	Pat_like Patatin-like phospholipase. Patatin-like	99.87
COG4667		292	Predicted esterase of the alpha-beta hydrolase sup	99.82
cd07206		298	Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and	99.82
cd07223		405	Pat_PNPLA5-mammals Patatin-like phospholipase doma	99.82
KOG2968		1158	consensus Predicted esterase of the alpha-beta hyd	99.8
cd07229		391	Pat_TGL3_like Triacylglycerol lipase 3. Triacylgly	99.79
cd07231		323	Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar	99.79
cd01819		155	Patatin_and_cPLA2 Patatins and Phospholipases. Pat	99.79
TIGR03607		739	patatin-related protein. This bacterial protein fa	99.78
KOG2214		543	consensus Predicted esterase of the alpha-beta hyd	99.37
KOG0513		503	consensus Ca2+-independent phospholipase A2 [Lipid	99.37
KOG3773		354	consensus Adiponutrin and related vesicular transp	98.72
cd00147		438	cPLA2_like Cytosolic phospholipase A2, catalytic d	97.19
cd07202		430	cPLA2_Grp-IVC Group IVC cytoplasmic phospholipase	93.2
cd07201		541	cPLA2_Grp-IVB-IVD-IVE-IVF Group IVB, IVD, IVE, and	90.08
KOG1325		571	consensus Lysophospholipase [Lipid transport and m	87.82
smart00022		549	PLAc Cytoplasmic phospholipase A2, catalytic subun	86.12
cd07203		552	cPLA2_Fungal_PLB Fungal Phospholipase B-like; cPLA	85.62
PF01735		491	PLA2_B: Lysophospholipase catalytic domain; InterP	84.0
cd07200		505	cPLA2_Grp-IVA Group IVA cytosolic phospholipase A2	82.56

>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria	Back alignment and domain information

Probab=100.00  E-value=4.9e-65  Score=496.04  Aligned_cols=322  Identities=32%  Similarity=0.538  Sum_probs=272.0

Q ss_pred             EEEEEcCCchhHHHHHHHHHHHHHHhhhhcCCCCCCcCccccEEEeccHHHHHHHHHhCCCCCCCCccCHHHHHHHHHHh
Q 016359           29 RVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRR  108 (390)
Q Consensus        29 ~iLsldGGG~RG~~~~~iL~~Le~~l~~~~g~~~~~i~~~fD~i~GTStG~iia~~l~~~~~~g~~~~s~~e~~~~y~~~  108 (390)
                      |||||||||+||++++.||++||+++++..|.|+.+++++||+|+|||||||||++++.+...|++.++++|++++|.+.
T Consensus         1 rILslDGGGirG~~~~~iL~~le~~l~~~~g~~~~~i~~~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~   80 (329)
T cd07215           1 RILSIDGGGIRGIIPATILVSVEEKLQKKTGNPEARLADYFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLER   80 (329)
T ss_pred             CEEEEcCChHHHHHHHHHHHHHHHHHhhhcCCCCCcHhhccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHh
Confidence            69999999999999999999999999866777778999999999999999999999998877799999999999999999


Q ss_pred             chhcccCCcccccc----ccccCCCchHHHHHHHHHhcccCCCeeeeccCCCcceeeeeecCCCCcEEeecCCCCCCCCC
Q 016359          109 NSELFNAGFSAGFL----RRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSF  184 (390)
Q Consensus       109 ~~~iF~~~~~~~~~----~~~~~y~~~~L~~~L~~~~~~~~g~~~~l~d~~~~v~I~a~d~~~~~p~~f~~~~~~~~~~~  184 (390)
                      +.+||+...+..+.    ...++|++++|+++|+++|     ++.+|.|+.++++|++||+.+++|++|+++....++..
T Consensus        81 ~~~IF~~~~~~~~~~~~~~~~~~y~~~~L~~~L~~~f-----g~~~l~d~~~~~~i~a~d~~~~~~~~f~~~~~~~~~~~  155 (329)
T cd07215          81 GNYIFKKKIWNKIKSRGGFLNEKYSHKPLEEVLLEYF-----GDTKLSELLKPCLITSYDIERRSPHFFKSHTAIKNEQR  155 (329)
T ss_pred             hHhhcccchhhhhhhhccccccccCcHHHHHHHHHHh-----CCCchhhhcCCceEEeeecCCCCceEecCcccCCCccc
Confidence            99999874322110    1247999999999999999     67899999999999999999999999999876555667


Q ss_pred             CchHHHHHHHhcCCCCCCCceEEeecCCceeeeeecCcccCCChHHHHHHHHHhcCCCCCCCCCCcceEEEEecCCCCCC
Q 016359          185 NFELWKACRATSATPSMFKPFALTSVDGKTSCTAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGPLIS  264 (390)
Q Consensus       185 ~~~l~da~rASsAaP~yF~P~~i~~~~G~~~~~~iDGGv~~NnP~~~Al~ea~~~~~~~~~~~~~~~~~vlSiGTG~~~~  264 (390)
                      +.++|||||||||||+||||+.+.+.+|+ .+.|||||+.+|||+++|+.||.......+...+.++++|||||||... 
T Consensus       156 ~~~l~da~~ASsAaP~~F~p~~i~~~~g~-~~~~vDGGv~aNnP~~~a~~ea~~~~~~~~~~~~~~~i~vlSiGTG~~~-  233 (329)
T cd07215         156 DFYVRDVARATSAAPTYFEPARIHSLTGE-KYTLIDGGVFANNPTLCAYAEARKLKFEQPGKPTAKDMIILSLGTGKNK-  233 (329)
T ss_pred             CccHHHHhHHHhhcccccCceEeecCCCc-EEEEecCceecCCHHHHHHHHHHHhhccCcCCCCcCceEEEEecCCCCC-
Confidence            88999999999999999999999755565 5579999999999999999999762100022234578999999999987 


Q ss_pred             CCCCCCCCCCCCCCCC-chHHHHHHHhhhhHHHHHHHHhhhhc--CCCcEEEeecCCCCCCCCCCChhHHHhhhhhcccc
Q 016359          265 GSGPCERKPRSNGECS-TSSVVDIVLDGVSETIDQMLGNAFCW--NRADYVRIQVNGLISEGVVGPRMEAEVLKERGVES  341 (390)
Q Consensus       265 ~~~~~~~~~~~wg~~~-~~~l~~i~~~a~~~~~d~~~~~~~~~--~~~~Y~Ri~~~~l~~~~~~~~~~~d~~~~~~~~~~  341 (390)
                      ..+. +.+..+||.++ ..+|++++|+++++++|++++++|+.  .+++|+|||++. +..    ..+||+ .++++++.
T Consensus       234 ~~~~-~~~~~~wG~~~W~~~l~~~~~~~~~~~~d~~~~~l~~~~~~~~~Y~Ri~~~l-~~~----~~~lD~-a~~~~i~~  306 (329)
T cd07215         234 KSYT-YEKVKDWGLLGWAKPLIDIMMDGASQTVDYQLKQIFDAEGDQQQYLRIQPEL-EDA----DPEMDD-ASPENLEK  306 (329)
T ss_pred             CCCC-HHHhcccCcccchHHHHHHHHhhhHHHHHHHHHHHHhhcCCCCceEEEeCCC-CCC----cccccc-CCHHHHHH
Confidence            3343 34567899986 67999999999999999999999953  358999999984 331    235888 78899999


Q ss_pred             ccccccccccccHHHHHHHHHHHH
Q 016359          342 LPFGGKRLLTETNGQRIESFVQRL  365 (390)
Q Consensus       342 l~~~~~~~~~~~n~~~l~~~a~~L  365 (390)
                      |...|++++ ++|++.|++||+.|
T Consensus       307 L~~~~~~~~-~~~~~~i~~~~~~~  329 (329)
T cd07215         307 LREVGQALA-EDHKDQLDEIVDRL  329 (329)
T ss_pred             HHHHHHHHH-HHhHHHHHHHHHhC
Confidence            999999988 78999999999875

>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants	Back alignment and domain information

>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8	Back alignment and domain information

>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase	Back alignment and domain information

>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase	Back alignment and domain information

>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase	Back alignment and domain information

>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9	Back alignment and domain information

>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17	Back alignment and domain information

>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]	Back alignment and domain information

>COG3621 Patatin [General function prediction only]	Back alignment and domain information

>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1	Back alignment and domain information

>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2	Back alignment and domain information

>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]	Back alignment and domain information

>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6	Back alignment and domain information

>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes	Back alignment and domain information

>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7	Back alignment and domain information

>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6	Back alignment and domain information

>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli	Back alignment and domain information

>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli	Back alignment and domain information

>PRK10279 hypothetical protein; Provisional	Back alignment and domain information

>cd07198 Patatin Patatin-like phospholipase	Back alignment and domain information

>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2	Back alignment and domain information

>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4	Back alignment and domain information

>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family	Back alignment and domain information

>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	Back alignment and domain information

>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5	Back alignment and domain information

>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3	Back alignment and domain information

>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1	Back alignment and domain information

>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2	Back alignment and domain information

>cd07232 Pat_PLPL Patain-like phospholipase	Back alignment and domain information

>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2	Back alignment and domain information

>cd07224 Pat_like Patatin-like phospholipase	Back alignment and domain information

>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	Back alignment and domain information

>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase	Back alignment and domain information

>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5	Back alignment and domain information

>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]	Back alignment and domain information

>cd07229 Pat_TGL3_like Triacylglycerol lipase 3	Back alignment and domain information

>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase	Back alignment and domain information

>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases	Back alignment and domain information

>TIGR03607 patatin-related protein	Back alignment and domain information

>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	Back alignment and domain information

>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]	Back alignment and domain information

>KOG3773 consensus Adiponutrin and related vesicular transport proteins; predicted alpha/beta hydrolase [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd00147 cPLA2_like Cytosolic phospholipase A2, catalytic domain; hydrolyses arachidonyl phospholipids	Back alignment and domain information

>cd07202 cPLA2_Grp-IVC Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent	Back alignment and domain information

>cd07201 cPLA2_Grp-IVB-IVD-IVE-IVF Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent	Back alignment and domain information

>KOG1325 consensus Lysophospholipase [Lipid transport and metabolism]	Back alignment and domain information

>smart00022 PLAc Cytoplasmic phospholipase A2, catalytic subunit	Back alignment and domain information

>cd07203 cPLA2_Fungal_PLB Fungal Phospholipase B-like; cPLA2 GrpIVA homologs; catalytic domain	Back alignment and domain information

>PF01735 PLA2_B: Lysophospholipase catalytic domain; InterPro: IPR002642 This family consists of lysophospholipase / phospholipase B 3	Back alignment and domain information

>cd07200 cPLA2_Grp-IVA Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		390
1oxw_A		373	The Crystal Structure Of Semet Patatin Length = 373		3e-15

>pdb|1OXW|A Chain A, The Crystal Structure Of Semet Patatin Length = 373

Back alignment and structure

Iteration: 1

Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 82/342 (23%), Positives = 149/342 (43%), Gaps = 41/342 (11%) Query: 47 LIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLIT 106 L LE Q++ + A++AD+FD+I GT G LL + + + + RP A++ + Sbjct: 35 LEFLEGQLQEXDNNADARLADYFDVIGGTSTGGLLTAXISTPNENNRPFAAAKEIVPFYF 94 Query: 107 RRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLN 166 ++FN S L K + GK + +VL+E G+ + +++ FD+ Sbjct: 95 EHGPQIFNP--SGQILGPK--YDGKYLXQVLQEKL----GET-RVHQALTEVVISSFDIK 145 Query: 167 SSAPFVFSRADASESPSFNFELWKACRATSATPSMFKPFAL---TSVDGKTSCTAVDGGL 223 ++ P +F++++ + SP + + + +T+A P+ F P TS + VDG + Sbjct: 146 TNKPVIFTKSNLANSPELDAKXYDISYSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAV 205 Query: 224 -VMNNPTAAAVTHVLHNKRDFPSVNGVEDL-----LVLSLGNGPLISGSGPCERKPRSNG 277 + +P +++ + P+ + L L+LSLG +G+ K + Sbjct: 206 ATVADPALLSISVATRLAQKDPAFASIRSLNYKKXLLLSLG-----TGTTSEFDKTYTAK 260 Query: 278 ECSTSSVVDIVL-------DGVSETIDQMLGNAFCW--NRADYVRIQVNGLISEGVVGPR 328 E +T + V L S D L AF ++ +Y+R+Q N L G Sbjct: 261 EAATWTAVHWXLVIQKXTDAASSYXTDYYLSTAFQALDSKNNYLRVQENAL-----TGTT 315 Query: 329 MEAEVLKERGVESLPFGGKRLL----TETNGQRIESFVQRLA 366 E + E E L G+ LL +E N + E ++R A Sbjct: 316 TEXDDASEANXELLVQVGENLLKKPVSEDNPETYEEALKRFA 357

PyMOL of 1oxw

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		390
1oxw_A		373	Patatin; alpha/beta class fold with approximately	4e-66
3tu3_B		711	EXOU; type III secretion system, SPC infectious di	9e-04

>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3 Length = 373	Back alignment and structure

 Score =  213 bits (543), Expect = 4e-66
 Identities = 85/370 (22%), Positives = 155/370 (41%), Gaps = 33/370 (8%)

Query: 16  QKWLAHCEPT--KRTRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIA 73
                H      +   VLSIDGGG  GI+    L  LE Q++    +  A++AD+FD+I 
Sbjct: 2   HHHHHHAMAQLGEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIG 61

Query: 74  GTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSM 133
           GT  G LL +M+   + + RP   A++ +        ++FN            ++ GK +
Sbjct: 62  GTSTGGLLTAMISTPNENNRPFAAAKEIVPFYFEHGPQIFNPSGQ----ILGPKYDGKYL 117

Query: 134 DKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACR 193
            +VL+E           +      +++  FD+ ++ P +F++++ + SP  + +++    
Sbjct: 118 MQVLQEKL-----GETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDISY 172

Query: 194 ATSATPSMFKPFAL---TSVDGKTSCTAVDGGLV-MNNPTAAAVTHVLHNKRDFPSVNGV 249
           +T+A P+ F P      TS   +     VDG +  + +P   +++      +  P+   +
Sbjct: 173 STAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASI 232

Query: 250 -----EDLLVLSLGNGPLISGSGPCERKPRSNGECS--TSSVVDIVLDGVSETIDQMLGN 302
                + +L+LSLG G           K  +          +  +     S   D  L  
Sbjct: 233 RSLNYKKMLLLSLGTGTTSEFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLST 292

Query: 303 AFCWNRA--DYVRIQVNGLISEGVVGPRMEAEVLKERGVESLPFGGKRLL----TETNGQ 356
           AF    +  +Y+R+Q N L      G   E +   E  +E L   G+ LL    +E N +
Sbjct: 293 AFQALDSKNNYLRVQENALT-----GTTTEMDDASEANMELLVQVGENLLKKPVSEDNPE 347

Query: 357 RIESFVQRLA 366
             E  ++R A
Sbjct: 348 TYEEALKRFA 357

PyMOL of 1oxw

>3tu3_B EXOU; type III secretion system, SPC infectious diseases, structural genomics, center for struct genomics of infectious diseases, csgid; 1.92A {Pseudomonas aeruginosa} PDB: 4akx_B* Length = 711	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		390
1oxw_A		373	Patatin; alpha/beta class fold with approximately	100.0
4akf_A		577	VIPD; transferase; 2.90A {Legionella pneumophila}	99.94
3tu3_B		711	EXOU; type III secretion system, SPC infectious di	99.92
1cjy_A		749	CPLA2, protein (cytosolic phospholipase A2); lipid	95.83

>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3	Back alignment and structure

Probab=100.00  E-value=4.9e-63  Score=488.18  Aligned_cols=337  Identities=24%  Similarity=0.419  Sum_probs=274.5

Q ss_pred             CCCCCCcEEEEEcCCchhHHHHHHHHHHHHHHhhhhcCCCCCCcCccccEEEeccHHHHHHHHHhCCCCCCCCccCHHHH
Q 016359           22 CEPTKRTRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDA  101 (390)
Q Consensus        22 ~~~~~~~~iLsldGGG~RG~~~~~iL~~Le~~l~~~~g~~~~~i~~~fD~i~GTStG~iia~~l~~~~~~g~~~~s~~e~  101 (390)
                      .+++.+.++|||||||+||+++++||++||+++++..|.++.+++++||+|+|||+|||+|++|+.+...++|+++++++
T Consensus        10 ~~~~~~~~~LsLdGGG~RG~~~~gvL~~Lee~l~~~~G~~~~~i~~~fD~I~GTS~Gaiiaa~la~g~~~~r~~~s~~el   89 (373)
T 1oxw_A           10 AQLGEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEI   89 (373)
T ss_dssp             --CCSCEEEEEECCCGGGGHHHHHHHHHHHHHHHHHTTCTTCCHHHHCSEEEECTHHHHHHHHHHSBCTTSSBSSCGGGH
T ss_pred             cCCCCCeEEEEEcCCcHHHHHHHHHHHHHHHHHHhhcCCccCCchhhCCEEEEECHHHHHHHHHhcCCccCCCcCCHHHH
Confidence            35677899999999999999999999999999876556446789999999999999999999999998778999999999


Q ss_pred             HHHHHHhchhcccCCccccccccccCCCchHHHHHHHHHhcccCCCeeeeccCCCcceeeeeecCCCCcEEeecCCCCCC
Q 016359          102 LDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASES  181 (390)
Q Consensus       102 ~~~y~~~~~~iF~~~~~~~~~~~~~~y~~~~L~~~L~~~~~~~~g~~~~l~d~~~~v~I~a~d~~~~~p~~f~~~~~~~~  181 (390)
                      .++|.+.+.++|...   ..+ ..++|+.+.|+++|++.|     ++.+|.|+.++++|+++|+.+++|++|++|+.+.+
T Consensus        90 ~~~~~~~~~~iF~~~---~~l-~~~~~~~~~L~~~l~~~~-----~~~~l~d~~~~~~i~atd~~~~~~~~f~~~~~~~~  160 (373)
T 1oxw_A           90 VPFYFEHGPQIFNPS---GQI-LGPKYDGKYLMQVLQEKL-----GETRVHQALTEVVISSFDIKTNKPVIFTKSNLANS  160 (373)
T ss_dssp             HHHHHHHHHHHTCCC---CCS-SSCSCCCHHHHHHHHHHH-----TTCBGGGCSSEEEEEEEETTTTEEEEEESSSTTTC
T ss_pred             HHHHHHhhHhhcCCC---Ccc-ccCCcCcHHHHHHHHHHH-----CcCcHHHcCCCEEEEeEECCCCCeEEEeCCCCCCC
Confidence            999999999999873   122 347899999999999999     66789999999999999999999999999987666


Q ss_pred             CCCCchHHHHHHHhcCCCCCCCceEEeecC--Cce-eeeeecCcccC-CChHHHHHHHHHhcCCCCCCC------C--CC
Q 016359          182 PSFNFELWKACRATSATPSMFKPFALTSVD--GKT-SCTAVDGGLVM-NNPTAAAVTHVLHNKRDFPSV------N--GV  249 (390)
Q Consensus       182 ~~~~~~l~da~rASsAaP~yF~P~~i~~~~--G~~-~~~~iDGGv~~-NnP~~~Al~ea~~~~~~~~~~------~--~~  249 (390)
                      +..+..+|+||+||||+|+||+|+++.+.+  |++ .+.|+|||+.+ |||+..|+.|+..   .|+..      +  +.
T Consensus       161 ~~~~~~l~~av~ASsA~P~~F~p~~i~~~d~~G~~~~~~~vDGGv~~~NnP~~~a~~ea~~---~~~~~~~~~~~~~~~~  237 (373)
T 1oxw_A          161 PELDAKMYDISYSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATR---LAQKDPAFASIRSLNY  237 (373)
T ss_dssp             GGGCCBHHHHHHHHHCCTTTSCCEEEEEECTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHH---HTTTCGGGTTSTTCCG
T ss_pred             CccCchHHHHHHHHccCCcCcCcEEeeccCCCCcccceeeecCcccccCChHHHHHHHHHH---HhccCccccccccccc
Confidence            667889999999999999999999997554  642 34899999999 9999999999854   23321      1  23


Q ss_pred             cceEEEEecCCCCCC--CCCCCCCCCCCCCCCC-chHHHHHHHhhhhHHHHHHHHhhhhcC--CCcEEEeecCCCCCCCC
Q 016359          250 EDLLVLSLGNGPLIS--GSGPCERKPRSNGECS-TSSVVDIVLDGVSETIDQMLGNAFCWN--RADYVRIQVNGLISEGV  324 (390)
Q Consensus       250 ~~~~vlSiGTG~~~~--~~~~~~~~~~~wg~~~-~~~l~~i~~~a~~~~~d~~~~~~~~~~--~~~Y~Ri~~~~l~~~~~  324 (390)
                      ++++|||||||..+.  ..|. ..+..+||.++ ..+|++++++++++++|++++++|+..  +++|||||++.++..  
T Consensus       238 ~~~~vvSlGTG~~~~~~~~~~-~~~~~~wG~~~w~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~Y~Ri~~~~l~~~--  314 (373)
T 1oxw_A          238 KKMLLLSLGTGTTSEFDKTYT-AKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGT--  314 (373)
T ss_dssp             GGEEEEEECCCCBCTTSSCCC-HHHHTTCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCBCGG--
T ss_pred             CceEEEEecCCCCCCcccccC-hhhhhhhhhHhHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCcEEEEeCCCCCCc--
Confidence            679999999998542  2343 34557899876 458999999999999999999999653  489999998655542  


Q ss_pred             CCChhHHHhhhhhccccccccccccc--------cccHHHHHHHHHHHHHHcccCCCCCC
Q 016359          325 VGPRMEAEVLKERGVESLPFGGKRLL--------TETNGQRIESFVQRLAASGKTSLPPS  376 (390)
Q Consensus       325 ~~~~~~d~~~~~~~~~~l~~~~~~~~--------~~~n~~~l~~~a~~L~~~r~~r~~~~  376 (390)
                        ...+|+ .++++++.|...++.++        .+||+++|++||+.|++||++|..+.
T Consensus       315 --~~~lD~-~~~~~l~~L~~~~~~~l~~~~~~~~~~tn~~~l~~~a~~L~~e~~~r~~~~  371 (373)
T 1oxw_A          315 --TTEMDD-ASEANMELLVQVGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRANKA  371 (373)
T ss_dssp             --GGCTTC-CCHHHHHHHHHHHHHHHTSBSSSSCCCBHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             --cccccc-CCHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHhhcccccC
Confidence              123454 44455555555555544        24599999999999999999887554

PyMOL of 1oxw

>4akf_A VIPD; transferase; 2.90A {Legionella pneumophila}	Back alignment and structure

>3tu3_B EXOU; type III secretion system, SPC infectious diseases, structural genomics, center for struct genomics of infectious diseases, csgid; 1.92A {Pseudomonas aeruginosa} PDB: 4akx_B*	Back alignment and structure

>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		390
d1oxwa_		360	c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solan	5e-48

>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} Length = 360	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]

 Score =  164 bits (416), Expect = 5e-48
 Identities = 78/357 (21%), Positives = 151/357 (42%), Gaps = 25/357 (7%)

Query: 26  KRTRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASML 85
           +   VLSIDGGG  GI+    L  LE Q++    +  A++AD+FD+I GT  G LL +M+
Sbjct: 3   EMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMI 62

Query: 86  VADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDD 145
              + + RP   A++ +        ++FN            ++ GK + +VL+E      
Sbjct: 63  STPNENNRPFAAAKEIVPFYFEHGPQIFN----PSGQILGPKYDGKYLMQVLQEKL---- 114

Query: 146 GKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKPF 205
                +      +++  FD+ ++ P +F++++ + SP  + +++    +T+A P+ F P 
Sbjct: 115 -GETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDISYSTAAAPTYFPPH 173

Query: 206 AL---TSVDGKTSCTAVDGGLV-MNNPTAAAVTHVLHNKRDFPSVNGVEDLLVLSLGNGP 261
                TS   +     VDG +  + +P   +++      +  P+   +  L    +    
Sbjct: 174 YFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLNYKKMLLLS 233

Query: 262 LISGSGPCERKPRSNGECSTSSV-------VDIVLDGVSETIDQMLGNAF--CWNRADYV 312
           L +G+     K  +  E +T +          +     S   D  L  AF    ++ +Y+
Sbjct: 234 LGTGTTSEFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNNYL 293

Query: 313 RIQVNGLISE--GVVGPRMEA-EVLKERGVESLPFGGKRLLTETNGQRIESFVQRLA 366
           R+Q N L      +        E+L + G   L         ET  + ++ F + L+
Sbjct: 294 RVQENALTGTTTEMDDASEANMELLVQVGENLLKKPVSEDNPETYEEALKRFAKLLS 350

PyMOL of d1oxwa_

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		390
d1oxwa_		360	Patatin {Heartleaf nightshade (Solanum cardiophyll	100.0
d1cjya2		580	Cytosolic phospholipase A2 catalytic domain {Human	94.46

>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]

Probab=100.00  E-value=9.9e-54  Score=417.48  Aligned_cols=333  Identities=23%  Similarity=0.388  Sum_probs=265.6

Q ss_pred             CCCcEEEEEcCCchhHHHHHHHHHHHHHHhhhhcCCCCCCcCccccEEEeccHHHHHHHHHhCCCCCCCCccCHHHHHHH
Q 016359           25 TKRTRVLSIDGGGTTGIVAGAALIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDL  104 (390)
Q Consensus        25 ~~~~~iLsldGGG~RG~~~~~iL~~Le~~l~~~~g~~~~~i~~~fD~i~GTStG~iia~~l~~~~~~g~~~~s~~e~~~~  104 (390)
                      ++.++||||||||+||++++++|++||+++.+..+.++.+++|+||+|+|||+|||+|++|+.+...+.+.++.+++.+.
T Consensus         2 ~~~v~iLsldGGG~rG~~~~~vL~~L~~~~~~~~~~~~~~~~d~fD~i~GTS~Gaiia~~la~g~~~~~~~~~~~~~~~~   81 (360)
T d1oxwa_           2 GEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVPF   81 (360)
T ss_dssp             CSCEEEEEECCCGGGGHHHHHHHHHHHHHHHHHTTCTTCCHHHHCSEEEECTHHHHHHHHHHSBCTTSSBSSCGGGHHHH
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHHHHHcCCcccccCCCChhhhCCEEEEecHHHHHHHHHHcCCCchhHHHHHHHHHHH
Confidence            46899999999999999999999999999887777778899999999999999999999999998878888999999999


Q ss_pred             HHHhchhcccCCccccccccccCCCchHHHHHHHHHhcccCCCeeeeccCCCcceeeeeecCCCCcEEeecCCCCCCCCC
Q 016359          105 ITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSF  184 (390)
Q Consensus       105 y~~~~~~iF~~~~~~~~~~~~~~y~~~~L~~~L~~~~~~~~g~~~~l~d~~~~v~I~a~d~~~~~p~~f~~~~~~~~~~~  184 (390)
                      |......+|...    .+...++|+.+.|+++|++.|     ++.++.+..+++.+++++..++++++|++++...++..
T Consensus        82 ~~~~~~~~f~~~----~~~~~~~~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~  152 (360)
T d1oxwa_          82 YFEHGPQIFNPS----GQILGPKYDGKYLMQVLQEKL-----GETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPEL  152 (360)
T ss_dssp             HHHHHHHHTCCC----CCSSSCSCCCHHHHHHHHHHH-----TTCBGGGCSSEEEEEEEETTTTEEEEEESSSTTTCGGG
T ss_pred             HHhhcchhhhcc----ccccCcccchHHHHHHHHHHh-----CCchhhhccCcceeEecccCCCCeEEEeccccccCCcc
Confidence            998888888762    223357999999999999999     67889999999999999999999999999987777777


Q ss_pred             CchHHHHHHHhcCCCCCCCceEEeec---CCceeeeeecCcccCC-ChHHHHHHHHHhcCCCCCCC--------CCCcce
Q 016359          185 NFELWKACRATSATPSMFKPFALTSV---DGKTSCTAVDGGLVMN-NPTAAAVTHVLHNKRDFPSV--------NGVEDL  252 (390)
Q Consensus       185 ~~~l~da~rASsAaP~yF~P~~i~~~---~G~~~~~~iDGGv~~N-nP~~~Al~ea~~~~~~~~~~--------~~~~~~  252 (390)
                      +.++|+|++||||+|+||||+++...   +|...+.|+|||+.+| ||+.+|+.|+..   .|+..        .+.+.+
T Consensus       153 ~~~l~~a~~ASsA~P~~F~p~~~~~~~~~~~~~~~~~~Dgg~~~~nnp~~~a~~e~~~---l~~~~~~~~~~~~~~~~~~  229 (360)
T d1oxwa_         153 DAKMYDISYSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATR---LAQKDPAFASIRSLNYKKM  229 (360)
T ss_dssp             CCBHHHHHHHHHCCTTTSCCEEEEEECTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHH---HTTTCGGGTTSTTCCGGGE
T ss_pred             cchHHHhhhhhhcCCCCCCCEEEecccCCCCceeEEecccchhhccCchHHHHHHHHH---hcccCccccccccCCccce
Confidence            89999999999999999999998643   2334567999999865 899999999865   23321        224678


Q ss_pred             EEEEecCCCCCCCCC-CCCCCCCCCCCCC-chHHHHHHHhhhhHHHHHHHHhhhhcC--CCcEEEeecCCCCCCCCCCCh
Q 016359          253 LVLSLGNGPLISGSG-PCERKPRSNGECS-TSSVVDIVLDGVSETIDQMLGNAFCWN--RADYVRIQVNGLISEGVVGPR  328 (390)
Q Consensus       253 ~vlSiGTG~~~~~~~-~~~~~~~~wg~~~-~~~l~~i~~~a~~~~~d~~~~~~~~~~--~~~Y~Ri~~~~l~~~~~~~~~  328 (390)
                      +++|+|||..+.... .......+||.+. ..++.+++.+++++++++++.++++..  +++|||||++.+..+.    .
T Consensus       230 ~~~s~gtg~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~R~~~~~~~~~~----~  305 (360)
T d1oxwa_         230 LLLSLGTGTTSEFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGTT----T  305 (360)
T ss_dssp             EEEEECCCCBCTTSSCCCHHHHTTCCHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCBCGGG----G
T ss_pred             eeeccccccccccccccchhhhhhcchHhHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCcEEEEcCCcccccc----c
Confidence            999999998763211 1123456788765 567888888888899999998888654  4889999986543311    1


Q ss_pred             hHHHhhhhhccccccccccccc--------cccHHHHHHHHHHHHHHcccCCCC
Q 016359          329 MEAEVLKERGVESLPFGGKRLL--------TETNGQRIESFVQRLAASGKTSLP  374 (390)
Q Consensus       329 ~~d~~~~~~~~~~l~~~~~~~~--------~~~n~~~l~~~a~~L~~~r~~r~~  374 (390)
                      .+|| .++++++.|...|++++        .++|+++|++||+.|++||++|..
T Consensus       306 ~lDd-~s~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~L~~~~~~L~~er~~r~~  358 (360)
T d1oxwa_         306 EMDD-ASEANMELLVQVGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRAN  358 (360)
T ss_dssp             CTTC-CCHHHHHHHHHHHHHHHTSBSSSSCCCBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccC-CCHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence            2333 33334443333333322        357999999999999999999853

PyMOL of d1oxwa_

>d1cjya2 c.19.1.2 (A:142-721) Cytosolic phospholipase A2 catalytic domain {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure