Citrus Sinensis ID: 016363
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 390 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SK87 | 386 | Alcohol dehydrogenase-lik | yes | no | 0.979 | 0.989 | 0.658 | 1e-145 | |
| Q9SK86 | 388 | Alcohol dehydrogenase-lik | no | no | 0.992 | 0.997 | 0.637 | 1e-142 | |
| Q0V7W6 | 389 | Alcohol dehydrogenase-lik | no | no | 0.966 | 0.969 | 0.638 | 1e-140 | |
| Q9FH04 | 390 | Alcohol dehydrogenase-lik | no | no | 0.982 | 0.982 | 0.591 | 1e-130 | |
| P25141 | 382 | Alcohol dehydrogenase 1 O | N/A | no | 0.971 | 0.992 | 0.522 | 1e-107 | |
| Q8LEB2 | 381 | Alcohol dehydrogenase-lik | no | no | 0.976 | 1.0 | 0.502 | 1e-103 | |
| P14674 | 380 | Alcohol dehydrogenase 2 O | N/A | no | 0.966 | 0.992 | 0.513 | 1e-102 | |
| P14673 | 380 | Alcohol dehydrogenase 1 O | N/A | no | 0.966 | 0.992 | 0.513 | 1e-102 | |
| P14675 | 380 | Alcohol dehydrogenase 3 O | N/A | no | 0.966 | 0.992 | 0.513 | 1e-102 | |
| P48977 | 380 | Alcohol dehydrogenase OS= | N/A | no | 0.969 | 0.994 | 0.509 | 1e-102 |
| >sp|Q9SK87|ADHL2_ARATH Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 516 bits (1328), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/384 (65%), Positives = 306/384 (79%), Gaps = 2/384 (0%)
Query: 6 ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
AS GK IRCKAAI R G+PLVIEEI+V+PP+A+E+RIKILCTSLCH+DVTFWK +
Sbjct: 4 ASITEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSG 63
Query: 66 LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
P P I GHEAVGVVES+GE V+ K+ D+VLP+FH C EC++C S KSN C+K+
Sbjct: 64 -PLARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYT 122
Query: 126 RGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
Y N R G TSRF++ +G+ IHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLS
Sbjct: 123 NDYLSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLS 182
Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
C V+TG+GAAWKVA VE GSTV IFGLGAVGLAVAEG RL A+KIIGVD+NP KFEIGK
Sbjct: 183 CSVATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGK 242
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
+FGITDF+NPA CG+KT+S+VI+EMTD GADY FECIGL S+M +AF S+R G GKT++L
Sbjct: 243 RFGITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVL 302
Query: 305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 364
G+E PISL S ++L+GR+VCGT FGGLKP+ DI L +YL KELNL + ITHE+SF
Sbjct: 303 GMEQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSF 362
Query: 365 HDINKAFDLLLEGKSLRCIIWMDK 388
+INKAF LL EG S+RCIIWMDK
Sbjct: 363 EEINKAFHLLAEGNSIRCIIWMDK 386
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1 |
| >sp|Q9SK86|ADHL1_ARATH Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/389 (63%), Positives = 304/389 (78%), Gaps = 2/389 (0%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
M+ S GK I CKAAICR G+ LVIE+I V+PP+A+E+RIKILCTSLCH+D+TFW
Sbjct: 1 MDKTFFSSNEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFW 60
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
K S P P I GHEAVGVVES+GE V+ K+ D+VLP+FH C EC+DCKSSK+N
Sbjct: 61 KLSFG-PISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNW 119
Query: 121 CSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
C ++ + N R G SRF++ G+VIHHFL +SSF+EY+VVDI H+VKI+P IP+
Sbjct: 120 CDRYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDK 179
Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
A LLSCGVSTG+GAAWKVA VE GST+AIFGLGAVGLAVAEGARL A+KIIG+D N +K
Sbjct: 180 AALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDK 239
Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
FE+GKKFG TDFINP CG+K +S+VIKEMT+GG DY FEC+GL S++N+AF S+R G G
Sbjct: 240 FELGKKFGFTDFINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTG 299
Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359
KTV+LG+E H +PISL S ++L+GR +CG+ FGGLK + DI L YL KELNL FIT
Sbjct: 300 KTVMLGMEKHAAPISLGSFDLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFIT 359
Query: 360 HEVSFHDINKAFDLLLEGKSLRCIIWMDK 388
HE++F +INKAF LL EGKSLRCI+WMDK
Sbjct: 360 HELNFKEINKAFALLEEGKSLRCILWMDK 388
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q0V7W6|ADHL5_ARATH Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 499 bits (1285), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/379 (63%), Positives = 301/379 (79%), Gaps = 2/379 (0%)
Query: 11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
GK IRCKAA+ R PG+ LVIEEI V+PP+A+E+RIKI+CTSLCH+DV+F K + P
Sbjct: 12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSG-PLAR 70
Query: 71 LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
P I GHEAVGV+ES+GE+V ++ D+VLP+FH C ECRDCKSSKSN C++F +
Sbjct: 71 FPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLS 130
Query: 131 NMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
N R G TSRF++ G+ I+HFL +SSF+EY+VVDI H+VKI+P IP+ A LLSCGVST
Sbjct: 131 NTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVST 190
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
G+GAAWKVA VE GSTVA+FGLGAVGLAV EGARL A KIIGVD+NPEKFE+GKKFG T
Sbjct: 191 GIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFT 250
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
DFIN CG+ +S+VIKEMT GG DY FEC+GL S++ +AF+S+R G GKTV+LG++ H
Sbjct: 251 DFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKH 310
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
+P+SL S ++L+GR VCG+ FGGLKP+ DI L YL KELNL FITHE+ F +INK
Sbjct: 311 LTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINK 370
Query: 370 AFDLLLEGKSLRCIIWMDK 388
AFDLL++GKSLRCI+WM+K
Sbjct: 371 AFDLLVQGKSLRCILWMNK 389
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 229/387 (59%), Positives = 292/387 (75%), Gaps = 4/387 (1%)
Query: 2 NNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK 61
N+ S + + K IRCKAA+ R G+PLV+EEI V PP+ +E+RI+I+CT+LCHSDVTFWK
Sbjct: 5 NSSSDNKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWK 64
Query: 62 SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC 121
+P P I GHEA+GVVESVGE V+EV E D VLP F DCG+C DCKS KSN C
Sbjct: 65 --LQVPPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLC 122
Query: 122 SKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
SKF P MPR D +SRF +L G+ + HFLN+SSF+EY+V+D+ +VVKI IP A
Sbjct: 123 SKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRA 182
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
CLLSCGVSTGVGAAW+ A VE GSTV IFGLG++GLAVAEGARL AS+IIGVDINP KF
Sbjct: 183 CLLSCGVSTGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKF 242
Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
++G+KFG+T+F+N TC VS+VI EMTDGGADYCFEC+G +S++ +A+ R+GWGK
Sbjct: 243 QVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGK 302
Query: 301 TVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359
T+ LGV+ GS I L+S ++L G+ + G+ FGGLK ++ I L ++YL EL L +F+T
Sbjct: 303 TITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVT 362
Query: 360 HEVSFHDINKAFDLLLEGKSLRCIIWM 386
HE+ F +IN AF LLLEGK +RC++WM
Sbjct: 363 HEMKFEEINDAFQLLLEGKCIRCVLWM 389
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/383 (52%), Positives = 257/383 (67%), Gaps = 4/383 (1%)
Query: 6 ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
+S AG+VIRCKAA+ GKPLVIEE+EV PP+ E+R+KIL TSLCH+DV FW++
Sbjct: 2 SSNTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQ 61
Query: 66 LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
P P IFGHEA G+VESVGE V ++K D VLP+F +C +CR CKS +SN C
Sbjct: 62 TPLFPR--IFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLR 119
Query: 126 -RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
R M DG +RF + G I+HF+ S+F+EY+V V KI P PL C+LS
Sbjct: 120 INTDRGVMIHDGQTRFSK-DGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLS 178
Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
CG+STG+GA VA GSTVAIFGLGAVGLA AEGAR+ AS+IIGVD+NP +F K
Sbjct: 179 CGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAK 238
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
KFG+T+F+NP GDK V QVI EMTDGG D EC G + M AF +GWG V++
Sbjct: 239 KFGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLV 298
Query: 305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 364
GV + + +L R++ GT+FG KP+SDI ++ KY+ KEL L +FITH+V F
Sbjct: 299 GVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPF 358
Query: 365 HDINKAFDLLLEGKSLRCIIWMD 387
+INKAFD +L+G+S+RC+I M+
Sbjct: 359 SEINKAFDYMLKGESIRCMITME 381
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This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration. Petunia hybrida (taxid: 4102) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q8LEB2|ADHL6_ARATH Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/388 (50%), Positives = 260/388 (67%), Gaps = 7/388 (1%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
M+ S+S + +VI C AA+ G+PLV+EE+EV PP+ EIRIK++CTSLC SD++ W
Sbjct: 1 MSASSSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAW 60
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
+S + LP+ IFGHEA G+VES+GE V E ++ D VL +F +CG CR C S KSN
Sbjct: 61 ESQSLLPR-----IFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNM 115
Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
C G + M D +RF +KG ++H+ +SSF+EY+VV VK+ P PL
Sbjct: 116 CQVLGMERKGLMHSDQKTRF-SIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKI 174
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
CLLSCGV+ G+GAAW VA V+ GS+V IFGLG VGL+VA+GA+L A++I+GVDINP K
Sbjct: 175 CLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKA 234
Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
E K FG+TDFIN + + QVIK MT GGAD+ FEC+G T + A S +GWG
Sbjct: 235 EQAKTFGVTDFINSNDLSEP-IPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGM 293
Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITH 360
TV LGV +S + L G+S+ GT FGG KP+SD+ +L KY++KE+ + EFITH
Sbjct: 294 TVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITH 353
Query: 361 EVSFHDINKAFDLLLEGKSLRCIIWMDK 388
+SF +INKAF L+ EGK LRC++ M K
Sbjct: 354 NLSFDEINKAFVLMREGKCLRCVLHMPK 381
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 253/382 (66%), Gaps = 5/382 (1%)
Query: 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL 66
S G+VIRCKAA+ GKPLV+EE++V PP+ E+R+KIL TSLCH+DV FW++
Sbjct: 2 STTTGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQN 61
Query: 67 PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG- 125
P P I GHEA G+VESVGE V E+ D VLP+F +C +C CKS +SN CS
Sbjct: 62 PVFPR--ILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRI 119
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
R M DG SRF + G I+HF+ S+F+EY+VV + V KI P PL C+LSC
Sbjct: 120 NTDRGVMINDGQSRF-SINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSC 178
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
G+STG+GA VA GS+VAIFGLGAVGLA AEGAR+ AS+IIGVD+N +FE KK
Sbjct: 179 GISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKK 238
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
FG+T+F+NP K V +VI EMTDGG D EC G M AF +GWG V++G
Sbjct: 239 FGVTEFVNPKDY-SKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH 365
V + + + L R++ GT+FG KPRSDI ++ +KY++KEL L +FITH + F
Sbjct: 298 VPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFA 357
Query: 366 DINKAFDLLLEGKSLRCIIWMD 387
+INKAFDL+L+G+ LRCII M+
Sbjct: 358 EINKAFDLMLKGEGLRCIITME 379
|
Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 254/382 (66%), Gaps = 5/382 (1%)
Query: 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL 66
S G+VIRCKAA+ GKPLV+EE++V PP+ E+R+KIL TSLCH+DV FW++
Sbjct: 2 STTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQN 61
Query: 67 PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG- 125
P P I GHEA G+VESVGE V E+ D VLP+F +C +C CKS +SN CS
Sbjct: 62 PVFPR--ILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRI 119
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
R M DG SRF + G I+HF+ S+F+EY+VV + V KI P PL C+LSC
Sbjct: 120 NTDRGVMINDGQSRF-SINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSC 178
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
G+STG+GA VA GS+VAIFGLGAVGLA AEGAR+ AS+IIGVD+N +FE KK
Sbjct: 179 GISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKK 238
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
FG+T+F+NP K V +VI EMTDGG D EC G M AF +GWG V++G
Sbjct: 239 FGVTEFVNPKDY-SKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH 365
V + + + +L R++ GT+FG KPRSDI ++ +KY++KEL L +FITH + F
Sbjct: 298 VPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFA 357
Query: 366 DINKAFDLLLEGKSLRCIIWMD 387
+INKAFDL+L+G+ LRCII M+
Sbjct: 358 EINKAFDLMLKGEGLRCIITME 379
|
Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/382 (51%), Positives = 253/382 (66%), Gaps = 5/382 (1%)
Query: 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL 66
S G+VIRCKAA+ GKPLV+EE++V PP+ E+R+KIL TSLCH+DV FW++
Sbjct: 2 STTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQN 61
Query: 67 PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG- 125
P P I GHEA G+VESVGE V E+ D VLP+F +C +C CKS +SN CS
Sbjct: 62 PVFPR--ILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRI 119
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
R M DG SRF + G I+HF+ S+F+EY+VV + V KI P PL C+LSC
Sbjct: 120 NTDRGVMINDGQSRF-SINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSC 178
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
G+STG+GA VA GS+VAIFGLGAVGLA AEGAR+ AS+IIGVD+N +FE KK
Sbjct: 179 GISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKK 238
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
FG+T+F+NP K V +VI EMTDGG D EC G M AF +GWG V++G
Sbjct: 239 FGVTEFVNPKDY-SKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH 365
V + + + L R++ GT+FG KPRSDI ++ +KY++KEL L +FITH + F
Sbjct: 298 VPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFA 357
Query: 366 DINKAFDLLLEGKSLRCIIWMD 387
+INKAFDL+L+G+ LRCII M+
Sbjct: 358 EINKAFDLMLKGEGLRCIITME 379
|
Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P48977|ADH_MALDO Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/383 (50%), Positives = 261/383 (68%), Gaps = 5/383 (1%)
Query: 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL 66
S AG+VIRC+AA+ GKPLVIEE+EV PP+A E+RIKIL TSLCH+DV FW++
Sbjct: 2 SNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQN 61
Query: 67 PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG- 125
P P I+GHEA G+VESVGE V ++K D VLP+F +C +C CKS +SN C
Sbjct: 62 PLFPR--IYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRI 119
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
R M DG SRF +KG I+HF+ S+F+EY+VV + + KI P PL CLLSC
Sbjct: 120 NTDRGVMLSDGKSRF-SIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSC 178
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
G+STG+GA VA + GSTVA+FGLGAVGLA AEGARL+ AS+IIGVD++ ++FE KK
Sbjct: 179 GISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKK 238
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
FG+T+F+NP +K V +VI E+T+ G D EC G T M AF +GWG V++G
Sbjct: 239 FGVTEFVNPKA-HEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVG 297
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH 365
V + + + L R++ GT+FG K R+DI ++ +KY++KEL L +FITH+V F
Sbjct: 298 VPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFS 357
Query: 366 DINKAFDLLLEGKSLRCIIWMDK 388
+INKAF+ +L+G+ LRCII M++
Sbjct: 358 EINKAFEYMLKGEGLRCIIRMEE 380
|
Malus domestica (taxid: 3750) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 390 | ||||||
| 359492460 | 408 | PREDICTED: alcohol dehydrogenase-like 1 | 0.992 | 0.948 | 0.731 | 1e-165 | |
| 302141994 | 387 | unnamed protein product [Vitis vinifera] | 0.992 | 1.0 | 0.731 | 1e-165 | |
| 357465103 | 391 | Alcohol dehydrogenase-like protein [Medi | 0.966 | 0.964 | 0.714 | 1e-150 | |
| 115451243 | 381 | Os03g0189400 [Oryza sativa Japonica Grou | 0.956 | 0.979 | 0.677 | 1e-144 | |
| 297845266 | 388 | hypothetical protein ARALYDRAFT_472484 [ | 0.992 | 0.997 | 0.642 | 1e-144 | |
| 15219884 | 386 | alcohol dehydrogenase-like 2 [Arabidopsi | 0.979 | 0.989 | 0.658 | 1e-144 | |
| 212720660 | 382 | putative alcohol dehydrogenase superfami | 0.976 | 0.997 | 0.650 | 1e-143 | |
| 195626420 | 382 | alcohol dehydrogenase 1 [Zea mays] | 0.976 | 0.997 | 0.647 | 1e-143 | |
| 297845264 | 388 | hypothetical protein ARALYDRAFT_472482 [ | 0.992 | 0.997 | 0.642 | 1e-142 | |
| 356554319 | 387 | PREDICTED: alcohol dehydrogenase-like 7- | 0.989 | 0.997 | 0.645 | 1e-142 |
| >gi|359492460|ref|XP_002285748.2| PREDICTED: alcohol dehydrogenase-like 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/388 (73%), Positives = 326/388 (84%), Gaps = 1/388 (0%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
M K++S AGK I CKAAIC+ PG+ LVIEEIEV PP+AWEIRIKILCTSLCH+DVTFW
Sbjct: 22 MEKKNSSETAGKAITCKAAICKEPGEALVIEEIEVAPPEAWEIRIKILCTSLCHTDVTFW 81
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
K + D P+ P I GHEAVGVVESVGE+VEEVKE DLV+P+F C ECRDC S+KSN
Sbjct: 82 KMN-DGPERSFPKILGHEAVGVVESVGEHVEEVKEGDLVVPVFLPSCKECRDCTSTKSNL 140
Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
C+KFG + MPRDG+SRFR +KG+V+HHFL +SSF EY+VVDI HVV++ IP A
Sbjct: 141 CTKFGSKFYQGMPRDGSSRFRNMKGEVVHHFLFVSSFVEYTVVDIAHVVRLNHEIPADKA 200
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
CLLSCGVSTG+GAAWKVA VE GSTVAIFGLGAVGLAVAEGARL ASKIIGVD+NPEKF
Sbjct: 201 CLLSCGVSTGIGAAWKVAEVEEGSTVAIFGLGAVGLAVAEGARLRGASKIIGVDLNPEKF 260
Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
EIGKKFG+T FINP CG+K VSQV+KEMTDGGADYCFECIGL S+M DAF+ SREGWGK
Sbjct: 261 EIGKKFGVTHFINPTACGEKAVSQVVKEMTDGGADYCFECIGLASLMKDAFDCSREGWGK 320
Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITH 360
TVILGVEMHGS +++NS +IL+GRSV G+ FGGLKP+SDI LA+KY+DKEL L EFITH
Sbjct: 321 TVILGVEMHGSDLNVNSSQILRGRSVMGSLFGGLKPKSDIPILAKKYIDKELRLDEFITH 380
Query: 361 EVSFHDINKAFDLLLEGKSLRCIIWMDK 388
EV+F DINKAF+ +GKS+RCIIWMDK
Sbjct: 381 EVNFQDINKAFEFQSQGKSIRCIIWMDK 408
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302141994|emb|CBI19197.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/388 (73%), Positives = 326/388 (84%), Gaps = 1/388 (0%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
M K++S AGK I CKAAIC+ PG+ LVIEEIEV PP+AWEIRIKILCTSLCH+DVTFW
Sbjct: 1 MEKKNSSETAGKAITCKAAICKEPGEALVIEEIEVAPPEAWEIRIKILCTSLCHTDVTFW 60
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
K + D P+ P I GHEAVGVVESVGE+VEEVKE DLV+P+F C ECRDC S+KSN
Sbjct: 61 KMN-DGPERSFPKILGHEAVGVVESVGEHVEEVKEGDLVVPVFLPSCKECRDCTSTKSNL 119
Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
C+KFG + MPRDG+SRFR +KG+V+HHFL +SSF EY+VVDI HVV++ IP A
Sbjct: 120 CTKFGSKFYQGMPRDGSSRFRNMKGEVVHHFLFVSSFVEYTVVDIAHVVRLNHEIPADKA 179
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
CLLSCGVSTG+GAAWKVA VE GSTVAIFGLGAVGLAVAEGARL ASKIIGVD+NPEKF
Sbjct: 180 CLLSCGVSTGIGAAWKVAEVEEGSTVAIFGLGAVGLAVAEGARLRGASKIIGVDLNPEKF 239
Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
EIGKKFG+T FINP CG+K VSQV+KEMTDGGADYCFECIGL S+M DAF+ SREGWGK
Sbjct: 240 EIGKKFGVTHFINPTACGEKAVSQVVKEMTDGGADYCFECIGLASLMKDAFDCSREGWGK 299
Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITH 360
TVILGVEMHGS +++NS +IL+GRSV G+ FGGLKP+SDI LA+KY+DKEL L EFITH
Sbjct: 300 TVILGVEMHGSDLNVNSSQILRGRSVMGSLFGGLKPKSDIPILAKKYIDKELRLDEFITH 359
Query: 361 EVSFHDINKAFDLLLEGKSLRCIIWMDK 388
EV+F DINKAF+ +GKS+RCIIWMDK
Sbjct: 360 EVNFQDINKAFEFQSQGKSIRCIIWMDK 387
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357465103|ref|XP_003602833.1| Alcohol dehydrogenase-like protein [Medicago truncatula] gi|355491881|gb|AES73084.1| Alcohol dehydrogenase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/378 (71%), Positives = 322/378 (85%), Gaps = 1/378 (0%)
Query: 11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
GK IRCKAAIC+ G+PLVIEE+E++PPK+WE+RIKILCTSLCHSDVTFWK ++ P
Sbjct: 13 GKPIRCKAAICKKSGEPLVIEEVELDPPKSWEVRIKILCTSLCHSDVTFWKMNSSAPTAR 72
Query: 71 LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
P I GHEAVG+VESVGE VEEVKE DLV+P+F +CGEC DC S+KSN C+KFG
Sbjct: 73 FPRILGHEAVGLVESVGENVEEVKEGDLVVPVFLPNCGECIDCGSTKSNNCTKFGNKPIR 132
Query: 131 NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
+MPRDGTSRFR++KG+V+HH L +SSF+EY+VVD+THVVKIT IPL ACLLSCGVSTG
Sbjct: 133 DMPRDGTSRFRDMKGEVVHHLLGVSSFSEYTVVDVTHVVKITHDIPLDKACLLSCGVSTG 192
Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
+GAAWKVA VE G+TVAIFGLGAVGLAVA A+ ASKIIGVD+N +KFEIGK+FGITD
Sbjct: 193 IGAAWKVADVEKGTTVAIFGLGAVGLAVAVAAKQRGASKIIGVDLNHDKFEIGKQFGITD 252
Query: 251 FINP-ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
F+NP +T +K+VS+VIK+MT+GGADYCFECIGL S+M +AFNSSREGWGKTVI+GVEMH
Sbjct: 253 FVNPSSTSNEKSVSEVIKDMTNGGADYCFECIGLASLMTEAFNSSREGWGKTVIIGVEMH 312
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
GSP++LN +ILKG+++ G+ FGGLKP+SD+ LAQKYLDKELNL FI+ EV F DINK
Sbjct: 313 GSPLTLNPYDILKGKTITGSLFGGLKPKSDLPLLAQKYLDKELNLDGFISQEVDFKDINK 372
Query: 370 AFDLLLEGKSLRCIIWMD 387
AFD LL+GKS+RCII MD
Sbjct: 373 AFDYLLQGKSIRCIIRMD 390
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115451243|ref|NP_001049222.1| Os03g0189400 [Oryza sativa Japonica Group] gi|108706592|gb|ABF94387.1| oxidoreductase, zinc-binding dehydrogenase family protein, expressed [Oryza sativa Japonica Group] gi|113547693|dbj|BAF11136.1| Os03g0189400 [Oryza sativa Japonica Group] gi|215695369|dbj|BAG90560.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/375 (67%), Positives = 294/375 (78%), Gaps = 2/375 (0%)
Query: 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
IRCKAA+CR G+PL +EEI V+PPKA E+RIKI+CTSLCHSDVTFW+ D P + P
Sbjct: 9 IRCKAAVCRAAGEPLAVEEIVVDPPKAHEVRIKIVCTSLCHSDVTFWRMQ-DFPGV-FPR 66
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
IFGHEA GVVESVGE+VE D V+P F C EC DC S +SN CS + RP MP
Sbjct: 67 IFGHEAFGVVESVGEHVEGFAAGDPVVPTFLGQCTECVDCASERSNVCSTYRFAVRPGMP 126
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
RDGT+RFR+ G IHHFL +SSF+EY+VVD VV++ P +P A LLSCG +TGVGA
Sbjct: 127 RDGTARFRDRHGAPIHHFLGVSSFSEYTVVDANQVVRVDPAVPPATASLLSCGATTGVGA 186
Query: 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
AWK+A VE GS+VAIFGLGAVGLAVAEGAR+ AS IIGVD+NPEK E+GKKFG+T FIN
Sbjct: 187 AWKLAKVEPGSSVAIFGLGAVGLAVAEGARICGASTIIGVDLNPEKHELGKKFGVTHFIN 246
Query: 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
P GDK VSQ I EMTDGGADYCFECIGL SVM+DAF SSREGWGKT+ILGVEMHG+P+
Sbjct: 247 PQELGDKPVSQAIIEMTDGGADYCFECIGLASVMSDAFRSSREGWGKTIILGVEMHGAPL 306
Query: 314 SLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDL 373
S+ S+EIL G+ V G+ FGG+KP+ DI LA KYL+KEL L +FITHEV DIN AFDL
Sbjct: 307 SIPSLEILNGKCVMGSLFGGVKPKQDIPILADKYLNKELELDKFITHEVPLKDINTAFDL 366
Query: 374 LLEGKSLRCIIWMDK 388
LL+GKSLRC IWMDK
Sbjct: 367 LLQGKSLRCTIWMDK 381
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297845266|ref|XP_002890514.1| hypothetical protein ARALYDRAFT_472484 [Arabidopsis lyrata subsp. lyrata] gi|297336356|gb|EFH66773.1| hypothetical protein ARALYDRAFT_472484 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/389 (64%), Positives = 309/389 (79%), Gaps = 2/389 (0%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
M+ S S GK IRCKAAI R G+ LVIEEI+V+PP+A+E+RIKILCTSLCH+DVTFW
Sbjct: 1 MDKASLSSTEGKPIRCKAAILRKAGEALVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFW 60
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
K + P P I GHEAVGVVES+G V+ K+ D+VLP+F C EC++CKS KSN
Sbjct: 61 KLESG-PLARFPRILGHEAVGVVESIGANVDGFKQGDVVLPVFQPQCEECKECKSPKSNW 119
Query: 121 CSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
C+++ + N R G TSRF++ G+VIHHF+ +SSFTEY+VVDI H+VKI+P IP+ I
Sbjct: 120 CTRYTNDFLSNTRRYGMTSRFKDSFGEVIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDI 179
Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
A LLSCGV+TG+GAAWKVA VE GSTVAIFGLGAVGLAVAEG RL A+KIIGVD+NP K
Sbjct: 180 AALLSCGVATGIGAAWKVADVEEGSTVAIFGLGAVGLAVAEGVRLRGATKIIGVDLNPAK 239
Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
FEIGK++G+TDF+NPA CG+KT+S+VI+EMT+ GADY FECIGL S+M +AFNS+R G G
Sbjct: 240 FEIGKRYGMTDFVNPALCGEKTISEVIREMTEVGADYSFECIGLASLMEEAFNSTRPGSG 299
Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359
KTVILG+E P+SL S ++L+GR++CGT FGGLKP+ DI L +YL KELNL IT
Sbjct: 300 KTVILGMEQKALPVSLGSYDLLRGRTICGTLFGGLKPKLDIPILVDRYLKKELNLDGLIT 359
Query: 360 HEVSFHDINKAFDLLLEGKSLRCIIWMDK 388
HE+SF +INKAFDLL EG S+RC++WMDK
Sbjct: 360 HELSFEEINKAFDLLAEGNSIRCVVWMDK 388
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15219884|ref|NP_173660.1| alcohol dehydrogenase-like 2 [Arabidopsis thaliana] gi|75337342|sp|Q9SK87.1|ADHL2_ARATH RecName: Full=Alcohol dehydrogenase-like 2 gi|6587844|gb|AAF18533.1|AC006551_19 Very similar to alcohol dehydrogenase [Arabidopsis thaliana] gi|50253432|gb|AAT71918.1| At1g22440 [Arabidopsis thaliana] gi|51972064|gb|AAU15136.1| At1g22440 [Arabidopsis thaliana] gi|332192121|gb|AEE30242.1| alcohol dehydrogenase-like 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/384 (65%), Positives = 306/384 (79%), Gaps = 2/384 (0%)
Query: 6 ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
AS GK IRCKAAI R G+PLVIEEI+V+PP+A+E+RIKILCTSLCH+DVTFWK +
Sbjct: 4 ASITEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSG 63
Query: 66 LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
P P I GHEAVGVVES+GE V+ K+ D+VLP+FH C EC++C S KSN C+K+
Sbjct: 64 -PLARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYT 122
Query: 126 RGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
Y N R G TSRF++ +G+ IHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLS
Sbjct: 123 NDYLSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLS 182
Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
C V+TG+GAAWKVA VE GSTV IFGLGAVGLAVAEG RL A+KIIGVD+NP KFEIGK
Sbjct: 183 CSVATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGK 242
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
+FGITDF+NPA CG+KT+S+VI+EMTD GADY FECIGL S+M +AF S+R G GKT++L
Sbjct: 243 RFGITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVL 302
Query: 305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 364
G+E PISL S ++L+GR+VCGT FGGLKP+ DI L +YL KELNL + ITHE+SF
Sbjct: 303 GMEQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSF 362
Query: 365 HDINKAFDLLLEGKSLRCIIWMDK 388
+INKAF LL EG S+RCIIWMDK
Sbjct: 363 EEINKAFHLLAEGNSIRCIIWMDK 386
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|212720660|ref|NP_001132441.1| putative alcohol dehydrogenase superfamily protein [Zea mays] gi|194694392|gb|ACF81280.1| unknown [Zea mays] gi|414865247|tpg|DAA43804.1| TPA: putative alcohol dehydrogenase superfamily protein [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/389 (65%), Positives = 301/389 (77%), Gaps = 8/389 (2%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
M N+ P IRCKAA+CR G+PL IEE+ V+ PKA E+RI+I+CTSLCHSDVTFW
Sbjct: 1 MENQGPKP-----IRCKAAVCRAAGEPLAIEEVVVDTPKAHEVRIRIICTSLCHSDVTFW 55
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
+ DLP +P IFGHEA GVVESVGE V+E D V+P F C EC DC+S++SN
Sbjct: 56 RMK-DLPD-NIPRIFGHEAFGVVESVGEQVDEFAAGDAVVPTFLGQCSECVDCRSARSNM 113
Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
CSK+ RP MPRDGT+RF + +G +HHF +SSF EY+VVD+ VVK+ P +P +A
Sbjct: 114 CSKYRFAVRPGMPRDGTTRFTDGQGRPLHHFFGVSSFAEYTVVDVNQVVKLNPAVPPALA 173
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
CLLSCG STGVGAAWK A VE GS+VAIFGLGAVGLAVAEGAR+ ASKIIGVDINPEK
Sbjct: 174 CLLSCGASTGVGAAWKQAKVEPGSSVAIFGLGAVGLAVAEGARICGASKIIGVDINPEKC 233
Query: 241 EIGKKFGITDFINPATCG-DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
E+GKKFG+T FINP G +K V Q I EMTDGGADYCFECIGL ++MNDAF SSR+GWG
Sbjct: 234 ELGKKFGVTHFINPKELGEEKPVHQAIAEMTDGGADYCFECIGLAALMNDAFRSSRDGWG 293
Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359
KT+ILGVEMHG+P+ ++ EIL G+SV G+ FGG+KP+ DI LA KY++KEL L +FIT
Sbjct: 294 KTIILGVEMHGAPLCISPHEILHGKSVIGSMFGGVKPKQDIPILADKYMNKELELDKFIT 353
Query: 360 HEVSFHDINKAFDLLLEGKSLRCIIWMDK 388
HEV DIN+AFDLLL+GKSLRC IWMDK
Sbjct: 354 HEVGLKDINQAFDLLLQGKSLRCTIWMDK 382
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|195626420|gb|ACG35040.1| alcohol dehydrogenase 1 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/389 (64%), Positives = 301/389 (77%), Gaps = 8/389 (2%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
M N+ P IRCKAA+CR G+PL IEE+ V+ PKA E+RI+I+CTSLCHSDVTFW
Sbjct: 1 MENQGPKP-----IRCKAAVCRAAGEPLAIEEVVVDTPKAHEVRIRIICTSLCHSDVTFW 55
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
+ DLP +P IFGHEA GVVESVGE V+E D V+P F C EC DC+S++SN
Sbjct: 56 RMK-DLPD-NIPRIFGHEAFGVVESVGEQVDEFAAGDAVVPTFLGQCSECVDCRSARSNM 113
Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
CSK+ RP MPRDGT+RF + +G +HHF +SSF EY+VVD+ VVK+ P +P +A
Sbjct: 114 CSKYRFAVRPGMPRDGTTRFTDGQGRPLHHFFGVSSFAEYTVVDVNQVVKLNPAVPPALA 173
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
CLLSCG STGVGAAWK A VE GS+VAIFGLGAVGLAVAEGAR+ ASKIIGVDINP+K
Sbjct: 174 CLLSCGASTGVGAAWKQAKVEPGSSVAIFGLGAVGLAVAEGARICGASKIIGVDINPDKC 233
Query: 241 EIGKKFGITDFINPATCG-DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
E+GKKFG+T FINP G +K V Q I EMTDGGADYCFECIGL ++MNDAF SSR+GWG
Sbjct: 234 ELGKKFGVTHFINPKELGEEKPVHQAIAEMTDGGADYCFECIGLAALMNDAFRSSRDGWG 293
Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359
KT+ILGVEMHG+P+ ++ EIL G+SV G+ FGG+KP+ DI LA KY++KEL L +FIT
Sbjct: 294 KTIILGVEMHGAPLCISPHEILHGKSVIGSMFGGVKPKQDIPILADKYMNKELELDKFIT 353
Query: 360 HEVSFHDINKAFDLLLEGKSLRCIIWMDK 388
HEV DIN+AFDLLL+GKSLRC IWMDK
Sbjct: 354 HEVGLKDINQAFDLLLQGKSLRCTIWMDK 382
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297845264|ref|XP_002890513.1| hypothetical protein ARALYDRAFT_472482 [Arabidopsis lyrata subsp. lyrata] gi|297336355|gb|EFH66772.1| hypothetical protein ARALYDRAFT_472482 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/389 (64%), Positives = 305/389 (78%), Gaps = 2/389 (0%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
M+N S S GK IRCKAAICR G+ LVIE+I V+PP+ +E+RIKILCTSLCH+D+TFW
Sbjct: 1 MDNTSFSSNEGKPIRCKAAICRKAGEALVIEDIHVDPPQPYEVRIKILCTSLCHTDLTFW 60
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
K P P I GHEAVGVVES+GE V K+ D+VLP+FH C EC+DCKSSK+N
Sbjct: 61 KLDFG-PISRFPRILGHEAVGVVESIGENVVGFKQGDVVLPVFHPYCEECKDCKSSKTNW 119
Query: 121 CSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
C ++ + N R G SRF++ G+VIHHFL +SSF+EY+VVDI H+VKI+P IP+
Sbjct: 120 CERYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDK 179
Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
A LLSCGVSTG+GAAWKVA VE GSTVA+FGLGAVGLAVAEGARL A+KIIG+D NP+K
Sbjct: 180 AALLSCGVSTGIGAAWKVANVEEGSTVAVFGLGAVGLAVAEGARLRGAAKIIGIDTNPDK 239
Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
FE+GKKFG TDFINP CG+K VS+V+KEMT GG DY FEC+GL S++N+AF S+R G G
Sbjct: 240 FELGKKFGFTDFINPTLCGEKKVSEVVKEMTKGGVDYSFECVGLASLLNEAFISTRTGTG 299
Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359
KTV+LG+E H +PISL S ++L+GR++CG+ FGGLK + DI L YL KELNL FIT
Sbjct: 300 KTVMLGMEKHAAPISLGSFDLLRGRNICGSLFGGLKSKLDIPILVDHYLKKELNLDSFIT 359
Query: 360 HEVSFHDINKAFDLLLEGKSLRCIIWMDK 388
HE++F +INKAF LL EGKSLRCI+WMDK
Sbjct: 360 HELNFKEINKAFALLEEGKSLRCILWMDK 388
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356554319|ref|XP_003545495.1| PREDICTED: alcohol dehydrogenase-like 7-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/389 (64%), Positives = 305/389 (78%), Gaps = 3/389 (0%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
M +K A+ G+ IRCKAAICR PG PL IEEI V PP E RI+++CTSLCHSDVTFW
Sbjct: 1 MEDKLATTSEGQPIRCKAAICRKPGSPLSIEEIIVAPPMPREARIRVICTSLCHSDVTFW 60
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120
K ++P P I GHEAVGVVESVGE V EV + D+V+PIF DCGEC DCKSSKSN
Sbjct: 61 K--MEVPPAICPRILGHEAVGVVESVGEDVTEVTKGDVVVPIFLPDCGECIDCKSSKSNL 118
Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
CSKF P MPR TSRF +LKGD+IHHFL +SSF+EY+VVDI H+ KI P IP A
Sbjct: 119 CSKFPFEVSPWMPRHATSRFTDLKGDIIHHFLFVSSFSEYTVVDIAHLTKIDPAIPPNRA 178
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
CLLSCGVSTGVGAAW+ AGVE GSTV IFGLG++GLAVAEGARL A++IIGVD+NPEK+
Sbjct: 179 CLLSCGVSTGVGAAWRTAGVEPGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVNPEKY 238
Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
E GKKFG+TDF++ +K+VSQVI EMT GGADYCFEC+G+ +++ +A+ S R+GWGK
Sbjct: 239 ETGKKFGLTDFVHAGESENKSVSQVIIEMTGGGADYCFECVGMATLVQEAYASCRKGWGK 298
Query: 301 TVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359
++LGVE GS +SL+ E+L G+S+ G FGGLKP+SD+ L ++Y+DKELNL EF+T
Sbjct: 299 AIVLGVEKPGSMLSLSCNEVLHSGKSLVGCLFGGLKPKSDVPILLKRYMDKELNLDEFVT 358
Query: 360 HEVSFHDINKAFDLLLEGKSLRCIIWMDK 388
HEV F DINKAFDLL+EG+ LRC+IWMD+
Sbjct: 359 HEVEFKDINKAFDLLIEGQCLRCVIWMDR 387
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 390 | ||||||
| TAIR|locus:2009512 | 386 | AT1G22440 [Arabidopsis thalian | 0.979 | 0.989 | 0.570 | 2.5e-113 | |
| TAIR|locus:2009522 | 388 | AT1G22430 [Arabidopsis thalian | 0.992 | 0.997 | 0.550 | 2.6e-111 | |
| TAIR|locus:2120663 | 389 | AT4G22110 [Arabidopsis thalian | 0.966 | 0.969 | 0.554 | 7.8e-110 | |
| TAIR|locus:2157627 | 390 | AT5G42250 [Arabidopsis thalian | 0.982 | 0.982 | 0.503 | 1e-100 | |
| TAIR|locus:2184575 | 381 | AT5G24760 [Arabidopsis thalian | 0.976 | 1.0 | 0.427 | 5.5e-77 | |
| TAIR|locus:2025237 | 379 | ADH1 "alcohol dehydrogenase 1" | 0.953 | 0.981 | 0.429 | 8.1e-76 | |
| TAIR|locus:2035619 | 394 | AT1G32780 [Arabidopsis thalian | 0.969 | 0.959 | 0.406 | 2.5e-72 | |
| ZFIN|ZDB-GENE-011003-1 | 376 | adh5 "alcohol dehydrogenase 5" | 0.938 | 0.973 | 0.407 | 3.2e-72 | |
| TIGR_CMR|SO_A0161 | 376 | SO_A0161 "zinc-containing alco | 0.956 | 0.992 | 0.387 | 3.3e-70 | |
| UNIPROTKB|J9PA83 | 374 | ADH5 "Uncharacterized protein" | 0.941 | 0.981 | 0.408 | 4.3e-70 |
| TAIR|locus:2009512 AT1G22440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 219/384 (57%), Positives = 267/384 (69%)
Query: 6 ASPKAGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTD 65
AS GK IRCKAAI R G+PL +A+E+RIKILCTSLCH+DVTFWK +
Sbjct: 4 ASITEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSG 63
Query: 66 LPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
P P I D+VLP+FH C EC++C S KSN C+K+
Sbjct: 64 -PLARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYT 122
Query: 126 RGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
Y N R G TSRF++ +G+ IHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLS
Sbjct: 123 NDYLSNTRRYGMTSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLS 182
Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGK 244
C V+TG+GAAWKVA VE GSTV IF RL A+KIIGVD+NP KFEIGK
Sbjct: 183 CSVATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGK 242
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
+FGITDF+NPA CG+KT+S+VI+EMTD GADY FECIGL S+M +AF S+R G GKT++L
Sbjct: 243 RFGITDFVNPALCGEKTISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVL 302
Query: 305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 364
G+E PISL S ++L+GR+VCGT FGGLKP+ DI L +YL KELNL + ITHE+SF
Sbjct: 303 GMEQKALPISLGSYDLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSF 362
Query: 365 HDINKAFDLLLEGKSLRCIIWMDK 388
+INKAF LL EG S+RCIIWMDK
Sbjct: 363 EEINKAFHLLAEGNSIRCIIWMDK 386
|
|
| TAIR|locus:2009522 AT1G22430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 214/389 (55%), Positives = 265/389 (68%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFW 60
M+ S GK I CKAAICR G+ L +A+E+RIKILCTSLCH+D+TFW
Sbjct: 1 MDKTFFSSNEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFW 60
Query: 61 KSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNT 120
K S P P I D+VLP+FH C EC+DCKSSK+N
Sbjct: 61 KLSFG-PISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNW 119
Query: 121 CSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
C ++ + N R G SRF++ G+VIHHFL +SSF+EY+VVDI H+VKI+P IP+
Sbjct: 120 CDRYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDK 179
Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEK 239
A LLSCGVSTG+GAAWKVA VE GST+AIF RL A+KIIG+D N +K
Sbjct: 180 AALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDK 239
Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
FE+GKKFG TDFINP CG+K +S+VIKEMT+GG DY FEC+GL S++N+AF S+R G G
Sbjct: 240 FELGKKFGFTDFINPTLCGEKKISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTG 299
Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359
KTV+LG+E H +PISL S ++L+GR +CG+ FGGLK + DI L YL KELNL FIT
Sbjct: 300 KTVMLGMEKHAAPISLGSFDLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFIT 359
Query: 360 HEVSFHDINKAFDLLLEGKSLRCIIWMDK 388
HE++F +INKAF LL EGKSLRCI+WMDK
Sbjct: 360 HELNFKEINKAFALLEEGKSLRCILWMDK 388
|
|
| TAIR|locus:2120663 AT4G22110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
Identities = 210/379 (55%), Positives = 263/379 (69%)
Query: 11 GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
GK IRCKAA+ R PG+ L +A+E+RIKI+CTSLCH+DV+F K + P
Sbjct: 12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSG-PLAR 70
Query: 71 LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
P I D+VLP+FH C ECRDCKSSKSN C++F +
Sbjct: 71 FPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLS 130
Query: 131 NMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
N R G TSRF++ G+ I+HFL +SSF+EY+VVDI H+VKI+P IP+ A LLSCGVST
Sbjct: 131 NTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVST 190
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
G+GAAWKVA VE GSTVA+F RL A KIIGVD+NPEKFE+GKKFG T
Sbjct: 191 GIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFT 250
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
DFIN CG+ +S+VIKEMT GG DY FEC+GL S++ +AF+S+R G GKTV+LG++ H
Sbjct: 251 DFINSTLCGENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKH 310
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
+P+SL S ++L+GR VCG+ FGGLKP+ DI L YL KELNL FITHE+ F +INK
Sbjct: 311 LTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINK 370
Query: 370 AFDLLLEGKSLRCIIWMDK 388
AFDLL++GKSLRCI+WM+K
Sbjct: 371 AFDLLVQGKSLRCILWMNK 389
|
|
| TAIR|locus:2157627 AT5G42250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 999 (356.7 bits), Expect = 1.0e-100, P = 1.0e-100
Identities = 195/387 (50%), Positives = 253/387 (65%)
Query: 2 NNKSASPKAGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWK 61
N+ S + + K IRCKAA+ R G+PL + +E+RI+I+CT+LCHSDVTFWK
Sbjct: 5 NSSSDNKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWK 64
Query: 62 SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTC 121
+P P I D VLP F DCG+C DCKS KSN C
Sbjct: 65 --LQVPPACFPRILGHEAIGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLC 122
Query: 122 SKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
SKF P MPR D +SRF +L G+ + HFLN+SSF+EY+V+D+ +VVKI IP A
Sbjct: 123 SKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRA 182
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKF 240
CLLSCGVSTGVGAAW+ A VE GSTV IF RL AS+IIGVDINP KF
Sbjct: 183 CLLSCGVSTGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKF 242
Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
++G+KFG+T+F+N TC VS+VI EMTDGGADYCFEC+G +S++ +A+ R+GWGK
Sbjct: 243 QVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGK 302
Query: 301 TVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359
T+ LGV+ GS I L+S ++L G+ + G+ FGGLK ++ I L ++YL EL L +F+T
Sbjct: 303 TITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVT 362
Query: 360 HEVSFHDINKAFDLLLEGKSLRCIIWM 386
HE+ F +IN AF LLLEGK +RC++WM
Sbjct: 363 HEMKFEEINDAFQLLLEGKCIRCVLWM 389
|
|
| TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 166/388 (42%), Positives = 223/388 (57%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFW 60
M+ S+S + +VI C AA+ G+PL + EIRIK++CTSLC SD++ W
Sbjct: 1 MSASSSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAW 60
Query: 61 KSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNT 120
+S + LP+ IF D VL +F +CG CR C S KSN
Sbjct: 61 ESQSLLPR-----IFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNM 115
Query: 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180
C G + M D +RF +KG ++H+ +SSF+EY+VV VK+ P PL
Sbjct: 116 CQVLGMERKGLMHSDQKTRF-SIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKI 174
Query: 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKF 240
CLLSCGV+ G+GAAW VA V+ GS+V IF +L A++I+GVDINP K
Sbjct: 175 CLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKA 234
Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
E K FG+TDFIN + + QVIK MT GGAD+ FEC+G T + A S +GWG
Sbjct: 235 EQAKTFGVTDFINSNDLSEP-IPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGM 293
Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITH 360
TV LGV +S + L G+S+ GT FGG KP+SD+ +L KY++KE+ + EFITH
Sbjct: 294 TVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITH 353
Query: 361 EVSFHDINKAFDLLLEGKSLRCIIWMDK 388
+SF +INKAF L+ EGK LRC++ M K
Sbjct: 354 NLSFDEINKAFVLMREGKCLRCVLHMPK 381
|
|
| TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 162/377 (42%), Positives = 213/377 (56%)
Query: 11 GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
G++IRCKAA+ GKPL + E+RIKIL TSLCH+DV FW++ P P
Sbjct: 5 GQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFP 64
Query: 71 LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYR 129
IF D VLPIF +CGECR C S +SN C R
Sbjct: 65 R--IFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTER 122
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
M DG SRF + G I+HFL S+F+EY+VV V KI P PL C++SCG+ST
Sbjct: 123 GGMIHDGESRF-SINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLST 181
Query: 190 GVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGIT 249
G+GA VA + G +VAIF R+ AS+IIGVD N ++F+ K+FG+T
Sbjct: 182 GLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVT 241
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
+ +NP DK + QVI EMTDGG D EC G M AF +GWG V++GV
Sbjct: 242 ECVNPKD-HDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSK 300
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
+ + L R++ GT+FG KP++DI + +KY++KEL L +FITH V F +INK
Sbjct: 301 DDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINK 360
Query: 370 AFDLLLEGKSLRCIIWM 386
AFD +L+G+S+RCII M
Sbjct: 361 AFDYMLKGESIRCIITM 377
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| TAIR|locus:2035619 AT1G32780 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 158/389 (40%), Positives = 216/389 (55%)
Query: 11 GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
GKVI CKAA+ P PL + E+R+KIL +S+CH+D+ W + + +
Sbjct: 6 GKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERA- 64
Query: 71 LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG-YR 129
P I D V+P F+ +CGEC+ CK +SN C ++ +
Sbjct: 65 FPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMK 124
Query: 130 PNMPRDGTSRFREL--------KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181
M DG +RF + I+HFLN S+FTEY+V+D VVKI P+ PL
Sbjct: 125 RVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMS 184
Query: 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFE 241
LLSCGVSTGVGAAW +A V+ G + A+F R AS+IIGVD N KFE
Sbjct: 185 LLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKFE 244
Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKT 301
GK G+TDFINP K V Q+I+E+T GG DY FEC G V+ +AF S+ GWG T
Sbjct: 245 KGKLMGVTDFINPKDL-TKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGST 303
Query: 302 VILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHE 361
V++G+ + L+ +E+ GR + G+ FGG KP+S + AQ+ + + L FIT+E
Sbjct: 304 VLVGIYPTPRTLPLHPMELFDGRRITGSVFGGFKPKSQLPNFAQQCMKGVVKLEPFITNE 363
Query: 362 VSFHDINKAFDLLLEGKSLRCIIWMDKLI 390
+ F IN AF LL +GKSLRCI+ + KL+
Sbjct: 364 LPFEKINDAFQLLRDGKSLRCILQISKLL 392
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| ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 154/378 (40%), Positives = 212/378 (56%)
Query: 11 GKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP 70
GKVI+CKAA+ GKPL KA E+R+KI T +CH+D + S +D P+
Sbjct: 5 GKVIKCKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDA-YTLSGSD-PEGL 62
Query: 71 LPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GR 126
PVI D V+P++ CGEC+ CK+ K+N C K G+
Sbjct: 63 FPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQ 122
Query: 127 GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 186
G P D TSRF KG + HF+ S+F+EY+VV + K+ H PL CLL CG
Sbjct: 123 GLMP----DNTSRFT-CKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCG 177
Query: 187 VSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKF 246
+STG GAA A VE GST A+F + A++IIG+D+NP+KFEI KKF
Sbjct: 178 ISTGYGAAINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKF 237
Query: 247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
G T+F+NP K + +V+ E+TDGG DY FECIG +M A + +GWG +VI+GV
Sbjct: 238 GATEFVNPKD-HSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGV 296
Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHD 366
G IS +++ GR+ GT FGG K + L Y++K+L + EF+TH + F
Sbjct: 297 AGAGQEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTHTLPFAQ 356
Query: 367 INKAFDLLLEGKSLRCII 384
IN+AFDL+ GKS+R ++
Sbjct: 357 INEAFDLMHAGKSIRAVL 374
|
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| TIGR_CMR|SO_A0161 SO_A0161 "zinc-containing alcohol dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 146/377 (38%), Positives = 210/377 (55%)
Query: 12 KVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL 71
++++ KAA+ G+PL + E+R+K++ T +CH+D F S D P+
Sbjct: 4 QILKSKAAVAWAVGEPLSIEIVDVMPPQKGEVRVKMIATGVCHTDA-FTLSGDD-PEGIF 61
Query: 72 PVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
P I D V+P++ +CGEC+ CKS K+N C K
Sbjct: 62 PCILGHEGGGIVESIGEGVTSVQVGDHVIPLYTPECGECKFCKSGKTNLCQKIRETQGKG 121
Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGV 191
+ DGTSRF + G +I+H++ S+F+EY+V+ + K+ P PL CLL CGV+TG+
Sbjct: 122 LMPDGTSRFSK-DGQIIYHYMGTSTFSEYTVLPEISLAKVNPDAPLEEVCLLGCGVTTGM 180
Query: 192 GAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDF 251
GA A VE G+TVAIF + +AS+II +DIN KFE+ K G TDF
Sbjct: 181 GAVMNTAKVEEGATVAIFGMGGIGLSAVIGATMAKASRIIVIDINESKFELAGKLGATDF 240
Query: 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS 311
INP DK + VI E+TDGG DY FECIG +VM A +GWG++V++GV G
Sbjct: 241 INPKDY-DKPIQDVIVELTDGGVDYSFECIGNVNVMRSALECCHKGWGESVVIGVAGAGQ 299
Query: 312 PISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAF 371
IS +++ GR G+ FGG+K RS++ ++YL E L +FITH +S +N AF
Sbjct: 300 EISTRPFQLVTGRVWKGSAFGGVKGRSELPEYVERYLAGEFKLSDFITHTMSLEQVNDAF 359
Query: 372 DLLLEGKSLRCIIWMDK 388
DL+ +GKS+R +I DK
Sbjct: 360 DLMHQGKSIRTVIHFDK 376
|
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| UNIPROTKB|J9PA83 ADH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 155/379 (40%), Positives = 210/379 (55%)
Query: 10 AGKVIRCKAAICRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
A +VI+CKAA+ GKPL KA E+RIKI+ T++CH+D + S D P+
Sbjct: 2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDA-YTLSGAD-PEG 59
Query: 70 PLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----G 125
PVI D V+P++ CGEC+ C + K+N C K G
Sbjct: 60 SFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 119
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
+G P DGTSRF KG I H++ S+F+EY+VV V KI P PL CLL C
Sbjct: 120 KGLMP----DGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGC 174
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKK 245
G+STG GAA A VE GST A+F ++ AS+IIGVDIN +KF K+
Sbjct: 175 GISTGYGAALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKE 234
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
FG ++ INP K + +V+ EMTDGG DY FECIG VM A + +GWG +VI+G
Sbjct: 235 FGASECINPQDFS-KPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVG 293
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH 365
V G I+ +++ GR GT FGG K + L +Y+ +++ + EF+TH +SF
Sbjct: 294 VAASGEEIATRPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFD 353
Query: 366 DINKAFDLLLEGKSLRCII 384
IN+AFDLL GKS+R ++
Sbjct: 354 QINEAFDLLHAGKSIRTVV 372
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q4R1E8 | ADH2_ORYSI | 1, ., 1, ., 1, ., 1 | 0.5026 | 0.9512 | 0.9788 | N/A | no |
| P19854 | ADHX_HORSE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4775 | 0.9410 | 0.9812 | yes | no |
| P14674 | ADH2_SOLTU | 1, ., 1, ., 1, ., 1 | 0.5130 | 0.9666 | 0.9921 | N/A | no |
| P14675 | ADH3_SOLTU | 1, ., 1, ., 1, ., 1 | 0.5130 | 0.9666 | 0.9921 | N/A | no |
| A2XAZ3 | ADHX_ORYSI | 1, ., 1, ., 1, ., 2, 8, 4 | 0.5038 | 0.9641 | 0.9868 | N/A | no |
| P14673 | ADH1_SOLTU | 1, ., 1, ., 1, ., 1 | 0.5130 | 0.9666 | 0.9921 | N/A | no |
| P12711 | ADHX_RAT | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4829 | 0.9461 | 0.9866 | yes | no |
| P11766 | ADHX_HUMAN | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4802 | 0.9410 | 0.9812 | yes | no |
| P28032 | ADH2_SOLLC | 1, ., 1, ., 1, ., 1 | 0.5118 | 0.9641 | 0.9894 | N/A | no |
| P80572 | ADHX_PEA | 1, ., 1, ., 1, ., 2, 8, 4 | 0.5052 | 0.9410 | 0.9708 | N/A | no |
| P48977 | ADH_MALDO | 1, ., 1, ., 1, ., 1 | 0.5091 | 0.9692 | 0.9947 | N/A | no |
| Q9SK87 | ADHL2_ARATH | 1, ., 1, ., 1, ., 1 | 0.6588 | 0.9794 | 0.9896 | yes | no |
| P04707 | ADH2_MAIZE | 1, ., 1, ., 1, ., 1 | 0.5039 | 0.9487 | 0.9762 | N/A | no |
| P46415 | ADHX_DROME | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4775 | 0.9615 | 0.9894 | yes | no |
| Q3ZC42 | ADHX_BOVIN | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4749 | 0.9410 | 0.9812 | yes | no |
| P25141 | ADH1_PETHY | 1, ., 1, ., 1, ., 1 | 0.5221 | 0.9717 | 0.9921 | N/A | no |
| P32771 | FADH_YEAST | 1, ., 1, ., 1, ., - | 0.4435 | 0.9692 | 0.9792 | yes | no |
| P14219 | ADH1_PENAM | 1, ., 1, ., 1, ., 1 | 0.5026 | 0.9615 | 0.9894 | N/A | no |
| P28474 | ADHX_MOUSE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4803 | 0.9461 | 0.9866 | yes | no |
| Q54TC2 | ADHX_DICDI | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4710 | 0.9410 | 0.9683 | yes | no |
| P13603 | ADH1_TRIRP | 1, ., 1, ., 1, ., 1 | 0.5013 | 0.9692 | 0.9947 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.976 |
| 4th Layer | 1.1.1.1 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00015186001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (387 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00036847001 | SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (485 aa) | • | 0.899 | |||||||
 | GSVIVG00035907001 | SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (215 aa) | • | 0.899 | |||||||
 | GSVIVG00034061001 | SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (450 aa) | • | 0.899 | |||||||
 | GSVIVG00028844001 | SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (538 aa) | • | 0.899 | |||||||
 | GSVIVG00024617001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (485 aa) | • | 0.899 | |||||||
 | GSVIVG00024065001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (607 aa) | • | 0.899 | |||||||
 | GSVIVG00020768001 | SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (531 aa) | • | 0.899 | |||||||
 | GSVIVG00019283001 | SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (549 aa) | • | 0.899 | |||||||
 | GSVIVG00016425001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (362 aa) | • | 0.899 | |||||||
 | GSVIVG00016121001 | SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (511 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 390 | |||
| cd08301 | 369 | cd08301, alcohol_DH_plants, Plant alcohol dehydrog | 0.0 | |
| PLN02740 | 381 | PLN02740, PLN02740, Alcohol dehydrogenase-like | 1e-166 | |
| cd08277 | 365 | cd08277, liver_alcohol_DH_like, Liver alcohol dehy | 1e-163 | |
| cd08300 | 368 | cd08300, alcohol_DH_class_III, class III alcohol d | 1e-158 | |
| PLN02827 | 378 | PLN02827, PLN02827, Alcohol dehydrogenase-like | 1e-147 | |
| cd08299 | 373 | cd08299, alcohol_DH_class_I_II_IV, class I, II, IV | 1e-143 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 1e-133 | |
| cd05279 | 365 | cd05279, Zn_ADH1, Liver alcohol dehydrogenase and | 1e-129 | |
| TIGR02818 | 368 | TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat | 1e-123 | |
| cd08279 | 363 | cd08279, Zn_ADH_class_III, Class III alcohol dehyd | 1e-119 | |
| cd08281 | 371 | cd08281, liver_ADH_like1, Zinc-dependent alcohol d | 5e-85 | |
| cd08278 | 365 | cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro | 1e-84 | |
| TIGR03989 | 369 | TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa | 6e-80 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 4e-63 | |
| TIGR03451 | 358 | TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi | 3e-58 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 2e-53 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 9e-51 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 3e-50 | |
| cd08231 | 361 | cd08231, MDR_TM0436_like, Hypothetical enzyme TM04 | 2e-49 | |
| cd08235 | 343 | cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas | 3e-49 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 3e-46 | |
| cd05278 | 347 | cd05278, FDH_like, Formaldehyde dehydrogenases | 1e-45 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 5e-45 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 4e-44 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 7e-44 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 1e-42 | |
| cd08233 | 351 | cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio | 1e-42 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 3e-40 | |
| cd05285 | 343 | cd05285, sorbitol_DH, Sorbitol dehydrogenase | 2e-39 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 2e-39 | |
| cd08239 | 339 | cd08239, THR_DH_like, L-threonine dehydrogenase (T | 3e-39 | |
| cd05281 | 341 | cd05281, TDH, Threonine dehydrogenase | 4e-37 | |
| cd08240 | 350 | cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa | 2e-36 | |
| TIGR00692 | 340 | TIGR00692, tdh, L-threonine 3-dehydrogenase | 4e-35 | |
| cd08285 | 351 | cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd | 9e-35 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 5e-34 | |
| cd05284 | 340 | cd05284, arabinose_DH_like, D-arabinose dehydrogen | 3e-32 | |
| PRK05396 | 341 | PRK05396, tdh, L-threonine 3-dehydrogenase; Valida | 5e-32 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 1e-31 | |
| cd08286 | 345 | cd08286, FDH_like_ADH2, formaldehyde dehydrogenase | 1e-30 | |
| cd08283 | 386 | cd08283, FDH_like_1, Glutathione-dependent formald | 5e-29 | |
| cd08287 | 345 | cd08287, FDH_like_ADH3, formaldehyde dehydrogenase | 2e-26 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 5e-26 | |
| cd08232 | 339 | cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | 8e-26 | |
| cd08298 | 329 | cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA | 2e-24 | |
| cd08284 | 344 | cd08284, FDH_like_2, Glutathione-dependent formald | 3e-24 | |
| cd08265 | 384 | cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD | 1e-23 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 1e-22 | |
| cd08296 | 333 | cd08296, CAD_like, Cinnamyl alcohol dehydrogenases | 1e-22 | |
| cd08269 | 312 | cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD | 1e-22 | |
| cd05283 | 337 | cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA | 6e-22 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 6e-22 | |
| pfam08240 | 108 | pfam08240, ADH_N, Alcohol dehydrogenase GroES-like | 6e-21 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 9e-21 | |
| PRK09422 | 338 | PRK09422, PRK09422, ethanol-active dehydrogenase/a | 1e-20 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 8e-20 | |
| cd08262 | 341 | cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD | 2e-19 | |
| cd08256 | 350 | cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD | 3e-19 | |
| TIGR03201 | 349 | TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1 | 4e-18 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 1e-17 | |
| PRK10083 | 339 | PRK10083, PRK10083, putative oxidoreductase; Provi | 2e-14 | |
| TIGR03366 | 280 | TIGR03366, HpnZ_proposed, putative phosphonate cat | 2e-14 | |
| cd08230 | 355 | cd08230, glucose_DH, Glucose dehydrogenase | 5e-14 | |
| TIGR02819 | 393 | TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas | 5e-14 | |
| PRK10309 | 347 | PRK10309, PRK10309, galactitol-1-phosphate dehydro | 8e-14 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 9e-14 | |
| PLN02702 | 364 | PLN02702, PLN02702, L-idonate 5-dehydrogenase | 1e-13 | |
| cd08282 | 375 | cd08282, PFDH_like, Pseudomonas putida aldehyde-di | 5e-13 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 7e-13 | |
| PLN02178 | 375 | PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | 1e-11 | |
| cd08282 | 375 | cd08282, PFDH_like, Pseudomonas putida aldehyde-di | 5e-11 | |
| PRK09880 | 343 | PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro | 2e-10 | |
| PLN02586 | 360 | PLN02586, PLN02586, probable cinnamyl alcohol dehy | 3e-10 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 2e-09 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 2e-09 | |
| cd08242 | 319 | cd08242, MDR_like, Medium chain dehydrogenases/red | 1e-08 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 2e-08 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 4e-08 | |
| PLN02514 | 357 | PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | 7e-08 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 8e-08 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 2e-07 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 7e-07 | |
| cd08292 | 324 | cd08292, ETR_like_2, 2-enoyl thioester reductase ( | 8e-07 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 1e-06 | |
| cd08247 | 352 | cd08247, AST1_like, AST1 is a cytoplasmic protein | 3e-06 | |
| cd08238 | 410 | cd08238, sorbose_phosphate_red, L-sorbose-1-phosph | 8e-06 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 1e-05 | |
| TIGR02822 | 329 | TIGR02822, adh_fam_2, zinc-binding alcohol dehydro | 2e-05 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 4e-05 | |
| cd08291 | 324 | cd08291, ETR_like_1, 2-enoyl thioester reductase ( | 9e-05 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 2e-04 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 6e-04 | |
| cd01075 | 200 | cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d | 6e-04 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 7e-04 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 0.001 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 0.003 |
| >gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 582 bits (1503), Expect = 0.0
Identities = 211/373 (56%), Positives = 258/373 (69%), Gaps = 5/373 (1%)
Query: 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
I CKAA+ GKPLVIEE+EV PP+A E+RIKIL TSLCH+DV FW++ P P
Sbjct: 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPR-- 58
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-M 132
I GHEA G+VESVGE V ++K D VLP+F +C ECR CKS KSN C M
Sbjct: 59 ILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVM 118
Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVG 192
DG SRF + G I+HF+ S+F+EY+VV + V KI P PL CLLSCGVSTG+G
Sbjct: 119 INDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLG 177
Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
AAW VA V+ GSTVAIFGLGAVGLAVAEGAR+ AS+IIGVD+NP KFE KKFG+T+F+
Sbjct: 178 AAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV 237
Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
NP DK V +VI EMT GG DY FEC G M AF +GWG TV+LGV +
Sbjct: 238 NPKDH-DKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAV 296
Query: 313 ISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 372
S + + +L GR++ GT FGG KP++D+ L +KY+ KEL L +FITHE+ F +INKAFD
Sbjct: 297 FSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFD 356
Query: 373 LLLEGKSLRCIIW 385
LLL+G+ LRCI+
Sbjct: 357 LLLKGECLRCILH 369
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369 |
| >gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 469 bits (1209), Expect = e-166
Identities = 209/383 (54%), Positives = 268/383 (69%), Gaps = 8/383 (2%)
Query: 6 ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD 65
AS GKVI CKAA+ PG+PLV+EEI V+PP+ E+RIKIL TS+CH+D++ WK +
Sbjct: 1 ASETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE 60
Query: 66 LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG 125
+ P I GHEA G+VESVGE VE++K D V+PIF+ +CG+CR CK K+N C +
Sbjct: 61 AQR-AYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYR 119
Query: 126 -RGYRPNMPRDGTSRFRELK-GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL 183
++ M DG +RF G I+HFLN S+FTEY+V+D VVKI P+ PL LL
Sbjct: 120 VDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLL 179
Query: 184 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243
SCGVSTGVGAAW A V+ GS+VAIFGLGAVGLAVAEGAR ASKIIGVDINPEKFE G
Sbjct: 180 SCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG 239
Query: 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVI 303
K+ GITDFINP DK V + I+EMT GG DY FEC G V+ +AF S+ +GWG TV+
Sbjct: 240 KEMGITDFINPKDS-DKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVL 298
Query: 304 LGVEMHGSP--ISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHE 361
LG+ H +P + L+ +E+ GRS+ G+ FG K +S + LA++ + +NL FITHE
Sbjct: 299 LGI--HPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHE 356
Query: 362 VSFHDINKAFDLLLEGKSLRCII 384
+ F IN+AF LL +GK+LRC++
Sbjct: 357 LPFEKINEAFQLLEDGKALRCLL 379
|
Length = 381 |
| >gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 462 bits (1190), Expect = e-163
Identities = 194/371 (52%), Positives = 252/371 (67%), Gaps = 7/371 (1%)
Query: 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
I+CKAA+ GKPLVIEEIEV PPKA E+RIK+L TS+CH+D+ + PV
Sbjct: 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGF---KATLFPV 57
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
I GHE G+VESVGE V +K D V+P+F CGEC +C+S K+N C K+ MP
Sbjct: 58 ILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMP 117
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
DGTSRF KG I+HFL S+F++Y+VVD +V KI P PL CLL CG STG GA
Sbjct: 118 -DGTSRF-TCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGA 175
Query: 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
AW A VE GSTVA+FGLGAVGL+ GA++ AS+IIGVDIN +KFE K+FG TDFIN
Sbjct: 176 AWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFIN 235
Query: 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
P DK VS+VI+EMT GG DY FEC G +MN+A S++ GWG +V++GV G+ +
Sbjct: 236 PKDS-DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVP-PGAEL 293
Query: 314 SLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDL 373
S+ +++ GR+ G++FGG K RSD+ L KY++K+ +L E ITH + F +INK FDL
Sbjct: 294 SIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDL 353
Query: 374 LLEGKSLRCII 384
+ G+ +R +I
Sbjct: 354 MKSGECIRTVI 364
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 448 bits (1155), Expect = e-158
Identities = 195/375 (52%), Positives = 245/375 (65%), Gaps = 12/375 (3%)
Query: 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
I CKAA+ GKPL IEE+EV PPKA E+RIKIL T +CH+D S D P+ PV
Sbjct: 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTL-SGAD-PEGLFPV 58
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYR 129
I GHE G+VESVGE V VK D V+P++ +CGEC+ CKS K+N C K G+G
Sbjct: 59 ILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGL- 117
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
MP DGTSRF KG I+HF+ S+F+EY+VV V KI P PL CLL CGV+T
Sbjct: 118 --MP-DGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTT 173
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
G GA A VE GSTVA+FGLGAVGLAV +GA+ AS+IIG+DINP+KFE+ KKFG T
Sbjct: 174 GYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGAT 233
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
D +NP DK + QV+ EMTDGG DY FECIG VM A + +GWG +VI+GV
Sbjct: 234 DCVNPKDH-DKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAA 292
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
G IS +++ GR GT FGG K RS + L + Y+ ++ + EFITH + +IN+
Sbjct: 293 GQEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINE 352
Query: 370 AFDLLLEGKSLRCII 384
AFDL+ GKS+R ++
Sbjct: 353 AFDLMHAGKSIRTVV 367
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368 |
| >gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 420 bits (1081), Expect = e-147
Identities = 196/384 (51%), Positives = 255/384 (66%), Gaps = 7/384 (1%)
Query: 5 SASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST 64
S+S VI C+AA+ G+ LV+EE+EV PP+ EIRIK++ TSLC SD++ W+S
Sbjct: 2 SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA 61
Query: 65 DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 124
P+ IFGHEA G+VES+GE V E ++ D VL +F +CG CR C S KSN C
Sbjct: 62 LFPR-----IFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVL 116
Query: 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
G + M D +RF +KG ++H+ +SSF+EY+VV VK+ P PL CLLS
Sbjct: 117 GLERKGVMHSDQKTRF-SIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLS 175
Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
CGV+ G+GAAW VA V GS+V IFGLG VGL+VA+GA+L AS+IIGVDINPEK E K
Sbjct: 176 CGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK 235
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
FG+TDFINP + + QVIK MT GGADY FEC+G T + A S +GWG TV L
Sbjct: 236 TFGVTDFINPNDL-SEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTL 294
Query: 305 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 364
GV +S + L GR++ G+ FGG KP+SD+ +L KY++KE+ + EFITH +SF
Sbjct: 295 GVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF 354
Query: 365 HDINKAFDLLLEGKSLRCIIWMDK 388
+INKAF+L+ EGK LRC+I M K
Sbjct: 355 DEINKAFELMREGKCLRCVIHMPK 378
|
Length = 378 |
| >gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 410 bits (1057), Expect = e-143
Identities = 180/375 (48%), Positives = 225/375 (60%), Gaps = 5/375 (1%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
AGKVI+CKAA+ P KP IEEIEV PPKA E+RIKI+ T +C SD
Sbjct: 2 AGKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL---VT 58
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
P PVI GHEA G+VESVGE V VK D V+P+F CG+CR C + +SN C K G
Sbjct: 59 PFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKP 118
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
+ +DGTSRF KG IHHFL S+F+EY+VVD V KI PL CL+ CG ST
Sbjct: 119 QGLMQDGTSRF-TCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFST 177
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
G GAA A V GST A+FGLG VGL+ G + AS+II VDIN +KF K+ G T
Sbjct: 178 GYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGAT 237
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
+ INP K + +V+ EMTDGG D+ FE IG M A S EG+G +VI+GV
Sbjct: 238 ECINPQDY-KKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
+S+N + +L GR+ G FGG K + + L Y+ K+ NL ITH + F IN+
Sbjct: 297 SQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINE 356
Query: 370 AFDLLLEGKSLRCII 384
FDLL GKS+R ++
Sbjct: 357 GFDLLRSGKSIRTVL 371
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 384 bits (989), Expect = e-133
Identities = 171/375 (45%), Positives = 230/375 (61%), Gaps = 15/375 (4%)
Query: 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
++ +AA+ R GKPL IEE++++PP+A E+ ++I T +CH+D S D P+ P
Sbjct: 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHT--LSGDDPE-GFPA 57
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYR 129
+ GHE G+VE+VGE V VK D V+ +F +CG+C+ C S K N C G+G
Sbjct: 58 VLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM 117
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
P DGT+R G ++H+L S+F EY+VV +VKI P PL ACLL CGV+T
Sbjct: 118 P----DGTTRL-SGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTT 172
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
G+GA A VE G TVA+FGLG VGLA +GA+ A +II VDINPEK E+ KKFG T
Sbjct: 173 GIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGAT 232
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
F+NP D V + I E+TDGGADY FEC+G VM A ++ G +VI+GV
Sbjct: 233 HFVNPKEVDD--VVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGA 289
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
G IS +++ GR G+ FGG +PRSDI L Y+ +L L +TH + DIN+
Sbjct: 290 GQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINE 349
Query: 370 AFDLLLEGKSLRCII 384
AFDL+ EGKS+R +I
Sbjct: 350 AFDLMHEGKSIRSVI 364
|
Length = 366 |
| >gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 374 bits (963), Expect = e-129
Identities = 175/370 (47%), Positives = 228/370 (61%), Gaps = 7/370 (1%)
Query: 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
CKAA+ GKPL IEEIEV PPKA E+RIK++ T +CH+D+ LP PLPVI
Sbjct: 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHV--IDGKLPT-PLPVIL 57
Query: 76 GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPR 134
GHE G+VES+G V +K D V+P+F CG+C+ C + + N CSK G R M
Sbjct: 58 GHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMS- 116
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
DGTSRF KG IHHFL S+F EY+VV + KI P PL CL+ CG STG GAA
Sbjct: 117 DGTSRF-TCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAA 175
Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
A V GST A+FGLG VGL+V G + AS+II VDIN +KFE K+ G T+ INP
Sbjct: 176 VNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINP 235
Query: 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 314
DK + +V+ EMTDGG DY FE IG + A +++R G G +V++GV G+ +
Sbjct: 236 RD-QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEAT 294
Query: 315 LNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLL 374
L+ ++L GR++ GT FGG K + + L Y K+ L E ITH + F +IN FDL+
Sbjct: 295 LDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLM 354
Query: 375 LEGKSLRCII 384
G+S+R I+
Sbjct: 355 RSGESIRTIL 364
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 359 bits (922), Expect = e-123
Identities = 171/376 (45%), Positives = 242/376 (64%), Gaps = 12/376 (3%)
Query: 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
+ +AA+ G+PL IEE++VE P+ E+ ++I+ T +CH+D F S D P+ PVI
Sbjct: 1 KSRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDA-FTLSGAD-PEGVFPVI 58
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRP 130
GHE G+VE+VGE V VK D V+P++ +CGEC+ C S K+N C G+G P
Sbjct: 59 LGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP 118
Query: 131 NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
DGTSRF G I+H++ S+F+EY+VV + KI P PL CLL CGV+TG
Sbjct: 119 ----DGTSRF-SKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTG 173
Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
+GA A VE G TVA+FGLG +GL+V +GAR+ +AS+II +DINP KFE+ KK G TD
Sbjct: 174 IGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATD 233
Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
+NP DK + +VI E+TDGG DY FECIG +VM A +GWG+++I+GV G
Sbjct: 234 CVNPND-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG 292
Query: 311 SPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKA 370
IS +++ GR G+ FGG+K R+++ + ++Y+ E+ L +F+TH + DIN+A
Sbjct: 293 QEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEA 352
Query: 371 FDLLLEGKSLRCIIWM 386
FDL+ EGKS+R +I
Sbjct: 353 FDLMHEGKSIRTVIHY 368
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368 |
| >gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 349 bits (897), Expect = e-119
Identities = 146/370 (39%), Positives = 202/370 (54%), Gaps = 11/370 (2%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
+AA+ GKPL IEE+E++ P E+ ++I LCHSD+ DLP PLP + G
Sbjct: 2 RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTG--DLP-APLPAVLG 58
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
HE GVVE VG V VK D V+ + CG CR C + N C G G DG
Sbjct: 59 HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDL-GAGILGGQLPDG 117
Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
T RF G+ + + +F EY+VV VVKI IPL A LL CGV+TGVGA
Sbjct: 118 TRRFT-ADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVN 176
Query: 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256
A V G TVA+ G G VGL +GAR+ AS+II VD PEK E+ ++FG T +N
Sbjct: 177 TARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNA-- 234
Query: 257 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
+ + ++++TDG GADY FE +G + + A +R+G G V++G+ G +SL
Sbjct: 235 -SEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSL 292
Query: 316 NSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLL 374
++E+ L + + G+ +G PR DI L Y L L E +T S +IN+AF +
Sbjct: 293 PALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADM 352
Query: 375 LEGKSLRCII 384
L G++ R +I
Sbjct: 353 LAGENARGVI 362
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363 |
| >gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Score = 262 bits (672), Expect = 5e-85
Identities = 136/363 (37%), Positives = 199/363 (54%), Gaps = 15/363 (4%)
Query: 26 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85
+PLVIEE+E++PP E+ +KI LCHSD++ D P+ PLP+ GHEA GVV
Sbjct: 19 RPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVING--DRPR-PLPMALGHEAAGVVVE 75
Query: 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD---GTSRFRE 142
VGE V +++ D V+ +F CG CR C + C G N G R R
Sbjct: 76 VGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALC---EPGAAANGAGTLLSGGRRLRL 132
Query: 143 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 202
G++ HH L +S+F EY+VV VVKI +PL IA L C V TGVGA AGV
Sbjct: 133 RGGEINHH-LGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRP 191
Query: 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 262
G +VA+ GLG VGL+ GA AS+++ VD+N +K + ++ G T +N GD
Sbjct: 192 GQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNA---GDPNA 248
Query: 263 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL- 321
+ ++E+T GG DY FE G + A+ +R G G TV G+ + +S+ ++ ++
Sbjct: 249 VEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVA 307
Query: 322 KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLR 381
+ R++ G+Y G PR DI YL L + + +TH + +IN+ FD L G+++R
Sbjct: 308 EERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVR 367
Query: 382 CII 384
+I
Sbjct: 368 QVI 370
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371 |
| >gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 261 bits (670), Expect = 1e-84
Identities = 125/371 (33%), Positives = 190/371 (51%), Gaps = 19/371 (5%)
Query: 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
++ AA+ R PG P V+E++E++ P+ E+ ++I+ T +CH+D+ LP PLP
Sbjct: 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVV--RDGGLP-TPLPA 57
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYR 129
+ GHE GVVE+VG V +K D V+ F CGEC +C S C F G R
Sbjct: 58 VLGHEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRR 116
Query: 130 PNMPRDGTSRFRELKGDVIH-HFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVS 188
P DG++ G +H HF SSF Y+VV +VVK+ +PL + L CG+
Sbjct: 117 P----DGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQ 172
Query: 189 TGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
TG GA V GS++A+FG GAVGLA A++ + II VDI + E+ K+ G
Sbjct: 173 TGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA 232
Query: 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
T INP + I+E+T GG DY + G+ +V+ A ++ G ++G
Sbjct: 233 THVINPKEED---LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPP 288
Query: 309 HGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI 367
G+ ++L+ ++L G+++ G G P+ I L + Y + + +T F DI
Sbjct: 289 PGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTF-YPFEDI 347
Query: 368 NKAFDLLLEGK 378
N+A GK
Sbjct: 348 NQAIADSESGK 358
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365 |
| >gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family | Back alignment and domain information |
|---|
Score = 249 bits (638), Expect = 6e-80
Identities = 140/374 (37%), Positives = 201/374 (53%), Gaps = 15/374 (4%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIF 75
KAA+ PG+P +EEIE++ PKA E+ +K++ + LCHSD T DLP P++
Sbjct: 3 KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSD---EHLVTGDLPMPRYPILG 59
Query: 76 GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
GHE GVV VG V VK D V+ F CG CR C + N C + D
Sbjct: 60 GHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISD 119
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
GT RF DV L + +F+EY+VV VVKI IPL ACL+ CGV TG G+A
Sbjct: 120 GTYRFHADGQDVGQMCL-LGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAV 178
Query: 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255
+A V G TV + G+G VG+ +GA + A K+I VD K E KFG T A
Sbjct: 179 NIADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF--A 236
Query: 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLT--SVMNDAFNSSREGWGKTVILGV-EMHGS 311
+ + Q+++E+T+G GAD +G + +A +++R+G G+ V+ G+ M
Sbjct: 237 SMEEAV--QLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADV 293
Query: 312 PISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKA 370
+ +N E+ L + + GT FGG PR+DI L + Y +L L E IT + IN+
Sbjct: 294 DVKVNLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLDQINEG 353
Query: 371 FDLLLEGKSLRCII 384
+ +L+GK++R +I
Sbjct: 354 YQDMLDGKNIRGVI 367
|
This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 206 bits (525), Expect = 4e-63
Identities = 121/376 (32%), Positives = 179/376 (47%), Gaps = 19/376 (5%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KAA+ + P PL IEEI V PK EI I++ +CHSD+ K +LP P P + G
Sbjct: 2 KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKG--ELP-FPPPFVLG 58
Query: 77 HEAVGVVESVGEYVE---EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNM 132
HE G V VG VE + D V+ F CG+CR C K N C F R
Sbjct: 59 HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGT 118
Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVG 192
DGT+R L G ++ + EY+VV T + + + + +L C T G
Sbjct: 119 LYDGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYG 177
Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
A A V G TVA+ G+G VG + + A+ AS II VD+ EK K+ G T +
Sbjct: 178 ALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV 237
Query: 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS 311
N A + I+E+T G G D E +G A + R+G G+ V++G+ G+
Sbjct: 238 NAA---KEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGA 293
Query: 312 --PISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
I + + + +G + G+Y G +PR D+ L +L+ +TH+ +IN+
Sbjct: 294 TAEIPITRL-VRRGIKIIGSY--GARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINE 350
Query: 370 AFDLLLEGK-SLRCII 384
A++ L +G R I+
Sbjct: 351 AYENLRKGLIHGRAIV 366
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase | Back alignment and domain information |
|---|
Score = 193 bits (491), Expect = 3e-58
Identities = 120/371 (32%), Positives = 178/371 (47%), Gaps = 20/371 (5%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIF 75
+ I R G P+ +E I V P E+ + I +CH+D+ + + D P +
Sbjct: 3 RGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND----EFPFLL 58
Query: 76 GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
GHEA GVVE+VGE V +V D V+ + CG+CR CK + C + D
Sbjct: 59 GHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTD 118
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
GT EL L I +F E ++V K+ P A LL CGV G+GAA
Sbjct: 119 GT----ELSPA-----LGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAV 169
Query: 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255
GV+ G +VA+ G G VG A GA L ASKII VDI+ K E ++FG T +N +
Sbjct: 170 NTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN-S 228
Query: 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 314
+ D + I+ +T G GAD + +G AF +R+ G V++GV +
Sbjct: 229 SGTD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTPDMTLE 285
Query: 315 LNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDL 373
L +++ +G ++ +++G P D L YL L L F+T + D+ +AFD
Sbjct: 286 LPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDK 345
Query: 374 LLEGKSLRCII 384
+ G LR ++
Sbjct: 346 MHAGDVLRSVV 356
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 2e-53
Identities = 117/383 (30%), Positives = 171/383 (44%), Gaps = 59/383 (15%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KAA+ + G+PL IEE+ V P E+ IK+ +CH+D+ K D P LP+I G
Sbjct: 5 KAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKG--DWPVPKLPLIPG 62
Query: 77 HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPR 134
HE VG V VGE V +K D V + CGEC C+S N C ++ GY
Sbjct: 63 HEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYT----T 118
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
DG + EY VV +VVKI + L A L C T A
Sbjct: 119 DG-------------------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL 159
Query: 195 WKVAGVEVGSTVAIFGLGAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
K A V+ G VA+ G G +G A A GA +I + + EK E+ KK G
Sbjct: 160 -KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGAE------VIAITRSEEKLELAKKLGAD 212
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
IN + D + +KE+ AD + +G + + + + R G G V++G+
Sbjct: 213 HVINSS---DSDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGG 263
Query: 310 GSPISLN-SIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHD 366
G L + ILK S+ G+ G R+D+ ++ LD E + I + +
Sbjct: 264 GPIPLLPAFLLILKEISIVGSLVGT---RADL----EEALDFAAEGKIKPEILETIPLDE 316
Query: 367 INKAFDLLLEGKSL-RCIIWMDK 388
IN+A++ + +GK R +I M
Sbjct: 317 INEAYERMEKGKVRGRAVIDMSS 339
|
Length = 339 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 170 bits (434), Expect = 9e-51
Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 32/294 (10%)
Query: 42 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 101
E+ +++ LC +D+ + P LP+I GHE GVV VG V VK D V+
Sbjct: 1 EVLVRVEAAGLCGTDLHIRRG-GYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVV 59
Query: 102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161
+ + CG C C+ G DG F EY
Sbjct: 60 LPNLGCGTCELCR-----ELCPGGGILGEG--LDGG-------------------FAEYV 93
Query: 162 VVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEG 221
VV ++V + + L A LL ++T A + ++ G TV + G G VGL A+
Sbjct: 94 VVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQL 153
Query: 222 ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281
A+ +++I D + EK E+ K+ G I+ + + ++ GGAD + +
Sbjct: 154 AKA-AGARVIVTDRSDEKLELAKELGADHVIDYKEEDLE---EELRLTGGGGADVVIDAV 209
Query: 282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335
G + A R G G+ V++G G P+ + K ++ G+ G +
Sbjct: 210 GGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTRE 262
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 3e-50
Identities = 96/367 (26%), Positives = 154/367 (41%), Gaps = 31/367 (8%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KAA+ + G + +EE P ++ I++ T +C SD+ ++ +I G
Sbjct: 2 KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPG-DIILG 60
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
HE VG V VG V K D V+ + CG CR C++ + N C N G
Sbjct: 61 HEFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLC--------ENPGFYG 111
Query: 137 TS-RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP-HIPLGIACLLSCGVSTGVGAA 194
+ + G F EY V + P I A L+ ++T
Sbjct: 112 YAGLGGGIDG----------GFAEYVRVPADFNLAKLPDGIDEEAA-ALTEPLATAYHGH 160
Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
+ A V G TV + G G +GL A+L AS +I VD +PE+ E+ K+ G D +
Sbjct: 161 AERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVN 220
Query: 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
+ D I E+T G GAD E +G ++ A + R G G V++GV G I
Sbjct: 221 PSEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGV-YGGEDI 276
Query: 314 SLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 372
L + ++ K ++ G+ + D +++ + ITH + D +A++
Sbjct: 277 PLPAGLVVSKELTLRGSLRPSGRE--DFERALDLLASGKIDPEKLITHRLPLDDAAEAYE 334
Query: 373 LLLEGKS 379
L + K
Sbjct: 335 LFADRKE 341
|
Length = 350 |
| >gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 2e-49
Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 32/380 (8%)
Query: 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
+AA+ PGKPL I E+ + + + +++ +C SDV P++PLP+I
Sbjct: 1 ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAG--RRPRVPLPIIL 58
Query: 76 GHEAVGVVESVGEYV------EEVKERDLVLPIFHRDCGECRDCKSSKSNTC-SKFGRGY 128
GHE VG V ++G V E +K D V CG C C C ++ G+
Sbjct: 59 GHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGH 118
Query: 129 RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIPLGIACLLSCGV 187
+ S + E+ + T +V++ ++P +A +C +
Sbjct: 119 EASCDDPHLS----------------GGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCAL 162
Query: 188 STGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
+T V AA AG V G TV + G G +GL A+L A ++I +D +PE+ E+ ++F
Sbjct: 163 AT-VLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREF 221
Query: 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
G I+ D +++++T G GAD E G + + + R G G V++G
Sbjct: 222 GADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVG 280
Query: 306 VEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 364
+ L+ I K ++ G + ++ D+ E +TH
Sbjct: 281 SVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFP-FAELVTHRYPL 339
Query: 365 HDINKAFDLLLEGKSLRCII 384
DIN+A +L G +L+ +I
Sbjct: 340 EDINEALELAESGTALKVVI 359
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361 |
| >gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Score = 168 bits (429), Expect = 3e-49
Identities = 105/381 (27%), Positives = 162/381 (42%), Gaps = 53/381 (13%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KAA+ P + +EE+ V P E+ +K+ +C +DV + K P I G
Sbjct: 2 KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPR--ILG 58
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC---SKFGRGYRPNMP 133
HE G + VG+ V K D V H CGEC C N C KFG Y
Sbjct: 59 HEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLY----- 113
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK-ITPHIPLGI----ACL---LSC 185
DG F EY V V + +P + A L L+C
Sbjct: 114 -DG-------------------GFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLAC 153
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
+ A + AG++ G TV + G G +GL A A+ + A K+I D+N + E KK
Sbjct: 154 CI-----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK 208
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
G I+ A ++ + + ++E+TDG GAD G A R+G G+ +
Sbjct: 209 LGADYTIDAA---EEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFF 264
Query: 305 GVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVS 363
G GS ++++ I + ++ G+Y D + ++++ + ITH
Sbjct: 265 GGLPKGSTVNIDPNLIHYREITITGSYAAS---PEDYKEALELIASGKIDVKDLITHRFP 321
Query: 364 FHDINKAFDLLLEGKSLRCII 384
DI +AF+L +GKSL+ +I
Sbjct: 322 LEDIEEAFELAADGKSLKIVI 342
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 3e-46
Identities = 95/377 (25%), Positives = 162/377 (42%), Gaps = 50/377 (13%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KA + PG L E+I P E+ +K+ +C SD+ + + P++ G
Sbjct: 2 KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG---AYHPPLVLG 57
Query: 77 HEAVGVVESVGEYVEEVKERDLV--LPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPN 131
HE G VE VG V+++ D V P+ CG+C CK + + CS G
Sbjct: 58 HEFSGTVEEVGSGVDDLAVGDRVAVNPLLP--CGKCEYCKKGEYSLCSNYDYIG------ 109
Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGV 191
RDG +F EY V +++KI H+ A ++ + +
Sbjct: 110 SRRDG-------------------AFAEYVSVPARNLIKIPDHVDYEEAAMIE-PAAVAL 149
Query: 192 GAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251
A AG+ +G TV + G G +GL + ++ A ++I VDI+ EK + ++ G D
Sbjct: 150 HAVRL-AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDT 208
Query: 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV---E 307
INP + ++E+T+G GAD E G + + A +R G GK V++G+ +
Sbjct: 209 INPKEEDVEK----VRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGD 263
Query: 308 MHGSPISLNSIEILKGRSVCGT--YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH 365
+ S + I + K ++ G+ + P + T ++ + ITH +
Sbjct: 264 VTLSEEAFEKI-LRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLE 322
Query: 366 DINKAFDLLLEGKSLRC 382
D AF+ L + +
Sbjct: 323 DGPAAFERLADREEFSG 339
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 1e-45
Identities = 119/377 (31%), Positives = 167/377 (44%), Gaps = 43/377 (11%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIR---IKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
KA + PGK I EV PK +++ TS+C SD+ ++ P +
Sbjct: 2 KALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGV--PGAKHGM 56
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
I GHE VG V VG V+ +K D V CG CR C+ C G++
Sbjct: 57 ILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR 116
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVV---DITHVVKITPHIPLGIACLLSCGVSTG 190
DG EY V D ++ KI +P A +LS + TG
Sbjct: 117 IDGG-------------------QAEYVRVPYAD-MNLAKIPDGLPDEDALMLSDILPTG 156
Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
A ++AG++ GSTVA+ G G VGL GARL A++II VD NPE+ ++ K+ G TD
Sbjct: 157 FHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATD 215
Query: 251 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
INP V Q I E+T G G D E +G A R G G +GV +
Sbjct: 216 IINPK--NGDIVEQ-ILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGV--Y 269
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKP-RSDIATLAQKYLDKELNLGEFITHEVSFHDIN 368
G P L + G+++ T+ GL P R+ + L + +++ + ITH DI
Sbjct: 270 GKPDPLPLLGEWFGKNL--TFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDIL 327
Query: 369 KAFDLLLEGKSLRCIIW 385
KA+ L + K CI
Sbjct: 328 KAYR-LFDNKPDGCIKV 343
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 5e-45
Identities = 91/359 (25%), Positives = 140/359 (38%), Gaps = 45/359 (12%)
Query: 25 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 84
LV+EE+ V P E+ +K+ +CHSD+ LP+ GHE G V
Sbjct: 11 KGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHIL-DGGVPTLTKLPLTLGHEIAGTVV 69
Query: 85 SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 144
VG V K D V CG C C+ + N C P + DG
Sbjct: 70 EVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCL---NQGMPGLGIDGG------- 119
Query: 145 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 204
F EY VV +V + +P A + + V T A + V+ G
Sbjct: 120 ------------FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGE 167
Query: 205 TVAIFGLGAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259
TV + GLG +GL A A GA +I VDI EK E+ K+ G + +N D
Sbjct: 168 TVLVIGLGGLGLNAVQIAKAMGA------AVIAVDIKEEKLELAKELGADEVLNSL---D 218
Query: 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 319
+ GG D F+ +G DA + + G G+ V++G+ + L+ +
Sbjct: 219 DSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLSDL- 276
Query: 320 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 378
I + + G++ GG D+ + +L+ +I + + L +GK
Sbjct: 277 IARELRIIGSF-GGT--PEDLPEVLDLIAKGKLDP---QVETRPLDEIPEVLERLHKGK 329
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 155 bits (395), Expect = 4e-44
Identities = 98/376 (26%), Positives = 169/376 (44%), Gaps = 52/376 (13%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KA + PG+ L +EE+ V P E+ IK+ +C +D+ ++ P++ G
Sbjct: 2 KALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEG---EFGAAPPLVPG 57
Query: 77 HEAVGVVESVGEYVEEVKERDLVL--P-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
HE GVV +VG V K D V P I+ CGEC C+ + N C
Sbjct: 58 HEFAGVVVAVGSKVTGFKVGDRVAVDPNIY---CGECFYCRRGRPNLCENLT-AVGVT-- 111
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTG 190
R+G F EY VV V KI ++ A L LSC V
Sbjct: 112 RNG-------------------GFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH-- 150
Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
+ G++ G +V +FG G +GL +A+ +LN AS++ + N EK E+ KK G T+
Sbjct: 151 ---GLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATE 207
Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
++P + + KE G D E G+ + A +R G G ++ GV
Sbjct: 208 TVDP----SREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPD 262
Query: 311 SPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLD-KELNLGEFITHEVSFHDIN 368
+ +S++ EI K ++ G++ + P + +A L+ ++++ ++H + ++
Sbjct: 263 ARVSISPFEIFQKELTIIGSF---INPYTFPRAIA--LLESGKIDVKGLVSHRLPLEEVP 317
Query: 369 KAFDLLLEGKSLRCII 384
+A + + G +L+ ++
Sbjct: 318 EALEGMRSGGALKVVV 333
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 7e-44
Identities = 116/366 (31%), Positives = 164/366 (44%), Gaps = 43/366 (11%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KAAI P KPL IEE+ P E+ IK+ +C+ D+ FWK P+ P+I G
Sbjct: 2 KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGF--FPRGKYPLILG 59
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
HE VG VE VGE VE K D V+ ++ CG+C C S + N C
Sbjct: 60 HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLC--------------- 104
Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
R R G+ + F EY V +VK+ ++ A L +C V T V A K
Sbjct: 105 --RNRAEYGEEVDGG-----FAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-K 156
Query: 197 VAGVEVGSTVAI-FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255
AGV+ G TV + G VG+ + A+ +++I V +PEK +I K+ G I+
Sbjct: 157 RAGVKKGDTVLVTGAGGGVGIHAIQLAKA-LGARVIAVTRSPEKLKILKELGADYVID-- 213
Query: 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
G K V K GGAD E +G + + ++ S +G G+ V++G + P L
Sbjct: 214 --GSKFSEDVKKL---GGADVVIELVG-SPTIEESLRSLNKG-GRLVLIG-NVTPDPAPL 265
Query: 316 NSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLL 374
ILK + G+ L L KE + I VS DIN+A + L
Sbjct: 266 RPGLLILKEIRIIGS--ISATKADVEEALK---LVKEGKIKPVIDRVVSLEDINEALEDL 320
Query: 375 LEGKSL 380
GK +
Sbjct: 321 KSGKVV 326
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 1e-42
Identities = 105/372 (28%), Positives = 160/372 (43%), Gaps = 54/372 (14%)
Query: 17 KAAICRIPGKPLVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
KA +C KP +E +++ P A E+ +++ +C SD+ + P P I
Sbjct: 2 KALVCE---KPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRN--PFASYPRI 56
Query: 75 FGHEAVGVVESVGEYVEEVKERDLV--LPIFHRDCGECRDCKSSKSNTCSK---FGRGYR 129
GHE G V VGE V +K D V P CGEC C+ + N C G
Sbjct: 57 LGHELSGEVVEVGEGVAGLKVGDRVVVDPYIS--CGECYACRKGRPNCCENLQVLG---- 110
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
+ RDG F EY VV ++ + + L A L+ ++
Sbjct: 111 --VHRDGG-------------------FAEYIVVPADALL-VPEGLSLDQAALVEP-LAI 147
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
G A + AGV G TV + G G +GL V + A+ R +++I VDI+ E+ E ++ G
Sbjct: 148 GAHAVRR-AGVTAGDTVLVVGAGPIGLGVIQVAKA-RGARVIVVDIDDERLEFARELGAD 205
Query: 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
D IN GD+ V+ ++E+TDG GAD + G + M +A G G+ V++G+
Sbjct: 206 DTINV---GDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGL-- 259
Query: 309 HGSPISLNSIEILKGRSVCGTYFGG-LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI 367
P++ E K T G R D + +++ ITH F D+
Sbjct: 260 SKGPVTFPDPEFHKKEL---TILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDV 316
Query: 368 NKAFDLLLEGKS 379
+AFDL
Sbjct: 317 PEAFDLWEAPPG 328
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Score = 151 bits (385), Expect = 1e-42
Identities = 99/373 (26%), Positives = 151/373 (40%), Gaps = 66/373 (17%)
Query: 30 IEEIEVEPPKAWEIRIKILCTSLCHSDV-------TFW--KSSTDLPKLPLPVIFGHEAV 80
+EE+ P K E++IK+ +C SD+ F + L PV GHE
Sbjct: 14 VEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFS 73
Query: 81 GVVESVGEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTS 138
GVV VG V K D V+ P CG C CK N C G
Sbjct: 74 GVVVEVGSGVTGFKVGDRVVVEPTIK--CGTCGACKRGLYNLCDSLG------------- 118
Query: 139 RFRELKGDVIHHFLNISS----FTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGV 191
F+ + F EY VV HV K+ ++PL A L L+
Sbjct: 119 ------------FIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWH--- 163
Query: 192 GAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251
A + +G + G T + G G +GL + ASKII + + + E+ ++ G T
Sbjct: 164 --AVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIV 221
Query: 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
++P V ++++T G G D F+C G+ + ++ A ++ R G V + +
Sbjct: 222 LDPTEVD---VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAI--WE 275
Query: 311 SPISLNSIEI-LKGRSVCGT--YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI 367
PIS N ++ LK +++ G+ Y I LA +D E IT + DI
Sbjct: 276 KPISFNPNDLVLKEKTLTGSICYTREDFEEV-IDLLASGKIDAE----PLITSRIPLEDI 330
Query: 368 -NKAFDLLLEGKS 379
K F+ L+ K
Sbjct: 331 VEKGFEELINDKE 343
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 3e-40
Identities = 92/365 (25%), Positives = 152/365 (41%), Gaps = 47/365 (12%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
+AA+ G+PL I E+ P + +++ +C SD W+ LP + G
Sbjct: 2 RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPH--VPG 59
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
HE GVV VGE V + D V F CG C C++ SN C +P G
Sbjct: 60 HEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCE---HQVQPGFTHPG 116
Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVD--ITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
SF EY V ++V++ + A L C +T A
Sbjct: 117 -------------------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL 157
Query: 195 WKVAGVEVGSTVAIFGLGAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
A V+ G VA+ G G VGL A A GAR +I VDI+ +K E+ ++ G
Sbjct: 158 VHQARVKPGEWVAVHGCGGVGLSAVMIASALGAR------VIAVDIDDDKLELARELGAV 211
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV--- 306
+N + + V+ ++++T GGA + +G+ ++ S R+ G+ V +G+
Sbjct: 212 ATVNAS--EVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLG 268
Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHD 366
E G + ++ + + + + G++ G+ A LA K L+ + +S +
Sbjct: 269 EEAGVALPMDRV-VARELEIVGSH--GMPAHRYDAMLALIASGK-LDPEPLVGRTISLDE 324
Query: 367 INKAF 371
A
Sbjct: 325 APDAL 329
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 2e-39
Identities = 108/392 (27%), Positives = 160/392 (40%), Gaps = 91/392 (23%)
Query: 26 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVE 84
L +EE + P E+ +++ +C SDV ++K + P++ GHE+ G V
Sbjct: 8 GDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVV 67
Query: 85 SVGEYVEEVKERDLV-----LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM------P 133
+VG V +K D V +P C C CKS + N C P+M P
Sbjct: 68 AVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLC--------PDMRFAATPP 114
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI-----ACL--LSCG 186
DGT Y + H +P + A + LS G
Sbjct: 115 VDGT-------------------LCRY----VNHPADFCHKLPDNVSLEEGALVEPLSVG 151
Query: 187 VSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
V A + AGV G TV +FG G +GL A A+ A+K++ DI+P + E K+
Sbjct: 152 V-----HACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKEL 206
Query: 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
G T +N T ++ I E+ G G D EC G S + A ++R G G V++G
Sbjct: 207 GATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVG 265
Query: 306 VEMHGSP--------ISLNSIEILKGRSV---CGTYFGGLKPRSDIATLAQKYLDKELNL 354
+ G P SL I+I R V TY P + I LA +D +
Sbjct: 266 M---GKPEVTLPLSAASLREIDI---RGVFRYANTY-----PTA-IELLASGKVD----V 309
Query: 355 GEFITHEVSFHDINKAFDLLLEGK--SLRCII 384
ITH D +AF+ +GK ++ +I
Sbjct: 310 KPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 2e-39
Identities = 91/333 (27%), Positives = 138/333 (41%), Gaps = 57/333 (17%)
Query: 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPV 73
KAA+ G KP ++++ V P E+ +K+ + +CH+D+ D P K LP+
Sbjct: 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALG--DWPVKPKLPL 58
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 132
I GHE GVV +VG V +K D V + + CG+C C++ C + N
Sbjct: 59 IGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN-----QKNS 113
Query: 133 PR--DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
DGT F EY++ D +V I + A L C T
Sbjct: 114 GYTVDGT-------------------FAEYAIADARYVTPIPDGLSFEQAAPLLCAGVT- 153
Query: 191 VGAAWKVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
V A K AG++ G V I G G V A A G R +I +D+ EK E+ K
Sbjct: 154 VYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLR------VIAIDVGDEKLELAK 207
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI 303
+ G F++ + +KE+T G GA + A + R G G V
Sbjct: 208 ELGADAFVDFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVC 263
Query: 304 LGV----EMHGSPISLNSIEILKGRSVCGTYFG 332
+G+ + P L +L+G ++ G+ G
Sbjct: 264 VGLPPGGFIPLDPFDL----VLRGITIVGSLVG 292
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 3e-39
Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 37/360 (10%)
Query: 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
+ + E V P E+ +++ + LC SD+ ++ P VI GHE GVV +VG
Sbjct: 12 VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQ-GVIPGHEPAGVVVAVG 70
Query: 88 EYVEEVKERDLVLPIFHRD-CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGD 146
V + D V+ +H CG CR+C+ C+ Y N RDG
Sbjct: 71 PGVTHFRVGDRVMV-YHYVGCGACRNCRRGWMQLCTSKRAAYGWN--RDG---------- 117
Query: 147 VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTV 206
EY +V ++ + + LL CG+ T A + GV TV
Sbjct: 118 ---------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA-YHALRRVGVSGRDTV 167
Query: 207 AIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266
+ G G VGL AR A +IGVD +PE+ E+ K G IN + + ++
Sbjct: 168 LVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELT 227
Query: 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE--ILKGR 324
GAD EC G T+ A + R WG+ V++G G +++ I K R
Sbjct: 228 S---GAGADVAIECSGNTAARRLALEAVRP-WGRLVLVG---EGGELTIEVSNDLIRKQR 280
Query: 325 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384
++ G+++ + + A +L + +TH +A+ L +G+S + +
Sbjct: 281 TLIGSWYFSVPDMEECAEFL---ARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVF 337
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 136 bits (346), Expect = 4e-37
Identities = 107/367 (29%), Positives = 149/367 (40%), Gaps = 52/367 (14%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-----TFWKSSTDLPKLPLPVIFGHE 78
G + E+ V P E+ IK+L S+C +DV W S P P+IFGHE
Sbjct: 9 AGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP----PLIFGHE 64
Query: 79 AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRD 135
G V VGE V VK D V H CG+C C++ + C G + D
Sbjct: 65 FAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG------VDTD 118
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVG 192
G F EY VV ++ K IP IA + L V T +
Sbjct: 119 GC-------------------FAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL- 158
Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
AG G +V I G G +GL A+ AS +I D NP + E+ KK G I
Sbjct: 159 -----AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVI 213
Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
NP ++ V +V G D E G + + G G+ ILG+
Sbjct: 214 NP---REEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVD 269
Query: 313 ISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 372
I LN++ I KG +V G G K ++ +++L ITH++ D +AF+
Sbjct: 270 IDLNNLVIFKGLTVQGIT--GRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFE 327
Query: 373 LLLEGKS 379
L+ GK
Sbjct: 328 LMRSGKC 334
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341 |
| >gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 2e-36
Identities = 97/368 (26%), Positives = 149/368 (40%), Gaps = 48/368 (13%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL----------PKLPLPV 73
PGKPL EI+ P E+ +K+ +CHSD+ W DL + LP+
Sbjct: 9 PGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPL 68
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
+ GHE VG V +VG +VK D VL CGEC C + N C+K
Sbjct: 69 VLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAK---------- 118
Query: 134 RDGTSRFRELKGDVIHHFLNISS---FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
L I + EY +V + + + +A L+C T
Sbjct: 119 ---------------GRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTA 163
Query: 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
A K+ + V I G G +GL + + II VDI+ K E K G
Sbjct: 164 YSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADV 223
Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
+N + D ++ I + GG D + + ++ + AF+ +G GK V++G+
Sbjct: 224 VVNGS---DPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGE 279
Query: 311 SPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKA 370
+ + L + L+ ++ G+Y G L+ ++ LA K L E D+N A
Sbjct: 280 ATLPLPLL-PLRALTIQGSYVGSLEELRELVALA-----KAGKLKPIPLTERPLSDVNDA 333
Query: 371 FDLLLEGK 378
D L GK
Sbjct: 334 LDDLKAGK 341
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350 |
| >gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 4e-35
Identities = 100/373 (26%), Positives = 154/373 (41%), Gaps = 53/373 (14%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTF-----WKSSTDLPKLPLPVIFGHE 78
PG + E+ V P E+ IK+L TS+C +DV W S + P + GHE
Sbjct: 7 PGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSR----IKPPQVVGHE 62
Query: 79 AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRD 135
G V +G VE +K D V H CG+C C+ + + C FG + D
Sbjct: 63 VAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG------VDTD 116
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVG 192
G F EY+VV ++ K IP A + L V T +
Sbjct: 117 GC-------------------FAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL- 156
Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
AG G +V + G G +GL A+ + A +I D N + E+ KK G T +
Sbjct: 157 -----AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVV 211
Query: 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS 311
NP + V + + ++TDG G D E G + + G G+ +LG+
Sbjct: 212 NPF---KEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKV 267
Query: 312 PISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAF 371
I + I KG ++ G G T+++ +L+L ITH+ F K F
Sbjct: 268 TIDFTNKVIFKGLTIYGIT--GRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGF 325
Query: 372 DLLLEGKSLRCII 384
+L+ G++ + I+
Sbjct: 326 ELMRSGQTGKVIL 338
|
This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340 |
| >gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 9e-35
Identities = 95/367 (25%), Positives = 145/367 (39%), Gaps = 40/367 (10%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-TFWKSSTDLPKLPLPVIF 75
KA GK IE+ + + ++ + C SDV T W P +I
Sbjct: 2 KAFAMLGIGKVGWIEK-PIPVCGPNDAIVRPTAVAPCTSDVHTVW---GGAPGERHGMIL 57
Query: 76 GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
GHEAVGVVE VG V++ K D V+ + + G++ + +D
Sbjct: 58 GHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD 117
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVD--ITHVVKITPHIPLGIACLLSCGVSTGVGA 193
G F EY V+ ++ + + A +L +STG
Sbjct: 118 GV-------------------FAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG 158
Query: 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
A ++A +++G TVA+FG+G VGL GARL A +II V P + E+ K++G TD ++
Sbjct: 159 A-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVD 217
Query: 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
V Q I ++T G G D G A + G G +
Sbjct: 218 YKNGD--VVEQ-ILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDY 273
Query: 313 ISLNSIEILKGRSVCGTYF--GGLKP--RSDIATLAQKYLDKELNLGEFITH-EVSFHDI 367
+ + E G G GGL P R + LA ++ + +TH F DI
Sbjct: 274 LPIPREEWGVG---MGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDI 330
Query: 368 NKAFDLL 374
+A L+
Sbjct: 331 EEALMLM 337
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 5e-34
Identities = 95/368 (25%), Positives = 148/368 (40%), Gaps = 51/368 (13%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KAA+ G PL EE+ V P E+ IKI +CH+D+ + D P++ G
Sbjct: 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEG--DWGGSKYPLVPG 58
Query: 77 HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPR 134
HE VG V VG VE K D V + CG C C+ N C K GY
Sbjct: 59 HEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYT----T 114
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL-GIACLLSCGVSTGVGA 193
G + EY V D + V + +PL A LL G++ V +
Sbjct: 115 QG-------------------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGIT--VYS 153
Query: 194 AWKVAGVEVGSTVAIFGLGAVG-LAVAEGARLNRA--SKIIGVDINPEKFEIGKKFGITD 250
A + AG G VA+ G+G +G LAV + RA + + + +P+K E+ +K G +
Sbjct: 154 ALRDAGPRPGERVAVLGIGGLGHLAV----QYARAMGFETVAITRSPDKRELARKLGADE 209
Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
++ D ++ GGAD + + A R G G+ V++G+
Sbjct: 210 VVDSGAELD-------EQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP 261
Query: 311 SPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKA 370
I+K +S+ G+ GG + A + K + N+A
Sbjct: 262 PFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKP------MIETFPLDQANEA 315
Query: 371 FDLLLEGK 378
++ + +G
Sbjct: 316 YERMEKGD 323
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 3e-32
Identities = 101/374 (27%), Positives = 157/374 (41%), Gaps = 56/374 (14%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS--STDLPKLPLPVI 74
KAA GKPL +E++ V P ++ +++ +CHSD+ LP LP
Sbjct: 2 KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPY-KLPFT 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVL---PIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
GHE G VE VG V+ +KE D V+ P CG CR C+ + N C P
Sbjct: 61 LGHENAGWVEEVGSGVDGLKEGDPVVVHPPWG---CGTCRYCRRGEENYCE---NARFPG 114
Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGV 191
+ DG F EY +V +VK+ + A L+ T
Sbjct: 115 IGTDG-------------------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAY 155
Query: 192 GAAWKVAGV-EVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
A K + GSTV + G+G +G +AV + R + +I VD + E ++ ++ G
Sbjct: 156 HAVKKALPYLDPGSTVVVIGVGGLGHIAV-QILRALTPATVIAVDRSEEALKLAERLGAD 214
Query: 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
+N V + ++E+T G GAD + +G + A +G G+ VI+G
Sbjct: 215 HVLN----ASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGG 269
Query: 309 HGS-PISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH-- 365
HG P S + SV G+ +G ++ LA+ + E++
Sbjct: 270 HGRLPTSDL---VPTEISVIGSLWGTRAELVEVVALAESGK---------VKVEITKFPL 317
Query: 366 -DINKAFDLLLEGK 378
D N+A D L EG+
Sbjct: 318 EDANEALDRLREGR 331
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340 |
| >gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 5e-32
Identities = 98/368 (26%), Positives = 152/368 (41%), Gaps = 55/368 (14%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTF-----WKSSTDLPKLPLPVIFGHE 78
L + ++ V P ++ IK+ T++C +DV W T +P+P++ GHE
Sbjct: 9 AEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKT----IPVPMVVGHE 64
Query: 79 AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRDGT 137
VG V VG V K D V H CG CR+C++ + + C G G R G
Sbjct: 65 FVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVN----RPG- 119
Query: 138 SRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAA 194
+F EY V+ +V KI IP +A + V T + +
Sbjct: 120 ------------------AFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTAL--S 159
Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
+ + VG V I G G +G+ A A+ A ++ D+N + E+ +K G T +N
Sbjct: 160 FDL----VGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215
Query: 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
A + + V+ E+ G D E G S ++ G G+ +LG+ I
Sbjct: 216 A---KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAI 271
Query: 314 SLNSIEILKGRSVCGTYFGGLKPRSDIATLAQ--KYLDKELNLGEFITHEVSFHDINKAF 371
N + I KG ++ G Y G R T + L L+L ITH D K F
Sbjct: 272 DWNKV-IFKGLTIKGIY-G----REMFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGF 325
Query: 372 DLLLEGKS 379
+ + G+S
Sbjct: 326 EAMRSGQS 333
|
Length = 341 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-31
Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 55/366 (15%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KA I + IEE+ P E+ IK+ LC+ D+ + P++ PVI G
Sbjct: 2 KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGF--YPRMKYPVILG 59
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
HE VG VE VGE V+ K D V + + G C C+S + C
Sbjct: 60 HEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC--------------- 104
Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
+ R G+ + F F EY+ V +T +VK+ P++ A ++ C +
Sbjct: 105 --KNRLGYGEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL-R 156
Query: 197 VAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
AGV+ G TV + G G A+ +A A GA K+I V + K +I K+ D
Sbjct: 157 RAGVKKGETVLVTGAGGGVGIHAIQVAKALGA------KVIAVTSSESKAKIVSKYA--D 208
Query: 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG-VEMH 309
++ S+ +K++ GGAD E +G T + ++ S G GK + +G V+
Sbjct: 209 YV----IVGSKFSEEVKKI--GGADIVIETVG-TPTLEESLRSLNMG-GKIIQIGNVDPS 260
Query: 310 GS-PISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDIN 368
+ + L I ILK + G + D+ + L E + I EVS +I+
Sbjct: 261 PTYSLRLGYI-ILKDIEIIGHISAT---KRDVEEALK--LVAEGKIKPVIGAEVSLSEID 314
Query: 369 KAFDLL 374
KA + L
Sbjct: 315 KALEEL 320
|
Length = 334 |
| >gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 1e-30
Identities = 101/335 (30%), Positives = 144/335 (42%), Gaps = 43/335 (12%)
Query: 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
+K+L T++C +D+ K D+P + I GHE VGVVE VG V K D VL
Sbjct: 30 VKMLKTTICGTDLHILKG--DVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCI 87
Query: 105 RDCGECRDCKSSKSNTCSKFG--RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSV 162
CG C C+ + C G G DGT EY
Sbjct: 88 SSCGTCGYCRKGLYSHCESGGWILGNLI----DGTQ-------------------AEY-- 122
Query: 163 VDITH----VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
V I H + K+ + A +LS + TG V+ G TVAI G G VGLA
Sbjct: 123 VRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAA 182
Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277
A+L SKII VD++ + E+ KK G T +N A + + E+TDG G D
Sbjct: 183 LLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA---KGDAIEQVLELTDGRGVDVV 239
Query: 278 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPR 337
E +G+ + G G +GV HG P+ L+ +E L +++ T GL
Sbjct: 240 IEAVGIPATFELCQELVAPG-GHIANVGV--HGKPVDLH-LEKLWIKNITITT--GLVDT 293
Query: 338 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 372
+ L + +L+ + +TH +I KA+D
Sbjct: 294 NTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYD 328
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 5e-29
Identities = 101/369 (27%), Positives = 156/369 (42%), Gaps = 67/369 (18%)
Query: 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
+++ T++C SD+ + +P + I GHE +GVVE VG V +K D V+ F
Sbjct: 30 VRVTATAICGSDLHLY--HGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFT 87
Query: 105 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHH---FLNISSFT--- 158
CGEC CK + C D T+ E+ H S T
Sbjct: 88 IACGECFYCKRGLYSQC-------------DNTNPSAEMAKLYGHAGAGIFGYSHLTGGY 134
Query: 159 -----EYSVV---DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG 210
EY V D+ KI + A LS + TG AA ++A V+ G TVA++G
Sbjct: 135 AGGQAEYVRVPFADVGPF-KIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWG 192
Query: 211 LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 270
G VGL A A+L A ++I +D PE+ E+ + + IN V + ++E+T
Sbjct: 193 CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEV--DDVVEALRELT 250
Query: 271 DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEILK--GR-S 325
G G D C + +G+ + + + + L + P +L +I+ ++ G S
Sbjct: 251 GGRGPDVCIDAVGMEAHGSPLHKAEQALLK----LETD---RPDALREAIQAVRKGGTVS 303
Query: 326 VCGTYFG-------------GLKPRSDIATLAQKYLDKELNL---GEF-----ITHEVSF 364
+ G Y G GL R T Q+YL + L L GE ITH +
Sbjct: 304 IIGVYGGTVNKFPIGAAMNKGLTLRMG-QTHVQRYLPRLLELIESGELDPSFIITHRLPL 362
Query: 365 HDINKAFDL 373
D +A+ +
Sbjct: 363 EDAPEAYKI 371
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386 |
| >gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 2e-26
Identities = 96/335 (28%), Positives = 146/335 (43%), Gaps = 42/335 (12%)
Query: 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
I+++ T +C SD+ ++ + + P P+ GHE VGVVE VG V VK D V+ F
Sbjct: 30 IRVVATCVCGSDLWPYRGVSP-TRAPAPI--GHEFVGVVEEVGSEVTSVKPGDFVIAPFA 86
Query: 105 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164
G C C++ + +C G DG + + D
Sbjct: 87 ISDGTCPFCRAGFTTSCVHGGFWGAFV---DGGQ----------------GEYVRVPLAD 127
Query: 165 ITHVVKITPHIPLGIACL------LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
T +VK P P L LS + TG AA AGV GSTV + G GAVGL
Sbjct: 128 GT-LVK-VPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCA 184
Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277
A+ A +II + + ++ + ++FG TD + A G++ V++V +E+T G GAD
Sbjct: 185 VLAAKRLGAERIIAMSRHEDRQALAREFGATDIV--AERGEEAVARV-RELTGGVGADAV 241
Query: 278 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP- 336
EC+G M A +R G G+ +GV G + + L R+V GG P
Sbjct: 242 LECVGTQESMEQAIAIARPG-GRVGYVGVPHGGVELDVRE---LFFRNV--GLAGGPAPV 295
Query: 337 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAF 371
R + L L +N G + ++ + +
Sbjct: 296 RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGY 330
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 5e-26
Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 43/285 (15%)
Query: 30 IEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
+E EV P+ E+ IK+ +C SD+ +K D + P V+ GHE G + VG
Sbjct: 14 VELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETP--VVLGHEFSGTIVEVG 71
Query: 88 EYVEEVKERDLVLPI-FHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPRDGTSRFRELKG 145
VE K D V+ CG C C+ N C + G G + DG
Sbjct: 72 PDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ----ADG--------- 118
Query: 146 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAWKVAGVEV 202
F EY +V + ++ ++ L A L L+ V A + +G+
Sbjct: 119 ----------GFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVH----AVAERSGIRP 164
Query: 203 GSTVAIFGLGAVGLAVAEGARLNRASKII-GVDINPEKFEIGKKFGITDFINPATCGDKT 261
G TV +FG G +GL A+ A+L A+ ++ G + + + ++ K+ G G++
Sbjct: 165 GDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA----VNGGEED 220
Query: 262 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
+++++ E+TDG GAD EC G + A R+G G+ V +G
Sbjct: 221 LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVG 264
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
| >gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 8e-26
Identities = 89/360 (24%), Positives = 141/360 (39%), Gaps = 42/360 (11%)
Query: 21 CRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDLPKLPLPVIFGHE 78
C I L +EE P E+R+++ +C SD+ ++ +L P++ GHE
Sbjct: 1 CVIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHE 60
Query: 79 AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGT- 137
GVVE+VG V + V R CG C C++ + N C NM G+
Sbjct: 61 VSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLC--------LNMRFLGSA 112
Query: 138 SRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAA 194
RF ++G F EY VVD + V + + L A L L+ + A
Sbjct: 113 MRFPHVQG----------GFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALH-----A 157
Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
AG G V + G G +G V AR A++I+ D+ + + G + +N
Sbjct: 158 VNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNL 217
Query: 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 314
A + G D FE G + + A R G G V +G M G P+
Sbjct: 218 ARDPLAAYAADK-----GDFDVVFEASGAPAALASALRVVRPG-GTVVQVG--MLGGPVP 269
Query: 315 LNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYL-DKELNLGEFITHEVSFHDINKAFDL 373
L ++ + + G + + A A + L +++ IT + +AF L
Sbjct: 270 LPLNALV-AKELD--LRGSFRFDDEFAE-AVRLLAAGRIDVRPLITAVFPLEEAAEAFAL 325
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-24
Identities = 67/221 (30%), Positives = 91/221 (41%), Gaps = 43/221 (19%)
Query: 17 KAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSD--VTFWKSSTDLPKLP 70
KA + PG PL + E+ V P E+ IK+ +C +D + DLP
Sbjct: 2 KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIV----EGDLPPPK 57
Query: 71 LPVIFGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFG-RGY 128
LP+I GHE VG VE+VG V D V +P CGECR C+S + N C GY
Sbjct: 58 LPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY 117
Query: 129 RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP-HIPLGIACLLSCGV 187
DG + EY V D I + A LL G+
Sbjct: 118 T----VDG-------------------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI 154
Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVG-----LAVAEGAR 223
G A K+AG++ G + ++G GA +A +GA
Sbjct: 155 -IGYR-ALKLAGLKPGQRLGLYGFGASAHLALQIARYQGAE 193
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329 |
| >gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 3e-24
Identities = 94/348 (27%), Positives = 146/348 (41%), Gaps = 43/348 (12%)
Query: 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
+K+ ++C SD+ ++ + GHE VG V VG V +K D V+ F
Sbjct: 30 VKVTAAAICGSDLHIYRGH---IPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFT 86
Query: 105 RDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161
CGEC C+ +S C+K FG PN+ DG + EY
Sbjct: 87 IACGECFYCRRGQSGRCAKGGLFGYAGSPNL--DG-------------------AQAEYV 125
Query: 162 VV---DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
V D T ++K+ + A LL + TG A K A V G TVA+ G G VGL
Sbjct: 126 RVPFADGT-LLKLPDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVIGCGPVGLCA 183
Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277
A++ A+++ VD PE+ E G + IN D + ++E T+G GAD
Sbjct: 184 VLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFE---DAEPVERVREATEGRGADVV 239
Query: 278 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY-FGGLKP 336
E +G + ++ AF+ R G +GV ++ +++ T FG
Sbjct: 240 LEAVGGAAALDLAFDLVRP-GGVISSVGVH-TAEEFPFPGLDAY-NKNL--TLRFGRCPV 294
Query: 337 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384
RS L L+L I H + + +A+ L + K L+ ++
Sbjct: 295 RSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVL 342
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344 |
| >gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-23
Identities = 94/379 (24%), Positives = 146/379 (38%), Gaps = 44/379 (11%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD---- 65
GK+ + + R P L +E++ V K EI I++ +C SD+ +++ D
Sbjct: 23 EGKLTNLGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYIL 80
Query: 66 LPKLP-LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 124
P L PV+ GHE GVVE G+ V+ ++ D V CG CR C+S N C
Sbjct: 81 YPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNL 140
Query: 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG------ 178
DG +F EY V+ + +I +
Sbjct: 141 KE---LGFSADG-------------------AFAEYIAVNARYAWEINELREIYSEDKAF 178
Query: 179 IACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237
A L S + G G+ V ++G G +GLA A+ ASK+I +I+
Sbjct: 179 EAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISE 238
Query: 238 EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSRE 296
E+ + K+ G NP D + + E+T G GAD E G S
Sbjct: 239 ERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIA 298
Query: 297 GWGKTVILGVEMHGSPISLNSIEILKGRSVC--GTYFGGLKPRSDIATLAQKYLDKELNL 354
GK V +G P+ L +++ + + V G G+ P I +A +D +
Sbjct: 299 INGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSV-IKLMASGKID----M 353
Query: 355 GEFITHEVSFHDINKAFDL 373
+ IT I +A
Sbjct: 354 TKIITARFPLEGIMEAIKA 372
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 1e-22
Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 22/229 (9%)
Query: 159 EYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
E VV +V + +P A L + +T + A +G VA+ GLG VGL
Sbjct: 56 ERVVVPANLLVPLPDGLPPERAALTALA-ATALNGVRD-AEPRLGERVAVVGLGLVGLLA 113
Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278
A+ A+ A +++GVD + + E+ + G D + T E+ GAD
Sbjct: 114 AQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADT---------ADEIGGRGADVVI 164
Query: 279 ECIGLTSVMNDAFNSSREGWGKTVILG-----VEMHGSPISLNSIEILKGRSVCGTYFGG 333
E G S + A R+ G+ V++G + G + I +
Sbjct: 165 EASGSPSALETALRLLRDR-GRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQV--YGIGRY 221
Query: 334 LKPRSDIAT-LAQKYLD--KELNLGEFITHEVSFHDINKAFDLLLEGKS 379
+PR ++ LD E L ITH V F D +A+ LL E
Sbjct: 222 DRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPP 270
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 1e-22
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 46/323 (14%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KA PG PL + E +V P E+ IK+ +CHSD + + +P L P + G
Sbjct: 2 KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGA--MPGLSYPRVPG 59
Query: 77 HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
HE VG +++VGE V K D V + CG C C+ C G + RD
Sbjct: 60 HEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCE---NGKVTGVTRD 116
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-PLGIACLLSCGVSTGVGAA 194
G + EY + + +I + A LL GV+T A
Sbjct: 117 G-------------------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTT--FNA 155
Query: 195 WKVAGVEVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
+ +G + G VA+ G+G +G LAV A++ + + + +K ++ +K G +I+
Sbjct: 156 LRNSGAKPGDLVAVQGIGGLGHLAVQYAAKM--GFRTVAISRGSDKADLARKLGAHHYID 213
Query: 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW---GKTVILGVEMHG 310
+ + V++ ++E+ GGA I T+ A ++ G GK +ILG G
Sbjct: 214 TSK---EDVAEALQEL--GGAK----LILATAPNAKAISALVGGLAPRGKLLILGAA--G 262
Query: 311 SPISLNSIE-ILKGRSVCGTYFG 332
P++++ ++ I+ +S+ G G
Sbjct: 263 EPVAVSPLQLIMGRKSIHGWPSG 285
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333 |
| >gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 1e-22
Identities = 71/361 (19%), Positives = 128/361 (35%), Gaps = 67/361 (18%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGV 82
PG+ +EE P ++ +++ +C SD+ + P GHE G
Sbjct: 4 PGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGR 62
Query: 83 VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 142
V ++G V + D V
Sbjct: 63 VVALGPGVRGLAVGDRVA------------------------------------------ 80
Query: 143 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP--LGIACLLSCGVSTGVGAAWKVAGV 200
L+ +F EY + D H V + + L C ++ ++ +
Sbjct: 81 --------GLSGGAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALN-----VFRRGWI 127
Query: 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260
G TVA+ G G +GL + A A ++I +D P + + ++ G T+ + + +
Sbjct: 128 RAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---E 184
Query: 261 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-SPISLNSI 318
+ + ++E+T G GAD E +G ++ A E G+ VI G G P+ +
Sbjct: 185 AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDGPRPVPFQTW 243
Query: 319 EILKGRSVCGTYFGGLKPRSDIATLAQKYL-DKELNLGEFITHEVSFHDINKAFDLLLEG 377
KG + + + A K + D L+LG +THE ++ AF+
Sbjct: 244 N-WKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRR 302
Query: 378 K 378
Sbjct: 303 P 303
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312 |
| >gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 95.3 bits (238), Expect = 6e-22
Identities = 90/364 (24%), Positives = 140/364 (38%), Gaps = 51/364 (14%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
L E P ++ IKI +CHSD+ ++ + P++ GHE VG+V
Sbjct: 8 ASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRN--EWGPTKYPLVPGHEIVGIV 65
Query: 84 ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 142
+VG V + K D V + CG C CKS + C K Y DGT
Sbjct: 66 VAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYN-GKYPDGT----- 119
Query: 143 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 202
+ + ++ VVD V KI + A L C T V + K GV
Sbjct: 120 ---------ITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT-VYSPLKRNGVGP 169
Query: 203 GSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 257
G V + G+G AV A A GA + +P K E K G +FI AT
Sbjct: 170 GKRVGVVGIGGLGHLAVKFAKALGAE------VTAFSRSPSKKEDALKLGADEFI--ATK 221
Query: 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 317
+ + + + D + + + ++ + + G G V++G P+ +
Sbjct: 222 DPEAMKKAAGSL-----DLIIDTVSASHDLDPYLSLLKPG-GTLVLVGA--PEEPLPVPP 273
Query: 318 IE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDINKAFDLL 374
I +SV G+ GG R + Q+ LD E + + + IN+A + L
Sbjct: 274 FPLIFGRKSVAGSLIGG---RKET----QEMLDFAAEHGI-KPWVEVIPMDGINEALERL 325
Query: 375 LEGK 378
+G
Sbjct: 326 EKGD 329
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 90.1 bits (224), Expect = 6e-22
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 6/135 (4%)
Query: 213 AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG 272
VGLA + A+ A+++I VD + EK E+ K+ G IN + ++E+T G
Sbjct: 1 GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED---FVERVRELTGG 57
Query: 273 -GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 331
G D +C+G + + A R G V+ P L + +LK ++ G+
Sbjct: 58 RGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDL-LLKELTILGSLG 116
Query: 332 GGLK-PRSDIATLAQ 345
GG + + LA
Sbjct: 117 GGREEFEEALELLAS 131
|
Length = 131 |
| >gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 6e-21
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 24/130 (18%)
Query: 42 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 101
E+ +++ +C SD+ ++ + P + LP+I GHE G+VE VG V +K D V+
Sbjct: 3 EVLVRVKAAGICGSDLHIYRG--EPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60
Query: 102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161
CG+C C+ + N C G + DG F EY
Sbjct: 61 YPLIPCGKCAACREGRENLC---PNGKFLGVHLDGG-------------------FAEYV 98
Query: 162 VVDITHVVKI 171
VV ++V +
Sbjct: 99 VVPARNLVPL 108
|
This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 91.6 bits (228), Expect = 9e-21
Identities = 86/370 (23%), Positives = 134/370 (36%), Gaps = 63/370 (17%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
KA + G P L + E+ P E+ +++ + DV + P PLP I
Sbjct: 2 KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA-PPVRPLPFI 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
G EA GVV +VG V K D V + R
Sbjct: 61 PGSEAAGVVVAVGSGVTGFKVGDRVA---------------------------ALGGVGR 93
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
DG + EY VV +V + + A L T A
Sbjct: 94 DG-------------------GYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLAL 134
Query: 195 WKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
+ AG++ G TV + G G VG A + A+ A+ + V + EK E+ K+ G IN
Sbjct: 135 FDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVS-SSEKLELLKELGADHVIN 193
Query: 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
++ + ++E+T G G D + +G + + G G+ V +G G P
Sbjct: 194 YR---EEDFVEQVRELTGGKGVDVVLDTVG-GDTFAASLAALAPG-GRLVSIGALSGGPP 248
Query: 313 ISLNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEF---ITHEVSFHDIN 368
+ LN + + K ++ G G P + LA+ L L G+ I +
Sbjct: 249 VPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAE--LFDLLASGKLKPVIDRVYPLAEAP 306
Query: 369 KAFDLLLEGK 378
A LL +
Sbjct: 307 AAAAHLLLER 316
|
Length = 326 |
| >gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 1e-20
Identities = 86/297 (28%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KAA+ V+ E + P K E +K+ +CH+D+ ++ D I G
Sbjct: 2 KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHV--ANGDFGDKT-GRILG 58
Query: 77 HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPR 134
HE +G+V+ VG V +K D V + F CG C C + + C GY
Sbjct: 59 HEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTV---- 114
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGA 193
DG E +V + VK+ + A ++C GV+T
Sbjct: 115 DG-------------------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTY--K 153
Query: 194 AWKVAGVEVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
A KV+G++ G +AI+G G +G LA+ + A K+I VDIN +K + K+ G I
Sbjct: 154 AIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTI 212
Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS----REGWGKTVILG 305
N D V+++I+E T GGA +T+V AFN + R G G+ V +G
Sbjct: 213 NSKRVED--VAKIIQEKT-GGAHAAV----VTAVAKAAFNQAVDAVRAG-GRVVAVG 261
|
Length = 338 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 89.2 bits (222), Expect = 8e-20
Identities = 75/298 (25%), Positives = 119/298 (39%), Gaps = 43/298 (14%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
KA + R G P L ++ P E+ +++ +L H D+ + + KLPLP I
Sbjct: 2 KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDL-WVRRGMPGIKLPLPHI 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMP 133
G + GVVE+VG V VK V+ CG C C + + N C+++G G
Sbjct: 61 LGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEH---- 116
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
DG + EY V +++ I ++ A T
Sbjct: 117 VDGG-------------------YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLT---- 153
Query: 194 AWKV----AGVEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
AW + A + G TV + G G+ VG A + A+L A +I + +K E K+ G
Sbjct: 154 AWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGA 212
Query: 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
I+ + + ++E+T G D E +G + S G G+ V G
Sbjct: 213 DYVIDYRK---EDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARG-GRLVTCG 265
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 87.7 bits (218), Expect = 2e-19
Identities = 75/374 (20%), Positives = 132/374 (35%), Gaps = 62/374 (16%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK---------SSTDLP 67
+AA+ R PLV+ ++ P ++ +K+L +C SD+ L
Sbjct: 2 RAAVFR--DGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLM 59
Query: 68 KLPLPVIFGHEAVGVVESVGEYVEE---VKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 124
L ++ GHE G V G E V R LP+ CG+ C
Sbjct: 60 DLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLL--CGQGASC----------- 106
Query: 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL-- 182
G G P P + EY ++ ++++ + + A L
Sbjct: 107 GIGLSPEAP---------------------GGYAEYMLLSEALLLRVPDGLSMEDAALTE 145
Query: 183 -LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
L+ G+ A + A + G + G G +GLAV + I+ D +PE+
Sbjct: 146 PLAVGLH-----AVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRA 200
Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGA-DYCFECIGLTSVMNDAFNSSREGWGK 300
+ G ++PA G FEC+G ++ + G G+
Sbjct: 201 LALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GR 259
Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITH 360
V++GV M I ++ I K ++ F + A + ++++ +T
Sbjct: 260 IVVVGVCMESDNI-EPALAIRKELTL---QFSLGYTPEEFADALDALAEGKVDVAPMVTG 315
Query: 361 EVSFHDINKAFDLL 374
V + AF+ L
Sbjct: 316 TVGLDGVPDAFEAL 329
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 3e-19
Identities = 81/293 (27%), Positives = 120/293 (40%), Gaps = 43/293 (14%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-------TFWKSSTDLPKL 69
+A +C P +EE+ V P EI +K+ +C D+ +FW P +
Sbjct: 2 RAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60
Query: 70 PLPVIFGHEAVGVVESVGEYVEE--VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-R 126
P+I GHE VG V +GE EE VK D V+ C CR C + C K
Sbjct: 61 KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY 120
Query: 127 GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---L 183
G++ N+ G + + + I H K+ IP A L L
Sbjct: 121 GFQNNVN-GGMAEYMRFPKEAIVH-------------------KVPDDIPPEDAILIEPL 160
Query: 184 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243
+C + A A ++ V + G G +GL + ARL K+I +D+ E+ +
Sbjct: 161 ACALH-----AVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA 215
Query: 244 KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR 295
+KFG +NP + V + IKE+T G G D E G S + N R
Sbjct: 216 RKFGADVVLNPP---EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIR 265
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350 |
| >gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 84.6 bits (209), Expect = 4e-18
Identities = 90/367 (24%), Positives = 153/367 (41%), Gaps = 33/367 (8%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
PGKP+V +E+ A ++ +K+ +CH+D++++ P+ GHE G V
Sbjct: 7 PGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHAL-PLALGHEISGRV 65
Query: 84 ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 143
G + +++P CGEC CK+ + C MP + ++
Sbjct: 66 IQAGAGAASWIGKAVIVPAV-IPCGECELCKTGRGTICRA------QKMPGN------DM 112
Query: 144 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 203
+G H + + VVD + +PL +++ V+T AA + AG++ G
Sbjct: 113 QGGFASHIVVPAKG--LCVVDEARLAA--AGLPLEHVSVVADAVTTPYQAAVQ-AGLKKG 167
Query: 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 263
V + G G VG + + A+ A+ ++ +DI+PEK E+ K FG +NP + V
Sbjct: 168 DLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVK 226
Query: 264 QVIKEMTDGGAD-----YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 318
++IK FEC G A + G G V++G M + L+++
Sbjct: 227 KLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYRLSNL 285
Query: 319 EILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFI-THEVSFHDINKAFDLLLEG 377
R++ G + G P A L LD ++ LG F+ + I F
Sbjct: 286 MAFHARAL-GNW--GCPPDRYPAAL-DLVLDGKIQLGPFVERRPLD--QIEHVFAAAHHH 339
Query: 378 KSLRCII 384
K R I
Sbjct: 340 KLKRRAI 346
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 83.0 bits (206), Expect = 1e-17
Identities = 87/377 (23%), Positives = 127/377 (33%), Gaps = 81/377 (21%)
Query: 25 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 84
G LV+ ++ V P E+ +K+ +L D WK P I G + G V
Sbjct: 11 GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVD---WKHQDYGFIPSYPAILGCDFAGTVV 67
Query: 85 SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 144
VG V K D V G F G PN PR+G
Sbjct: 68 EVGSGVTRFKVGDRV-------AG---------------FVHGGNPNDPRNG-------- 97
Query: 145 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST---------GVGAAW 195
+F EY V D KI +I A L G+ T G+
Sbjct: 98 -----------AFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPP 146
Query: 196 -KVAGVEVGSTVAIFGLG--AVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
K + G V I+G G +VG LA G + +I +P+ F++ K G
Sbjct: 147 PKPSPASKGKPVLIWG-GSSSVGTLAIQLAKLAGYK------VITT-ASPKNFDLVKSLG 198
Query: 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
+ D V + I+ T G Y +CI + G + V
Sbjct: 199 ADAVFDYH---DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKL---VS 252
Query: 308 MHGSPISLNSIEILKGRSV-CGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEV---- 362
+ P + +K + V T FG + + + KYL + L G+ H V
Sbjct: 253 LLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVE 312
Query: 363 -SFHDINKAFDLLLEGK 378
+ + DLL +GK
Sbjct: 313 GGLEGVQEGLDLLRKGK 329
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 2e-14
Identities = 83/355 (23%), Positives = 135/355 (38%), Gaps = 53/355 (14%)
Query: 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
L IEE + P A E+R+K+ +C SD ++ P P + GHE GV+++VG
Sbjct: 12 LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHN--PFAKYPRVIGHEFFGVIDAVG 69
Query: 88 EYVEE--VKERDLVLPIFHRDCGECRDCKSSKSNTCSKF---GRGYRPNMPRDGTSRFRE 142
E V+ + ER V P+ CG C C K N C+ G + RDG
Sbjct: 70 EGVDAARIGERVAVDPVI--SCGHCYPCSIGKPNVCTSLVVLG------VHRDG------ 115
Query: 143 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS-CGVSTGVGAAWKVAGVE 201
F+EY+VV + +I I A ++ ++ V G
Sbjct: 116 -------------GFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGR---TGPT 159
Query: 202 VGSTVAIFGLGAVGLAVAEG-ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260
I+G G VGL + + + +I D E+ + K+ G IN A
Sbjct: 160 EQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ---- 215
Query: 261 TVSQVIKEMTDGGAD--YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 318
+ + + + G + S++ +A + + V++G S I I
Sbjct: 216 --EPLGEALEEKGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPSEIVQQGI 272
Query: 319 EILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDL 373
K S+ + K I L++ +D E + ITH F + A +L
Sbjct: 273 -TGKELSIFSSRLNANKFPVVIDWLSKGLIDPE----KLITHTFDFQHVADAIEL 322
|
Length = 339 |
| >gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 72.2 bits (177), Expect = 2e-14
Identities = 61/253 (24%), Positives = 96/253 (37%), Gaps = 34/253 (13%)
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLV-LPIFHR-------DCGECRDCKSSKSNTC-SKF 124
+ GHE VG V ++ D V L + R CG C C+ C S
Sbjct: 1 VLGHEIVGEVVALRG--GFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLR 58
Query: 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 184
G+ + L G H + T +V + +P +A
Sbjct: 59 KYGHEA-LDSGW-----PLSGGYAEHCHLPAG---------TAIVPVPDDLPDAVAAPAG 103
Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
C +T V AA + AG G V + G G +GL A A A++++ D +P++ E+
Sbjct: 104 CATAT-VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELAL 162
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI 303
FG T P +++ + +G G D E G T+ + S G G V+
Sbjct: 163 SFGATALAEPE-----VLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVL 216
Query: 304 LGVEMHGSPISLN 316
G G P++L+
Sbjct: 217 AGSVFPGGPVALD 229
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280 |
| >gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 5e-14
Identities = 80/333 (24%), Positives = 123/333 (36%), Gaps = 76/333 (22%)
Query: 19 AICRIPGKP-LVIEEIEVEPPKAWEIRIKILCTSLCHSDV--------TFWKSSTDLPKL 69
AI PGKP + + +I P E+ ++ L +C +D T L
Sbjct: 3 AIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFL--- 59
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
+ GHEA+GVVE VG+ + DLV+P R G+C +C R R
Sbjct: 60 ----VLGHEALGVVEEVGD-GSGLSPGDLVVPTVRRPPGKCLNC------------RIGR 102
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCG 186
P+ G R +KG +H F+ EY V D ++VK+ P + + L LS
Sbjct: 103 PDFCETGEYTERGIKG--LHGFM-----REYFVDDPEYLVKVPPSL-ADVGVLLEPLSV- 153
Query: 187 VSTGVGAAWKVAGVEVGS--------TVAIFGLGAVGL-----AVAEGAR---LNRASKI 230
V A + A V + G G +GL G LNR
Sbjct: 154 ----VEKAIEQA-EAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNR---- 204
Query: 231 IGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDA 290
D K +I ++ G T ++N + V G D E G+ + +A
Sbjct: 205 --RDPPDPKADIVEELGAT-YVNSSKTPVAEVK------LVGEFDLIIEATGVPPLAFEA 255
Query: 291 FNSSREGWGKTVILGVEMHGSPISLNSIEILKG 323
+ G ++ GV G ++ E+ +
Sbjct: 256 LPALAPN-GVVILFGVPGGGREFEVDGGELNRD 287
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355 |
| >gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 5e-14
Identities = 72/255 (28%), Positives = 105/255 (41%), Gaps = 46/255 (18%)
Query: 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
+K++ T++C SD + T P ++ GHE G V G VE +K D+V F+
Sbjct: 38 LKVVTTNICGSDQHMVRGRTTAPT---GLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFN 94
Query: 105 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGD----------VIHHFLNI 154
CG CR+CK + C N R G + G V + N+
Sbjct: 95 IACGRCRNCKEGHTGVCLNV------NPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNL 148
Query: 155 SSFTEY-----SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209
F + + D+T + I P TG A AGV GSTV I
Sbjct: 149 LKFPDRDQALEKIRDLTMLSDIFP---------------TGYHGAV-TAGVGPGSTVYIA 192
Query: 210 GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIK 267
G G VGLA A A+L A+ +I D+NP + + FG D AT ++ + Q++
Sbjct: 193 GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQ-IEQILG 251
Query: 268 EMTDGGADYCFECIG 282
E D +C+G
Sbjct: 252 EPE---VDCAVDCVG 263
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393 |
| >gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 8e-14
Identities = 59/253 (23%), Positives = 97/253 (38%), Gaps = 40/253 (15%)
Query: 19 AICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFGH 77
+ P P + + +V +K+ + LC SD+ +K+ P+ GH
Sbjct: 13 RVAESP-IPEIKHQDDV--------LVKVASSGLCGSDIPRIFKNGAHY----YPITLGH 59
Query: 78 EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDG 136
E G VE+VG V+++ D V + C C +C + C+K+ G R RDG
Sbjct: 60 EFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSR----RDG 115
Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
EY VV ++ + +P+ + ++ G+ A
Sbjct: 116 -------------------GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHL 155
Query: 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256
G E G V I G G +GL + A A + +DIN EK + K G N
Sbjct: 156 AQGCE-GKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214
Query: 257 CGDKTVSQVIKEM 269
+ V++E+
Sbjct: 215 MSAPQIQSVLREL 227
|
Length = 347 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 71.4 bits (176), Expect = 9e-14
Identities = 86/375 (22%), Positives = 140/375 (37%), Gaps = 70/375 (18%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
KA +C+ G P LV+EE+ EP E+RI++ + D+ + + K PLP +
Sbjct: 2 KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFV 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
G E GVVE+VGE V K
Sbjct: 61 PGSEVAGVVEAVGEGVTGFKV--------------------------------------- 81
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
GD + F E VV V + + A L T A
Sbjct: 82 ----------GDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHAL 131
Query: 195 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
+ A ++ G TV + G G VGLA + A+ A ++I + EK + + G I+
Sbjct: 132 VRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID 190
Query: 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
D + + +K +T G G D ++ +G V + S G G+ +++G P
Sbjct: 191 ---YRDPDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP 245
Query: 313 -ISLNSIEILKGRSVCGTYFGGL------KPRSDIATLAQKYLDKELNLGEFITHEVSFH 365
I N + +LK SV G Y+G R+++A L + ++ ++
Sbjct: 246 QIPANLL-LLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLE 302
Query: 366 DINKAFDLLLEGKSL 380
+A L + K+
Sbjct: 303 QAAEALRALADRKAT 317
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 71.3 bits (175), Expect = 1e-13
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 41/291 (14%)
Query: 26 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK----SSTDLPKLPLPVIFGHEAVG 81
L I+ ++ P ++R+++ +C SDV + K + + + P++ GHE G
Sbjct: 27 NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKE---PMVIGHECAG 83
Query: 82 VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 141
++E VG V+ + D V C C CK + N C P M T
Sbjct: 84 IIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC--------PEMKFFATPPVH 135
Query: 142 -ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL--GIACL-LSCGVSTGVGAAWKV 197
L V+H D+ K+ ++ L G C LS GV A +
Sbjct: 136 GSLANQVVHP------------ADL--CFKLPENVSLEEGAMCEPLSVGVH-----ACRR 176
Query: 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 257
A + + V + G G +GL AR A +I+ VD++ E+ + K+ G + + +T
Sbjct: 177 ANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTN 236
Query: 258 GDKTVSQV--IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
+ S+V I++ GG D F+C+G M+ A ++R G GK ++G+
Sbjct: 237 IEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGM 286
|
Length = 364 |
| >gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 5e-13
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPA 255
AGV+ G TVA+FG G VGL A A L AS++ VD PE+ ++ + G DF +
Sbjct: 172 AGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSD-- 229
Query: 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTS-----------VMNDAFNSSREGWGKTVIL 304
GD + I + GG D +C+G + V+N +R G G I+
Sbjct: 230 --GDP--VEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIV 284
Query: 305 GVEMHGSP 312
GV + P
Sbjct: 285 GVYVAEDP 292
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 7e-13
Identities = 57/274 (20%), Positives = 90/274 (32%), Gaps = 66/274 (24%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSST-DLPKLPLPV 73
KA G P V+E +V P+ E+ +K+ + D+ + L LP+
Sbjct: 2 KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
I GH+ GVV +VG V K D V FG
Sbjct: 62 IPGHDVAGVVVAVGPGVTGFKVGDEV------------------------FG---MTPFT 94
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
R G + EY VV + ++ A +
Sbjct: 95 RGGA-------------------YAEYVVVPADELALKPANLSFEEA----AALPLAGLT 131
Query: 194 AW----KVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
AW ++ G++ G TV I G G VG + A+ R +++I + + + G
Sbjct: 132 AWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAK-ARGARVIAT-ASAANADFLRSLGA 189
Query: 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282
+ I D T + GG D + +G
Sbjct: 190 DEVI------DYTKGDFERAAAPGGVDAVLDTVG 217
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 1e-11
Identities = 89/340 (26%), Positives = 136/340 (40%), Gaps = 44/340 (12%)
Query: 42 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-L 100
++ +KIL +CHSD+ K+ + P +I GHE VG+ VG+ V + KE D V +
Sbjct: 33 DVTVKILFCGVCHSDLHTIKNHWGFSRYP--IIPGHEIVGIATKVGKNVTKFKEGDRVGV 90
Query: 101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160
+ C C C N C K Y + DGT N +++
Sbjct: 91 GVIIGSCQSCESCNQDLENYCPKVVFTYN-SRSSDGTR--------------NQGGYSDV 135
Query: 161 SVVDITHVVKITPHIPLGI-ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVG-LAV 218
VVD V+ I +P A LL G++ + E G + + GLG +G +AV
Sbjct: 136 IVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAV 195
Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278
G +I E+ I + G F+ T SQ +KE G D+
Sbjct: 196 KIGKAFGLRVTVISRSSEKEREAI-DRLGADSFLV------TTDSQKMKEAV-GTMDFII 247
Query: 279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS-VCGTYFGGLKPR 337
+ + + F+ + GK V LG + P+ L ++ GR V G+ GG+K
Sbjct: 248 DTVSAEHALLPLFSLLKVS-GKLVALG--LPEKPLDLPIFPLVLGRKMVGGSQIGGMKET 304
Query: 338 SDIATLAQKY---LDKELNLGEFITHEVSFHDINKAFDLL 374
++ K+ D EL + DIN A D L
Sbjct: 305 QEMLEFCAKHKIVSDIEL---------IKMSDINSAMDRL 335
|
Length = 375 |
| >gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 5e-11
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 18/118 (15%)
Query: 25 GKPLVIEEIEVEPPKAWEIR------IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHE 78
G P + +V PK I ++I T++C SD+ ++ T ++ GHE
Sbjct: 7 GGPGNVAVEDVPDPK---IEHPTDAIVRITTTAICGSDLHMYRGRTGAEP---GLVLGHE 60
Query: 79 AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
A+G VE VG VE +K D V+ F+ CG CR+CK + C N R G
Sbjct: 61 AMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCL------TVNPGRAG 112
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375 |
| >gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 63/286 (22%), Positives = 107/286 (37%), Gaps = 56/286 (19%)
Query: 45 IKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 103
++I +C SD+ +++ + P++ GHE +G + + + + P
Sbjct: 32 VQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSDSSGLKEGQTVAINP-- 89
Query: 104 HRDCGECRDCKSSKSNTCSK---FGRG-YRPNMPRDGTSRFRELKGDVIHHFLNISSFTE 159
+ CG C+ C S N C+ FG Y P++ DG FT
Sbjct: 90 SKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHV--DG-------------------GFTR 128
Query: 160 YSVVDITHVVKITPHI---------PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG 210
Y VVD + PL +A + AA AG G V + G
Sbjct: 129 YKVVDTAQCIPYPEKADEKVMAFAEPLAVA----------IHAA-HQAGDLQGKRVFVSG 177
Query: 211 LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 270
+G +G + + A++I+ D++P + ++ G +NP + + E
Sbjct: 178 VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNP---QNDDLDHYKAE-- 232
Query: 271 DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN 316
G D FE G S +N +R K V++ V M G+P
Sbjct: 233 KGYFDVSFEVSGHPSSINTCLEVTR---AKGVMVQVGMGGAPPEFP 275
|
Length = 343 |
| >gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 3e-10
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 42 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-L 100
++ +KIL +CHSD+ K+ + P+ + GHE VG+V +G+ V++ KE D V +
Sbjct: 39 DVTVKILYCGVCHSDLHTIKNEWGFTRYPI--VPGHEIVGIVTKLGKNVKKFKEGDRVGV 96
Query: 101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160
+ C C C N C K Y ++ DGT N +++
Sbjct: 97 GVIVGSCKSCESCDQDLENYCPKMIFTYN-SIGHDGTK--------------NYGGYSDM 141
Query: 161 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLGAVG-LAV 218
VVD V++ ++PL L C T V + K G+ E G + + GLG +G +AV
Sbjct: 142 IVVDQHFVLRFPDNLPLDAGAPLLCAGIT-VYSPMKYYGMTEPGKHLGVAGLGGLGHVAV 200
Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
G +I N E I + G F+
Sbjct: 201 KIGKAFGLKVTVISSSSNKEDEAI-NRLGADSFL 233
|
Length = 360 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 57.8 bits (141), Expect = 2e-09
Identities = 66/269 (24%), Positives = 93/269 (34%), Gaps = 82/269 (30%)
Query: 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
L E++ V P E+ ++ + D F + L LPLP + G E GVVE+VG
Sbjct: 14 LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYF---RSGLYPLPLPFVLGVEGAGVVEAVG 70
Query: 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 147
V K D V G
Sbjct: 71 PGVTGFKVGDRVA-------------------YAGPPG---------------------- 89
Query: 148 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLLSCGVSTGVG-AAW----KVAGV 200
++ EY VV + +VK+ I A LL G A + V
Sbjct: 90 --------AYAEYRVVPASRLVKLPDGISDETAAALLLQ-------GLTAHYLLRETYPV 134
Query: 201 EVGSTVAIFGL-GAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254
+ G TV + G VGL A A GA +IG + EK E+ + G IN
Sbjct: 135 KPGDTVLVHAAAGGVGLLLTQWAKALGAT------VIGTVSSEEKAELARAAGADHVIN- 187
Query: 255 ATCGDKTVSQVIKEMTDG-GADYCFECIG 282
D V +V +E+T G G D ++ +G
Sbjct: 188 YRDED-FVERV-REITGGRGVDVVYDGVG 214
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 40/206 (19%)
Query: 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSD---VTFWKSSTDLPKLPLPVIFGHEAVGVVE 84
L +E+++ P E+ I++ + D + K P+P I G E GVVE
Sbjct: 14 LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVK------PMPHIPGAEFAGVVE 67
Query: 85 SVGEYVEEVKERDLVLPIFHRD-CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 143
VG++V+ VK+ D V+ +++R G C C S C G + +G
Sbjct: 68 EVGDHVKGVKKGDRVV-VYNRVFDGTCDMCLSGNEMLCRN---GGIIGVVSNG------- 116
Query: 144 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 203
+ EY VV ++ KI I +A L T A K AG+ G
Sbjct: 117 ------------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-KTAGLGPG 163
Query: 204 STVAIF------GLGAVGLAVAEGAR 223
TV +F G+ AV LA GA
Sbjct: 164 ETVVVFGASGNTGIFAVQLAKMMGAE 189
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 1e-08
Identities = 83/377 (22%), Positives = 132/377 (35%), Gaps = 94/377 (24%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KA + V + + EPP +++L +C++D+ +K P P + G
Sbjct: 2 KALVLDGGLDLRVEDLPKPEPPPGE-ALVRVLLAGICNTDLEIYKGYY-----PFPGVPG 55
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPI-FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
HE VG+VE E E+ + +V I CG C C+ C PN
Sbjct: 56 HEFVGIVEEGPE--AELVGKRVVGEINIA--CGRCEYCRRGLYTHC--------PN---- 99
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSV--VDITHVVKITPHI----------PLGIACLL 183
R + G V +F EY ++ HVV P + PL A
Sbjct: 100 -----RTVLGIVDRD----GAFAEYLTLPLENLHVV---PDLVPDEQAVFAEPLAAAL-- 145
Query: 184 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243
+ + G VA+ G G +GL +A+ L ++ V + EK +
Sbjct: 146 ---------EILEQVPITPGDKVAVLGDGKLGLLIAQVLALT-GPDVVLVGRHSEKLALA 195
Query: 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR-EGWGKTV 302
++ G+ TV E GG D E G S + A R G TV
Sbjct: 196 RRLGVE-----------TVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRPRG---TV 241
Query: 303 ILGVEMHGSPISLN-------SIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLG 355
+L + P S + I ++ R CG + + L + +D +
Sbjct: 242 VLK-STYAGPASFDLTKAVVNEITLVGSR--CGPF------APALRLLRKGLVDVD---- 288
Query: 356 EFITHEVSFHDINKAFD 372
IT + +AF+
Sbjct: 289 PLITAVYPLEEALEAFE 305
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 55.2 bits (134), Expect = 2e-08
Identities = 64/261 (24%), Positives = 93/261 (35%), Gaps = 43/261 (16%)
Query: 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87
L + E V P E+ +++ SL + D+ P + P+I + G V +VG
Sbjct: 15 LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNG-RYPPPVKDPLIPLSDGAGEVVAVG 73
Query: 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 147
E V K D V+P F + T P DG
Sbjct: 74 EGVTRFKVGDRVVPTFFPNWL-------DGPPTAEDEASALGG--PIDGVLA-------- 116
Query: 148 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVA 207
EY V+ +V+ H+ A L C T A + + ++ G TV
Sbjct: 117 -----------EYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVL 165
Query: 208 IFGLGAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 262
+ G G V L A A GAR +I + EK E K G IN T D
Sbjct: 166 VQGTGGVSLFALQFAKAAGAR------VIATSSSDEKLERAKALGADHVINYRTTPD--W 217
Query: 263 SQVIKEMTDG-GADYCFECIG 282
+ + ++T G G D+ E G
Sbjct: 218 GEEVLKLTGGRGVDHVVEVGG 238
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 72/278 (25%), Positives = 98/278 (35%), Gaps = 71/278 (25%)
Query: 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSD--VTFWKSSTDLPKLPL 71
KA + PG L +EEIE+ P A E+ +K+ L D V W
Sbjct: 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW----SY 56
Query: 72 PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
P + G + GVV +VG V K D V Y +
Sbjct: 57 PHVPGVDGAGVVVAVGAKVTGWKVGDRVA---------------------------YHAS 89
Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGV 191
+ R G SF EY+VVD V+ + + A L C T
Sbjct: 90 LARGG-------------------SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAY 130
Query: 192 GAAWKVAGVEVGSTVAIFGL-GAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKK 245
A +K +E G T+ I G G VG LA G R + + FE K
Sbjct: 131 QALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-------VITTCSKRNFEYVKS 183
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
G I+ D+ V + IKE+T G G D + +G
Sbjct: 184 LGADHVID---YNDEDVCERIKEITGGRGVDAVLDTVG 218
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 7e-08
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 38/180 (21%)
Query: 42 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-L 100
++ IK++ +CH+D+ K+ DL P++ GHE VG V VG V + D+V +
Sbjct: 36 DVVIKVIYCGICHTDLHQIKN--DLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGV 93
Query: 101 PIFHRDCGECRDCKSSKSNTCSK----FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS 156
+ CGEC CKS C+K + Y P G
Sbjct: 94 GVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQG-------------------G 134
Query: 157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGL 216
F VVD VVKI + A L C AGV V S ++ FGL GL
Sbjct: 135 FASAMVVDQKFVVKIPEGMAPEQAAPLLC------------AGVTVYSPLSHFGLKQSGL 182
|
Length = 357 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 8e-08
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 17/89 (19%)
Query: 24 PGKPLVIEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSSTDLP-------KLPLPVI 74
PLV+E + + P E+ +++L + SD+ + + PLP +
Sbjct: 8 EPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDL--------ITISGAYGSRPPLPAV 59
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIF 103
G+E VGVV VG V + VLP+
Sbjct: 60 PGNEGVGVVVEVGSGVSGLLVGQRVLPLG 88
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 72/328 (21%), Positives = 113/328 (34%), Gaps = 63/328 (19%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
+A + G L I E PK ++ IK+ + +D + P ++
Sbjct: 3 RAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEIL 62
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
G E G VE VG V+ KE D V+ + G GY
Sbjct: 63 -GLEVAGYVEDVGSDVKRFKEGDRVMALLP--------------------GGGY------ 95
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
EY+V HV+ I A + T
Sbjct: 96 -----------------------AEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLL 132
Query: 195 WKVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
K V+ G +V I G VG A A+ A A+ II + EK + KK I
Sbjct: 133 KKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILIR 191
Query: 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313
+V K + G + +C+G + + A + + GK ++ G M G+ +
Sbjct: 192 YPDEEGFA-PKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVD--GKWIVYGF-MGGAKV 247
Query: 314 S-LNSIEILKGR-SVCGTYFGGLKPRSD 339
N + +L+ R S+ + L+ RSD
Sbjct: 248 EKFNLLPLLRKRASIIFST---LRSRSD 272
|
Length = 334 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 7e-07
Identities = 63/273 (23%), Positives = 101/273 (36%), Gaps = 65/273 (23%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
+A G P L + ++ V P E+ +++ + + D T+ ++ PLP +
Sbjct: 2 RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVD-TYIRAGAYPGLPPLPYV 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
G + GVVE+VGE V+ +K D V + G G R
Sbjct: 61 PGSDGAGVVEAVGEGVDGLKVGDRVW--------------------LTNLGWGRRQ---- 96
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA- 193
GT EY VV +V + + G + G+ A
Sbjct: 97 -GT-------------------AAEYVVVPADQLVPLPDGVS------FEQGAALGIPAL 130
Query: 194 -AWKV----AGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
A++ AG + G TV + G GAVG A + AR A ++I + E E+ ++ G
Sbjct: 131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAG 189
Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFE 279
N + ++ I T G G D E
Sbjct: 190 ADAVFNYR---AEDLADRILAATAGQGVDVIIE 219
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 8e-07
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 17 KAAICRIPGKPL-VIEEIEVEP--PKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLP 72
+AA+ G P V+E EV P A E+ ++ + + + D+ W T K LP
Sbjct: 2 RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDL--WTIRGTYGYKPELP 59
Query: 73 VIFGHEAVGVVESVGEYVEEVK 94
I G EAVGVV++VGE V+ ++
Sbjct: 60 AIGGSEAVGVVDAVGEGVKGLQ 81
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 1e-06
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
+A G P L IEE+ V P A E+ I++ L +D ++ + PLP
Sbjct: 2 RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADA-MFRRGAYIEPPPLPAR 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVL 100
G+EA GVVE+VG V D V
Sbjct: 61 LGYEAAGVVEAVGAGVTGFAVGDRVS 86
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 74/382 (19%), Positives = 129/382 (33%), Gaps = 74/382 (19%)
Query: 24 PGKPLVIEEIEVEPPKAW---EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAV 80
PL I I++ P + EI +K+ +L D+ + S T K+ G +
Sbjct: 9 NTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVK-EKGLGRDYS 67
Query: 81 GVVESVGEYVE-EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSR 139
GV+ VG V E K D V I+
Sbjct: 68 GVIVKVGSNVASEWKVGDEVCGIYP----------------------------------- 92
Query: 140 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV-- 197
H + + ++Y +VD K P I+ + +G A+++
Sbjct: 93 ---------HPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILE 143
Query: 198 -AGVEVG--STVAIFGLG-AVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI 252
G ++G S V + G +VG + A+ + ++G + E+ KK G FI
Sbjct: 144 DLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFI 202
Query: 253 NPATC-GDKTVSQVIKEMTDGGA-DYCFECIG---LTSVMNDAFNSSREGWGKTVILGVE 307
+ G K + V++ + G D +C+G L +N + I+G
Sbjct: 203 DYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDY 262
Query: 308 MHG-SPISLNSIEILKG--RSVCGT-------Y-FGGLKPRSDIATLAQKYLDKELNLGE 356
+ NS + R + G+ Y F L P +D + + +
Sbjct: 263 KANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADG-KVKP 321
Query: 357 FITHEVSFHDINKAFDLLLEGK 378
I F D +AF+ L +
Sbjct: 322 PIDSVYPFEDYKEAFERLKSNR 343
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352 |
| >gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 8e-06
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 22 RIPGK-PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-----LPVIF 75
R+ GK L +E+ E+ EI ++++ SLC S +D K+P PVI
Sbjct: 7 RMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVIL 66
Query: 76 GHEAVGVVESVGE 88
GHE G + VG+
Sbjct: 67 GHEFAGTILKVGK 79
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 73/386 (18%), Positives = 121/386 (31%), Gaps = 112/386 (29%)
Query: 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVT----FWKSSTDLPKLPLPVIFGHEAVGVV 83
L + E ++ P A E+ +K+ + + +DV + D P PLP G++ VG V
Sbjct: 15 LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLY---PDQP--PLPFTPGYDLVGRV 69
Query: 84 ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 143
+++G V + D V + G + +
Sbjct: 70 DALGSGVTGFEVGDRVAAL-----------------------------TRVGGNAEYI-- 98
Query: 144 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW----KVAG 199
+D ++V + + A C V V A+ + A
Sbjct: 99 ------------------NLDAKYLVPVPEGVDAAEA---VCLVLNYV-TAYQMLHRAAK 136
Query: 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF-----EIGKKFGITDFIN 253
V G V I G G VG A+ E A L A ++ G E+ E+G
Sbjct: 137 VLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTA--SERNHAALRELG---------- 183
Query: 254 PATCGDKTVSQVIKEM-TDGGADYCFECIGLTSVMNDAFNSSRE---------GWGKTVI 303
AT D + M T GG D F+ +G +++ S +G
Sbjct: 184 -ATPIDYRTKDWLPAMLTPGGVDVVFDGVGG-----ESYEESYAALAPGGTLVCYGGNSS 237
Query: 304 LGVEMHGSPISLN-SIEILKGRSVCG---TYFGGLKP--RSDIATLAQ--KYLDKELNLG 355
L + + K + + F + D Q L L G
Sbjct: 238 LLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKG 297
Query: 356 EF---ITHEVSFHDINKAFDLLLEGK 378
+ I + ++ +A LL GK
Sbjct: 298 KIRPKIAKRLPLSEVAEAHRLLESGK 323
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 27 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 86
PL E V P E+ +++ +C +D+ S DLP V GHE VG V
Sbjct: 14 PLRFVERPVPRPGPGELLVRVRACGVCRTDLHV--SEGDLPVHRPRVTPGHEVVGEVAGR 71
Query: 87 GEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTC 121
G D V + R CG CR C+ N C
Sbjct: 72 GADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLC 107
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 76/375 (20%), Positives = 118/375 (31%), Gaps = 88/375 (23%)
Query: 24 PGKPLVIEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAV 80
+ L++ E+EV P E+ +K+ S+ D + L P P I G +
Sbjct: 8 SPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFA 67
Query: 81 GVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRF 140
G V +VG V K D V FGR G
Sbjct: 68 GEVVAVGSGVTRFKVGDEV------------------------FGRL---PPKGGGA--- 97
Query: 141 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI-----ACLLSCGVSTGVGAAW 195
EY V + + K P G+ A L G+ T + A
Sbjct: 98 ----------------LAEYVVAPESGLAK----KPEGVSFEEAAALPVAGL-TALQALR 136
Query: 196 KVAGVEVGSTVAIFGL-GAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
V+ G V I G G VG +A A GA + GV + E+ + G
Sbjct: 137 DAGKVKPGQRVLINGASGGVGTFAVQIAKALGAH------VTGVC-STRNAELVRSLGAD 189
Query: 250 DFINPATCGDKTVSQVIKEMTDGGA-DYCFECIGLTSVMNDAFNSSRE-GWGKTVILGVE 307
+ I D T + G D F+ +G + + +S G + V
Sbjct: 190 EVI------DYTTEDFVALTAGGEKYDVIFDAVGNSPF--SLYRASLALKPGGRYVS-VG 240
Query: 308 MHGSPISLNSIEILKGRSVCG---TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 364
S + L + + G +F D+ LA+ + +L I
Sbjct: 241 GGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKP--VIDSVYPL 298
Query: 365 HDINKAFDLLLEGKS 379
D +A+ L G++
Sbjct: 299 EDAPEAYRRLKSGRA 313
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 9e-05
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 22 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 81
+ K L + E EV P E+ IK+ + SD+ F K K LPV G E G
Sbjct: 12 PLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTK-ALPVPPGFEGSG 70
Query: 82 VVESVGE 88
V + G
Sbjct: 71 TVVAAGG 77
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 2e-04
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
KA + G P + E+ P ++ +++ + + D + PLP I
Sbjct: 2 KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAAR-PPLPAI 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLV 99
G + GVVE+VGE V + D V
Sbjct: 61 LGCDVAGVVEAVGEGVTRFRVGDEV 85
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 6e-04
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 16 CKAAICRIPGKP---LVIEEIEVEPPKAW-EIRIKILCTSLCHSDV-TFWKSSTDLPKL- 69
KA + G+P L +E E+ PP E+ +K+L + +D+ P
Sbjct: 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60
Query: 70 -PLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 101
P + G+E VG V VG V+ +K D V+P
Sbjct: 61 PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIP 93
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 6e-04
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 185 CGVSTGVGAAWKVA----GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK- 239
GV G+ AA + +E G TVA+ GLG VG +AE L +K+I DIN E
Sbjct: 7 YGVFLGMKAAAEHLLGTDSLE-GKTVAVQGLGKVGYKLAEHL-LEEGAKLIVADINEEAV 64
Query: 240 FEIGKKFGIT 249
+ FG T
Sbjct: 65 ARAAELFGAT 74
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 7e-04
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 68 KLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 99
KLPLP+ G+ +VG V VG V K D V
Sbjct: 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRV 48
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 40.1 bits (95), Expect = 0.001
Identities = 80/386 (20%), Positives = 132/386 (34%), Gaps = 93/386 (24%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
KA + + PG P L + E+ P E+ I++ + +D+ + P I
Sbjct: 2 KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPP-GASDI 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
G E GVV +VG V K D V C G GY
Sbjct: 61 LGLEVAGVVVAVGPGVTGWKVGDRV-------CALLA-------------GGGY------ 94
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
EY VV ++ + + L A L T A
Sbjct: 95 -----------------------AEYVVVPAGQLLPVPEGLSLVEAAALPEVFFT----A 127
Query: 195 WK----VAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
W+ + G++ G TV I G A+ LA A GAR +I + EK E +
Sbjct: 128 WQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGAR------VIATAGSEEKLEACR 181
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI 303
G IN + ++ +KE T G G D + +G + + G+ V+
Sbjct: 182 ALGADVAIN---YRTEDFAEEVKEATGGRGVDVILDMVG-GDYLARNLRALAPD-GRLVL 236
Query: 304 LGVEMHGSPISLNSIEILKGR-SVCGTYFGGLKPRSD------IATLAQKYLDKELNLGE 356
+G+ + G+ L+ +L+ R ++ G+ L+ RS A + G
Sbjct: 237 IGL-LGGAKAELDLAPLLRKRLTLTGS---TLRSRSLEEKAALAAAFREHVWPL-FASGR 291
Query: 357 F--ITHEV-SFHDINKAFDLLLEGKS 379
+ +V + +A + +
Sbjct: 292 IRPVIDKVFPLEEAAEAHRRMESNEH 317
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
KA + PG P L + EI + PK + I++ L S++ + + P + P +
Sbjct: 2 KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHS--PSVKFPRV 59
Query: 75 FGHEAVGVVES 85
G EAVG VE
Sbjct: 60 LGIEAVGEVEE 70
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 390 | |||
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 100.0 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 100.0 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 100.0 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 100.0 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 100.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 100.0 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 100.0 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 100.0 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 100.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 100.0 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 100.0 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 100.0 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 100.0 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 100.0 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 100.0 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 100.0 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 100.0 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 100.0 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 100.0 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 100.0 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 100.0 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 100.0 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 100.0 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 100.0 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 100.0 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 100.0 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 100.0 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 100.0 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 100.0 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 100.0 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 100.0 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 100.0 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 100.0 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 100.0 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 100.0 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 100.0 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 100.0 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 100.0 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 100.0 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 100.0 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 100.0 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 100.0 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 100.0 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 100.0 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 100.0 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 100.0 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 100.0 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 100.0 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 100.0 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 100.0 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 100.0 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 100.0 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 100.0 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 100.0 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 100.0 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 100.0 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 100.0 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 100.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 100.0 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 100.0 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 100.0 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 100.0 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 100.0 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 100.0 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 100.0 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 100.0 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 100.0 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 100.0 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 99.97 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 99.97 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.96 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.96 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 99.88 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.73 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 99.45 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.29 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 99.24 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.58 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.45 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 98.31 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.26 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 98.18 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 98.14 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.03 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.01 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 97.95 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.75 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.69 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 97.68 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 97.68 | |
| PF11017 | 314 | DUF2855: Protein of unknown function (DUF2855); In | 97.65 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 97.6 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 97.56 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 97.52 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.47 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.47 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.45 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 97.44 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.34 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.31 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.31 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.2 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.17 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.13 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 97.08 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.08 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.07 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.06 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.05 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 97.04 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.03 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.02 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.99 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 96.89 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 96.83 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 96.83 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 96.83 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 96.82 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.82 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.82 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 96.81 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 96.8 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 96.78 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 96.76 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 96.75 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 96.75 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.7 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 96.69 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 96.68 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 96.68 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 96.66 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 96.66 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.62 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 96.61 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.6 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 96.59 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 96.58 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 96.58 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.56 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.54 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.53 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 96.52 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 96.5 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.48 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 96.47 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.47 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 96.46 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.45 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 96.45 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.43 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 96.42 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 96.41 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 96.41 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 96.4 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.39 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.38 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.38 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.37 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.36 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 96.36 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 96.35 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 96.35 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 96.33 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.32 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 96.3 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.3 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.28 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 96.28 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 96.27 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 96.25 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 96.24 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 96.23 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.22 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 96.22 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.22 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.2 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.19 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 96.17 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 96.16 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.15 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 96.14 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 96.14 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 96.13 | |
| PRK05717 | 255 | oxidoreductase; Validated | 96.12 | |
| COG0031 | 300 | CysK Cysteine synthase [Amino acid transport and m | 96.12 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 96.11 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.1 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 96.1 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 96.09 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.07 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 96.06 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 96.06 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 96.04 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 96.03 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 96.02 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 96.01 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 96.0 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 96.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 96.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 95.99 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 95.99 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.98 | |
| PRK08643 | 256 | acetoin reductase; Validated | 95.98 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 95.98 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.98 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 95.98 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 95.97 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 95.97 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.96 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 95.96 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 95.96 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 95.95 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 95.94 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 95.94 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 95.93 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.93 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 95.92 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 95.92 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 95.9 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.9 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 95.89 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.89 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 95.88 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 95.88 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 95.88 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 95.88 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 95.88 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 95.88 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 95.88 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 95.87 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 95.86 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 95.86 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 95.85 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 95.83 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 95.82 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 95.81 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 95.81 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 95.81 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 95.81 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 95.81 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 95.81 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 95.79 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 95.79 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 95.79 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 95.78 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 95.78 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 95.77 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 95.76 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 95.76 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 95.75 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.74 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.74 | |
| TIGR01318 | 467 | gltD_gamma_fam glutamate synthase small subunit fa | 95.73 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.73 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 95.72 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 95.72 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 95.71 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 95.69 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.68 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.68 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 95.67 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 95.66 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 95.66 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.64 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 95.64 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.63 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 95.63 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 95.62 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 95.62 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 95.61 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 95.6 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 95.59 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 95.59 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 95.58 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 95.56 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.54 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 95.53 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.52 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 95.52 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 95.51 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 95.47 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.47 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 95.47 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 95.47 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 95.46 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 95.45 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 95.44 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.42 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.4 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.39 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.38 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 95.38 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 95.37 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 95.36 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 95.36 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 95.36 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 95.35 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.35 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 95.33 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.32 | |
| PLN02366 | 308 | spermidine synthase | 95.32 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 95.31 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.31 | |
| PRK12769 | 654 | putative oxidoreductase Fe-S binding subunit; Revi | 95.3 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 95.3 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.29 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 95.26 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.25 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 95.24 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 95.24 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 95.23 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 95.21 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 95.21 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.2 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 95.2 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 95.2 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.19 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 95.18 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 95.18 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 95.16 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 95.16 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 95.15 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 95.14 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 95.14 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 95.14 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 95.12 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 95.1 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.09 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.08 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 95.08 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 95.07 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 95.06 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.04 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 94.99 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.98 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 94.97 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 94.97 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 94.97 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 94.97 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 94.94 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 94.94 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 94.91 | |
| COG0334 | 411 | GdhA Glutamate dehydrogenase/leucine dehydrogenase | 94.85 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 94.84 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 94.83 | |
| PLN02928 | 347 | oxidoreductase family protein | 94.81 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 94.81 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 94.81 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.8 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.74 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 94.74 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 94.73 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 94.72 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.71 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.7 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 94.7 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 94.67 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 94.66 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 94.64 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.64 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 94.61 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 94.6 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 94.58 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 94.57 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 94.56 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 94.51 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 94.51 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 94.51 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 94.49 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 94.48 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 94.47 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.47 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 94.44 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 94.42 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 94.4 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 94.4 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 94.36 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 94.35 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 94.34 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 94.34 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 94.34 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 94.33 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 94.32 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 94.31 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 94.31 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 94.27 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 94.26 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 94.26 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 94.25 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 94.24 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 94.23 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.2 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 94.19 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 94.18 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.18 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 94.14 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 94.14 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 94.12 | |
| KOG1252 | 362 | consensus Cystathionine beta-synthase and related | 94.12 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 94.1 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 94.1 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 94.1 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 94.07 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 94.07 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 94.05 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.03 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 94.01 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 94.0 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 94.0 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 93.98 | |
| cd05313 | 254 | NAD_bind_2_Glu_DH NAD(P) binding domain of glutama | 93.96 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 93.94 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 93.91 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 93.91 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 93.91 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 93.89 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 93.89 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 93.89 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 93.87 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 93.87 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 93.84 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 93.83 | |
| PLN02256 | 304 | arogenate dehydrogenase | 93.83 | |
| PLN03013 | 429 | cysteine synthase | 93.81 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.81 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 93.79 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.79 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 93.78 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 93.74 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 93.73 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 93.73 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 93.73 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 93.68 | |
| PF08704 | 247 | GCD14: tRNA methyltransferase complex GCD14 subuni | 93.67 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 93.56 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.53 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 93.53 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 93.53 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 93.52 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 93.52 | |
| PTZ00079 | 454 | NADP-specific glutamate dehydrogenase; Provisional | 93.5 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 93.47 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 93.45 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 93.44 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 93.43 |
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-65 Score=462.40 Aligned_cols=365 Identities=45% Similarity=0.802 Sum_probs=349.6
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|.+||+++.++++||+++++.+++|++|||+||+.++|+|++|...+.|..+.. +|.++|||++|+|++||++|+++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~---~P~vLGHEgAGiVe~VG~gVt~v 77 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG---FPAVLGHEGAGIVEAVGEGVTSV 77 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC---CceecccccccEEEEecCCcccc
Confidence 568999999999999999999999999999999999999999999999987755 99999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|+..+..+||.|.+|.+++.|+|.....+.+-|..++|..++. ..|..++|+.+-++|++|.++++..++++++
T Consensus 78 kpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~ 156 (366)
T COG1062 78 KPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDP 156 (366)
T ss_pred CCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCC
Confidence 999999999999999999999999999999998888999999987776 7888999999999999999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+.+++.++.+.|...|.+.+..+.+++++|++|.|.|.|++|++++|-|+..|+.+||+++.+++|++++++||+++++|
T Consensus 157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn 236 (366)
T COG1062 157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVN 236 (366)
T ss_pred CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCc-CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecC
Q 016363 254 PATCGDK-TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (390)
..+ . ++.+.+.+++++|+|++|||+|+...+++++.+..++ |+.+.+|.......+++++..+..+.+++|+.++
T Consensus 237 ~~~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G 312 (366)
T COG1062 237 PKE---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFG 312 (366)
T ss_pred chh---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeeccceEEEEeec
Confidence 987 4 6999999999999999999999999999999999997 9999999988888888999988889999999999
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
....+.+++++++++.+|++++.+++++.++|||++|||+.+.+++.+|-|+.+
T Consensus 313 ~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 313 GARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred CCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 999899999999999999999999999999999999999999999999888764
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-65 Score=467.81 Aligned_cols=335 Identities=32% Similarity=0.493 Sum_probs=305.1
Q ss_pred cceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 13 ~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
+++|||++++++++|+++.+++.|+|+++||+|+|+|||+|++|++.++|.++.. .+|.++|||++|+|+++|++|++
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~--~~P~ipGHEivG~V~~vG~~V~~ 78 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP--KLPLIPGHEIVGTVVEVGEGVTG 78 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC--CCCccCCcceEEEEEEecCCCcc
Confidence 5799999999999999999999999999999999999999999999999999988 79999999999999999999999
Q ss_pred CCCCCEEee-ecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 93 VKERDLVLP-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 93 ~~vGd~V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
|++||||.+ ....+|+.|+||.+|++++|++... .|++.+| +|+||+++++++++++
T Consensus 79 ~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~i 136 (339)
T COG1064 79 LKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKI 136 (339)
T ss_pred CCCCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEEC
Confidence 999999988 8999999999999999999998444 5666665 8999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
|+++++++||.+.|+..|.|++| +.++++||++|+|+|+|++|++++|+|+++|+ +|++++++++|++.++++|++++
T Consensus 137 P~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~ 214 (339)
T COG1064 137 PEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHV 214 (339)
T ss_pred CCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEE
Confidence 99999999999999999999998 66999999999999999999999999999998 99999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 330 (390)
++..+ ++..+.+++. +|++||+++ +.+++.+++.|+++ |+++.+|........+++.+. +++++++.|+.
T Consensus 215 i~~~~---~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~ 285 (339)
T COG1064 215 INSSD---SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSL 285 (339)
T ss_pred EEcCC---chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEe
Confidence 99765 6777777653 999999999 78899999999999 999999977523334455554 44599999998
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
.++ +.++++++++..++++.+. +.+.++++++++||+.|.+++.. |+||.+.
T Consensus 286 ~g~---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 286 VGT---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred cCC---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 887 6899999999999987765 54699999999999999998875 9999875
|
|
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-64 Score=446.98 Aligned_cols=373 Identities=58% Similarity=0.989 Sum_probs=354.2
Q ss_pred CCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCC
Q 016363 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
+..+.+|||++.+++++||.++++++++|+.+||+||++++++|++|...+.|..+.. .+|.++|||++|+|+.+|++
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~--~fP~IlGHEaaGIVESvGeg 79 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEG--LFPVILGHEAAGIVESVGEG 79 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccc--cCceEecccceeEEEEecCC
Confidence 4678999999999999999999999999999999999999999999999999987666 79999999999999999999
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCC-CCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g-~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
|+++++||+|+.++...|++|.+|++++.|.|.+.....+.+ +..+|..++- .+|..+||+.+-.+|+||-+++...+
T Consensus 80 V~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v 158 (375)
T KOG0022|consen 80 VTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISV 158 (375)
T ss_pred ccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeeccee
Confidence 999999999999999999999999999999999988776544 4458888887 88999999999899999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~ 248 (390)
++++++.+++.++.+.|.+.|+|.+.++.+++++|+++.|.|.|++|+++++-|++.|+.++|+++-+++|.+.+++||+
T Consensus 159 ~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGa 238 (375)
T KOG0022|consen 159 AKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGA 238 (375)
T ss_pred EecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEe
Q 016363 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG 328 (390)
Q Consensus 249 ~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 328 (390)
.+++|+.+.. ..+.+.+.++|++|+|+-|||+|+...+.+++.+...++|+-+.+|.....+.+++.++.++.++.+.|
T Consensus 239 Te~iNp~d~~-~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~G 317 (375)
T KOG0022|consen 239 TEFINPKDLK-KPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKG 317 (375)
T ss_pred ceecChhhcc-ccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEE
Confidence 9999998532 368999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
+.++.++.+++++.+++.+.++++.+..+|++++||+++++||+.|.+++.+|.|+.+
T Consensus 318 s~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 318 SAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred EecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999888864
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-59 Score=418.74 Aligned_cols=346 Identities=25% Similarity=0.409 Sum_probs=302.5
Q ss_pred cceeeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCC
Q 016363 13 VIRCKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 13 ~~t~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
..+|+|+++.++++ ++++++|+|++ .|+||+|++.++|||++|+|.+....... ..+.|+++|||.+|+|+++|+.|
T Consensus 2 ~~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~V 80 (354)
T KOG0024|consen 2 AADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEV 80 (354)
T ss_pred CcccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccc
Confidence 45799999999998 99999999986 99999999999999999999998765444 13589999999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+++++||||+..+..+|+.|++|++|+||.|+.+.+. +.++.. |++++|++.+++++++
T Consensus 81 k~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~------------------G~la~y~~~~~dfc~K 139 (354)
T KOG0024|consen 81 KHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVD------------------GTLAEYYVHPADFCYK 139 (354)
T ss_pred cccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcC------------------CceEEEEEechHheee
Confidence 9999999999999999999999999999999998873 333322 5899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++|++++|.+. ++++++|+. +++++++|++|||+|||++|+++...|+.+|+.+|++++-.+.|++.+++||++.
T Consensus 140 LPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~ 217 (354)
T KOG0024|consen 140 LPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATV 217 (354)
T ss_pred CCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeE
Confidence 99999999999987 799999987 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCC-CcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEE
Q 016363 251 FINPATCG-DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVC 327 (390)
Q Consensus 251 v~~~~~~~-~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~ 327 (390)
+.+..... ...+.+.+....++ .+|++|||+|....++.++..++.+ |.+++.|+. ....+|+..+... ++++.
T Consensus 218 ~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~ 294 (354)
T KOG0024|consen 218 TDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG--AEEIQFPIIDVALKEVDLR 294 (354)
T ss_pred EeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC--CCccccChhhhhhheeeee
Confidence 88765511 12344445444454 6999999999999999999999999 999998865 3456666666555 99999
Q ss_pred eeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc--eEEEEecCC
Q 016363 328 GTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWMDK 388 (390)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl~~~~ 388 (390)
|++-+. +.+++.+++++++|+++++++|++.|+++++.+||+.+..++. +|+++..++
T Consensus 295 g~fry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 295 GSFRYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeeeec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 996443 4589999999999999999999999999999999999988774 499998764
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-57 Score=403.73 Aligned_cols=349 Identities=26% Similarity=0.408 Sum_probs=306.7
Q ss_pred CCCCccceeeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 8 PKAGKVIRCKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 8 ~~~~~~~t~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
+++..|.+++++.++.+++ ++++.+++.|+|+++||+|+|++||||++|++++.|.+... .+|.++|||++|+|++
T Consensus 2 ~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s--~~PlV~GHEiaG~Vvk 79 (360)
T KOG0023|consen 2 SSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLS--KYPLVPGHEIAGVVVK 79 (360)
T ss_pred CcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcc--cCCccCCceeeEEEEE
Confidence 3456899999999999998 46668999999999999999999999999999999999986 8999999999999999
Q ss_pred eCCCCCcCCCCCEEe-eecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEee
Q 016363 86 VGEYVEEVKERDLVL-PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164 (390)
Q Consensus 86 vG~~v~~~~vGd~V~-~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~ 164 (390)
+|++|++|++||||- .....+|++|+||..+.+++|+++..++ .|...+|. -..|+|++|++++
T Consensus 80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~-~g~~~DGt--------------~~~ggf~~~~~v~ 144 (360)
T KOG0023|consen 80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTY-NGVYHDGT--------------ITQGGFQEYAVVD 144 (360)
T ss_pred ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEec-cccccCCC--------------CccCccceeEEEe
Confidence 999999999999994 5778899999999999999999766554 46666664 2337899999999
Q ss_pred CCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-hhHHHH
Q 016363 165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIG 243 (390)
Q Consensus 165 ~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~ 243 (390)
+.++++||++++++.||.+.|+..|.|..| ...++.||++|.|.|+|++|++++|+|+++|. +|++++++. +|.+.+
T Consensus 145 ~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~ 222 (360)
T KOG0023|consen 145 EVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAI 222 (360)
T ss_pred eeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHH
Confidence 999999999999999999999999999987 88999999999999997799999999999999 999999988 566677
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhc
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILK 322 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~ 322 (390)
+.||++..++..+ ++++.+.+.+.+++++|.|.+. ..++++.++..++.+ |++|++|.+.. .+.++.+. ++.
T Consensus 223 ~~LGAd~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~ 295 (360)
T KOG0023|consen 223 KSLGADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILG 295 (360)
T ss_pred HhcCcceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcc
Confidence 7899999998763 3899999999888888888766 455689999999999 99999998765 44444444 444
Q ss_pred ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 323 GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
.++|.|+..++ +.+.++++++..++.+.+. + +..+++++++||++|++++.. |.|+++..
T Consensus 296 ~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 296 RKSIKGSIVGS---RKETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred cEEEEeecccc---HHHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 88999999888 6789999999999977665 6 889999999999999999875 99998754
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-54 Score=421.72 Aligned_cols=377 Identities=55% Similarity=0.948 Sum_probs=310.5
Q ss_pred CCCCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEe
Q 016363 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 86 (390)
Q Consensus 7 ~~~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v 86 (390)
+.+...|++|||++++++++++++.+++.|+|+++||+|||+++|||++|++.+.|..... ..+|.++|||++|+|+++
T Consensus 2 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~-~~~p~i~GhE~~G~V~~v 80 (381)
T PLN02740 2 SETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQ-RAYPRILGHEAAGIVESV 80 (381)
T ss_pred ccccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCccc-CCCCccccccceEEEEEe
Confidence 3455678999999999998779999999999999999999999999999999998875322 257899999999999999
Q ss_pred CCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCC-CCCCCCCCcccccccC--ceeeccccccccceeEEe
Q 016363 87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSRFRELKG--DVIHHFLNISSFTEYSVV 163 (390)
Q Consensus 87 G~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~-~g~~~~g~~~~~~~~~--~~~~~~~~~g~~a~~~~v 163 (390)
|++++.|++||+|++.+..+|+.|.+|..++++.|.+...... ......|..++ ...| ....+....|+|+||+++
T Consensus 81 G~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~G~~aey~~v 159 (381)
T PLN02740 81 GEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRF-STKGDGQPIYHFLNTSTFTEYTVL 159 (381)
T ss_pred CCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCccc-ccccCCCcccccccCccceeEEEE
Confidence 9999999999999999999999999999999999988543210 00000000000 0000 000111224799999999
Q ss_pred eCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 164 DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 164 ~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
+.+.++++|+++++++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.+
T Consensus 160 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a 239 (381)
T PLN02740 160 DSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG 239 (381)
T ss_pred ehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence 99999999999999999999999999999887889999999999999999999999999999986799999999999999
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcc
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 323 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 323 (390)
+++|+++++++.+ .+.++.+.+++++++++|+|||++|+...+..+++++++++|+++.+|.......+++.+..+.++
T Consensus 240 ~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~ 318 (381)
T PLN02740 240 KEMGITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDG 318 (381)
T ss_pred HHcCCcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcC
Confidence 9999999998765 112477888888766899999999987778999999987339999999764333345555545568
Q ss_pred eeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 324 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 324 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
+++.|+..+.+....++.++++++.++++++.++++++|+|+|+++|++.+.++...|++|++
T Consensus 319 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 319 RSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred CeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 899998776655556789999999999999888899999999999999999888778999874
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-53 Score=411.87 Aligned_cols=367 Identities=45% Similarity=0.822 Sum_probs=302.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++..++++++++++|.|+|+++||+|||.++++|++|++.+.|..+.. .+|.++|||++|+|+++|+++++|++
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~ 79 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEG--VFPVILGHEGAGIVEAVGEGVTSVKV 79 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCC--CCCeeeccccEEEEEEECCCCccCCC
Confidence 7899999988779999999999999999999999999999999998876544 67999999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+..+|+.|.+|..++.+.|.+.......|+..+|..++. ..|...++....|+|+||+.+|.+.++++|+++
T Consensus 80 GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 80 GDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cCCCcccccccCccceeeEEechhheEECCCCC
Confidence 9999999889999999999999999987543222233222211100 001111122224699999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|+++++++++++.++++|+++++++.
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~ 238 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN 238 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence 99999999999999999987888999999999999999999999999999987799999999999999999999999865
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (390)
+ .+.++.+.+++++++++|++|||+|+...+..+++++++++|+++.+|.......+++.+..+..+..+.|+..+...
T Consensus 239 ~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 317 (368)
T TIGR02818 239 D-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVK 317 (368)
T ss_pred c-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCC
Confidence 3 123567778887777999999999987778999999987339999999754333344445545455567777655443
Q ss_pred chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 336 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.+.++.+++++++++++++.++++++|+|+++++|++.+.++...|+++.+
T Consensus 318 ~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 318 GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 456789999999999999888899999999999999999887767999875
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-53 Score=412.09 Aligned_cols=360 Identities=37% Similarity=0.672 Sum_probs=301.5
Q ss_pred eeEEEeecCCC--------CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC
Q 016363 16 CKAAICRIPGK--------PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (390)
Q Consensus 16 ~~a~~~~~~~~--------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (390)
|||+++.++|. .+++.++|.|+|+++||+|||.+++||++|++.+.|..+ . .+|.++|||++|+|+++|
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~--~~p~i~GhE~~G~V~~vG 77 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-R--PLPMALGHEAAGVVVEVG 77 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-C--CCCccCCccceeEEEEeC
Confidence 78999998763 389999999999999999999999999999999988653 2 478999999999999999
Q ss_pred CCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCc
Q 016363 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (390)
Q Consensus 88 ~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (390)
+++++|++||+|++.+..+|+.|.+|+.++++.|.+.......|...+|...+.. .|.-..+..+.|+|+||+.++++.
T Consensus 78 ~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~-~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 78 EGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRL-RGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccc-cCcccccccCcccceeeEEecccc
Confidence 9999999999999988889999999999999999875432222222221100000 000001112236899999999999
Q ss_pred eEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 168 v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
++++|+++++++|+.++++++|||+++.+.+++++|++|||.|+|++|++++|+|+.+|+++|++++++++|++.++++|
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~G 236 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELG 236 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcC
Confidence 99999999999999999999999998878889999999999999999999999999999967999999999999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeE
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV 326 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i 326 (390)
+++++++.+ .++.+.+++++++++|+||||+|....+..++++++++ |+++.+|........+++...+.. ++++
T Consensus 237 a~~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i 312 (371)
T cd08281 237 ATATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTL 312 (371)
T ss_pred CceEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEE
Confidence 999998876 67888888887778999999999877789999999999 999999975433344566555554 8999
Q ss_pred EeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEE
Q 016363 327 CGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 383 (390)
Q Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 383 (390)
.|+..+.....++++++++++.+|++++.++++++|+|+++++||+.+.++... |+|
T Consensus 313 ~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 313 KGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 998776554457899999999999999888899999999999999999988877 544
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-53 Score=409.05 Aligned_cols=368 Identities=51% Similarity=0.875 Sum_probs=305.2
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
.+|||+++..+++++++.+.|.|+|+++||+|||+++++|++|++.+.|..+.. .+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~ 78 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG--LFPVILGHEGAGIVESVGEGVTSV 78 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC--CCCceeccceeEEEEEeCCCCccC
Confidence 368999999888789999999999999999999999999999999998876544 689999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+..+|+.|.+|..++.+.|.+.....+.|...+|..++. -.|...++....|+|+||+.++++.++++|+
T Consensus 79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 157 (368)
T cd08300 79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINP 157 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccc-cCCcccccccccccceeEEEEchhceEeCCC
Confidence 999999999899999999999999999987543212233222210000 0111112222346899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.+.++++|++++++
T Consensus 158 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~ 237 (368)
T cd08300 158 EAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVN 237 (368)
T ss_pred CCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEc
Confidence 99999999999999999998878889999999999999999999999999999967999999999999999999999998
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
+.+ .+.++.+.+.+++++++|+|||++|+...+..+++++++++|+++.+|........++.+..+..+..+.++..+.
T Consensus 238 ~~~-~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (368)
T cd08300 238 PKD-HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGG 316 (368)
T ss_pred ccc-cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecc
Confidence 765 1124778888887779999999999876689999999774499999996532223444454455566777776666
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
+...+++.+++++++++++++.++++++|+|+++++||+.+.++...|++++
T Consensus 317 ~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 317 WKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred cCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 5556789999999999999988889999999999999999988877799875
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-53 Score=408.88 Aligned_cols=368 Identities=56% Similarity=0.963 Sum_probs=306.9
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
++|||+++.+++++++++++++|+|+++||+|||.+++||++|++.++|..+.. .+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~ 78 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTP--LFPRILGHEAAGIVESVGEGVTDL 78 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCC--CCCcccccccceEEEEeCCCCCcc
Confidence 489999999988889999999999999999999999999999999998876544 689999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+..+|+.|.+|..+.++.|.+.......|...++....-...|...+++...|+|+||+.++.+.++++|+
T Consensus 79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 99999999999999999999999999998754321111111000000000011112222347899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.+++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~ 238 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN 238 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 99999999999999999998878899999999999999999999999999999867999999999999999999999987
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
+.+ .+..+.+.+++++++++|++||++|....+..+++++++++|+++.+|.......+++++..+++++++.|+..+.
T Consensus 239 ~~~-~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 317 (369)
T cd08301 239 PKD-HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGG 317 (369)
T ss_pred ccc-cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCC
Confidence 754 1134677788777669999999999887788999999983289999997654334556655556789999987776
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEE
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 384 (390)
+..+.+++++++++.++++++.++++++|+|+++++||+.+.+++..|+++
T Consensus 318 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 318 YKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred CChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 655668899999999999988888899999999999999999988889887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-53 Score=407.25 Aligned_cols=354 Identities=32% Similarity=0.590 Sum_probs=300.6
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||||+++.+++++++++++|.|+|+++||+|||.++++|++|++.+.|..+ . .+|.++|||++|+|+++|+++++|+
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-D--EFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-c--cCCcccccceEEEEEEeCCCCcccC
Confidence 799999999998899999999999999999999999999999999988643 2 4789999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCC-CCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY-RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+||+|++.+..+|+.|.+|..++.+.|....... ..++. +| .........|+|+||+.++++.++++|+
T Consensus 78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~-~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~ 147 (358)
T TIGR03451 78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLT-DG---------TELSPALGIGAFAEKTLVHAGQCTKVDP 147 (358)
T ss_pred CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccc-cC---------cccccccccccccceEEEehhheEECCC
Confidence 9999999999999999999999999997522100 00000 00 0000001236899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++|+.+++.+.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|++++++
T Consensus 148 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~ 227 (358)
T TIGR03451 148 AADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN 227 (358)
T ss_pred CCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 99999999999999999988877889999999999999999999999999999966999999999999999999999998
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~ 331 (390)
+.+ .++.+.+.+++++ ++|+||||+|+...+..++++++++ |+++.+|........++++..++ ++.++.+++.
T Consensus 228 ~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~ 303 (358)
T TIGR03451 228 SSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY 303 (358)
T ss_pred CCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence 876 6788889888887 8999999999877789999999999 99999997543323455554444 4888888865
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
+.....++++++++++++|++++.++++++|+++++++||+.+.+++..|+++.
T Consensus 304 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 304 GDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred CCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 543346779999999999999988889999999999999999988877788875
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-52 Score=400.97 Aligned_cols=373 Identities=52% Similarity=0.900 Sum_probs=302.2
Q ss_pred CCCCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEe
Q 016363 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 86 (390)
Q Consensus 7 ~~~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v 86 (390)
+.+.+....|||+++.++++.+++.++|+|+|+++||+|||.++|||++|++.+.+.. .+|.++|||++|+|+++
T Consensus 4 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~v 78 (378)
T PLN02827 4 SISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESI 78 (378)
T ss_pred cccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEc
Confidence 3445566789999999987679999999999999999999999999999999887642 36789999999999999
Q ss_pred CCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCC-CCCcccccccCceeeccccccccceeEEeeC
Q 016363 87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 87 G~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
|+++++|++||+|++.+..+|+.|.+|..++++.|.+..... .|... +....+ ...|....++...|+|+||+.+++
T Consensus 79 G~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~G~~aeyv~v~~ 156 (378)
T PLN02827 79 GEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLER-KGVMHSDQKTRF-SIKGKPVYHYCAVSSFSEYTVVHS 156 (378)
T ss_pred CCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccc-cccccCCCcccc-cccCcccccccccccceeeEEech
Confidence 999999999999999988999999999999999998743210 11100 000000 000000000012369999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
+.++++|+++++++++.+++++.++|+++++..++++|++|||+|+|++|++++|+|+.+|++.|++++++++|.+++++
T Consensus 157 ~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~ 236 (378)
T PLN02827 157 GCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT 236 (378)
T ss_pred hheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 99999999999999999998889999887777889999999999999999999999999998668899989999999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhccee
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 325 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 325 (390)
+|+++++++.+ .+.++.+.+++++++++|+|||++|....+..+++.+++++|+++.+|.......+......+.++++
T Consensus 237 lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 315 (378)
T PLN02827 237 FGVTDFINPND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRT 315 (378)
T ss_pred cCCcEEEcccc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCce
Confidence 99999998754 11357777888776689999999998766899999998854899999975432222222223556999
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecC
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
+.|+..+.+....++.+++++++++++++.++++++|+|+++.+|++.+.+++..|+||.+.
T Consensus 316 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 316 LKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred EEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 99987765544567899999999999998888999999999999999999888789999875
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=395.31 Aligned_cols=338 Identities=28% Similarity=0.450 Sum_probs=292.0
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++. +++.+++.|+|+++||+|||.++++|++|++.+.+..... ...|.++|||++|+|+++|+++++|++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 78 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAP-AYQGVIPGHEPAGVVVAVGPGVTHFRV 78 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCcc-CCCCceeccCceEEEEEECCCCccCCC
Confidence 78999998866 9999999999999999999999999999999987764322 146889999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|+..+..+|++|.+|+.++++.|.+... .+|...+ |+|+||+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~-------------------G~~ae~~~v~~~~~~~~P~~~ 137 (339)
T cd08239 79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRD-------------------GGHAEYMLVPEKTLIPLPDDL 137 (339)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCC-------------------CcceeEEEechHHeEECCCCC
Confidence 9999999999999999999999999986543 1233333 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++|+.++++++|||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.+++++
T Consensus 138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~ 216 (339)
T cd08239 138 SFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSG 216 (339)
T ss_pred CHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999987 668899999999999999999999999999994499999999999999999999999887
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 334 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (390)
+ .+ .+.+.+++++ ++|+||||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.|+....
T Consensus 217 ~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~- 289 (339)
T cd08239 217 Q---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS- 289 (339)
T ss_pred c---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC-
Confidence 6 45 6777777777 9999999999988678899999999 99999996542 22222222344588999986544
Q ss_pred CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 335 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.++++++++++.++++++.++++++|+++++++||+.+.++..+|+++++
T Consensus 290 --~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 --VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred --HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 46799999999999999888899999999999999999887666999874
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-50 Score=390.70 Aligned_cols=365 Identities=52% Similarity=0.923 Sum_probs=302.6
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
+-|||+++.+.+++++++++|.|.++++||+|||+++++|++|++.+.|..+ . .+|.++|||++|+|+++|++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-T--LFPVILGHEGAGIVESVGEGVTNL 77 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-C--CCCeecccceeEEEEeeCCCCccC
Confidence 3588999998887799999999999999999999999999999999988654 3 578999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+..+|+.|.+|..++++.|.+..+. ..|...++.-++ ...|...+++...|+|+||+.++.+.++++|+
T Consensus 78 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~ 155 (365)
T cd08277 78 KPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRF-TCKGKKIYHFLGTSTFSQYTVVDENYVAKIDP 155 (365)
T ss_pred CCCCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccc-ccCCcccccccccccceeeEEEchhheEECCC
Confidence 9999999998999999999999999999885432 112222110000 00011111222347899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.++++++|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++++++
T Consensus 156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~ 235 (365)
T cd08277 156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFIN 235 (365)
T ss_pred CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEec
Confidence 99999999999999999998878889999999999999999999999999999867999999999999999999999998
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
..+ .+.++.+.+++++++++|+||||+|....+..+++++++++|+++.+|.... ...++++..+..++++.|+..+.
T Consensus 236 ~~~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~ 313 (365)
T cd08277 236 PKD-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGG 313 (365)
T ss_pred ccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCC
Confidence 754 1124567777777678999999999877688999999873399999996542 23345555555588899988776
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
+....+++++++++.++++++.++++++|+|+++++||+.+.+++..|+++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 314 FKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred CChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 6555678999999999999988889999999999999999988876798873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-50 Score=385.82 Aligned_cols=338 Identities=19% Similarity=0.326 Sum_probs=277.7
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccc-cCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
.-+|++++++++. +++++++.| ++++||||||.++|||++|+++++ |........+|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 3478999999988 999999987 689999999999999999999876 3322211257999999999999999 6789
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||+|+..+..+|+.|++|..++++.|.+... .|... ++....|+|+||++++++.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~--------------~~~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAM--------------YFPHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccc--------------ccCCCCCceeeeEEechHHeEECC
Confidence 9999999999999999999999999999987543 12100 000012589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++++ +..++++||+++ +.....+|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++
T Consensus 142 ~~l~~~~aa-~~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMA-FAEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHH-hhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 999987665 445788999987 556667899999999999999999999999997799999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
++.+ .++.+.. +. .+++|+||||+|.+..+..++++++++ |+++.+|.... ..+++...+ .+++++.|+..
T Consensus 220 ~~~~---~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~g~~~ 291 (343)
T PRK09880 220 NPQN---DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEISLKGSFR 291 (343)
T ss_pred cCCc---ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCcEEEEEee
Confidence 8766 4443322 21 236999999999877689999999999 99999996533 234444444 44889998853
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-eEEEEec
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM 386 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~~ 386 (390)
. .+++++++++++++++++.++++++|+|+++++|++.+.++.. +|+++.+
T Consensus 292 ~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 292 F----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred c----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 3 3578999999999999988889999999999999999988765 4999864
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-49 Score=375.17 Aligned_cols=316 Identities=25% Similarity=0.329 Sum_probs=268.5
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++.+.+++ +++.++|.|.|++|||||||+++|+|+.|...++|..+.. .++|.++|.|++|+|+++|++|+.|
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~-~~~P~i~G~d~aG~V~avG~~V~~~ 79 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPV-RPLPFIPGSEAAGVVVAVGSGVTGF 79 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCC-CCCCCcccceeEEEEEEeCCCCCCc
Confidence 789999998876 8899999999999999999999999999999999972222 2699999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||||+... .. + ..|+|+||+.+|++.++++|+
T Consensus 80 ~~GdrV~~~~-~~------------------------~---------------------~~G~~AEy~~v~a~~~~~~P~ 113 (326)
T COG0604 80 KVGDRVAALG-GV------------------------G---------------------RDGGYAEYVVVPADWLVPLPD 113 (326)
T ss_pred CCCCEEEEcc-CC------------------------C---------------------CCCcceeEEEecHHHceeCCC
Confidence 9999998753 00 0 125999999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++|+++||+++++++|||+++....++++|++|||+|+ |++|++++|+|+.+|+ ++++++.++++.++++++|+++++
T Consensus 114 ~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi 192 (326)
T COG0604 114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVI 192 (326)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEE
Confidence 99999999999999999999989899999999999987 9999999999999998 788888888888899999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (390)
++.+ .+|.+.+++++++ ++|+|||++|+.. +..++++|+++ |+++.+|...+....+++...+.. ++.+.|..
T Consensus 193 ~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~ 267 (326)
T COG0604 193 NYRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVT 267 (326)
T ss_pred cCCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEec
Confidence 9887 7799999999999 9999999999988 88899999999 999999976632233444444443 77777776
Q ss_pred cCCC---CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcC-Cc-eEEEEec
Q 016363 331 FGGL---KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG-KS-LRCIIWM 386 (390)
Q Consensus 331 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~-~~-~kvvl~~ 386 (390)
.... ...+.+.++.+++++|++++. ++.+|||++..+|..+.... +. +|+|+++
T Consensus 268 ~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 268 LGSRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ceecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 5543 124567789999999977665 77999999966666554443 44 5999874
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-49 Score=378.79 Aligned_cols=343 Identities=27% Similarity=0.397 Sum_probs=281.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCc-ccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV-IFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|++++++.++...++++.+.|.+.++||+|||.++|||++|++.+++..+.. ..|. ++|||++|+|+++| .++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~--~~~~~i~GHE~~G~V~evG-~~~~~~ 77 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV--PPGDIILGHEFVGEVVEVG-VVRGFK 77 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC--CCCCcccCccceEEEEEec-cccCCC
Confidence 6788888887645577777677899999999999999999999999987666 4555 99999999999999 778899
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE-cCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK-ITP 173 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~-~p~ 173 (390)
+||||++.+..+|+.|.+|+.++++.|.+.++ .|....+. .-.|+|+||+.+|.+++++ +|+
T Consensus 78 ~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~---~g~~~~~~--------------~~~G~~aEyv~vp~~~~~~~~pd 140 (350)
T COG1063 78 VGDRVVVEPNIPCGHCRYCRAGEYNLCENPGF---YGYAGLGG--------------GIDGGFAEYVRVPADFNLAKLPD 140 (350)
T ss_pred CCCEEEECCCcCCCCChhHhCcCcccCCCccc---cccccccC--------------CCCCceEEEEEeccccCeecCCC
Confidence 99999999999999999999999999996553 12111100 0125899999999755555 588
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~ 252 (390)
++ ..+++.+..+++++|++.......+++++|+|+|+|++|++++++++..|+.+||+++.+++|++++++ +|++.++
T Consensus 141 ~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~ 219 (350)
T COG1063 141 GI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV 219 (350)
T ss_pred CC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEee
Confidence 88 556666666899998874466666777799999999999999999999999999999999999999998 6777777
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (390)
+... .+....+.+++.+ ++|++|||+|...++..+++.++++ |+++.+|....... .++...+ .+++++.|+.
T Consensus 220 ~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~ 294 (350)
T COG1063 220 NPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSL 294 (350)
T ss_pred cCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEecc
Confidence 6655 3677788888988 9999999999988899999999999 99999998765432 4444444 4599999984
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc--eEEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl~~ 386 (390)
.. ....+++.+++++.+|++++.+++++.++++++++||+.+.++.. .|+++++
T Consensus 295 ~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 295 RP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 21 123579999999999999999999999999999999999987553 4999864
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-49 Score=383.83 Aligned_cols=346 Identities=25% Similarity=0.370 Sum_probs=275.7
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCC-------CCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPK-------AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (390)
-|||+++.+++. ++++++|.|+|+ +|||||||+++|||++|++++.|..+ . .+|.++|||++|+|+++|
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~--~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-A--PTGLVLGHEITGEVIEKG 77 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-C--CCCccccceeEEEEEEEc
Confidence 489999999986 999999999874 68999999999999999999988643 2 478999999999999999
Q ss_pred CCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCC---CCCCCCCCCcccccccCceeeccccccccceeEEee
Q 016363 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY---RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164 (390)
Q Consensus 88 ~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~---~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~ 164 (390)
++|++|++||||++.+..+|+.|.+|+.++++.|.+..... .+|+...+ ...|+|+||+.+|
T Consensus 78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------------~~~G~~aey~~v~ 142 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG---------------GWVGGQSEYVMVP 142 (393)
T ss_pred CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC---------------CCCCceEEEEEec
Confidence 99999999999999999999999999999999998643110 01211000 0025899999999
Q ss_pred CC--ceEEcCCCCCc----chhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 165 IT--HVVKITPHIPL----GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 165 ~~--~v~~~p~~~~~----~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
.. .++++|++++. .+++.+.+++++||+++ ...++++|++|||.|+|++|++++|+|+.+|++.|++++++++
T Consensus 143 ~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~ 221 (393)
T TIGR02819 143 YADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPA 221 (393)
T ss_pred hhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHH
Confidence 64 79999998754 34677778899999987 5688999999999888999999999999999955676778889
Q ss_pred hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccCh--------------HHHHHHHHHhccCCceEEE
Q 016363 239 KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT--------------SVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 239 ~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~--------------~~~~~~~~~l~~~~G~~v~ 303 (390)
|+++++++|++.+....+ .++.+.+.+++++ ++|++||++|.+ .+++.+++.++++ |+++.
T Consensus 222 r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~ 297 (393)
T TIGR02819 222 RLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGI 297 (393)
T ss_pred HHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEE
Confidence 999999999975433333 4677888888877 899999999986 3689999999999 99999
Q ss_pred EcccCCCCC-----------cccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCcccee-eeeccccHHHH
Q 016363 304 LGVEMHGSP-----------ISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT-HEVSFHDINKA 370 (390)
Q Consensus 304 ~g~~~~~~~-----------~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~~~~A 370 (390)
+|....... +++....+ .+++++.|.. ....+.+.++++++++|++++.++++ ++|+|+++++|
T Consensus 298 ~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a 374 (393)
T TIGR02819 298 PGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEG 374 (393)
T ss_pred eeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHH
Confidence 997532111 11222222 2255666532 11123346899999999999988776 78999999999
Q ss_pred HHHHhcCCceEEEEecC
Q 016363 371 FDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 371 ~~~~~~~~~~kvvl~~~ 387 (390)
|+.+.++..+|+++.++
T Consensus 375 ~~~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 375 YAEFDAGAAKKFVIDPH 391 (393)
T ss_pred HHHHhhCCceEEEEeCC
Confidence 99998887779999874
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-49 Score=378.41 Aligned_cols=345 Identities=21% Similarity=0.337 Sum_probs=285.9
Q ss_pred CCCCCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 6 ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 6 ~~~~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
.+|.+..||-++++.+.+..+.+++.+++.|.|+++||+|||.++|||++|++.+.|..+.. .+|.++|||++|+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 3 KSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFT--RYPIVPGHEIVGIVTK 80 (360)
T ss_pred CChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCC--CCCccCCcceeEEEEE
Confidence 35777899999999999887779999999999999999999999999999999998865433 5789999999999999
Q ss_pred eCCCCCcCCCCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCC----CCCCCCCCcccccccCceeecccccccccee
Q 016363 86 VGEYVEEVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~ 160 (390)
+|+++++|++||+|++.+. .+|+.|.+|+.++++.|.+..+.+. .|... .|+|+||
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~-------------------~G~~aey 141 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKN-------------------YGGYSDM 141 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcC-------------------CCccceE
Confidence 9999999999999986543 5899999999999999987543210 01111 2589999
Q ss_pred EEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 161 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 161 ~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
++++++.++++|+++++++++.+++.+.|||+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++.
T Consensus 142 ~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~ 220 (360)
T PLN02586 142 IVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKE 220 (360)
T ss_pred EEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchh
Confidence 9999999999999999999999999999999988666678899999999999999999999999999 788887776664
Q ss_pred -HHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh
Q 016363 241 -EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 319 (390)
Q Consensus 241 -~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~ 319 (390)
+.++++|+++++++.+ . +.+++.++ ++|+|||++|...+++.++++++++ |+++.+|.... ..+++...
T Consensus 221 ~~~~~~~Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~ 290 (360)
T PLN02586 221 DEAINRLGADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PLELPIFP 290 (360)
T ss_pred hhHHHhCCCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CCccCHHH
Confidence 5567899999987654 2 24555443 7999999999876789999999999 99999996532 23445544
Q ss_pred hh-cceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 320 IL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 320 ~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
+. ++..+.|+..+. .++++++++++.+|++++. + ++|+|+++++||+.+.+++.. |+++++..
T Consensus 291 ~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~ 355 (360)
T PLN02586 291 LVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDVAN 355 (360)
T ss_pred HHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 44 477777776543 4679999999999988754 5 689999999999999988765 99998744
|
|
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-48 Score=371.14 Aligned_cols=338 Identities=21% Similarity=0.332 Sum_probs=282.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++++++. +++.+.|.|+| +++||+|||.++++|++|++.+..... . .+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-H--YYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-C--CCCcccccceEEEEEEeCCCCCCCC
Confidence 68999999876 99999999987 599999999999999999975432211 1 3678999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..+.++.|.+... .|...+ |+|+||+.++++.++++|++
T Consensus 77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~lP~~ 134 (347)
T PRK10309 77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRD-------------------GGNAEYIVVKRKNLFALPTD 134 (347)
T ss_pred CCCEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCC-------------------CccceeEEeehHHeEECcCC
Confidence 99999999999999999999999999976433 232223 58999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++++++.+. +++++|+++ +...+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.+.++++|+++++++
T Consensus 135 ~s~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~ 212 (347)
T PRK10309 135 MPIEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNS 212 (347)
T ss_pred CCHHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecC
Confidence 9999998774 466688875 67889999999999999999999999999999558999999999999999999999987
Q ss_pred CCCCCcCHHHHHHhhcCC-Ccc-EEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCccc-ch-HhhhcceeEEeee
Q 016363 255 ATCGDKTVSQVIKEMTDG-GAD-YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NS-IEILKGRSVCGTY 330 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D-~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~-~~~~~~~~i~g~~ 330 (390)
++ .+ .+.+.+++.+ ++| ++|||+|+...+..++++++++ |+++.+|.......++. .. ..+.+++++.|+.
T Consensus 213 ~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~ 287 (347)
T PRK10309 213 RE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSW 287 (347)
T ss_pred cc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEe
Confidence 65 34 5567777766 898 9999999987789999999999 99999996543211211 11 2234588999986
Q ss_pred cCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+... ..++++++++++++|++++.++++++|+|+++++|++.+.++... |+++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred ccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 64322 246789999999999998888899999999999999999887764 999976
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-47 Score=368.78 Aligned_cols=334 Identities=25% Similarity=0.402 Sum_probs=282.8
Q ss_pred EEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CCCCCCCCcccccceeEEEEEeCCCCCcCCCCC
Q 016363 19 AICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERD 97 (390)
Q Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd 97 (390)
+++++++++++++++|.|+|+++||+|||.++++|++|++.+.+.. +.. .+|.++|||++|+|+++|++++.+ +||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNH--ALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccC--CCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 4677787779999999999999999999999999999999874432 222 578999999999999999999887 999
Q ss_pred EEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC----
Q 016363 98 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP---- 173 (390)
Q Consensus 98 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~---- 173 (390)
+|++.+..+|+.|.+|+.++.+.|..... .|...+ |+|+||+.++.+.++++|+
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~-------------------G~~ae~~~v~~~~~~~ip~~~~~ 136 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQ-------------------GGFASHIVVPAKGLCVVDEARLA 136 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCc---cCcCCC-------------------CcccceEEechHHeEECCccccc
Confidence 99999999999999999999999976433 232222 4899999999999999999
Q ss_pred --CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 174 --HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 174 --~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
++++++++.+++++.|||+++ ....+++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++
T Consensus 137 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~ 214 (349)
T TIGR03201 137 AAGLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLT 214 (349)
T ss_pred ccCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceE
Confidence 899999999999999999987 45889999999999999999999999999999 89999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-Ccc----EEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-cee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GAD----YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS 325 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D----~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~ 325 (390)
+++.+....++.+.+++++++ |+| +||||+|+...++.++++++++ |+++.+|..... .+++...+.. +.+
T Consensus 215 i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~ 291 (349)
T TIGR03201 215 LNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAK--TEYRLSNLMAFHAR 291 (349)
T ss_pred ecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCC--cccCHHHHhhcccE
Confidence 987651123577788888877 886 8999999988788899999999 999999976432 3444444443 778
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+.|++... .++++++++++++|++++.+++ ++|+|+++++||+.+.++... |+++++
T Consensus 292 ~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 292 ALGNWGCP---PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EEEEecCC---HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 88875432 4679999999999999887777 479999999999999888765 988853
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=369.70 Aligned_cols=334 Identities=23% Similarity=0.323 Sum_probs=273.2
Q ss_pred EEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCC
Q 016363 18 AAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERD 97 (390)
Q Consensus 18 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd 97 (390)
+++..+..++++..+++.|+|+++||+|||.++|||++|++.+.|..... .+|.++|||++|+|+++|+++++|++||
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~--~~p~i~GhE~aG~Vv~vG~~v~~~~vGd 86 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFS--RYPIIPGHEIVGIATKVGKNVTKFKEGD 86 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCC--CCCcccCceeeEEEEEECCCCCccCCCC
Confidence 33444444458888999999999999999999999999999998865333 5789999999999999999999999999
Q ss_pred EEeeeccc-CCCCCccccCCCCCCCcCCCCCCC----CCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 98 LVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 98 ~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+|++.+.. +|+.|.+|+.++++.|.+...... .|... .|+|+||+.++++.++++|
T Consensus 87 rV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~-------------------~G~~aey~~v~~~~~~~lP 147 (375)
T PLN02178 87 RVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRN-------------------QGGYSDVIVVDHRFVLSIP 147 (375)
T ss_pred EEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcC-------------------CCccccEEEEchHHeEECC
Confidence 99866554 699999999999999987543110 01111 2589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh-HHHHHhcCCcE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITD 250 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~~g~~~ 250 (390)
+++++++++.+++...|||+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|+++++++++ .+.++++|+++
T Consensus 148 ~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~ 226 (375)
T PLN02178 148 DGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADS 226 (375)
T ss_pred CCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcE
Confidence 999999999999999999998744433 4689999999999999999999999999 89998877654 67888999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 329 (390)
++++.+ . +.+.+.++ ++|+||||+|...++..++++++++ |+++.+|.... ..+++...+ .+++++.|+
T Consensus 227 ~i~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i~g~ 296 (375)
T PLN02178 227 FLVTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK--PLDLPIFPLVLGRKMVGGS 296 (375)
T ss_pred EEcCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC--CCccCHHHHHhCCeEEEEe
Confidence 988654 2 34555543 7999999999887689999999999 99999996532 234455444 448889988
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCCC
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL 389 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~~ 389 (390)
..+. .+++.++++++++|++++. + ++|||+++++||+.+.+++.. |+++++.++
T Consensus 297 ~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 351 (375)
T PLN02178 297 QIGG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDVANS 351 (375)
T ss_pred CccC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEeccc
Confidence 6544 4678999999999988754 5 679999999999999988765 999987543
|
|
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=363.52 Aligned_cols=369 Identities=48% Similarity=0.787 Sum_probs=299.2
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
.-.+||++++..++++++++++|.|++.++||+|||+++++|++|++.+.|... . .+|.++|||++|+|+++|++++
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~ 80 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-T--PFPVILGHEAAGIVESVGEGVT 80 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-C--CCCccccccceEEEEEeCCCCc
Confidence 345699999999887799999999999999999999999999999999988752 2 4788999999999999999999
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
.+++||+|++.+..+|+.|.+|..++.+.|++.....-.|...++.-+. -..|...+++...|+|+||++++.+.++++
T Consensus 81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~e~~~v~~~~~~~l 159 (373)
T cd08299 81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRF-TCKGKPIHHFLGTSTFSEYTVVDEIAVAKI 159 (373)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCcccc-ccCCcccccccCCCcccceEEecccceeeC
Confidence 9999999999888999999999999999998754311011111110000 001112222333479999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
|+++++++++.+++++.|||+++....++++|++|||+|+|++|++++++|+.+|+++|+++++++++++.++++|++++
T Consensus 160 P~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~ 239 (373)
T cd08299 160 DAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATEC 239 (373)
T ss_pred CCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE
Confidence 99999999999999999999988788999999999999889999999999999998679999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHh-ccCCceEEEEcccCCCCCcccchHhhhcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS-REGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (390)
++..+ .+.++.+.+.+++++++|++|||+|++..+..++..+ +++ |+++.+|........++.+..+.++.++.++.
T Consensus 240 i~~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~ 317 (373)
T cd08299 240 INPQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAV 317 (373)
T ss_pred ecccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEE
Confidence 98754 1123667777776668999999999866677767765 456 99999997543334455554455688888887
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.+.+...+++.++++.+.++.+++.++++++|+++++++|++.+.+++..|+++.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 318 FGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred ecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 77665566788888888888777777788999999999999999887767888763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-47 Score=366.35 Aligned_cols=336 Identities=20% Similarity=0.297 Sum_probs=265.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCC-CCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++..++.++++.++|.|+|+++||||||+++|||++|++.++|..+..+ ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 68899986554499999999999999999999999999999999998753221 146899999999999999999 9999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++++.|...... ..|... ..|+|+||++++++.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~------------------~~G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKG------------------LHGFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCC------------------CCccceeEEEeccccEEECCCC
Confidence 999999998889999999999999999864321 112110 1258999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHH------HhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC---ChhhHHHHHh
Q 016363 175 IPLGIACLLSCGVSTGVGAAWK------VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKK 245 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~------~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~ 245 (390)
++ +++.+..++.+++.++.. ..+.++|++|||+|+|++|++++|+|+++|+ +|+++++ +++|++++++
T Consensus 141 ~~--~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA--DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC--cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 99 344444566665554322 2336799999999999999999999999999 8999997 6889999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccc----hHh-h
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN----SIE-I 320 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~----~~~-~ 320 (390)
+|++. +++.+ .++.+ . + ..+++|+||||+|....+..+++.++++ |+++.+|........+++ ... +
T Consensus 218 ~Ga~~-v~~~~---~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~ 289 (355)
T cd08230 218 LGATY-VNSSK---TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLV 289 (355)
T ss_pred cCCEE-ecCCc---cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHh
Confidence 99987 45544 34433 2 1 2238999999999877689999999999 999999976542333444 122 3
Q ss_pred hcceeEEeeecCCCCchhhHHHHHHHHHcCCC----CCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 321 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKEL----NLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.+++++.|+.... .++++++++++.++++ .+.++++++|+++++.+||+.+.++. .|++|++
T Consensus 290 ~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 290 LGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred hcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 4588999985443 4678899999998862 35667899999999999999886543 5999874
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-46 Score=361.98 Aligned_cols=348 Identities=25% Similarity=0.416 Sum_probs=291.0
Q ss_pred eEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc----
Q 016363 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE---- 92 (390)
Q Consensus 17 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---- 92 (390)
||++++++++.+++.+.+.|.|+++||+|||.++++|++|+....|..+.. .+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~~ 79 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRV--PLPIILGHEGVGRVVALGGGVTTDVAG 79 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCC--CCCcccccCCceEEEEeCCCccccccC
Confidence 789999998679999999999999999999999999999999998876433 57889999999999999999986
Q ss_pred --CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCC-CCcccccccCceeeccccccccceeEEeeCC-ce
Q 016363 93 --VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD-GTSRFRELKGDVIHHFLNISSFTEYSVVDIT-HV 168 (390)
Q Consensus 93 --~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~-g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~v 168 (390)
|++||+|++.+..+|+.|.+|+.+..+.|.+... .|...+ +. ....|+|++|+.++++ .+
T Consensus 80 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~ 143 (361)
T cd08231 80 EPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCDD-------------PHLSGGYAEHIYLPPGTAI 143 (361)
T ss_pred CccCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccccC-------------CCCCcccceEEEecCCCce
Confidence 9999999999999999999999999999987643 122111 00 0012689999999986 79
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~ 248 (390)
+++|+++++.+++.++++++|||+++.+...+++|++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|+
T Consensus 144 ~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~ 223 (361)
T cd08231 144 VRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGA 223 (361)
T ss_pred EECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence 99999999999999989999999998666667799999999889999999999999999789999999999999999999
Q ss_pred cEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeE
Q 016363 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSV 326 (390)
Q Consensus 249 ~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i 326 (390)
+.++++++....++...+.+++++ ++|++|||+|+...+..++++++++ |+++.+|........++++..+. +++++
T Consensus 224 ~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
T cd08231 224 DATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTI 302 (361)
T ss_pred CeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEE
Confidence 999887651112234578888877 9999999999876688999999999 99999996543333445544334 48888
Q ss_pred EeeecCCCCchhhHHHHHHHHHcC--CCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 327 CGTYFGGLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.++..+. .+++.++++++.++ .+++.++++++|+++++++||+.+.++..+|++|++
T Consensus 303 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 303 IGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred EEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 8886543 45788899999988 666777888999999999999999887767999864
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=358.43 Aligned_cols=320 Identities=18% Similarity=0.255 Sum_probs=269.7
Q ss_pred EEeecCCC----CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 19 AICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 19 ~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
+.+.+++. .++++++|.|.|+++||+|||.++|+|++|++.+.|..+.. ..|.++|||++|+|+++|+++++|+
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH--RPRVTPGHEVVGEVAGRGADAGGFA 79 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC--CCCccCCcceEEEEEEECCCCcccC
Confidence 45555553 38999999999999999999999999999999998875433 4578999999999999999999999
Q ss_pred CCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+||+|+..+. .+|+.|.+|..++++.|.+..+ .|...+ |+|+||+.++++.++++|+
T Consensus 80 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~lP~ 137 (329)
T TIGR02822 80 VGDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTD-------------------GGYAEYTTVPAAFAYRLPT 137 (329)
T ss_pred CCCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccC-------------------CcceeEEEeccccEEECCC
Confidence 9999987553 4799999999999999987543 233333 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.+++++.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 138 GYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGG 215 (329)
T ss_pred CCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecc
Confidence 999999999999999999988 56899999999999999999999999999999 8999999999999999999999987
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeecC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 332 (390)
..+ .. .+++|+++++.+....+..++++++++ |+++.+|..... ..+++... +.+++++.++...
T Consensus 216 ~~~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~ 281 (329)
T TIGR02822 216 AYD---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSN 281 (329)
T ss_pred ccc---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecC
Confidence 533 11 126899999888777789999999999 999999964322 12344443 3458888887643
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
. ++++.++++++++++++ +++++|+|+++++|++.+.+++.. |+|+
T Consensus 282 ~---~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 282 T---RADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred C---HHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 2 56788899999999875 357999999999999999988776 9887
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-47 Score=328.50 Aligned_cols=320 Identities=24% Similarity=0.274 Sum_probs=276.3
Q ss_pred CCccceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC
Q 016363 10 AGKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (390)
...|+..|-+++++.|+. ++++++|.|+|+|+|++||-.|+|+|..|....+|-+... ++|++||-|++|+|+++|
T Consensus 3 ~~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~--plPytpGmEaaGvVvAvG 80 (336)
T KOG1197|consen 3 AASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPA--PLPYTPGMEAAGVVVAVG 80 (336)
T ss_pred CCCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCC--CCCcCCCcccceEEEEec
Confidence 357899999999999875 8999999999999999999999999999999999988655 799999999999999999
Q ss_pred CCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCc
Q 016363 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (390)
Q Consensus 88 ~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (390)
++|+++++||||+-+.. +|.|+|++.+|...
T Consensus 81 ~gvtdrkvGDrVayl~~-------------------------------------------------~g~yaee~~vP~~k 111 (336)
T KOG1197|consen 81 EGVTDRKVGDRVAYLNP-------------------------------------------------FGAYAEEVTVPSVK 111 (336)
T ss_pred CCccccccccEEEEecc-------------------------------------------------chhhheecccccee
Confidence 99999999999986421 26899999999999
Q ss_pred eEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc
Q 016363 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246 (390)
Q Consensus 168 v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~ 246 (390)
++++|+.+++.+||++...++|||.-+++.-.+++|++|||+.| |++|+++.|+++..|+ .+|+++.+.+|++++++.
T Consensus 112 v~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~aken 190 (336)
T KOG1197|consen 112 VFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKEN 190 (336)
T ss_pred eccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhc
Confidence 99999999999999988899999998888889999999999976 9999999999999999 999999999999999999
Q ss_pred CCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ce
Q 016363 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR 324 (390)
Q Consensus 247 g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~ 324 (390)
|+++.++++. +|+.+.+.+++.+ |+|+++|++|.+. +...+.+|++. |.++.+|..+... -+++...+.. .+
T Consensus 191 G~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~asgl~-~p~~l~~ls~k~l 264 (336)
T KOG1197|consen 191 GAEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNASGLI-DPIPLNQLSPKAL 264 (336)
T ss_pred CCcceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEeccccCCC-CCeehhhcChhhh
Confidence 9999999988 8999999999988 9999999999988 99999999999 9999999765321 1222221111 34
Q ss_pred eEEe-eecCCCCchhh----HHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCCC
Q 016363 325 SVCG-TYFGGLKPRSD----IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL 389 (390)
Q Consensus 325 ~i~g-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~~ 389 (390)
++.. +.++....+.. ..+++.++.+|.++++ |+++|||+++.+|+..++++.+. |+++.+.+.
T Consensus 265 ~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 265 QLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred hhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence 3332 23333333333 3467888889987776 99999999999999999998876 999987653
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-46 Score=358.59 Aligned_cols=337 Identities=27% Similarity=0.443 Sum_probs=287.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC---------CCCCCcccccceeEEEEEe
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP---------KLPLPVIFGHEAVGVVESV 86 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~---------~~~~p~~~G~e~~G~V~~v 86 (390)
|||+++.+++. +++++++.|+|+++||+||+.++++|++|++.+.+..... ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 78999998876 9999999999999999999999999999998765431100 0136889999999999999
Q ss_pred CCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC
Q 016363 87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 166 (390)
Q Consensus 87 G~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 166 (390)
|++++.|++||+|++.+..+|++|.+|.++..++|.+... .|+.. ..|+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGG------------------GGGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCC------------------CCCceeeEEEechH
Confidence 9999999999999999999999999999999999986543 22211 02589999999999
Q ss_pred ceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc
Q 016363 167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246 (390)
Q Consensus 167 ~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~ 246 (390)
.++++|+++++++++.+ .++.|||+++ ...++++|++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998876 5788999988 888999999999999999999999999999997899999999999999999
Q ss_pred CCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ce
Q 016363 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR 324 (390)
Q Consensus 247 g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~ 324 (390)
|++.++++.+ .++.+.+++++++ ++|++||++|....+..++++++++ |+++.+|... ...+++...+.. ++
T Consensus 217 ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~ 290 (351)
T cd08233 217 GATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEK 290 (351)
T ss_pred CCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCc
Confidence 9999998877 6788889888887 7999999999876689999999999 9999999754 234555544444 88
Q ss_pred eEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccH-HHHHHHHhcCCc--eEEEEe
Q 016363 325 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI-NKAFDLLLEGKS--LRCIIW 385 (390)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~-~~A~~~~~~~~~--~kvvl~ 385 (390)
++.|+.... .+++++++++++++++++.++++++|+++++ ++|++.+.++.. +|++|.
T Consensus 291 ~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 291 TLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 999886443 4679999999999999887888899999996 799999888774 599873
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=356.11 Aligned_cols=341 Identities=23% Similarity=0.332 Sum_probs=279.6
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
+.++|+++.++++++++.+++.|+|+++||+|||.+++||++|++.+.|..... .+|.++|||++|+|+++|+++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~E~~G~Vv~vG~~v~~~ 85 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMS--NYPMVPGHEVVGEVVEVGSDVSKF 85 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcC--CCCccCCceeeEEEEEECCCcccc
Confidence 348899999999889999999999999999999999999999999998865433 578999999999999999999999
Q ss_pred CCCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 94 KERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 94 ~vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
++||+|++.+. .+|+.|.+|..++++.|.+....+..++ ..| ....|+|+||+.++.+.++++|
T Consensus 86 ~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g--------------~~~~G~~aey~~v~~~~~~~iP 150 (357)
T PLN02514 86 TVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG--------------KPTQGGFASAMVVDQKFVVKIP 150 (357)
T ss_pred cCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC--------------ccCCCccccEEEEchHHeEECC
Confidence 99999986443 3799999999999999987532211000 001 0012589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v 251 (390)
+++++++++.+++++.|||+++......++|++|+|+|+|++|++++|+|+.+|+ +||++++++++.+.+ +++|++.+
T Consensus 151 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~ 229 (357)
T PLN02514 151 EGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDY 229 (357)
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEE
Confidence 9999999999999999999988665667899999999889999999999999999 788888888776555 56999888
Q ss_pred EcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (390)
+++.+ . +.+.+.+. ++|++||++|....++.++++++++ |+++.+|.... ..+++...+ .++.++.|+.
T Consensus 230 i~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~ 299 (357)
T PLN02514 230 LVSSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKVITGSF 299 (357)
T ss_pred ecCCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcEEEEEe
Confidence 76544 1 23444443 7999999999876689999999999 99999997543 234444444 4488999987
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
.+. ..+++++++++++++++ +++ ++|+|+++.+||+.+.++... |+++.++.
T Consensus 300 ~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 300 IGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred cCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 654 46789999999999765 446 689999999999999988775 99998764
|
|
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-45 Score=354.80 Aligned_cols=362 Identities=46% Similarity=0.818 Sum_probs=301.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
+||+++.+.+.++.+.+.++|.+++++++|++.++++|+.|++.+.+... . .+|.++|||++|+|+++|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~--~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-T--PLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-C--CCCcccccceeEEEEEeCCCcccCCC
Confidence 57899998887799999999999999999999999999999999888653 2 46789999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+..+|+.|.+|..++.+.|.........|...+|...+. .+|...+++.+.|+|++|+.++++.++++|+++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~ 156 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFT-CKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDA 156 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceee-ccCCccccccccccccceEEecCCceEECCCCC
Confidence 9999999889999999999999999987544322232222211110 011122333345799999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+++++.+||+++.+.+++++|++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++++++..
T Consensus 157 ~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 236 (365)
T cd05279 157 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR 236 (365)
T ss_pred CHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence 99999999999999999888889999999999998899999999999999995688888899999999999999999876
Q ss_pred CCCCc--CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhc-cCCceEEEEcccCCCCCcccchHhhhcceeEEeeecC
Q 016363 256 TCGDK--TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR-EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 332 (390)
Q Consensus 256 ~~~~~--~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (390)
+ . ++.+.+++++++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|+...
T Consensus 237 ~---~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~ 312 (365)
T cd05279 237 D---QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFG 312 (365)
T ss_pred c---ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEecc
Confidence 5 4 67778888775699999999997666889999999 88 9999998654333456666666557788888766
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
.....+.+.+++++++++.+++.++++++|+++++++|++.+.+++..|+++.
T Consensus 313 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 313 GWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred CCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 66667789999999999988876677899999999999999988776777763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-45 Score=354.37 Aligned_cols=363 Identities=33% Similarity=0.615 Sum_probs=295.8
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|+|||+++.+++.++++.+.+.|++.++||+|||.++++|++|++...|..+ . .+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-T--PLPAVLGHEGAGVVEAVGSAVTGL 77 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-C--CCCcccccceeEEEEEeCCCcccC
Confidence 6899999999877799999999999999999999999999999999988654 2 468899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceee-ccccccccceeEEeeCCceEEcC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH-HFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~-~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
++||+|++.+. +|+.|.+|..++.++|.+.......|..++|.-.+.+..|.+.+ +....|+|++|+.++.+.++++|
T Consensus 78 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP 156 (365)
T cd08278 78 KPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD 156 (365)
T ss_pred CCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence 99999998764 89999999999999998754322223222221000000000000 01123689999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++++.+++++.|||.++.....++++++|||+|+|++|++++|+|+.+|+++|++++++++|.+.++++|++.++
T Consensus 157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i 236 (365)
T cd08278 157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVI 236 (365)
T ss_pred CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEe
Confidence 99999999999999999999887888999999999998899999999999999997799999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
++++ .++.+.+.+++++++|+++||+|....+..++++++++ |+++.+|.........++...+ .++.++.++..
T Consensus 237 ~~~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (365)
T cd08278 237 NPKE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIE 312 (365)
T ss_pred cCCC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeec
Confidence 8776 67888888888339999999999766689999999999 9999999653333345555555 45888888765
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
......+.+.+++++++++++++..++ ..|+++++++|++.+.++...|++++
T Consensus 313 ~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 313 GDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred CCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 443335677889999999988654445 68999999999999988777798874
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=347.29 Aligned_cols=342 Identities=25% Similarity=0.313 Sum_probs=284.5
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++++++. +.+.+.+.|.+.++||+|||.++++|++|++.+.+..... .+|.++|||++|+|+++|+++++|++
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGE--RHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCC--CCCcccCcceEEEEEEecCCcCccCC
Confidence 78999999986 8899999998999999999999999999999888765443 56889999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP 173 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p~ 173 (390)
||+|++.+..+|++|..|..++++.|.+...+...+... .|+|++|+.++.+ .++++|+
T Consensus 78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~-------------------~g~~~~y~~v~~~~~~~~~lP~ 138 (351)
T cd08285 78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFK-------------------DGVFAEYFHVNDADANLAPLPD 138 (351)
T ss_pred CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCC-------------------CcceeEEEEcchhhCceEECCC
Confidence 999999888899999999999999997643211111111 2589999999974 8999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.++..+.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++++++
T Consensus 139 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~ 217 (351)
T cd08285 139 GLTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVD 217 (351)
T ss_pred CCCHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEec
Confidence 999999999999999999985 7789999999999988999999999999999967999999999999999999999998
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh---hcceeEEee
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI---LKGRSVCGT 329 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~ 329 (390)
+.+ .++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|........+++...+ ....++.+.
T Consensus 218 ~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~ 293 (351)
T cd08285 218 YKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGG 293 (351)
T ss_pred CCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEe
Confidence 876 6788888888776 8999999999877689999999999 9999999655332233332222 234555554
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCCccc-eeeeeccccHHHHHHHHhcCCc--eEEEEec
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNLGEF-ITHEVSFHDINKAFDLLLEGKS--LRCIIWM 386 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~l~~~~~A~~~~~~~~~--~kvvl~~ 386 (390)
.... ..++++++++++.+|++++... +++.|+++++++|++.+.+++. +|+++++
T Consensus 294 ~~~~--~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 294 LCPG--GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred ecCC--ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 3211 2467899999999999888443 4456999999999999988763 5999864
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-45 Score=348.57 Aligned_cols=323 Identities=19% Similarity=0.228 Sum_probs=252.6
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC--CCCCCcccccceeEEEEEeCCCCCc
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--KLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
--|+++++++++ +++++++.|+ ++|||+|||+++|||++|++++.|..... ...+|.++|||++|+|+++|.+ +
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 357899999987 9999999995 99999999999999999999999865321 1257999999999999998874 7
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||||++.+..+|+ |+.| +..+.|.+..+ .|...+ |+|+||+++|++.++++|
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~vP 132 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYD-------------------GFMQDYVFLPPDRLVKLP 132 (341)
T ss_pred cCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCC-------------------CceEEEEEEchHHeEECC
Confidence 9999999998887787 5566 35677865433 122222 489999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHH--HhCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEecCChhhHHHHHhcCCc
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~--~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
+++++++|+.+ .++++||+++.. .+.+++|++|||+|+|++|++++|+++. +|..+|++++++++|++++++++.+
T Consensus 133 ~~l~~~~aa~~-~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFT-ELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhh-chHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 99999987755 478999998754 3457899999999999999999999986 6655899999999999999876654
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccC---hHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcce
Q 016363 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGR 324 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~ 324 (390)
..++ + +..+ ++|+|||++|+ +.++..+++.++++ |+++.+|.... ..+++...+ .+++
T Consensus 212 ~~~~-------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~ 274 (341)
T cd08237 212 YLID-------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEY--PVPINTRMVLEKGL 274 (341)
T ss_pred eehh-------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCC--CcccCHHHHhhCce
Confidence 3221 1 1123 79999999994 45688999999999 99999996532 234444444 4589
Q ss_pred eEEeeecCCCCchhhHHHHHHHHHcC---CCCCccceeeeeccc---cHHHHHHHHhcCCceEEEEecC
Q 016363 325 SVCGTYFGGLKPRSDIATLAQKYLDK---ELNLGEFITHEVSFH---DINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~l~---~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
++.|+..+. .++++++++++.++ +.++.++++++|+++ ++.+|++.+.++..+|+|+.++
T Consensus 275 ~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 275 TLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred EEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 999986432 46789999999999 446778899999986 5555555554444459999875
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=339.79 Aligned_cols=334 Identities=22% Similarity=0.377 Sum_probs=279.5
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++. +++.+++.|+|+++|++||+.++++|++|++.+.|..+.. .+|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA--KYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC--CCCcccccceEEEEEEECCCCccCCC
Confidence 68999999886 9999999999999999999999999999999998876544 57899999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+..+|+.|.+|.++++++|.++.. .++..+ |+|++|+.++.+.++++|+++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~ 135 (339)
T PRK10083 78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRD-------------------GGFSEYAVVPAKNAHRIPDAI 135 (339)
T ss_pred CCEEEEccccCCCCCccccCcCcccCCCCce---EEEccC-------------------CcceeeEEechHHeEECcCCC
Confidence 9999999999999999999999999976543 122222 589999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++.+++ +..++.++|. +.+..++++|++|+|+|+|++|++++|+|+. +|+..|+++++++++.++++++|+++++++
T Consensus 136 ~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~ 213 (339)
T PRK10083 136 ADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINN 213 (339)
T ss_pred CHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 998876 4567888885 5578899999999999999999999999996 699668889999999999999999999987
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFG 332 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 332 (390)
++ .++.+.+.. .+ ++|++||++|+...+..++++++++ |+++.+|.... ...+....+. +++++.+...
T Consensus 214 ~~---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~- 284 (339)
T PRK10083 214 AQ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL- 284 (339)
T ss_pred cc---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec-
Confidence 65 566666643 23 6789999999876689999999999 99999996542 2223333333 4677776643
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC-c-eEEEEecCC
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRCIIWMDK 388 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~kvvl~~~~ 388 (390)
..+.+++++++++++++++..+++++|+++++++|++.+.++. . .|+++.+.+
T Consensus 285 ---~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 ---NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred ---ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 2467899999999998887666779999999999999987543 3 499998764
|
|
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=339.81 Aligned_cols=360 Identities=39% Similarity=0.680 Sum_probs=295.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++.++++.+++.|++++++|+|+|.++++|+.|+..+.|..+ . .+|.++|+|++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~--~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-A--PLPAVLGHEGAGVVEEVGPGVTGVKP 77 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-C--CCCccccccceEEEEEeCCCccccCC
Confidence 79999999988899999999999999999999999999999998888654 2 46789999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+..+|++|.+|++++.+.|.+.... ..|...++..+... .|...+.....|+|++|+.++.+.++++|+++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 155 (363)
T cd08279 78 GDHVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFTA-DGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI 155 (363)
T ss_pred CCEEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCcccccc-cCccccccccCccceeeEEeccccEEECCCCC
Confidence 99999999999999999999999999764210 01111111101100 12222222234789999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+++++.|||.++....+++++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++++++.+
T Consensus 156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~ 235 (363)
T cd08279 156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS 235 (363)
T ss_pred ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence 99999999999999999988889999999999997799999999999999995599999999999999999999999877
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGG 333 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 333 (390)
. .++...+.+++++ ++|++||++++...+..++++++++ |+++.+|.........++...+. .+..+.++.++.
T Consensus 236 ~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (363)
T cd08279 236 E---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS 311 (363)
T ss_pred C---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence 6 6788888888766 8999999999766689999999999 99999986543234455555555 367777776654
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEE
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 384 (390)
....+.+++++++++++++++...+.++|+++++++|++.+.+++..|.|+
T Consensus 312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 445678999999999998887655778999999999999998887666554
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-44 Score=348.49 Aligned_cols=335 Identities=21% Similarity=0.244 Sum_probs=266.7
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeeccccccccc-ccCCCC----CCCCCCcccccceeEEEEEeCC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDL----PKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~~----~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
|.||++++++++. +++.++|.|+|+++||+|||.++|||++|++.+ .|.... ....+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5689999999986 999999999999999999999999999999976 453211 0014788999999999999999
Q ss_pred CCC-cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC-
Q 016363 89 YVE-EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT- 166 (390)
Q Consensus 89 ~v~-~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 166 (390)
+|+ .|++||||++.+...|+.|.+|.. .|...+ |+|+||++++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~-------------------G~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYP-------------------GGLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCC-------------------CcceEEEEecHHh
Confidence 998 599999999988888998887721 122222 489999999987
Q ss_pred ---ceEEcCCCCCcchhhcc-ccc-hhhHHHHH--------HHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeE
Q 016363 167 ---HVVKITPHIPLGIACLL-SCG-VSTGVGAA--------WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNR--ASKI 230 (390)
Q Consensus 167 ---~v~~~p~~~~~~~aa~~-~~~-~~tA~~~l--------~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g--~~~V 230 (390)
.++++|+++++++++.+ +.. ..++|.++ .+..++++|++|+|+|+ |++|++++|+|+.+| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 68999999999998865 211 12233332 24578999999999986 999999999999975 4579
Q ss_pred EEecCChhhHHHHHhc--------CCc-EEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCce
Q 016363 231 IGVDINPEKFEIGKKF--------GIT-DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGK 300 (390)
Q Consensus 231 i~~~~~~~~~~~~~~~--------g~~-~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~ 300 (390)
++++++++|++.++++ |++ .++++.+ ..++.+.+++++++ ++|++||++|....++.++++++++ |+
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~ 283 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GC 283 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-Ce
Confidence 9999999999999997 666 4666542 14688888888887 9999999999877789999999998 88
Q ss_pred EEEEcccC-CCCCcccchHhhhc-ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC
Q 016363 301 TVILGVEM-HGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 378 (390)
Q Consensus 301 ~v~~g~~~-~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~ 378 (390)
++.++... .....+++...+.. ++++.|+..+. .++++++++++++|++++.++++++|+|+++++|++.+..+.
T Consensus 284 ~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~ 360 (410)
T cd08238 284 LNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIP 360 (410)
T ss_pred EEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccC
Confidence 77665332 11123455544444 88999986433 467999999999999999889999999999999999998443
Q ss_pred ceEEEEecCC
Q 016363 379 SLRCIIWMDK 388 (390)
Q Consensus 379 ~~kvvl~~~~ 388 (390)
.+|+++.++.
T Consensus 361 ~gKvvl~~~~ 370 (410)
T cd08238 361 GGKKLIYTQK 370 (410)
T ss_pred CceEEEECCC
Confidence 4599998754
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=336.32 Aligned_cols=330 Identities=23% Similarity=0.392 Sum_probs=281.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||++++++++++++.+.+.|+++++||+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++|+++++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~vG~~v~~~~~ 78 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL--SYPRVPGHEVVGRIDAVGEGVSRWKV 78 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC--CCCcccCcceeEEEEEECCCCccCCC
Confidence 7999999996669999999999999999999999999999999988865433 56889999999999999999999999
Q ss_pred CCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 96 RDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 96 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
||+|++.+ ...|++|.+|..++++.|..... .|+..+ |++++|+.++.+.++++|++
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~-------------------g~~a~~~~v~~~~~~~lp~~ 136 (333)
T cd08296 79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRD-------------------GGYAEYMLAPAEALARIPDD 136 (333)
T ss_pred CCEEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccC-------------------CcceeEEEEchhheEeCCCC
Confidence 99998744 46899999999999999987543 233222 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++.+++.+++++.|||+++ +...++++++|||+|+|++|++++++|+.+|+ +|+++++++++.+.++++|+++++++
T Consensus 137 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~ 214 (333)
T cd08296 137 LDAAEAAPLLCAGVTTFNAL-RNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDT 214 (333)
T ss_pred CCHHHhhhhhhhhHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecC
Confidence 99999999999999999988 45599999999999999999999999999999 89999999999999999999999987
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 333 (390)
.. .++.+.+.++ +++|++||++|....+..++++++++ |+++.+|... ...+++...+ .+++++.++..+.
T Consensus 215 ~~---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~ 286 (333)
T cd08296 215 SK---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT 286 (333)
T ss_pred CC---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC
Confidence 66 5677777665 37999999998666689999999999 9999999654 2344544433 4499999986433
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
..++..+++++++++++. .+ +.|+++++.+||+.+.+++.. |+|++
T Consensus 287 ---~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ---ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred ---HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 467888999998887654 35 689999999999999988775 99874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=336.09 Aligned_cols=336 Identities=27% Similarity=0.423 Sum_probs=280.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-------CCCCCCcccccceeEEEEEeCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------PKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-------~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
|||+++++++. +++.+.+.|++.+++|+||+.++++|+.|+..+.|.... ....+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999999876 999999999999999999999999999999988875311 0014677899999999999999
Q ss_pred CCC--cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC
Q 016363 89 YVE--EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 166 (390)
Q Consensus 89 ~v~--~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 166 (390)
.++ .|++||+|++.+..+|+.|.+|..+..+.|..... .|+... ..|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~-----------------~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNN-----------------VNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccC-----------------CCCcceeeEEcccc
Confidence 999 89999999999999999999999999999975422 222110 12589999999988
Q ss_pred -ceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 167 -HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 167 -~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
.++++|+++++++++.+ .+++|+|+++ +..++++|++|+|.|+|.+|++++++|+.+|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999988 7899999987 88899999999997779999999999999998678899999999999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh--hc
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI--LK 322 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~--~~ 322 (390)
+|++.+++... .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|..... .++....+ .+
T Consensus 218 ~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~ 291 (350)
T cd08256 218 FGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP--VTVDWSIIGDRK 291 (350)
T ss_pred cCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC--CccChhHhhccc
Confidence 99999988765 6788888888877 8999999999766688899999999 999999854322 22333322 33
Q ss_pred ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 323 GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
++++.++.... ..+.+++++++++.+++..++.+.|+++++.+|++.++++... |+++
T Consensus 292 ~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 292 ELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred ccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 67777765443 4688899999999888765567999999999999999887765 8774
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=333.60 Aligned_cols=341 Identities=30% Similarity=0.437 Sum_probs=285.4
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++.+++. +.+.+.|.|.| .+++|+|||.++++|+.|++.+.|..+.. ++|.++|+|++|+|+++|++++.|+
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGA--KHGMILGHEFVGEVVEVGSDVKRLK 77 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCC--CCCceeccceEEEEEEECCCccccC
Confidence 68999998877 89999999999 89999999999999999999998877654 6789999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|++.+..+|+.|.+|..+....|.+.......+.. ..|+|++|++++.+ .++++|
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~g~~~~~~~v~~~~~~~~~lP 138 (347)
T cd05278 78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR-------------------IDGGQAEYVRVPYADMNLAKIP 138 (347)
T ss_pred CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccC-------------------CCCeeeEEEEecchhCeEEECC
Confidence 999999999999999999999999999874322101111 12589999999987 899999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++++.+++++.|||+++ ...+++++++|||.|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|++.++
T Consensus 139 ~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi 217 (347)
T cd05278 139 DGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDII 217 (347)
T ss_pred CCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEE
Confidence 9999999999999999999987 778899999999987899999999999999965789998889999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (390)
++++ .++.+.+++++++ ++|++||++++...+..++++|+++ |+++.+|..............+.++..+.+...
T Consensus 218 ~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
T cd05278 218 NPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLV 293 (347)
T ss_pred cCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeecc
Confidence 8776 5688888888776 8999999999855589999999999 999999854332111122222345777776543
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-e-EEEEec
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-L-RCIIWM 386 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-kvvl~~ 386 (390)
.. .+.+++++++++++++.+...+...|+++++++|++.+..++. . |+++++
T Consensus 294 ~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 294 PV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred Cc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 22 4678899999999988865556688999999999999887765 4 888763
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=331.86 Aligned_cols=334 Identities=28% Similarity=0.425 Sum_probs=286.3
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++.+++.++++.+.+.|++++++++||+.++++|++|+....|.... ....+|.++|+|++|+|+++|++++.|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 689999998777999999999999999999999999999999998876542 2125788999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++.++|.+... .|...+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTD-------------------GGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCC-------------------CcceeeEEecHHHeEECCCC
Confidence 99999999999999999999999999987654 233333 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+| . +|+++++++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999998666 46889999999999779999999999999 6 899999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 330 (390)
+++. . +.+.+++++++ ++|+++|++|+......++++++++ |+++.+|.... .+++... +.+++++.++.
T Consensus 218 ~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~ 289 (340)
T cd05284 218 NASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSL 289 (340)
T ss_pred cCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEe
Confidence 8876 4 88888888877 8999999999866689999999999 99999986542 2333333 44588888875
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
... .+.+.+++++++++.+++ .+ +.|+++++++|++.+.+++.. |+++.+
T Consensus 290 ~~~---~~~~~~~~~~l~~g~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 290 WGT---RAELVEVVALAESGKVKV--EI-TKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ccc---HHHHHHHHHHHHhCCCCc--ce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 432 567889999999998764 24 679999999999999887765 888754
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=335.71 Aligned_cols=353 Identities=26% Similarity=0.370 Sum_probs=286.2
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++++++. +++.+.+.|.| ++++|+||+.++++|++|+..+.|..+.. ++|.++|||++|+|+++|+++++|+
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM--KKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC--CCCccccccceEEEEEeCCCCCCCC
Confidence 78999998866 99999999988 49999999999999999999998876554 5788999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCC----CCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ce
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HV 168 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v 168 (390)
+||+|++.+..+|++|.+|..++.+.|.++.... ..|....+..++ ++ .. ....|+|++|+.++.+ .+
T Consensus 78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~-~~~~g~~~~~~~v~~~~~~~ 151 (386)
T cd08283 78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGY----SH-LT-GGYAGGQAEYVRVPFADVGP 151 (386)
T ss_pred CCCEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccccccc----cc-cc-CCCCCeeEEEEEcccccCeE
Confidence 9999999998899999999999999998754321 000000000000 00 00 0013689999999988 89
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~ 248 (390)
+++|+++++++++.+++.++|||+++ +..++++|++|||+|+|.+|++++++|+..|+.+|+++++++++.+.+++++.
T Consensus 152 ~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~ 230 (386)
T cd08283 152 FKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLG 230 (386)
T ss_pred EECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence 99999999999999999999999998 88899999999999889999999999999998569999999999999999844
Q ss_pred cEEEcCCCCCCc-CHHHHHHhhcCC-CccEEEEcccCh---------------------HHHHHHHHHhccCCceEEEEc
Q 016363 249 TDFINPATCGDK-TVSQVIKEMTDG-GADYCFECIGLT---------------------SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 249 ~~v~~~~~~~~~-~~~~~i~~~~~~-g~D~vid~~g~~---------------------~~~~~~~~~l~~~~G~~v~~g 305 (390)
..++++.. . ++.+.+.+++++ ++|+|||++|+. ..+..++++++++ |+++.+|
T Consensus 231 ~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g 306 (386)
T cd08283 231 AETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIG 306 (386)
T ss_pred cEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEc
Confidence 46777655 4 488888888887 899999999853 3478899999999 9999998
Q ss_pred ccCCCCCcccch-HhhhcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC-c-eEE
Q 016363 306 VEMHGSPISLNS-IEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRC 382 (390)
Q Consensus 306 ~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~kv 382 (390)
..... ...++. ..+.++.++.+.... ..+.+.+++++++++++.+..++++.|+++++.+|++.+.++. . +|+
T Consensus 307 ~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~ 382 (386)
T cd08283 307 VYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKV 382 (386)
T ss_pred CCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEE
Confidence 65432 223343 234458888887532 2567899999999999887666778999999999999988765 3 499
Q ss_pred EEec
Q 016363 383 IIWM 386 (390)
Q Consensus 383 vl~~ 386 (390)
++++
T Consensus 383 ~~~~ 386 (386)
T cd08283 383 VLKP 386 (386)
T ss_pred EecC
Confidence 9863
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-42 Score=329.28 Aligned_cols=337 Identities=29% Similarity=0.408 Sum_probs=286.3
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++.+++. +++.+.+.|+| .++||+|||+++++|+.|+..+.|..+.. ++|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV--TPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC--CCCceecccceEEEEEeccCccccC
Confidence 68999999887 99999999986 89999999999999999999998876554 5688999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|++.+..+|+.|.+|..+.++.|...... .|...+ |+|++|+.++.+ .++++|
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~~~lp 136 (345)
T cd08286 78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLID-------------------GTQAEYVRIPHADNSLYKLP 136 (345)
T ss_pred CCCEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccC-------------------CeeeeEEEcccccCceEECC
Confidence 999999999999999999999999999753221 122222 489999999987 899999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++.+++.+++.++|||+++....++++|++|||.|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.++
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v 216 (345)
T cd08286 137 EGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTV 216 (345)
T ss_pred CCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCcee
Confidence 99999999999999999999777788999999999998899999999999999944899999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 330 (390)
++.+ .++...+.+++++ ++|++|||+|....+..+++.++++ |+++.+|.... ...+++.. +.+++++.+..
T Consensus 217 ~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08286 217 NSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGL 290 (345)
T ss_pred cccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeec
Confidence 8876 5777888888777 8999999999876688999999999 99999986532 23444544 44588887753
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcC---CceEEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG---KSLRCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~---~~~kvvl~~ 386 (390)
.. .+.+..++++++++.+++.++++++|+++++++|++.+... ...|++|++
T Consensus 291 ~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 291 VD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred Cc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 22 24688899999999888776677999999999999998875 235999864
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=326.48 Aligned_cols=339 Identities=25% Similarity=0.410 Sum_probs=288.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++.++++.+.+.|.+.+++++||+.++++|+.|+..+.|..+.. .+|.++|+|++|+|+.+|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV--TLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCC--CCCeeeccceeEEEEEECCCCccCCC
Confidence 7999999988889999999999999999999999999999999988876544 56889999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP 173 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p~ 173 (390)
||+|+..+..+|++|.+|..++.+.|..... .++..+ |+|++|+.++.. .++++|+
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~~iP~ 136 (345)
T cd08260 79 GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHP-------------------GSFAEYVAVPRADVNLVRLPD 136 (345)
T ss_pred CCEEEECCCCCCCCCccccCcCcccCCCCcc---cccCCC-------------------CcceeEEEcccccCceEECCC
Confidence 9999987778999999999999999987532 233222 489999999974 8999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.+++++.|||+++.+..++.++++|+|+|+|++|++++++|+.+|+ +|+++++++++.+.++++|++.+++
T Consensus 137 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~ 215 (345)
T cd08260 137 DVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN 215 (345)
T ss_pred CCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEc
Confidence 999999999999999999998788899999999999999999999999999999 8999999999999999999999987
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC-cccchHhh-hcceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP-ISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~ 331 (390)
.++ ..++.+.+.++.++++|++||++|+.......+++++++ |+++.+|....... ..++...+ .++.++.+...
T Consensus 216 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08260 216 ASE--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG 292 (345)
T ss_pred ccc--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc
Confidence 653 136777787776668999999999766688999999999 99999996543322 34444444 44788888754
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
. ..+.+++++++++++++.+...+.+.++++++++|++.+.++... |+|++
T Consensus 293 ~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 293 M---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred C---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 3 256788999999999888765567899999999999999887665 87763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=325.81 Aligned_cols=304 Identities=17% Similarity=0.244 Sum_probs=240.7
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecc-cccccccccCCCCCC-CCCCcccccceeEEEEEeCCCCCc
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLC-HSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
+||++++.+++. +++.+.+.|+|++|||+|||++++|| ++|++.++|..+... ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999998876 99999999999999999999999996 699998888754321 2579999999999999999998 6
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||||+.. |..|.+|.. | . .|+|+||+++|++.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~--~-------------------~G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G--L-------------------FGGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c--c-------------------CCcccceEEcCHHHceeCC
Confidence 9999999873 223333211 0 0 1589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++++. +.++ ...|||+++.+ . ..++++|||+|+|++|++++|+|+.+|++.|++++.++++++.+..+ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9999854 4454 57899998743 3 34689999999999999999999999996677788887777666543 344
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 331 (390)
++.+ . .++++|+||||+|+...++.++++++++ |+++.+|..... .+++... +.+++++.++..
T Consensus 192 ~~~~----~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~~~~~ 256 (308)
T TIGR01202 192 DPEK----D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEP--VNFDFVPAFMKEARLRIAAE 256 (308)
T ss_pred Chhh----c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCC--cccccchhhhcceEEEEecc
Confidence 4332 1 1238999999999987789999999999 999999975432 3333333 345788887754
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-eEEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~ 385 (390)
.. .+++++++++++++++++.++++++|+|+++++|++.+.++.. +|++++
T Consensus 257 ~~---~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 257 WQ---PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cc---hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 32 4679999999999999998889999999999999998776544 599874
|
|
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=326.89 Aligned_cols=338 Identities=28% Similarity=0.416 Sum_probs=283.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC----------CCCCCCcccccceeEEEEE
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL----------PKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~~~~p~~~G~e~~G~V~~ 85 (390)
|||+++..++.++++.+.|.|+++++||+||+.++++|++|++.+.|..+. ...++|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 789999998888999999999999999999999999999999998875431 0114577899999999999
Q ss_pred eCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
+|++++++++||+|++.+...|++|.+|.+++++.|.+... .|... .|+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQ-------------------DGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeec-------------------cCcceeeEEecH
Confidence 99999999999999999999999999999999999966432 11111 258999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
+.++++|+++++.+++.+++.+.|||+++.....++++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999998776667789999999889999999999999999789999999999999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhccee
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 325 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 325 (390)
+|++.+++.++ .++.+.+.+..++++|++||++|....+..++++|+++ |+++.+|.........+.. ..+++.+
T Consensus 219 ~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~-~~~~~~~ 293 (350)
T cd08240 219 AGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPL-LPLRALT 293 (350)
T ss_pred hCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHH-HhhcCcE
Confidence 99988888765 56777777776668999999999766689999999999 9999998654332223322 2335778
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+.++.... .+++.+++++++++.+++. ....|+++++++|++.+.++... |+++.
T Consensus 294 i~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 294 IQGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 87775443 3678899999999987653 45789999999999999877665 88875
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=327.36 Aligned_cols=360 Identities=32% Similarity=0.523 Sum_probs=291.0
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc---
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE--- 92 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 92 (390)
|||+++.+++.++++.+.|+|.+.++||+|++.++++|++|+..+.+..+. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF---PPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC---CCCcccccccceEEEEeCCCCCCCCc
Confidence 689999998777999999999999999999999999999999988876542 46789999999999999999988
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCC-CCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~-~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
|++||+|++.+..+|+.|.+|..+.+++|.+..+ .+..|...+|--.+....+...+. ...|+|++|+.++.+.++++
T Consensus 78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 78 LSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccc-ccCCcceeEEEechhhEEEC
Confidence 9999999999999999999999999999987531 111110111100000000000000 11368999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
|+++++.+++.+++.++|||+++.....+.++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++.+
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v 236 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT 236 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence 99999999999999999999998788888999999999879999999999999999459999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 329 (390)
++.++ .++.+.++++.++ ++|+|||++++....+.++++++++ |+++.+|.........++...+ .++.++.++
T Consensus 237 ~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (367)
T cd08263 237 VNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGS 312 (367)
T ss_pred ecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence 98876 6788888888776 8999999999874488999999999 9999998654332334444445 458887775
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
.... .++.++.++++++++++++...+++.|+++++.+|++.+.++... |+|++
T Consensus 313 ~~~~--~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 313 YGAR--PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCCC--cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 3222 246788999999999888766577899999999999999887765 88874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=329.50 Aligned_cols=348 Identities=18% Similarity=0.186 Sum_probs=281.5
Q ss_pred CCCCCccceeeEEEeec--CCC---CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC--------CCCCCc
Q 016363 7 SPKAGKVIRCKAAICRI--PGK---PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--------KLPLPV 73 (390)
Q Consensus 7 ~~~~~~~~t~~a~~~~~--~~~---~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~--------~~~~p~ 73 (390)
.|....|.+|||++++. ++. .+++.+.|.|+++++||+|||.++++|++|++.+.+..... ....+.
T Consensus 4 ~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~ 83 (393)
T cd08246 4 PPLGVVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH 83 (393)
T ss_pred CCCCcCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcc
Confidence 35556899999999863 332 37888999999999999999999999999998877652100 001235
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccc
Q 016363 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 153 (390)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 153 (390)
++|||++|+|+++|++++.|++||+|++.+...|+.|..|..+..+.|..... +|+.. .
T Consensus 84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~------------------~ 142 (393)
T cd08246 84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYET------------------N 142 (393)
T ss_pred ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccC------------------C
Confidence 88999999999999999999999999999999999999999999999975432 23221 1
Q ss_pred ccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHH--hCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeE
Q 016363 154 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKI 230 (390)
Q Consensus 154 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~--~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~V 230 (390)
.|+|++|+.++...++++|+++++++++.++++++|||+++... +++++|++|+|+|+ |++|++++++|+.+|+ ++
T Consensus 143 ~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~v 221 (393)
T cd08246 143 YGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NP 221 (393)
T ss_pred CCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eE
Confidence 25899999999999999999999999999999999999988654 68999999999998 9999999999999999 88
Q ss_pred EEecCChhhHHHHHhcCCcEEEcCCCCC-------------------CcCHHHHHHhhcCC--CccEEEEcccChHHHHH
Q 016363 231 IGVDINPEKFEIGKKFGITDFINPATCG-------------------DKTVSQVIKEMTDG--GADYCFECIGLTSVMND 289 (390)
Q Consensus 231 i~~~~~~~~~~~~~~~g~~~v~~~~~~~-------------------~~~~~~~i~~~~~~--g~D~vid~~g~~~~~~~ 289 (390)
+++++++++.+.++++|+++++++++.+ ...+.+.+.+++++ ++|++||++|+.. +..
T Consensus 222 v~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~ 300 (393)
T cd08246 222 VAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPT 300 (393)
T ss_pred EEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHH
Confidence 8899999999999999999999864310 01356778888776 7999999999854 889
Q ss_pred HHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHH
Q 016363 290 AFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDIN 368 (390)
Q Consensus 290 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 368 (390)
++++++++ |+++.+|..... ..+++...+ .++.++.++.... .+++.+++++++++.+.+ .++++|++++++
T Consensus 301 ~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~ 373 (393)
T cd08246 301 SVFVCDRG-GMVVICAGTTGY-NHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETP 373 (393)
T ss_pred HHHHhccC-CEEEEEcccCCC-CCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHH
Confidence 99999999 999999864322 123333333 3477888875543 457888999999997764 367899999999
Q ss_pred HHHHHHhcC-Cce-EEEE
Q 016363 369 KAFDLLLEG-KSL-RCII 384 (390)
Q Consensus 369 ~A~~~~~~~-~~~-kvvl 384 (390)
+|++.+.++ ... |+++
T Consensus 374 ~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 374 DAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred HHHHHHHhCccccceEEE
Confidence 999999877 554 8776
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=320.28 Aligned_cols=335 Identities=27% Similarity=0.411 Sum_probs=280.2
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++++++. +++.+.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT---RAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC---CCCcccccceEEEEEEeCCCCCccC
Confidence 68999998876 99999999986 8999999999999999999998886542 3578999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|++....+|+.|.+|..++.+.|....+ .+...+ |+|++|+.++.+ .++++|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~~lP 134 (345)
T cd08287 77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVD-------------------GGQGEYVRVPLADGTLVKVP 134 (345)
T ss_pred CCCEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCC-------------------CceEEEEEcchhhCceEECC
Confidence 99999986677899999999999999986443 222233 489999999975 999999
Q ss_pred CCCCcchhh-----ccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 173 PHIPLGIAC-----LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 173 ~~~~~~~aa-----~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
+++++..+. .+...++|||+++ ..+++++|++|+|.|+|++|++++|+|+.+|++.++++++++++.++++++|
T Consensus 135 ~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g 213 (345)
T cd08287 135 GSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFG 213 (345)
T ss_pred CCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence 999882221 2235788999987 5789999999999888999999999999999966999998988999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch-Hhhhccee
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRS 325 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~ 325 (390)
++.++++.. .++.+.+.+++++ ++|+++|++|+...+..++++++++ |+++.+|.... ...++. ..+.++.+
T Consensus 214 a~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~ 287 (345)
T cd08287 214 ATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVG 287 (345)
T ss_pred CceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceE
Confidence 999998876 6788888888877 9999999999877789999999999 99999986542 234444 33555888
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
+.+.... ..+.+.+++++++++++++..+++++++++++++|++.+.+....|++|++
T Consensus 288 ~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 288 LAGGPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred EEEecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 8775322 246789999999999888766567999999999999998877666999863
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=319.81 Aligned_cols=338 Identities=27% Similarity=0.381 Sum_probs=278.4
Q ss_pred eeEEEeecCCCCcEEEEeecCCCC-CCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++..++. +++.+.++|+|. ++||+|++.++++|+.|+....|..+ . .+|.++|+|++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~--~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (344)
T cd08284 1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-S--TPGFVLGHEFVGEVVEVGPEVRTLK 76 (344)
T ss_pred CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-C--CCCcccccceEEEEEeeCCCccccC
Confidence 68899988754 999999999875 99999999999999999998888654 2 4578899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|++.+..+|++|.+|..+..+.|++.... |.. + .....|+|++|+.++++ .++++|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~-------------~~~~~g~~~~~~~v~~~~~~~~~~p 138 (344)
T cd08284 77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLF---GYA--G-------------SPNLDGAQAEYVRVPFADGTLLKLP 138 (344)
T ss_pred CCCEEEEcccCCCCCChHHhCcCcccCCCCccc---ccc--c-------------cCCCCCceeEEEEcccccCceEECC
Confidence 999999999899999999999999999764321 110 0 00112589999999875 999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++++.++++++|||+++. ..++++|++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|+. .+
T Consensus 139 ~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~ 216 (344)
T cd08284 139 DGLSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PI 216 (344)
T ss_pred CCCCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EE
Confidence 99999999999999999999884 58899999999998899999999999999975799998889999999999975 45
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH-hhhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~ 330 (390)
+.+. .++...+.+++++ ++|++||++++...+..++++++++ |+++.+|..... ....... .+.++.++.+..
T Consensus 217 ~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 291 (344)
T cd08284 217 NFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR 291 (344)
T ss_pred ecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec
Confidence 5544 5688888888876 9999999999876689999999999 999999965422 2222333 244477776542
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
....+.+.+++++++++++++.++++++|+++++++|++.+.++...|+|++
T Consensus 292 ---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 292 ---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred ---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 1235678999999999988876556789999999999999887655788875
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=320.05 Aligned_cols=339 Identities=27% Similarity=0.410 Sum_probs=275.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++.++++.+++.+.|.|+|+++|++||++++++|++|+.++.+... .....+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 68999999887799999999999999999999999999999998765321 11124678899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++.++|..... .+...+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRP-------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCC-------------------CcceeeEEechHHeEECcCC
Confidence 99999999999999999999999999976422 222222 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++.+++.+ ..+.++++++.. ...+|++|+|.|+|++|++++|+|+.+|+++|+++++++++.+.++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888754 466777665532 35689999998889999999999999998668888889999999999999999987
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
++ .++.+.+++++.+ ++|+||||+|+...++.++++++++ |+++.+|........++ ...+.++.++.++....
T Consensus 216 ~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 290 (341)
T PRK05396 216 AK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGRE 290 (341)
T ss_pred cc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccC
Confidence 76 6788888888876 9999999999877789999999999 99999986543222222 22233477777764221
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecC
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
..+.+..++++++++ +.+.+.+.+.|+++++++|++.+.++..+|++++++
T Consensus 291 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 291 --MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred --ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 124466788899888 545555779999999999999988776459999764
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-41 Score=319.41 Aligned_cols=310 Identities=19% Similarity=0.223 Sum_probs=256.1
Q ss_pred eeEEEeecCCCC-----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 16 CKAAICRIPGKP-----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 16 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
|||+++.+++.+ +++.+.|.|.|+++||+||+.++++|++|++.+.|..+.. ..+|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~-~~~p~v~G~e~~G~V~~vG~~v 79 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGST-KALPVPPGFEGSGTVVAAGGGP 79 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC-CCCCcCCCcceEEEEEEECCCc
Confidence 689999998853 7888889999999999999999999999999998865432 1578999999999999999999
Q ss_pred Cc-CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceE
Q 016363 91 EE-VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (390)
Q Consensus 91 ~~-~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 169 (390)
++ |++||+|++... .+ |+|++|+.++++.++
T Consensus 80 ~~~~~vGd~V~~~~~-----------------------------~~-------------------g~~a~~~~v~~~~~~ 111 (324)
T cd08291 80 LAQSLIGKRVAFLAG-----------------------------SY-------------------GTYAEYAVADAQQCL 111 (324)
T ss_pred cccCCCCCEEEecCC-----------------------------CC-------------------CcchheeeecHHHeE
Confidence 96 999999986421 01 489999999999999
Q ss_pred EcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE-cC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF-GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 170 ~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~-Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
++|+++++++++++++..+|||.. ....++ ++++++|+ |+ |++|++++|+|+.+|+ +|+++++++++.++++++|
T Consensus 112 ~iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g 188 (324)
T cd08291 112 PLPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIG 188 (324)
T ss_pred ECCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcC
Confidence 999999999999888889999854 455665 56666665 55 9999999999999999 8999999999999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhccee
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRS 325 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~ 325 (390)
+++++++++ .++.+.+++++++ ++|++||++|+.. ....+++++++ |+++.+|.........++... +.++++
T Consensus 189 ~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 263 (324)
T cd08291 189 AEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKS 263 (324)
T ss_pred CcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcE
Confidence 999998876 6898999998887 9999999999877 67789999999 999999965433221243333 445888
Q ss_pred EEeeecCCCC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 326 VCGTYFGGLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 326 i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+.++....+. ..+++++++++++ +++ ++.++++|+|+++.+|++.+.++... |+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 264 IEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 8888765432 2456888888887 654 45688999999999999999887664 99873
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=316.22 Aligned_cols=333 Identities=30% Similarity=0.516 Sum_probs=281.3
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++++++. +++.+++.|++.++|++|+|.++++|+.|+....+..+.. .+|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA--SYPRILGHELSGEVVEVGEGVAGLKV 77 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC--CCCcccccccEEEEEEeCCCCCCCCC
Confidence 68999998876 8999999999999999999999999999999988876554 56789999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|+..+..+|+.|..|..++.+.|.+.+. .++.. .|+|++|+.++++ ++++|+++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~g~~~~~v~v~~~-~~~~p~~~ 134 (337)
T cd08261 78 GDRVVVDPYISCGECYACRKGRPNCCENLQV---LGVHR-------------------DGGFAEYIVVPAD-ALLVPEGL 134 (337)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCe---eeecC-------------------CCcceeEEEechh-eEECCCCC
Confidence 9999998888999999999999999954321 12211 2589999999999 99999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+ ..+.++++.+ ...++++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++.++++++|+++++++.
T Consensus 135 ~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~ 211 (337)
T cd08261 135 SLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG 211 (337)
T ss_pred CHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc
Confidence 99999877 5788888876 78899999999999889999999999999999 899999999999999999999999887
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG 333 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 333 (390)
+ .++.+.+.+++++ ++|++||++|+...+..++++|+++ |+++.+|.... ...++...+.. ++++.+..
T Consensus 212 ~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~--- 282 (337)
T cd08261 212 D---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKG--PVTFPDPEFHKKELTILGSR--- 282 (337)
T ss_pred c---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCC--CCccCHHHHHhCCCEEEEec---
Confidence 6 6788888888877 8999999998866689999999999 99999986542 22333433443 67777653
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC-ce-EEEEec
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-SL-RCIIWM 386 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~-kvvl~~ 386 (390)
....+.+++++++++++.+++.+.+...++++++.+|++.+.+++ .. |+|+++
T Consensus 283 ~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 283 NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 223567889999999998887434668999999999999998873 54 999864
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=321.85 Aligned_cols=346 Identities=26% Similarity=0.379 Sum_probs=277.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++.+++. ++++++|+|.+ +++|++|||+++++|++|++.+.|..+ . .+|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~--~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-A--EPGLVLGHEAMGEVEEVGSAVESLK 76 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-C--CCCceeccccEEEEEEeCCCCCcCC
Confidence 68899988874 99999999985 799999999999999999999988665 2 4688999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|+..+..+|+.|..|..++.+.|.+....+..+ ..+. ++ . ....|+|++|+.++.+ .++++|
T Consensus 77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~--~~~~------~~--~--~~~~g~~a~y~~v~~~~~~~~~lP 144 (375)
T cd08282 77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGG--AYGY------VD--M--GPYGGGQAEYLRVPYADFNLLKLP 144 (375)
T ss_pred CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccc--cccc------cc--c--CCCCCeeeeEEEeecccCcEEECC
Confidence 9999999999999999999999999997643221000 0000 00 0 0012689999999976 899999
Q ss_pred CCCCcc---hhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 173 PHIPLG---IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 173 ~~~~~~---~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
+++++. +++.++++++|||+++ ..+++++|++|+|.|+|++|++++|+|+++|+.+|+++++++++.+.++++|+.
T Consensus 145 ~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 223 (375)
T cd08282 145 DRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI 223 (375)
T ss_pred CCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe
Confidence 999998 5677888899999988 888999999999988899999999999999976799999999999999999984
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH-----------HHHHHHHHhccCCceEEEEcccCCC--------
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS-----------VMNDAFNSSREGWGKTVILGVEMHG-------- 310 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~-------- 310 (390)
.+++.+ .++.+.+.+++++++|++|||+|... ++..++++++++ |+++.+|.....
T Consensus 224 -~v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~ 298 (375)
T cd08282 224 -PIDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAA 298 (375)
T ss_pred -EeccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccc
Confidence 566655 67888888877668999999999763 478899999999 999888854311
Q ss_pred ---CCcccchHhhhc-ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 311 ---SPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 311 ---~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
....++...+.. +..+.+.... ..+.+..++++++++++++..++++.|+++++++|++.+.++...|+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 299 AKQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 012233333333 5556555322 246788899999999888765678999999999999999888733998863
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=318.35 Aligned_cols=330 Identities=28% Similarity=0.382 Sum_probs=276.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.++++++++++.|.|.+.+||++||+.++++|+.|+....|..+.. .+|.++|+|++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM--KYPVILGHEVVGTVEEVGENVKGFKP 78 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC--CCCeeccccceEEEEEeCCCCccCCC
Confidence 6899999998889999999999999999999999999999999888866544 56789999999999999999988999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++....+|+.|++|..++.+.|..... +|...+ |+|++|+.++.+.++++|+++
T Consensus 79 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~ 136 (334)
T PRK13771 79 GDRVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELD-------------------GFFAEYAKVKVTSLVKVPPNV 136 (334)
T ss_pred CCEEEECCCCCCcCChhhcCCCcccCccccc---cccccC-------------------ceeeeeeecchhceEECCCCC
Confidence 9999999888999999999999999977432 233223 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++.+++.+++.+.+||+++... .++++++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++ ++++++.
T Consensus 137 ~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~ 213 (334)
T PRK13771 137 SDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVG 213 (334)
T ss_pred CHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCc
Confidence 9999999999999999988555 9999999999998 9999999999999999 899999999999999888 6666654
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH-hhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~ 333 (390)
+ ++.+.++++ +++|++|||+|+.. +..++++++++ |+++.+|.......+..... .+.+++++.+...
T Consensus 214 ~-----~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 282 (334)
T PRK13771 214 S-----KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS-- 282 (334)
T ss_pred h-----hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC--
Confidence 2 355566654 37999999999876 88999999999 99999996543222122221 2445788887642
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
...++++.++++++++.++. .+.+.|+++++++|++.+.++... |+++.+
T Consensus 283 -~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 283 -ATKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred -CCHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 23578999999999997753 367899999999999999877655 988864
|
|
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=318.66 Aligned_cols=340 Identities=23% Similarity=0.402 Sum_probs=270.8
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCCCc
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
..++++++..++. +++.+.+.|+++++||+||+.++++|++|++.+.+..... ...+|.++|||++|+|+++|++++.
T Consensus 16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 3345555566655 8888998888999999999999999999999887632111 1135778999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||+|++.+..+|+.|..|.++.++.|++..+ .+... ..|+|++|+.++.+.++++|
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~------------------~~g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPP------------------VHGSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCC------------------CCCcccceEEcchHHeEECC
Confidence 9999999999999999999999999999987432 11111 12589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++.+++.. .++.++|+++ ...++.+|++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|++.++
T Consensus 154 ~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 99999998763 2455688876 788899999999998899999999999999996788999899999999999999887
Q ss_pred cCCCCCCcCHHHHHHhh---cCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEe
Q 016363 253 NPATCGDKTVSQVIKEM---TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~---~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 328 (390)
++.. ...++.+.+.++ .++++|+|||++|+...+..++++++++ |+++.+|..... ..+....+ .+++++.+
T Consensus 232 ~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~ 307 (364)
T PLN02702 232 LVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVG 307 (364)
T ss_pred ecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEE
Confidence 6532 124576666654 2338999999999766689999999999 999999964322 22333333 44888888
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeecc--ccHHHHHHHHhcCCce-EEEEe
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF--HDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
++.. ...+..++++++++++++.++++++|++ +++++|++.+.++... |+++.
T Consensus 308 ~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 308 VFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred eccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 7532 3568889999999988766667788665 7999999998877665 99885
|
|
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=316.50 Aligned_cols=336 Identities=29% Similarity=0.470 Sum_probs=281.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
||++++.+++. +.+.+.+.|++.+++|+|||.++++|+.|+..+.|..... ..|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~--~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDL--KPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccC--CCCcccccceEEEEEeeCCCCCCCCC
Confidence 68999998875 8999999999999999999999999999999988765422 45779999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCc-----eEE
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH-----VVK 170 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----v~~ 170 (390)
||+|++.+..+|++|.+|..++.++|..... .|.... |+|++|+.++.+. +++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~~~~~~ 135 (343)
T cd08235 78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYD-------------------GGFAEYVRVPAWAVKRGGVLK 135 (343)
T ss_pred CCEEEEccCCCCCCChHHHCcCcccCCCcce---eccCCC-------------------CcceeeEEecccccccccEEE
Confidence 9999999999999999999999999976432 122222 4899999999998 999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++++.+++.+ +++.+||+++ ...++++|++|||+|+|.+|++++|+|+..|++.|+++++++++.+.++++|.++
T Consensus 136 lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~ 213 (343)
T cd08235 136 LPDNVSFEEAALV-EPLACCINAQ-RKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADY 213 (343)
T ss_pred CCCCCCHHHHHhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcE
Confidence 9999999999876 7889999988 4558999999999988999999999999999933999999999999998999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEe
Q 016363 251 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCG 328 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g 328 (390)
++++++ .++.+.+++++++ ++|+||||+++...+...+++++++ |+++.+|.........++...+. ++..+.+
T Consensus 214 ~~~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~ 289 (343)
T cd08235 214 TIDAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITG 289 (343)
T ss_pred EecCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEE
Confidence 998876 6788888888877 8999999999876588999999999 99999986543322333333333 4777776
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
+.... .+.++.++++++++++.+...+..+|+++++.+|++.+.+++..|+|+.
T Consensus 290 ~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 290 SYAAS---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred EecCC---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 64332 4678889999999988764456689999999999999988873388863
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=317.26 Aligned_cols=334 Identities=24% Similarity=0.367 Sum_probs=278.0
Q ss_pred eEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCC
Q 016363 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER 96 (390)
Q Consensus 17 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 96 (390)
|+++++.++..|++.+++.|+|+++|++||+.++++|++|++.+.|..... .+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPT--KYPLVPGHEIVGIVVAVGSKVTKFKVG 78 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCC--CCCcccCcceeeEEEEECCCCcccCCC
Confidence 578889888779999999999999999999999999999999998876444 578999999999999999999999999
Q ss_pred CEEe-eecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 97 DLVL-PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 97 d~V~-~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
|+|+ .....+|++|.+|..++.+.|......+. |....+ ....|+|++|+.++.+.++++|+++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~ 143 (337)
T cd05283 79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYN-GKYPDG--------------TITQGGYADHIVVDERFVFKIPEGL 143 (337)
T ss_pred CEEEEecCCCCCCCCccccCCchhcCcchhhccc-ccccCC--------------CcCCCcceeEEEechhheEECCCCC
Confidence 9997 45566899999999999999987544321 111111 0112589999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+++.+.|||+++ +..++++|++|+|.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 144 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~ 221 (337)
T cd05283 144 DSAAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATK 221 (337)
T ss_pred CHHHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCc
Confidence 9999999999999999987 55679999999998889999999999999999 999999999999999999999988765
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGL 334 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 334 (390)
. .++.+. ..+++|++|||+|.......++++++++ |+++.+|...... .+++..+ .++.++.++....
T Consensus 222 ~---~~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~- 290 (337)
T cd05283 222 D---PEAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG- 290 (337)
T ss_pred c---hhhhhh----ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC-
Confidence 4 333221 2348999999999876588999999999 9999999654322 4444443 4588999887653
Q ss_pred CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 335 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
.++++.++++++++++++ .+ +.|+++++++||+.+.++... |+|++
T Consensus 291 --~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 291 --RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred --HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 578999999999998764 35 789999999999999988875 98874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=322.53 Aligned_cols=347 Identities=20% Similarity=0.198 Sum_probs=281.0
Q ss_pred CccceeeEEEeec--CCC---CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC--------CCCCCC-cccc
Q 016363 11 GKVIRCKAAICRI--PGK---PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL--------PKLPLP-VIFG 76 (390)
Q Consensus 11 ~~~~t~~a~~~~~--~~~---~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~--------~~~~~p-~~~G 76 (390)
..|.+|||+++.. +++ .+++.+.|.|.|++++++||+.++++|+.|++...+.... .....| .++|
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G 82 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG 82 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence 4678899999965 554 3899999999999999999999999999998776553210 000123 3799
Q ss_pred cceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccc
Q 016363 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS 156 (390)
Q Consensus 77 ~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~ 156 (390)
||++|+|+++|++++.|++||+|++....+|++|++|..++.+.|..... .|... ..|+
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~------------------~~g~ 141 (398)
T TIGR01751 83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYET------------------NFGS 141 (398)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccC------------------CCcc
Confidence 99999999999999999999999999999999999999999999965432 12111 1258
Q ss_pred cceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHH--HhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe
Q 016363 157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 157 ~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~--~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 233 (390)
|++|+.++.+.++++|+++++++++.+++++.|||+++.. ..++.+|++|+|+|+ |++|++++++|+.+|+ +++++
T Consensus 142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~ 220 (398)
T TIGR01751 142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAV 220 (398)
T ss_pred ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEE
Confidence 9999999999999999999999999999999999998754 477899999999998 9999999999999999 88888
Q ss_pred cCChhhHHHHHhcCCcEEEcCCCCC-------------------CcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHH
Q 016363 234 DINPEKFEIGKKFGITDFINPATCG-------------------DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNS 293 (390)
Q Consensus 234 ~~~~~~~~~~~~~g~~~v~~~~~~~-------------------~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~ 293 (390)
++++++.+.++++|++.++++++.+ ...+.+.+.+++++ ++|++|||+|... +..++++
T Consensus 221 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~ 299 (398)
T TIGR01751 221 VSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFV 299 (398)
T ss_pred cCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHh
Confidence 8999999999999999999875410 01255667777776 8999999999755 8899999
Q ss_pred hccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHH
Q 016363 294 SREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 372 (390)
Q Consensus 294 l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~ 372 (390)
++++ |+++.+|..... ..+++...+ ..+.++.++.+.. .+++++++++++++++... ++++++++++++|++
T Consensus 300 l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~ 372 (398)
T TIGR01751 300 CRRG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQ 372 (398)
T ss_pred hccC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHH
Confidence 9999 999999965432 123333333 3477777775443 3567889999999977643 679999999999999
Q ss_pred HHhcCCce-EEEEecC
Q 016363 373 LLLEGKSL-RCIIWMD 387 (390)
Q Consensus 373 ~~~~~~~~-kvvl~~~ 387 (390)
.+.++... |+|+++.
T Consensus 373 ~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 373 DVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHcCCCCceEEEEeC
Confidence 99887765 9998875
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=315.59 Aligned_cols=325 Identities=21% Similarity=0.353 Sum_probs=263.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC---------CCCCCCCcccccceeEEEEEe
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD---------LPKLPLPVIFGHEAVGVVESV 86 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---------~~~~~~p~~~G~e~~G~V~~v 86 (390)
|||+++..+ ++++++++.|++++++|+|||.++++|+.|++...|... .....+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 688998876 599999999999999999999999999999999887321 001135789999999999999
Q ss_pred CCCCCc-CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 87 GEYVEE-VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 87 G~~v~~-~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
|+++++ |++||+|++.+...|+.|+.|..+..+ . ..|+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-------------~-------------------~~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-------------E-------------------APGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-------------C-------------------CCCceeeeEEech
Confidence 999987 999999999999999999999432110 0 1258999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
+.++++|+++++++++ +++++++||+++ ...++++|++|||+|+|++|++++|+|+.+|++.++++++++++.+.+++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999887 667889999984 88999999999999889999999999999999668888889999999999
Q ss_pred cCCcEEEcCCCCCCcCHHH---HHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-h
Q 016363 246 FGITDFINPATCGDKTVSQ---VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-I 320 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~---~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~ 320 (390)
+|++++++++. .+..+ .+.+...+ ++|++||++|+...+..++++++++ |+++.+|....... +.+.. +
T Consensus 205 ~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~ 278 (341)
T cd08262 205 MGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAI 278 (341)
T ss_pred cCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHh
Confidence 99998998765 32211 34445555 8999999999854588899999999 99999986532222 22222 3
Q ss_pred hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 321 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
.++.++.++... ..+.+.+++++++++++++.+++.+.|+++++++|++.+.++... |+|++
T Consensus 279 ~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 279 RKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred hcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 347777655322 245788999999999988766677999999999999999887765 98874
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=316.96 Aligned_cols=318 Identities=21% Similarity=0.240 Sum_probs=255.0
Q ss_pred CCccceeeEEEeec-CCC-----CcEEEEe---ecC-CCCCCeEEEEEeeeecccccccccccCCCCCCCCCCccccc--
Q 016363 10 AGKVIRCKAAICRI-PGK-----PLVIEEI---EVE-PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGH-- 77 (390)
Q Consensus 10 ~~~~~t~~a~~~~~-~~~-----~~~~~~~---~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~-- 77 (390)
++.+.+.|.+++.. +.+ .|++.+. +.| ++++|||||||.++++|+.|.....+..... ..|.++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~--~~p~~~G~~~ 80 (348)
T PLN03154 3 EGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSY--LPPFVPGQRI 80 (348)
T ss_pred CCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCC--CCCcCCCCee
Confidence 35667778888854 322 2888774 555 3589999999999999999876544322222 36889998
Q ss_pred ceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccccccc
Q 016363 78 EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 157 (390)
Q Consensus 78 e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~ 157 (390)
|++|+|..+|++++.|++||+|++. |+|
T Consensus 81 ~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~ 108 (348)
T PLN03154 81 EGFGVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGW 108 (348)
T ss_pred EeeEEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCc
Confidence 8899999999999999999999753 379
Q ss_pred ceeEEeeCCc--eEE--cCCCCCcc-hhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEE
Q 016363 158 TEYSVVDITH--VVK--ITPHIPLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKII 231 (390)
Q Consensus 158 a~~~~v~~~~--v~~--~p~~~~~~-~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi 231 (390)
+||.+++.+. +++ +|++++++ +++.++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus 109 aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi 187 (348)
T PLN03154 109 EEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVV 187 (348)
T ss_pred EEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEE
Confidence 9999998753 544 48999987 688899999999999878889999999999998 9999999999999999 899
Q ss_pred EecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC
Q 016363 232 GVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310 (390)
Q Consensus 232 ~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 310 (390)
++++++++.+.++ ++|++.++++.+ ..++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|.....
T Consensus 188 ~~~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~~-~~~~~~~l~~~-G~iv~~G~~~~~ 263 (348)
T PLN03154 188 GSAGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGDM-LDAALLNMKIH-GRIAVCGMVSLN 263 (348)
T ss_pred EEcCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHHhccC-CEEEEECccccC
Confidence 9999999999997 799999998764 136778888877668999999999864 89999999999 999999965422
Q ss_pred CC-c---ccchHh-hhcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EE
Q 016363 311 SP-I---SLNSIE-ILKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RC 382 (390)
Q Consensus 311 ~~-~---~~~~~~-~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 382 (390)
.. . .++... +.+++++.|+....+. ..+.++++++++++|++++. ++.+|+|+++++|++.+++++.. |+
T Consensus 264 ~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKv 341 (348)
T PLN03154 264 SLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQ 341 (348)
T ss_pred CCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceE
Confidence 10 0 112333 3448888888654321 13567889999999988754 66789999999999999988876 99
Q ss_pred EEecCC
Q 016363 383 IIWMDK 388 (390)
Q Consensus 383 vl~~~~ 388 (390)
|+++++
T Consensus 342 Vl~~~~ 347 (348)
T PLN03154 342 VIRVAK 347 (348)
T ss_pred EEEecC
Confidence 999865
|
|
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=315.42 Aligned_cols=333 Identities=29% Similarity=0.469 Sum_probs=273.1
Q ss_pred EEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CCCCCCCCcccccceeEEEEEeCCCCCcCCCC
Q 016363 18 AAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKER 96 (390)
Q Consensus 18 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 96 (390)
|+++++++. +.+.+.+.|.+.++||+|+|.++++|+.|++.+.+.. ......+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467788855 9999999999999999999999999999998764321 11101357789999999999999999999999
Q ss_pred CEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCC
Q 016363 97 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP 176 (390)
Q Consensus 97 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~ 176 (390)
|+|++.+..+|++|++|+.+.+++|++..... ..... |+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAA--TPPVD-------------------GTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCccccc--cccCC-------------------CceeeeEEecHHHcEECcCCCC
Confidence 99999899999999999999999998753310 00111 5899999999999999999999
Q ss_pred cchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCC
Q 016363 177 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256 (390)
Q Consensus 177 ~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~ 256 (390)
+.+++.+ .++++||+++ +..++++|++|||.|+|.+|++++|+|+.+|+++|+++++++++.+.++++|++.+++.++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9999877 5788999986 8899999999999988999999999999999944999999999999999999999998766
Q ss_pred CCCcC---HHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeec
Q 016363 257 CGDKT---VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYF 331 (390)
Q Consensus 257 ~~~~~---~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 331 (390)
.+ +.+.+.+.+++ ++|++|||+|+...++..+++++++ |+++.+|..... ..++... ..+++++.++..
T Consensus 217 ---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd05285 217 ---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFR 290 (343)
T ss_pred ---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEecc
Confidence 44 37778887777 8999999999875589999999999 999999854432 2223222 334677776642
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC--ceEEEE
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK--SLRCII 384 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~--~~kvvl 384 (390)
. .+.+++++++++++++.+.+.++++|+++++.+|++.+.++. .+|+++
T Consensus 291 ~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 291 Y----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred C----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2 267888999999998766555778999999999999998774 369987
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=311.82 Aligned_cols=333 Identities=27% Similarity=0.406 Sum_probs=274.3
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
||++++++++...++++.|.|++.++|++|||.++++|++|+..+.|..+. ..|.++|||++|+|+++|++++.|++
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVTSLKV 77 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCccCCC
Confidence 789999998874448899999999999999999999999999988886532 24678999999999999999999999
Q ss_pred CCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 96 RDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 96 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
||+|++.+ ..+|+.|.+|..+..+.|.+... .|+..+ |+|++|+.++.+.++++|++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~ 135 (338)
T PRK09422 78 GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVD-------------------GGMAEQCIVTADYAVKVPEG 135 (338)
T ss_pred CCEEEEccCCCCCCCChhhcCCCcccCCCccc---cCcccc-------------------CcceeEEEEchHHeEeCCCC
Confidence 99998754 45899999999999999976532 233333 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+++.+++.+++.+.|||+++ ..+++++|++|||+|+|++|++++++|+. .|+ +|+++++++++.+.++++|++.+++
T Consensus 136 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 213 (338)
T PRK09422 136 LDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTIN 213 (338)
T ss_pred CCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEec
Confidence 99999999999999999987 78899999999999999999999999998 599 8999999999999999999999888
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 332 (390)
++. ..++.+.+++..+ ++|+++.+.++...+..++++++.+ |+++.+|.... ..+++...+ .++..+.++..+
T Consensus 214 ~~~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 287 (338)
T PRK09422 214 SKR--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG 287 (338)
T ss_pred ccc--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC
Confidence 642 1356777777765 6895555555555689999999999 99999986532 233333322 346777776433
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
. .++++.+++++++++++. .+ ..++++++++|++.+.++... |+++.+.
T Consensus 288 ~---~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 288 T---RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred C---HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 2 567889999999997754 35 468999999999999887776 9998754
|
|
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=310.84 Aligned_cols=335 Identities=27% Similarity=0.439 Sum_probs=283.5
Q ss_pred eeEEEeecCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++++++ ..+++.+.+.|.|.+++++||+.++++|+.|+..+.|..+.. ...|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK-PKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC-CCCCccCCcccceEEEEeCCCCCCCC
Confidence 7899999887 349999999999999999999999999999999888765432 24577899999999999999999999
Q ss_pred CCCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+||+|+..+ ..+|+.|.+|..++.+.|.+... .|+... |+|++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~s~~~~~~~~~~~lp~ 137 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVD-------------------GTFAEYAIADARYVTPIPD 137 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccC-------------------CcceeEEEeccccEEECCC
Confidence 999999875 57899999999999999987543 333333 4799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++.+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.++
T Consensus 138 ~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~ 215 (341)
T cd08297 138 GLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFV 215 (341)
T ss_pred CCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998754 58999999999998 7799999999999999 999999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~ 330 (390)
++.+ .++.+.+.+++++ ++|++||+.+....+..++++++++ |+++.+|.... ...+++...+. ++.++.+..
T Consensus 216 ~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (341)
T cd08297 216 DFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSL 290 (341)
T ss_pred cCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEec
Confidence 8876 5788888888876 9999999887766689999999999 99999986542 22344444443 477887754
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
... .++++.++++++++++.+ .+ ..|+++++.+|++.+..+... |+++++
T Consensus 291 ~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 291 VGT---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred cCC---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 332 578899999999998764 35 679999999999999887765 999875
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=318.96 Aligned_cols=338 Identities=25% Similarity=0.377 Sum_probs=272.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC------CCCCCCCCcccccceeEEEEEeCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST------DLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
+.+.++..+ .+++.++|.|++++++++||+.++++|++|++.+.+.. +.. ..+|.++|||++|+|+++|++
T Consensus 29 ~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~ 105 (384)
T cd08265 29 LGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGL-TEFPVVIGHEFSGVVEKTGKN 105 (384)
T ss_pred ceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcc-cCCCcccccceEEEEEEECCC
Confidence 444555543 39999999999999999999999999999998876421 111 156889999999999999999
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceE
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 169 (390)
++.|++||+|++.+..+|+.|+.|..++.++|..+.. .|+..+ |+|++|+.++++.++
T Consensus 106 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~-------------------g~~~~~v~v~~~~~~ 163 (384)
T cd08265 106 VKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSAD-------------------GAFAEYIAVNARYAW 163 (384)
T ss_pred CCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCC-------------------CcceeeEEechHHeE
Confidence 9999999999999999999999999999999986542 233223 489999999999999
Q ss_pred EcCCCC-------CcchhhccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHH
Q 016363 170 KITPHI-------PLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241 (390)
Q Consensus 170 ~~p~~~-------~~~~aa~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~ 241 (390)
++|+++ ++. ++.++.++++||+++... .++++|++|||+|+|++|++++++|+.+|+.+|+++++++++.+
T Consensus 164 ~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~ 242 (384)
T cd08265 164 EINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRN 242 (384)
T ss_pred ECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 999864 444 556667899999988666 68999999999988999999999999999877999999999999
Q ss_pred HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccCh-HHHHHHHHHhccCCceEEEEcccCCCCCcccchHh
Q 016363 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 319 (390)
Q Consensus 242 ~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~ 319 (390)
.++++|+++++++++....++.+.+.+++++ ++|+|+|++|+. ..+..++++++++ |+++.+|.... ..+++...
T Consensus 243 ~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~ 319 (384)
T cd08265 243 LAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEV 319 (384)
T ss_pred HHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHH
Confidence 9999999999887641123788889888887 999999999973 3478899999999 99999986533 22333333
Q ss_pred hh-cceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEE
Q 016363 320 IL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384 (390)
Q Consensus 320 ~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 384 (390)
+. +..++.++.... ....+.+++++++++.+++..++++.|+++++++|++.+.++...|+++
T Consensus 320 ~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 320 LQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred HhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 33 366777764322 1346889999999998887666778999999999999976665458775
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=310.29 Aligned_cols=334 Identities=27% Similarity=0.442 Sum_probs=282.6
Q ss_pred eeEEEeecCCCC-cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKP-LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~-~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++..++++ +.+.+.+.|.+++++|+|++.++++|+.|+....|..+.. ..+|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~-~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTL-TKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCccc-CCCCEeccccccEEEEEECCCCccCC
Confidence 789999999987 6778888888999999999999999999999988876522 15678999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|+..+..+|+.|.+|..++.+.|..... .|...+ |+|++|+.++.+.++++|++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~ 137 (338)
T cd08254 80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGID-------------------GGFAEYIVVPARALVPVPDG 137 (338)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccC-------------------CcceeeEEechHHeEECCCC
Confidence 99999999999999999999999999955322 233333 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++.+++.++.+++|||+++.....++++++|||.|+|.+|++++++|+..|+ +|+++++++++.+.++++|.+.+++.
T Consensus 138 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~ 216 (338)
T cd08254 138 VPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNS 216 (338)
T ss_pred CCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcC
Confidence 99999999999999999998778889999999998879999999999999999 89999999999999999999888877
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (390)
.+ ..+.+.+ +...+ ++|+++||+|....+..++++|+++ |+++.+|..... ..++...+.. +.++.++...
T Consensus 217 ~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~ 289 (338)
T cd08254 217 LD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDK--LTVDLSDLIARELRIIGSFGG 289 (338)
T ss_pred CC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCC--CccCHHHHhhCccEEEEeccC
Confidence 65 5566666 45555 8999999999776688999999999 999999865322 2333343443 7777776533
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
. .+.+..++++++++.+.+. + +.+++++++++++.+.+++.. |+|+++
T Consensus 290 ~---~~~~~~~~~ll~~~~l~~~--~-~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 T---PEDLPEVLDLIAKGKLDPQ--V-ETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred C---HHHHHHHHHHHHcCCCccc--c-eeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 2 5678899999999988754 4 789999999999999888766 999874
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=312.10 Aligned_cols=339 Identities=30% Similarity=0.450 Sum_probs=274.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||+++++.++..+++.+.+.|.|+++|++|||.++++|+.|+.++.+... ......|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 68999998886699999999999999999999999999999987654321 11114577899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++++.|..... .|... .|+|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI---LGVDT-------------------DGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccce---EeccC-------------------CCcceEEEEechHHcEECcCC
Confidence 99999999999999999999999999975422 22222 258999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++++.+ .++..+.++++++. ...++|++|||.|+|.+|++++|+|+.+|+++|++++++++|.+.++++|++++++.
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998544 56667888888763 456899999998889999999999999998678899888999999999999988877
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
+. .++. .+.+++++ ++|++||++|+......++++|+++ |+++.+|.........+....+.++..+.+.....
T Consensus 216 ~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (341)
T cd05281 216 RE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK 290 (341)
T ss_pred cc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC
Confidence 65 5677 78888877 9999999999877688999999999 99999985543222222222344577777664221
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
..+.+.+++++++++.+++...+.+.++++++++|++.+.++...|+++++
T Consensus 291 --~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 291 --MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred --cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 235677899999999887766677889999999999999887733998864
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=310.81 Aligned_cols=336 Identities=27% Similarity=0.472 Sum_probs=278.0
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++++++. +.+.+.++|+++++|++||+.++++|+.|+....+.. .. ..|.++|+|++|+|+.+|++++.|++
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~--~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AY--HPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CC--CCCcccCcceEEEEEEECCCCCcCCC
Confidence 68999999876 9999999999999999999999999999999887754 22 46788999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+...|+.|.+|..+.+..|+.... +|.... |+|++|+.++.+.++++|+++
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lP~~~ 134 (343)
T cd08236 77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRD-------------------GAFAEYVSVPARNLIKIPDHV 134 (343)
T ss_pred CCEEEEcCCCCCCCChhHHCcChhhCCCcce---EecccC-------------------CcccceEEechHHeEECcCCC
Confidence 9999999989999999999999999976432 222222 589999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+ ..++|||+++ ....++++++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++|++.+++++
T Consensus 135 ~~~~aa~~-~~~~ta~~~l-~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~ 212 (343)
T cd08236 135 DYEEAAMI-EPAAVALHAV-RLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK 212 (343)
T ss_pred CHHHHHhc-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc
Confidence 99999887 5789999988 478899999999998899999999999999994499999999999999999999999877
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCccc-chH-hhhcceeEEeeecC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSI-EILKGRSVCGTYFG 332 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~-~~~~~~~i~g~~~~ 332 (390)
+ .. .+.+.+..++ ++|++|||+|....+..++++|+++ |+++.+|.......... ... .+.++.++.++...
T Consensus 213 ~---~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (343)
T cd08236 213 E---ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNS 287 (343)
T ss_pred c---cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeec
Confidence 6 45 6777777776 8999999998876689999999999 99999996543211111 111 23447888877653
Q ss_pred CCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhc-CCce-EEEE
Q 016363 333 GLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLE-GKSL-RCII 384 (390)
Q Consensus 333 ~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~-~~~~-kvvl 384 (390)
... ..+.+++++++++++++.+.+.+.+.+++++++++++.+.+ +... |+|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 288 YSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 221 24568889999999987644446689999999999999988 5554 8764
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=307.58 Aligned_cols=316 Identities=21% Similarity=0.346 Sum_probs=263.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++. +++.+.+.|+++++||+||+.++++|++|+....|..+ +|.++|+|++|+|+++|++ +++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC---CCC
Confidence 68999998764 99999999999999999999999999999999888642 5678999999999999987 789
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCC-CCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
||+|.+.+..+|+.|.+|..+.++.|.+... .++. .+ |+|++|+.++.+.++++|++
T Consensus 72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~ 129 (319)
T cd08242 72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRD-------------------GAFAEYLTLPLENLHVVPDL 129 (319)
T ss_pred CCeEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCC-------------------CceEEEEEechHHeEECcCC
Confidence 9999999999999999999999999876432 2221 12 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++++++.+ .++.++|. +.+..++++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++.+.++++|++.++++
T Consensus 130 ~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~ 206 (319)
T cd08242 130 VPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPD 206 (319)
T ss_pred CCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCc
Confidence 999888764 34556665 4478899999999999889999999999999999 79999999999999999999888776
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFG 332 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 332 (390)
.+ . +++ ++|++|||+|+...+..++++++++ |+++..+.... ...++...+ .++.++.+...+
T Consensus 207 ~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 271 (319)
T cd08242 207 EA---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG 271 (319)
T ss_pred cc---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc
Confidence 44 1 233 8999999999876689999999999 99998764432 233333333 347788877533
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.+++++++++++++++.+++++.|+++++++||+.+.++..+|+++++
T Consensus 272 ------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 272 ------PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred ------cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 278899999999987666688999999999999999877656999864
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=308.89 Aligned_cols=310 Identities=23% Similarity=0.261 Sum_probs=261.8
Q ss_pred eeEEEeecCCCC---cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|||+++.+++.+ +++.++|.|.+.++||+|||.++++|+.|+..+.|..+.. ..+|.++|||++|+|+++|+++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~-~~~p~~~G~e~~G~V~~~G~~v~~ 79 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYK-PELPAIGGSEAVGVVDAVGEGVKG 79 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC-CCCCCCCCcceEEEEEEeCCCCCC
Confidence 689999888754 7889999999999999999999999999999998865422 156889999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||+|++... .|+|++|+.++.+.++++|
T Consensus 80 ~~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip 110 (324)
T cd08292 80 LQVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLP 110 (324)
T ss_pred CCCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECC
Confidence 999999987531 1489999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++++++.+++.+.|||+++ +..++++|++|||+|+ |.+|++++|+|+.+|+ +|++++.++++.+.++++|++++
T Consensus 111 ~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~ 188 (324)
T cd08292 111 DGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPV 188 (324)
T ss_pred CCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEE
Confidence 9999999999998899999987 6689999999999988 9999999999999999 89999999999999988999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 329 (390)
++..+ .++.+.+.+++++ ++|+|||++|+.. ...++++++++ |+++.+|... ....+++... +.++.++.++
T Consensus 189 ~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 262 (324)
T cd08292 189 VSTEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGF 262 (324)
T ss_pred EcCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEE
Confidence 88766 6788889999888 9999999999875 78999999999 9999998653 2233344332 3458888887
Q ss_pred ecCCCC-------chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 330 YFGGLK-------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 330 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
...... ..+.+..+++++.++++++. +.+.|+++++.+|++.+.+.... |++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 263 WGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred EcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 654321 13467889999999988754 46889999999999998876655 88763
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=308.46 Aligned_cols=269 Identities=20% Similarity=0.376 Sum_probs=222.9
Q ss_pred ccccceeEEEEEeCCCCC------cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCce
Q 016363 74 IFGHEAVGVVESVGEYVE------EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 147 (390)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~------~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 147 (390)
++|||++|+|+++|++|+ +|++||||++.+..+|+.|.+|+.++++.|.+... .|....+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccC----------
Confidence 579999999999999999 89999999999999999999999999999987543 12211000
Q ss_pred eeccccccccceeEEeeCC-ceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 016363 148 IHHFLNISSFTEYSVVDIT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR 226 (390)
Q Consensus 148 ~~~~~~~g~~a~~~~v~~~-~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g 226 (390)
.....|+|+||+.+|++ .++++|+++++++++.+++.+.|||+++ +.....+|++|||+|+|++|++++|+|+.+|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00012589999999997 7999999999999999999999999987 5566679999999999999999999999999
Q ss_pred CCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 227 ASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 227 ~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+++|++++++++|.++++++|++.++++.+ ..+.+.+++.+ ++|++||++|....++.++++++++ |+++.+|
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G 218 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence 956999999999999999999999887643 34566677766 8999999999888789999999999 9999999
Q ss_pred ccCCCCCcccchHhhhc-ceeEEeeecCCCCchhhHHHHHHHHHcC--CCCCccceeeeeccccH
Q 016363 306 VEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDI 367 (390)
Q Consensus 306 ~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~~ 367 (390)
........++++..+.. ++++.|+..+. .++++++++++.++ ++++.++++++|+|+++
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 219 SVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 65432334556655554 89999986433 56899999999984 67777889999999874
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=308.04 Aligned_cols=333 Identities=23% Similarity=0.393 Sum_probs=265.9
Q ss_pred EeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccc-cCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCE
Q 016363 20 ICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDL 98 (390)
Q Consensus 20 ~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~ 98 (390)
++++.+. +.+.+.++|+++++||+|||.++++|++|+...+ +.........|.++|+|++|+|+++|+++++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4666766 9999999999999999999999999999988764 3221111135778999999999999999999999999
Q ss_pred EeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcc
Q 016363 99 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG 178 (390)
Q Consensus 99 V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~ 178 (390)
|++.+..+|++|.+|..|+.+.|.++.+ .+... +.....|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~--------------~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAM--------------RFPHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecc--------------ccCCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999999999999987532 11100 000012589999999999999999999999
Q ss_pred hhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC
Q 016363 179 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258 (390)
Q Consensus 179 ~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 258 (390)
+|+. ..++++||+++.....+ ++++|||.|+|.+|++++|+|+.+|+++|+++++++++.++++++|.++++++++
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 9876 56888999987555555 9999999888999999999999999867999999999999889999999998765
Q ss_pred CcCHHHHHHhhc-CC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeecCCCC
Q 016363 259 DKTVSQVIKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLK 335 (390)
Q Consensus 259 ~~~~~~~i~~~~-~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~ 335 (390)
.++ .++. .. ++|++||++|+...++..+++|+++ |+++.+|... .....+... +.+++++.+...
T Consensus 220 -~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~---- 287 (339)
T cd08232 220 -DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR---- 287 (339)
T ss_pred -hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec----
Confidence 332 2222 22 7999999999766688999999999 9999998543 223333333 334777777642
Q ss_pred chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 336 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
..+.+++++++++++++++...++++|+++++++|++.+.++... |+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 288 FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 245788999999999887766677999999999999999876655 999864
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=305.37 Aligned_cols=336 Identities=22% Similarity=0.340 Sum_probs=280.4
Q ss_pred eeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||++++..+. .+.+.+.+.|++.+++|+|++.++++|++|+..+.|..... ..+|.++|||++|+|+.+|++++.|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK-LPLPHILGSDGAGVVEAVGPGVTNV 79 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCC-CCCCeecccceEEEEEEeCCCCCCC
Confidence 68999985443 27888888888899999999999999999999888764322 2568899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+..+|+.|.+|.+++++.|..... .|.... |+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~-------------------g~~~~~~~~~~~~~~~~p~ 137 (342)
T cd08266 80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVD-------------------GGYAEYVAVPARNLLPIPD 137 (342)
T ss_pred CCCCEEEEccccccccchhhccccccccccccc---cccccC-------------------cceeEEEEechHHceeCCC
Confidence 999999999999999999999999999976422 233222 4799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++++.+||+++.+..++.++++++|+|+ +.+|++++++++..|+ +|+.+++++++.+.++.++.+.++
T Consensus 138 ~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~ 216 (342)
T cd08266 138 NLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVI 216 (342)
T ss_pred CCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEE
Confidence 99999999999999999999888899999999999998 7999999999999999 899999999999999888887777
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch-HhhhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 330 (390)
+..+ .++.+.+.+.+.+ ++|++++++|... +...+++++++ |+++.+|..... ...++. ..+.++.++.+..
T Consensus 217 ~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 290 (342)
T cd08266 217 DYRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGST 290 (342)
T ss_pred ecCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEe
Confidence 6654 5677777777766 8999999999865 88999999999 999999865432 223333 2345588888775
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
... ...+.+++++++++.+.+ .+++.|+++++++|++.+.++... |+++++
T Consensus 291 ~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 291 MGT---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cCC---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 443 457888999999997654 367899999999999999877665 988763
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=303.98 Aligned_cols=329 Identities=33% Similarity=0.499 Sum_probs=274.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++..+++++.+.+.|.|.+.+++|+|+++++++|+.|++...|..+.. ..|.++|+|++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG--KYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC--CCCeeccccceEEEEEECCCCccCCC
Confidence 6899998865669999999999999999999999999999999988866544 57889999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++....+|+.|++|..+..+.|.+. . ..|.... |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~ 136 (332)
T cd08259 79 GDRVILYYYIPCGKCEYCLSGEENLCRNR-A--EYGEEVD-------------------GGFAEYVKVPERSLVKLPDNV 136 (332)
T ss_pred CCEEEECCCCCCcCChhhhCCCcccCCCc-c--ccccccC-------------------CeeeeEEEechhheEECCCCC
Confidence 99999999899999999999999999864 1 1333222 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++++++.+++++.|||+++.. ..+++++++||+|+ |.+|++++++++..|+ +|+++++++++.+.+++++.+.+++.
T Consensus 137 ~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 214 (332)
T cd08259 137 SDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDG 214 (332)
T ss_pred CHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999998865 88999999999998 9999999999999999 89999999999999988898777754
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH-hhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~ 333 (390)
. ++.+.+.+.. ++|++++++|... ...++++++++ |+++.+|....... .+... ...++..+.++..
T Consensus 215 ~-----~~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-- 282 (332)
T cd08259 215 S-----KFSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDPA-PLRPGLLILKEIRIIGSIS-- 282 (332)
T ss_pred H-----HHHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCCc-CCCHHHHHhCCcEEEEecC--
Confidence 2 2555565543 7999999999877 88899999999 99999986432211 11222 2234666666532
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
...+++++++++++++.+.+ .+++.|+++++++|++.+.++... |++++
T Consensus 283 -~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 283 -ATKADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred -CCHHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 23577889999999997654 367899999999999999887765 88764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=309.36 Aligned_cols=311 Identities=21% Similarity=0.236 Sum_probs=249.0
Q ss_pred eeEEEeecCCC-CcEEEEeec----CCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccce--eEEEEEeCC
Q 016363 16 CKAAICRIPGK-PLVIEEIEV----EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA--VGVVESVGE 88 (390)
Q Consensus 16 ~~a~~~~~~~~-~~~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~--~G~V~~vG~ 88 (390)
+|++....+.. .|++.+.++ |+|++|||||||++++||+.|++.+.|..... ...|.++|+++ .|++..+|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~-~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSL-YLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccc-cCCCcCCCCeEeccEEEEEEec
Confidence 45555444432 389999988 77999999999999999999999988854321 14678889754 456666888
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC-Cc
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-TH 167 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~ 167 (390)
.++.|++||+|++. |+|+||++++. +.
T Consensus 87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~ 114 (338)
T cd08295 87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD 114 (338)
T ss_pred CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence 88899999999753 37999999999 79
Q ss_pred eEEcC-CCCCcc-hhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 168 VVKIT-PHIPLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 168 v~~~p-~~~~~~-~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
++++| +++++. +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus 115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK 193 (338)
T ss_pred eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99995 678887 788999999999999888899999999999998 9999999999999999 8999999999999999
Q ss_pred h-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCc----ccchHh
Q 016363 245 K-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI----SLNSIE 319 (390)
Q Consensus 245 ~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~~~~ 319 (390)
+ +|+++++++.+ +.++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|........ ..+...
T Consensus 194 ~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~ 269 (338)
T cd08295 194 NKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLN 269 (338)
T ss_pred HhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHH
Confidence 8 99999998653 136888888877569999999999855 89999999999 999999864322110 112222
Q ss_pred -hhcceeEEeeecCCCCc--hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 320 -ILKGRSVCGTYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 320 -~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+.+++++.++....... .+.++++++++.++++++. +...|+++++.+|++.+.++... |+++++
T Consensus 270 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 270 IIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 33477788765443321 3457889999999988765 44679999999999999887765 999864
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=303.93 Aligned_cols=330 Identities=26% Similarity=0.476 Sum_probs=276.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++. +.+.+.+.|++.++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+.+|+++++|++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCCCCCC
Confidence 68999998885 999999999999999999999999999999988886542 37789999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.....|+.|.+|..++.++|..... .|.... |+|++|+.++.+.++++|+++
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~ 134 (334)
T cd08234 77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRN-------------------GGFAEYVVVPAKQVYKIPDNL 134 (334)
T ss_pred CCEEEEcCCcCCCCCccccCcChhhCCCcce---eccCCC-------------------CcceeEEEecHHHcEECcCCC
Confidence 9999998888999999999999999977532 222222 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++.+++.+ ..+.++++++ ..+++++|++|||+|+|.+|++++++|+..|+++|+++++++++.+.++++|++.+++.+
T Consensus 135 ~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (334)
T cd08234 135 SFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS 212 (334)
T ss_pred CHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC
Confidence 99998876 6788999987 888999999999998899999999999999994489999999999999999988888776
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGG 333 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 333 (390)
. .++... +.+.+ ++|++||++|.......++++++++ |+++.+|........++.+..+. ++.++.+....
T Consensus 213 ~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 285 (334)
T cd08234 213 R---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN- 285 (334)
T ss_pred C---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-
Confidence 5 445444 33444 8999999998766688999999999 99999986543333445554444 47777776432
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
.+.+++++++++++++.+...++++|+++++++|++.+.+ ... |+++
T Consensus 286 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 286 ---PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred ---HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 3568889999999988776656789999999999999988 444 8876
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=306.00 Aligned_cols=320 Identities=25% Similarity=0.358 Sum_probs=262.1
Q ss_pred eeEEEeecCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++.+++ ..+++.+.+.|+++++||+||+.++++|++|+..+.+. ... .+|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~--~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVK--PMPHIPGAEFAGVVEEVGDHVKGVK 77 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCC--CCCeecccceeEEEEEECCCCCCCC
Confidence 6889988776 34888888888899999999999999999999887642 222 3577899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++++.|.+... +|.... |+|++|+.++.+.++++|++
T Consensus 78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~ 135 (325)
T cd08264 78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSN-------------------GGYAEYIVVPEKNLFKIPDS 135 (325)
T ss_pred CCCEEEECCCcCCCCChhhcCCCccccCccce---eeccCC-------------------CceeeEEEcCHHHceeCCCC
Confidence 99999999989999999999999999987442 233222 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+++++++.+++.+.+||+++. ..++++|++|+|+|+ |++|++++++|+.+|+ +|+++++ .+.++++|++++++
T Consensus 136 ~~~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~ 209 (325)
T cd08264 136 ISDELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVD 209 (325)
T ss_pred CCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeec
Confidence 999999999999999999874 589999999999998 9999999999999999 8888863 36777899988887
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (390)
.++ +.+.+.+++ +++|+|+|++|... +..++++++++ |+++.+|... .....++...+.. +.++.++..+
T Consensus 210 ~~~-----~~~~l~~~~-~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 280 (325)
T cd08264 210 YDE-----VEEKVKEIT-KMADVVINSLGSSF-WDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGG 280 (325)
T ss_pred chH-----HHHHHHHHh-CCCCEEEECCCHHH-HHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCC
Confidence 643 355666666 68999999999854 89999999999 9999998642 2223444444444 6777776544
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EE
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RC 382 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 382 (390)
. +++++++++++.+.+ + .+++.|+++++++|++.+.++... |+
T Consensus 281 ~---~~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 281 T---RKELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred C---HHHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 3 578889999996443 2 356899999999999998876544 43
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=303.20 Aligned_cols=334 Identities=28% Similarity=0.444 Sum_probs=271.5
Q ss_pred ecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCCCcccccceeEEEEEeCCCCCcCCCCCEEe
Q 016363 22 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 100 (390)
Q Consensus 22 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~ 100 (390)
++++.++++.+.|.|+|+++|++||+.++++|+.|+.++.+.... ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 567777999999999999999999999999999999876554211 1114577899999999999999999999999999
Q ss_pred eecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchh
Q 016363 101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180 (390)
Q Consensus 101 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~a 180 (390)
+.+...|+.|..|..+..+.|.+.+. +|+... |+|++|+.++++.++++|++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD-------------------GCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---EeecCC-------------------CcceeEEEeehHHcEECcCCCChHhh
Confidence 99999999999999999999988543 222222 48999999999999999999998654
Q ss_pred hccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCc
Q 016363 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
+++.++.+|++++ ....++|++|+|.|+|++|++++|+|+.+|++.|+++++++++.+.++++|++.+++... .
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~ 216 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---E 216 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---c
Confidence 5677888998875 455789999999888999999999999999944889988899999999999988888766 6
Q ss_pred CHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCCchhh
Q 016363 261 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD 339 (390)
Q Consensus 261 ~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 339 (390)
++.+.+.+++++ ++|++|||+|+...+...+++|+++ |+++.+|........++....+.++.++.+... ....+.
T Consensus 217 ~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 293 (340)
T TIGR00692 217 DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFET 293 (340)
T ss_pred CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhh
Confidence 788888888776 9999999999877688999999999 999999865322222222223344667766542 112356
Q ss_pred HHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 340 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
+.+++++++++++++.+++.+.++++++.++++.+.++...|+++++
T Consensus 294 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 294 WYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 78899999999887655577999999999999998877656998864
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=301.07 Aligned_cols=323 Identities=24% Similarity=0.357 Sum_probs=269.2
Q ss_pred eeEEEeecCCC----CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 16 CKAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 16 ~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
||++++.++++ ++.+.+.+.|.++++||+||+.++++|++|++.+.|..+.. .+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~ 78 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPP--KLPLIPGHEIVGRVEAVGPGVT 78 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCC--CCCccccccccEEEEEECCCCC
Confidence 68999998884 58888888888999999999999999999999988876544 5788999999999999999999
Q ss_pred cCCCCCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 92 EVKERDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 92 ~~~vGd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+|++||+|+..+ ..+|++|.+|..++.++|+...+ .|+..+ |+|++|+.++.+.+++
T Consensus 79 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~ 136 (329)
T cd08298 79 RFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVD-------------------GGYAEYMVADERFAYP 136 (329)
T ss_pred CCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccC-------------------CceEEEEEecchhEEE
Confidence 999999997654 45899999999999999987654 233323 4799999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++++.+++.+++++.|||+++ +.++++++++|||+|+|++|++++++++..|+ +|+++++++++.+.++++|++.
T Consensus 137 lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 214 (329)
T cd08298 137 IPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADW 214 (329)
T ss_pred CCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcE
Confidence 999999999999999999999988 88999999999999889999999999999999 9999999999999999999988
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (390)
+++... . ..+++|+++++.+....++.++++++++ |+++.+|.... ....++...+..+..+.+..
T Consensus 215 ~~~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~ 280 (329)
T cd08298 215 AGDSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVA 280 (329)
T ss_pred EeccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEec
Confidence 877654 1 1237999999877666789999999999 99999885321 11222233334466666664
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
.. ..+.+..++++++++.+++ . .+.|+++++++|++.+.++... |+++
T Consensus 281 ~~---~~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 281 NL---TRQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred CC---CHHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 32 2467888999999998765 2 4889999999999999887765 7763
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=303.65 Aligned_cols=299 Identities=19% Similarity=0.213 Sum_probs=235.4
Q ss_pred cEEEEeecCCCC-CCeEEEEEeeeecccccccccc---cCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeec
Q 016363 28 LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWK---SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 103 (390)
Q Consensus 28 ~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~---g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~ 103 (390)
+++.+.+.|+|. +|||||||.++|||+.|..... +..... .+|.++|||++|+|+++|+++++|++||+|++..
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLA--PWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCC--CccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence 888999999874 9999999999999999864332 111112 4678999999999999999999999999997531
Q ss_pred ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcch----
Q 016363 104 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI---- 179 (390)
Q Consensus 104 ~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~---- 179 (390)
++|+||++++++.++++|+++++.+
T Consensus 101 ---------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~ 129 (345)
T cd08293 101 ---------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYF 129 (345)
T ss_pred ---------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHH
Confidence 2699999999999999999865433
Q ss_pred hhccccchhhHHHHHHHHhCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCC
Q 016363 180 ACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPA 255 (390)
Q Consensus 180 aa~~~~~~~tA~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~ 255 (390)
+++++++++|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|+++|+++++++++.+.+++ +|+++++++.
T Consensus 130 ~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~ 209 (345)
T cd08293 130 LGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK 209 (345)
T ss_pred hhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC
Confidence 456777899999998778888877 99999998 9999999999999998679999999999999876 9999999887
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC-CCcc----cc--hHhhhc--ceeE
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-SPIS----LN--SIEILK--GRSV 326 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~----~~--~~~~~~--~~~i 326 (390)
+ .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... .... +. ...+.. ++.+
T Consensus 210 ~---~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (345)
T cd08293 210 T---DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITR 284 (345)
T ss_pred C---CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEE
Confidence 6 67888898887669999999999876 78999999999 999999853211 1111 11 111222 3333
Q ss_pred EeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 327 CGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 327 ~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+....... ..+.+++++++++++++++. +...++++++++|++.+.+++.. |+++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 285 ERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 333221211 13457788899999988765 44567999999999999888765 999874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=280.96 Aligned_cols=324 Identities=24% Similarity=0.321 Sum_probs=266.8
Q ss_pred CCCCCCCccceeeEEEeecCCCC---cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeE
Q 016363 5 SASPKAGKVIRCKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 81 (390)
Q Consensus 5 ~~~~~~~~~~t~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G 81 (390)
+.++..-+|...|++++.+.|+| +++.++++|....++|+||.+|+.|||+|+..++|.++..+ ++|.+=|+|++|
T Consensus 9 ~~ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP-~~PAVgGnEGv~ 87 (354)
T KOG0025|consen 9 SSSSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRP-ELPAVGGNEGVG 87 (354)
T ss_pred ecccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCC-CCCcccCCcceE
Confidence 45566778999999999999987 88899999987777799999999999999999999998874 889999999999
Q ss_pred EEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeE
Q 016363 82 VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161 (390)
Q Consensus 82 ~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~ 161 (390)
+|+.+|+++++|++||+|+.... +.|+|++|.
T Consensus 88 eVv~vGs~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~ 119 (354)
T KOG0025|consen 88 EVVAVGSNVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEA 119 (354)
T ss_pred EEEEecCCcCccCCCCeEeecCC------------------------------------------------CCccceeeE
Confidence 99999999999999999986532 236999999
Q ss_pred EeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 162 VVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 162 ~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
+.+++.++++++.++++.||++.++.+|||.+|.+.-++.+||+|+--|+ +++|++.+|+|+++|+ +-|-+.|+...+
T Consensus 120 v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~i 198 (354)
T KOG0025|consen 120 VFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNI 198 (354)
T ss_pred eecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccH
Confidence 99999999999999999999999999999999999999999999888899 9999999999999999 888888888776
Q ss_pred HHH----HhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCccc
Q 016363 241 EIG----KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315 (390)
Q Consensus 241 ~~~----~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 315 (390)
+.+ +.+|+++|+...+..+.+..... ... .+...|+|+|+.. ...+.+.|.++ |..+.+|..+.. ..++
T Consensus 199 eel~~~Lk~lGA~~ViTeeel~~~~~~k~~---~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMSkq-Pv~~ 272 (354)
T KOG0025|consen 199 EELKKQLKSLGATEVITEEELRDRKMKKFK---GDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMSKQ-PVTV 272 (354)
T ss_pred HHHHHHHHHcCCceEecHHHhcchhhhhhh---ccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCccCC-Cccc
Confidence 655 45899999976553333322221 122 7899999999998 67788999998 999999966533 3344
Q ss_pred ch-HhhhcceeEEeeecCCCCch--------hhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc--eEEEE
Q 016363 316 NS-IEILKGRSVCGTYFGGLKPR--------SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCII 384 (390)
Q Consensus 316 ~~-~~~~~~~~i~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl 384 (390)
+. ..++++++++|+++..+... +.+.++.++++.|++... -+...+|++...|++...+.-. .|-++
T Consensus 273 ~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i 350 (354)
T KOG0025|consen 273 PTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALSKFGKSGKQII 350 (354)
T ss_pred ccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHHHhccCCceEE
Confidence 33 34677999999998877632 456788999999987754 3456789998888887654332 35555
Q ss_pred ec
Q 016363 385 WM 386 (390)
Q Consensus 385 ~~ 386 (390)
.+
T Consensus 351 ~~ 352 (354)
T KOG0025|consen 351 VL 352 (354)
T ss_pred Ee
Confidence 44
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=300.85 Aligned_cols=304 Identities=20% Similarity=0.239 Sum_probs=245.9
Q ss_pred eeeEEEeecC--CCC----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 15 RCKAAICRIP--GKP----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 15 t~~a~~~~~~--~~~----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
.||++++.+. +.+ +++.+.+.|+|++|||+|||.+++||+.|...... .. .+|.++|+|++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~--~~p~v~G~e~~G~V~~--- 73 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LN--EGDTMIGTQVAKVIES--- 73 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CC--CCCcEecceEEEEEec---
Confidence 4889999983 332 88999999999999999999999999987652211 11 4688999999999995
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT-- 166 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-- 166 (390)
.++.|++||+|++. ++|++|+.++.+
T Consensus 74 ~~~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~ 101 (329)
T cd08294 74 KNSKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQ 101 (329)
T ss_pred CCCCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccc
Confidence 44679999999753 268999999999
Q ss_pred -ceEEcCCCCC--c---chhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 167 -HVVKITPHIP--L---GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 167 -~v~~~p~~~~--~---~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
.++++|++++ + ..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus 102 ~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~ 180 (329)
T cd08294 102 PDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDK 180 (329)
T ss_pred cceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHH
Confidence 9999999998 2 2234678899999999888899999999999997 9999999999999999 89999999999
Q ss_pred HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC--c---c
Q 016363 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP--I---S 314 (390)
Q Consensus 240 ~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~---~ 314 (390)
.++++++|+++++++.+ .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|....... . .
T Consensus 181 ~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~ 255 (329)
T cd08294 181 VAWLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGP 255 (329)
T ss_pred HHHHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCc
Confidence 99999999999999876 68888888877668999999999855 89999999999 99999985322111 0 1
Q ss_pred -cchHhhhcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 315 -LNSIEILKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 315 -~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+....+.+++++.++...... ..+.+++++++++++++++. ...+|+++++++|++.+.+++.. |+++++
T Consensus 256 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 256 YVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred ccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 112223447788887544321 13457788999999988765 33579999999999999888765 999864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=300.45 Aligned_cols=291 Identities=22% Similarity=0.277 Sum_probs=237.2
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCC
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 107 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~ 107 (390)
|++.+.+.|+|++|||||||.++++|+.|.. |..... ..|.++|.|++|+|+++|+ +|++||+|++.
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~--~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~----- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK--EGDTMMGQQVARVVESKNV---ALPKGTIVLAS----- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC--CCCcEecceEEEEEEeCCC---CCCCCCEEEEe-----
Confidence 8889999999999999999999999996543 332222 3578999999999999874 59999999863
Q ss_pred CCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc----CCCCCcchh-hc
Q 016363 108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI----TPHIPLGIA-CL 182 (390)
Q Consensus 108 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~----p~~~~~~~a-a~ 182 (390)
++|++|+.++.+.+.++ |++++++++ ++
T Consensus 86 -----------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~ 118 (325)
T TIGR02825 86 -----------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGT 118 (325)
T ss_pred -----------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHh
Confidence 25899999999988887 899999997 67
Q ss_pred cccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcC
Q 016363 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 261 (390)
Q Consensus 183 ~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 261 (390)
++++++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++++ ..+
T Consensus 119 l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~ 195 (325)
T TIGR02825 119 VGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKS 195 (325)
T ss_pred cccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--ccc
Confidence 89999999999888899999999999997 9999999999999999 8999999999999999999999998765 125
Q ss_pred HHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCC---Cccc--chH-hhhcceeEEeeecCCCC
Q 016363 262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---PISL--NSI-EILKGRSVCGTYFGGLK 335 (390)
Q Consensus 262 ~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~~~~--~~~-~~~~~~~i~g~~~~~~~ 335 (390)
+.+.++..+++++|++||++|+.. ...++++++++ |+++.+|...... ..+. ... .+.+++++.++....+.
T Consensus 196 ~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 273 (325)
T TIGR02825 196 LEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQ 273 (325)
T ss_pred HHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhh
Confidence 666666665558999999999876 79999999999 9999998643211 1111 122 23347778777543321
Q ss_pred ---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 336 ---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 336 ---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
..+.++++++++++|++++. +...|+++++.+|++.+.+++.. |+|++
T Consensus 274 ~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 274 GEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 13568889999999988765 44679999999999999888765 98864
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-38 Score=297.97 Aligned_cols=327 Identities=28% Similarity=0.442 Sum_probs=270.7
Q ss_pred eEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCC
Q 016363 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER 96 (390)
Q Consensus 17 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 96 (390)
||+++.+++..+++.+.|.|.+.+++++|++.++++|+.|+..+.|..... .+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~~g~~~~~~~~G 78 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGS--KYPLVPGHEIVGEVVEVGAGVEGRKVG 78 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCC--CCCcccCccceEEEEEECCCCcccccC
Confidence 688999997669999999999999999999999999999999988866443 578899999999999999999999999
Q ss_pred CEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 97 DLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 97 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
|+|+..+. .+|++|.+|.++..+.|.+..+ +++... |+|++|+.++.+.++++|+++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~~ 136 (330)
T cd08245 79 DRVGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQ-------------------GGYAEYMVADAEYTVLLPDGL 136 (330)
T ss_pred CEEEEccccCCCCCChhhhCcCcccCcCccc---cCcccC-------------------CccccEEEEcHHHeEECCCCC
Confidence 99987543 6799999999999999988543 233222 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++.+++.+++.+.|||+++. ..+++++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 137 ~~~~~~~l~~~~~ta~~~l~-~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 214 (330)
T cd08245 137 PLAQAAPLLCAGITVYSALR-DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG 214 (330)
T ss_pred CHHHhhhhhhhHHHHHHHHH-hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccC
Confidence 99999999999999999884 4889999999999888899999999999999 899999999999999999998888765
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGL 334 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~ 334 (390)
. ...... ..+++|++||+++.......++++++++ |+++.+|..... ...+....+. ++.++.++..+.
T Consensus 215 ~---~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 284 (330)
T cd08245 215 A---ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG- 284 (330)
T ss_pred C---cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC-
Confidence 4 233222 2247999999988777689999999999 999999864322 2222223333 377787776543
Q ss_pred CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 335 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
...++.+++++.++.+.+ .+ +.|+++++++|++.+.++... |+++
T Consensus 285 --~~~~~~~~~ll~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 285 --RADLQEALDFAAEGKVKP--MI-ETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred --HHHHHHHHHHHHcCCCcc--eE-EEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 467888999999998764 24 789999999999999877765 7664
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=301.03 Aligned_cols=325 Identities=22% Similarity=0.274 Sum_probs=260.8
Q ss_pred eeEEEeecCCCC--cEEEE-eecCCCCCCeEEEEEeeeecccccccccccCCCC------------------CCCCCCcc
Q 016363 16 CKAAICRIPGKP--LVIEE-IEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------------------PKLPLPVI 74 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~------------------~~~~~p~~ 74 (390)
||++++.+++.+ +.+.+ .+.|++.+++|+|||.++++|++|+..+.|..+. ...++|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888877643 55544 4677789999999999999999999988775421 01257899
Q ss_pred cccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccc
Q 016363 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNI 154 (390)
Q Consensus 75 ~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~ 154 (390)
+|||++|+|+++|+++++|++||+|++.+..+|+.|..|.. |.. .|...+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~------~~~~~~------------------- 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY------IGSERD------------------- 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc------cCCCCC-------------------
Confidence 99999999999999999999999999988888888776432 211 111112
Q ss_pred cccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe
Q 016363 155 SSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 155 g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 233 (390)
|+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ...++++|++|||+|+ |++|++++++|+.+|+ +|+++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 4899999999999999999999999999999999999987 7889999999999998 9999999999999999 78888
Q ss_pred cCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC
Q 016363 234 DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312 (390)
Q Consensus 234 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 312 (390)
+++. +.+.++++|++.+++..+ ..+.+ .+.+.+ ++|++||++|+.. +..++++++++ |+++.+|.... ..
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~ 279 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAIAG-PV 279 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEecccCC-cc
Confidence 8665 888889999876665543 33333 445555 8999999999865 89999999999 99999985532 22
Q ss_pred cccchHh-hhcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 313 ISLNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 313 ~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+++... +.++.++.++.... .+.+.++++++.++++++ .+.+.|+++++++|++.+.++... |+++.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 280 VELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred ccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 3455554 34488888876543 567899999999998764 366899999999999999877665 988764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=288.29 Aligned_cols=314 Identities=18% Similarity=0.210 Sum_probs=259.3
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|||+++++++.+ +++.+.+.|.+.+++|+|++.++++|+.|+..+.|..+.. ...+|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999886653 6777777777899999999999999999999887754321 1256789999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|++... .. .|+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~~-------------------~g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG----------------------------RA-------------------GGGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC----------------------------CC-------------------CceeeEEEEEchHHeEeCC
Confidence 999999987531 00 1589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++.+++.+++.+.||| ++.+..+++++++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 5668889999999999997 9999999999999999 89999999999999999999888
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 329 (390)
++..+ .++.+.+.+++++ ++|+++|++|+.. ...++++++++ |+++.+|...... ..++... +.++.++.+.
T Consensus 192 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08244 192 VDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGL 265 (324)
T ss_pred EecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEe
Confidence 88766 6788888888777 8999999999887 78899999999 9999998654332 2444333 4448888877
Q ss_pred ecCCCCc---hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 330 YFGGLKP---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 330 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
....... .+.+.+++++++++++.. .+++.|+++++.+|++.+.++... |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 266 LGVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 6543321 356777889999997754 366899999999999999887765 998864
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=287.36 Aligned_cols=300 Identities=28% Similarity=0.449 Sum_probs=251.4
Q ss_pred eeEEEeecCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++++++ ..+++++++.|++.+++|+|||.++++|+.|++...+..... ..|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~ 78 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPV--ETPVVLGHEFSGTIVEVGPDVEGWK 78 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcC--CCCeeeccceEEEEEEECCCcCcCC
Confidence 5788888765 349999999999999999999999999999999888765333 4678999999999999999999999
Q ss_pred CCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+||+|++.+. .+|+.|++|..+.++.|..... +|.... |+|++|+.++.+.++++|+
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~lp~ 136 (306)
T cd08258 79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQAD-------------------GGFAEYVLVPEESLHELPE 136 (306)
T ss_pred CCCEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCC-------------------CceEEEEEcchHHeEECcC
Confidence 9999999775 6899999999999999976421 222222 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec--CChhhHHHHHhcCCcEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDF 251 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~~g~~~v 251 (390)
++++++++ ++..+++||+++....+++++++|||.|+|.+|++++|+|+.+|+ +|+++. +++++.+.++++|++++
T Consensus 137 ~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~ 214 (306)
T cd08258 137 NLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV 214 (306)
T ss_pred CCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc
Confidence 99999887 667889999998888999999999998779999999999999999 787763 34557888889999887
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 329 (390)
++.. .++.+.+.++.++ ++|++||++|+...+...+++|+++ |+++.+|.... ....++...+ .+++++.|+
T Consensus 215 -~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~ 288 (306)
T cd08258 215 -NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGS 288 (306)
T ss_pred -CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEE
Confidence 7665 7888888888776 8999999998766688999999999 99999997652 2244444444 459999999
Q ss_pred ecCCCCchhhHHHHHHHHHcC
Q 016363 330 YFGGLKPRSDIATLAQKYLDK 350 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~ 350 (390)
..+. .++++++++++++|
T Consensus 289 ~~~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 289 RSST---PASWETALRLLASG 306 (306)
T ss_pred ecCc---hHhHHHHHHHHhcC
Confidence 8765 57899999999875
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=291.20 Aligned_cols=314 Identities=19% Similarity=0.190 Sum_probs=256.8
Q ss_pred eeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 15 RCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 15 t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
+||++++.+++.+ |++.+++.|.|+++||+||+.++++|++|+....|..+.. .+|.++|+|++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~vG~~v~~ 78 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP--SLPSGLGTEAAGVVSKVGSGVKH 78 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC--CCCCccCcceEEEEEEeCCCCCC
Confidence 6899999988764 8888999999999999999999999999999888866544 56889999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|+.... ..|+|++|+.++.+.++++|
T Consensus 79 ~~~Gd~V~~~~~------------------------------------------------~~g~~~~~v~v~~~~~~~lp 110 (327)
T PRK10754 79 IKVGDRVVYAQS------------------------------------------------ALGAYSSVHNVPADKAAILP 110 (327)
T ss_pred CCCCCEEEECCC------------------------------------------------CCcceeeEEEcCHHHceeCC
Confidence 999999974210 01479999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++++++.+++.+++||.++.....+++|++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++++
T Consensus 111 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~ 189 (327)
T PRK10754 111 DAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQV 189 (327)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEE
Confidence 999999999988899999998877889999999999986 9999999999999999 89999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ce-----
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR----- 324 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~----- 324 (390)
++.+. .++.+.+++++++ ++|++|||+++.. ....+++++++ |+++.+|..... ...+....+.+ +.
T Consensus 190 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (327)
T PRK10754 190 INYRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTR 263 (327)
T ss_pred EcCCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEec
Confidence 88766 6788888888887 9999999999865 88899999999 999999865321 11222222222 11
Q ss_pred -eEEeeecCCC-CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 325 -SVCGTYFGGL-KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 325 -~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+.+.. ... ...+.+..++++++++++++.....+.|+++++.+|++.+.++... |+++.+
T Consensus 264 ~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 264 PSLQGYI-TTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred ceeeccc-CCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 111111 110 0112355688999999888655556899999999999999887765 999863
|
|
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=286.43 Aligned_cols=330 Identities=23% Similarity=0.301 Sum_probs=269.9
Q ss_pred eeEEEeecCC--CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPG--KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||++++..+ ..+++.+.+.|.++++|++|++.++++|++|+....|..+.. ..+|.++|||++|+|+++|+.++.|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP-VKDPLIPLSDGAGEVVAVGEGVTRF 79 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC-CCCCcccccceeEEEEEeCCCCcCC
Confidence 7899999764 338888888888899999999999999999999888765433 1478899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.....|+.|.+| .|....+ .|...+ |+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~------~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~ 131 (336)
T cd08276 80 KVGDRVVPTFFPNWLDGPPT------AEDEASA---LGGPID-------------------GVLAEYVVLPEEGLVRAPD 131 (336)
T ss_pred CCCCEEEEeccccccccccc------ccccccc---cccccC-------------------ceeeeEEEecHHHeEECCC
Confidence 99999999877666554443 3322111 222222 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++.+++.+++.+.+||+++.....+++|++|+|+|+|++|++++++++.+|+ +|+++++++++.+.++++|.+.+++
T Consensus 132 ~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 210 (336)
T cd08276 132 HLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVIN 210 (336)
T ss_pred CCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEc
Confidence 999999999999999999998788899999999999889999999999999999 8999999999999999999998887
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 331 (390)
... ..++.+.+.+++++ ++|++||+++... ...++++++++ |+++.+|....... ...... +.++.++.+...
T Consensus 211 ~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~ 285 (336)
T cd08276 211 YRT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGFEA-PVLLLPLLTKGATLRGIAV 285 (336)
T ss_pred CCc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCCcc-CcCHHHHhhcceEEEEEec
Confidence 643 24677888888887 9999999998665 88999999999 99999996543322 222233 455888888875
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+. .+.+.+++++++++.+.+. ..+.|++++++++++.+.++... |++++
T Consensus 286 ~~---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 286 GS---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred Cc---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 54 4678889999998876643 45889999999999999877665 88875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=291.11 Aligned_cols=308 Identities=18% Similarity=0.204 Sum_probs=246.7
Q ss_pred eEEEeecC---CCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 17 KAAICRIP---GKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 17 ~a~~~~~~---~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
||+++.++ +++ ++..++|.|+|+++||+|||+++++|+.|+..+.+..+.. .+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~ 78 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA--GQPKILGWDAAGVVVAVGDEVT 78 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC--CCCcccceeeEEEEEEeCCCCC
Confidence 56777776 443 7888889999999999999999999999999887765433 5788999999999999999999
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
.|++||+|+.... .. ..|+|++|+.++.+.++++
T Consensus 79 ~~~~Gd~V~~~~~---------------------------~~-------------------~~g~~~~~~~v~~~~~~~i 112 (336)
T TIGR02817 79 LFKPGDEVWYAGD---------------------------ID-------------------RPGSNAEFHLVDERIVGHK 112 (336)
T ss_pred CCCCCCEEEEcCC---------------------------CC-------------------CCCcccceEEEcHHHcccC
Confidence 9999999986320 00 1158999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHH
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~ 244 (390)
|+++++++++.+++++.|||+++....++++ |++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++
T Consensus 113 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~ 191 (336)
T TIGR02817 113 PKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVL 191 (336)
T ss_pred CCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHH
Confidence 9999999999999999999999888888887 999999997 99999999999998 99 9999999999999999
Q ss_pred hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-c
Q 016363 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-G 323 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~ 323 (390)
++|+++++++.. ++.+.+.++.++++|+|+|++++.......+++++++ |+++.++.. . .++...+.. +
T Consensus 192 ~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~--~~~~~~~~~~~ 261 (336)
T TIGR02817 192 ELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---A--ELDISPFKRKS 261 (336)
T ss_pred HcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---c--cccchhhhhcc
Confidence 999999997644 5777787754448999999987666688999999999 999988522 1 222222332 4
Q ss_pred eeEEeeecCC--CCc-------hhhHHHHHHHHHcCCCCCccceeeee---ccccHHHHHHHHhcCCce-EEEEe
Q 016363 324 RSVCGTYFGG--LKP-------RSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 324 ~~i~g~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
..+.+..+.. ... ...++++++++.++.+++. +++.+ +++++++|++.+.++... |++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 262 ISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred eEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 5555433221 100 1457889999999977643 33444 478999999999888765 88864
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=291.63 Aligned_cols=314 Identities=23% Similarity=0.303 Sum_probs=258.2
Q ss_pred eeEEEeecCCCC---cEEEEeecCCCCC-CeEEEEEeeeecccccccccccCCCCCCC---CCCcccccceeEEEEEeCC
Q 016363 16 CKAAICRIPGKP---LVIEEIEVEPPKA-WEIRIKILCTSLCHSDVTFWKSSTDLPKL---PLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 16 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~~~~~---~~p~~~G~e~~G~V~~vG~ 88 (390)
|||+++.+++.+ +.+.+.|.|+|.+ ++|+||+.++++|+.|+..+.|..+.... ..|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999998875 8999999998887 99999999999999999998886543210 1677999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
+++.|++||+|++... ..|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence 9999999999986421 0158999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh----hhHHHH
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIG 243 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~----~~~~~~ 243 (390)
+++|+++++++++.+++.++|||+++.....+++|++|||+|+ |++|++++|+|+++|+ +|+++++++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999877788999999999998 9999999999999999 888888776 678888
Q ss_pred HhcCCcEEEcCCCCCCc---CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-
Q 016363 244 KKFGITDFINPATCGDK---TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE- 319 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~---~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~- 319 (390)
+++|+++++++.. . ++...+.++.++++|++|||+|+.. ....+++++++ |+++.+|..... ...++...
T Consensus 192 ~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~ 265 (341)
T cd08290 192 KALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLL 265 (341)
T ss_pred HhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHH
Confidence 8899999998765 3 6777777776558999999999876 77889999999 999999854322 23344433
Q ss_pred hhcceeEEeeecCCCC-------chhhHHHHHHHHHcCCCCCccceeeee---ccccHHHHHHHHhcCCce-EEEEec
Q 016363 320 ILKGRSVCGTYFGGLK-------PRSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 320 ~~~~~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+.++.++.+....... ....+..+++++.++++.+. ....+ +++++.+|++.+.++... |+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 266 IFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred hhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 4558888887654321 11357788899999987754 33556 999999999999877765 998864
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=286.85 Aligned_cols=315 Identities=21% Similarity=0.254 Sum_probs=259.1
Q ss_pred eeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 15 RCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 15 t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
||||+++.+++.. +++.+.+.|++.++|++|||.++++|+.|+....|..+.. ...|.++|+|++|+|+++|++++.
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~ 79 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPP-PGSSEILGLEVAGYVEDVGSDVKR 79 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccceeeEEEEEEeCCCCCC
Confidence 7999999988753 7777878888999999999999999999999887755332 145678999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|++... .|+|++|+.++.+.++++|
T Consensus 80 ~~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~v~~~~~~~ip 110 (334)
T PTZ00354 80 FKEGDRVMALLP-------------------------------------------------GGGYAEYAVAHKGHVMHIP 110 (334)
T ss_pred CCCCCEEEEecC-------------------------------------------------CCceeeEEEecHHHcEeCC
Confidence 999999986421 1489999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++.+++.+++++.|||+++.....+++|++|+|+|+ |++|++++++|+.+|+ +++++++++++.+.++++|++.+
T Consensus 111 ~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 189 (334)
T PTZ00354 111 QGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIIL 189 (334)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEE
Confidence 999999999999999999999877789999999999997 9999999999999999 77888999999999999999888
Q ss_pred EcCCCCCCcC-HHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcc-cchHhhhc-ceeEE
Q 016363 252 INPATCGDKT-VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK-GRSVC 327 (390)
Q Consensus 252 ~~~~~~~~~~-~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~-~~~i~ 327 (390)
++... .+ +.+.+.+++++ ++|++||++++.. +..++++++++ |+++.+|..... ... ++...+.. +.++.
T Consensus 190 ~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (334)
T PTZ00354 190 IRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGGA-KVEKFNLLPLLRKRASII 263 (334)
T ss_pred EecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCCC-cccccCHHHHHhhCCEEE
Confidence 88755 44 77888888876 9999999998765 88999999999 999999854322 222 44443333 55777
Q ss_pred eeecCCCCc-------hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 328 GTYFGGLKP-------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 328 g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
++....... .+.+++++++++++.+++. +.+.+++++++++++.+.++... |+++.+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 264 FSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred eeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 775543221 1234678889999977643 66889999999999998877655 99997653
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=287.60 Aligned_cols=312 Identities=23% Similarity=0.261 Sum_probs=257.0
Q ss_pred eeeEEEeecCCC----CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 15 RCKAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 15 t~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
+|||+++.+++. ++++++.+.|.+.++|++|||.++++|+.|+....|..... ..+|.++|+|++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~p~~~g~e~~G~v~~vG~~v 79 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-VKPPFDCGFEGVGEVVAVGEGV 79 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC-CCCCcccCceeEEEEEEECCCC
Confidence 589999998765 48999999999999999999999999999999887765432 1578899999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+.+++||+|++... |+|++|+.++.+.+++
T Consensus 80 ~~~~~Gd~V~~~~~--------------------------------------------------g~~~s~~~v~~~~~~~ 109 (329)
T cd08250 80 TDFKVGDAVATMSF--------------------------------------------------GAFAEYQVVPARHAVP 109 (329)
T ss_pred CCCCCCCEEEEecC--------------------------------------------------cceeEEEEechHHeEE
Confidence 99999999986421 4899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
+|++ +.+++.+++++.|||+++.+..++++|++|+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++
T Consensus 110 ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~ 186 (329)
T cd08250 110 VPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCD 186 (329)
T ss_pred CCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCc
Confidence 9997 45677888999999999877789999999999997 9999999999999999 899999999999999999998
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC---------CCcccchHhh
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---------SPISLNSIEI 320 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---------~~~~~~~~~~ 320 (390)
.+++... .++.+.+.+..++++|++||++|+.. +..++++++++ |+++.+|..... ....+....+
T Consensus 187 ~v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 261 (329)
T cd08250 187 RPINYKT---EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLL 261 (329)
T ss_pred eEEeCCC---ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHh
Confidence 8887665 56777776665458999999999755 88999999999 999999865422 1112333334
Q ss_pred hcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 321 LKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 321 ~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
.++.++.++...... ..+.+.+++++++++.+++.....+.++++++++|++.+.++... |++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 262 AKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred hcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 558888887644321 235577889999999877644344679999999999999887765 88864
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=282.17 Aligned_cols=313 Identities=19% Similarity=0.205 Sum_probs=246.5
Q ss_pred eeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||++++++++ ++++.+.|.|.+++++|+|++.++++|++|+..+.|..+.. ..+|.++|||++|+|+++ +++.|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~--~~~~~ 77 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVT-RNYPHTPGIDAAGTVVSS--DDPRF 77 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCC-CCCCCccCcccEEEEEEe--CCCCC
Confidence 78999999986 69999999999999999999999999999999988875432 146789999999999999 45789
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... ..|+..+ |+|++|+.++++.++++|+
T Consensus 78 ~~Gd~V~~~~~------------------------~~g~~~~-------------------g~~~~~~~v~~~~~~~lp~ 114 (325)
T cd05280 78 REGDEVLVTGY------------------------DLGMNTD-------------------GGFAEYVRVPADWVVPLPE 114 (325)
T ss_pred CCCCEEEEccc------------------------ccCCCCC-------------------ceeEEEEEEchhhEEECCC
Confidence 99999987521 0122222 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhC--CC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAG--VE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~--~~-~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
++++.+++.+++.+.|||+++....+ +. .+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~ 193 (325)
T cd05280 115 GLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGAS 193 (325)
T ss_pred CCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCc
Confidence 99999999999999999998755443 35 4579999998 9999999999999999 899999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEE
Q 016363 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVC 327 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~ 327 (390)
++++..+ . ...+.+...+ ++|+|||++++.. +..++++++++ |+++.+|...... ..++...+ .++.++.
T Consensus 194 ~~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~ 265 (325)
T cd05280 194 EVLDRED---L--LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGPE-LTTTVLPFILRGVSLL 265 (325)
T ss_pred EEEcchh---H--HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCCc-cccccchheeeeeEEE
Confidence 9887654 2 2233333344 8999999999865 99999999999 9999999654322 23444444 4588888
Q ss_pred eeecCCCCc---hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 328 GTYFGGLKP---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 328 g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+........ .+.++.+.+++..+... .+..+|+++++++|++.+.++... |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 266 GIDSVNCPMELRKQVWQKLATEWKPDLLE---IVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred EEEeecCchhHHHHHHHHHHHHHhcCCcc---ceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 876543321 12334455555555222 266899999999999999888766 988864
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=278.19 Aligned_cols=304 Identities=22% Similarity=0.344 Sum_probs=246.7
Q ss_pred ecCCCCcEEEEeecCCCCCCeEEEEEeeeeccccccccc-ccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEe
Q 016363 22 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 100 (390)
Q Consensus 22 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~ 100 (390)
++++. +++.+++.|++.++||+|++.++++|+.|+..+ .|.........|.++|+|++|+|+++|++++.+++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34444 899999999999999999999999999999887 6653222113578999999999999999999999999998
Q ss_pred eecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchh
Q 016363 101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180 (390)
Q Consensus 101 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~a 180 (390)
.... |+|++|+.++.+.++++|+++ ..+
T Consensus 81 ~~~~--------------------------------------------------g~~~~~~~v~~~~~~~lP~~~--~~~ 108 (312)
T cd08269 81 GLSG--------------------------------------------------GAFAEYDLADADHAVPLPSLL--DGQ 108 (312)
T ss_pred EecC--------------------------------------------------CcceeeEEEchhheEECCCch--hhh
Confidence 7532 489999999999999999998 233
Q ss_pred hccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCc
Q 016363 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
+....++++||+++. ..+++++++|+|+|+|.+|++++++|+.+|+++|+++++++++.++++++|++.+++.+. .
T Consensus 109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~ 184 (312)
T cd08269 109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---E 184 (312)
T ss_pred HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---c
Confidence 322367889998874 888999999999988999999999999999933999999999999999999988887665 6
Q ss_pred CHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeecCCCC-ch
Q 016363 261 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLK-PR 337 (390)
Q Consensus 261 ~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~-~~ 337 (390)
++.+.+.+++++ ++|++|||+|+...+...+++++++ |+++.+|... .....+++.. ..++..+.++...... ..
T Consensus 185 ~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (312)
T cd08269 185 AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGL 262 (312)
T ss_pred CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchh
Confidence 788888888877 9999999998877689999999999 9999998653 2233344333 3347777666433321 24
Q ss_pred hhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc--eEEEE
Q 016363 338 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCII 384 (390)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl 384 (390)
+.+++++++++++++++...+.+.|+++++++|++.+.++.. +|+++
T Consensus 263 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 263 EGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred hHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 678999999999988865556688999999999999988754 48886
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=284.41 Aligned_cols=315 Identities=25% Similarity=0.311 Sum_probs=250.4
Q ss_pred eeEEEeecCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||++++.++ ..+++.+++.|.|+++||+|++.++++|++|+....+.. .. ..|.++|+|++|+|+.+|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~--~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IP--SYPAILGCDFAGTVVEVGSGVTRFK 77 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-cc--CCCceeeeeeeEEEEEeCCCcCcCC
Confidence 6899999985 338899999999999999999999999999999876654 11 3567899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.....|+ +.. ..|+|++|+.++.+.++++|++
T Consensus 78 ~Gd~V~~~~~~~~~----------------------~~~-------------------~~g~~~~~~~v~~~~~~~ip~~ 116 (339)
T cd08249 78 VGDRVAGFVHGGNP----------------------NDP-------------------RNGAFQEYVVADADLTAKIPDN 116 (339)
T ss_pred CCCEEEEEeccccC----------------------CCC-------------------CCCcccceEEechhheEECCCC
Confidence 99999987543221 001 1258999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGV----------EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~----------~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
+++.+++.+++.+.|||+++.+..++ +++++|||+|+ |.+|++++++|+.+|+ +|++++ ++++.+.+
T Consensus 117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~ 194 (339)
T cd08249 117 ISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLV 194 (339)
T ss_pred CCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHH
Confidence 99999999999999999988666554 78999999998 9999999999999999 888888 66899999
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhcc--CCceEEEEcccCCCCCcccchHhhh
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE--GWGKTVILGVEMHGSPISLNSIEIL 321 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~ 321 (390)
+++|++++++..+ .++.+.+++++++++|++||++|++..+..+++++++ + |+++.+|...... .+... .
T Consensus 195 ~~~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~~~~--~ 266 (339)
T cd08249 195 KSLGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EPRKG--V 266 (339)
T ss_pred HhcCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cCCCC--c
Confidence 9999999998876 6788888877766999999999985558999999999 8 9999998654321 11100 0
Q ss_pred cceeEEeeecC------CCCchhhHHHHHHHHHcCCCCCccceeeeec--cccHHHHHHHHhcCC-ce-EEEEec
Q 016363 322 KGRSVCGTYFG------GLKPRSDIATLAQKYLDKELNLGEFITHEVS--FHDINKAFDLLLEGK-SL-RCIIWM 386 (390)
Q Consensus 322 ~~~~i~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--l~~~~~A~~~~~~~~-~~-kvvl~~ 386 (390)
....+...... .......+..++++++++++.+. ....++ ++++++|++.+..+. .. |+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 267 KVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred eEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 11111111111 11123457788999999988865 335667 999999999998887 65 999864
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=280.70 Aligned_cols=299 Identities=22% Similarity=0.265 Sum_probs=253.2
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCC
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 107 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~ 107 (390)
+.+.+.+.|++.+++|+|||.++++|+.|+..+.+..... ..+|.++|+|++|+|+.+|++++.+++||+|++.+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSR-PPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG--- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCC-CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC---
Confidence 5666778888999999999999999999999887765432 146789999999999999999999999999987531
Q ss_pred CCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccch
Q 016363 108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187 (390)
Q Consensus 108 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 187 (390)
.|+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus 90 ----------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~ 123 (323)
T cd05282 90 ----------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINP 123 (323)
T ss_pred ----------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccH
Confidence 1489999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHH
Q 016363 188 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 188 ~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
++||+++.....+.+|++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.++++.. .++...+
T Consensus 124 ~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~ 199 (323)
T cd05282 124 LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRV 199 (323)
T ss_pred HHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHH
Confidence 999999888888999999999998 9999999999999999 8999999999999999999999998765 5788888
Q ss_pred HhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCCCCc-------h
Q 016363 267 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKP-------R 337 (390)
Q Consensus 267 ~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~ 337 (390)
.+++++ ++|++|||+|+.. ....+++++++ |+++.+|..... ...++...+. ++.++.+.....+.. .
T Consensus 200 ~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (323)
T cd05282 200 KEATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQ 276 (323)
T ss_pred HHHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHH
Confidence 888877 9999999999977 67889999999 999999865443 3445555555 688888876554321 2
Q ss_pred hhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 338 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+.+.++++++.++++.+. +++.|+++++++|++.+.++... |++++
T Consensus 277 ~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 277 ETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 457778899999987653 56889999999999999887665 88763
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=277.16 Aligned_cols=297 Identities=20% Similarity=0.277 Sum_probs=244.2
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++.+.+ | +++.+.+.|.++++|++||+.++++|+.|++...+. ..|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~~~ 73 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGSGP 73 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCCCC
Confidence 5888888754 3 777788889999999999999999999999876521 235689999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... .|+|++|+.++.+.++++|+
T Consensus 74 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~v~~~~~~~ip~ 104 (305)
T cd08270 74 AVGARVVGLGA-------------------------------------------------MGAWAELVAVPTGWLAVLPD 104 (305)
T ss_pred CCCCEEEEecC-------------------------------------------------CcceeeEEEEchHHeEECCC
Confidence 99999986421 15899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++++++.+++.+.|||+++...... +|++|+|+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++.++
T Consensus 105 ~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 182 (305)
T cd08270 105 GVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVV 182 (305)
T ss_pred CCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 999999999999999999988655545 5999999998 9999999999999999 899999999999999999987665
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc---ceeEEee
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK---GRSVCGT 329 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~---~~~i~g~ 329 (390)
+... ++.++++|+++|++|+.. +..++++++.+ |+++.+|... .....++...+.. +.++.++
T Consensus 183 ~~~~-----------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (305)
T cd08270 183 VGGS-----------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTF 248 (305)
T ss_pred eccc-----------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEE
Confidence 4322 122347999999999875 89999999999 9999999654 2233344444444 7788887
Q ss_pred ecCC-CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 330 YFGG-LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 330 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+.. ....+.+..++++++++++++. +.++++++++++|++.+.++... |+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 249 FLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred EccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 6553 1124568889999999988754 66899999999999999877765 998864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=282.22 Aligned_cols=303 Identities=23% Similarity=0.328 Sum_probs=230.4
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCC--CCCCcccccceeEEEE---EeC-CCCCcCCCCCEEee
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--LPLPVIFGHEAVGVVE---SVG-EYVEEVKERDLVLP 101 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~G~V~---~vG-~~v~~~~vGd~V~~ 101 (390)
....+.++|.|.+++++|++.++++|+.|+.+..|...... .++|.+++.++.|.+. .+| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 45568899999999999999999999999999998776552 2467555555555533 333 22233444444433
Q ss_pred ecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhh
Q 016363 102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181 (390)
Q Consensus 102 ~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa 181 (390)
. ...|+|+||+++|...++++|+++++.+||
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 223689999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHh------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 182 LLSCGVSTGVGAAWKVA------GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~------~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
.+|.++.|||.++.... ++++|++|||+|+ |++|++++|+|+..++ ..++++.++++.++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999998889 8999999999987 9999999999999996 56666779999999999999999999
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCC-Ccccc-hHhhhcceeEEeee--
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS-PISLN-SIEILKGRSVCGTY-- 330 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~-~~~~~~~~~i~g~~-- 330 (390)
++ .++.+.+++.+++++|+||||+|+.. ......++... |+...++...... ..... .......+.+....
T Consensus 210 ~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
T KOG1198|consen 210 KD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLK 284 (347)
T ss_pred CC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeee
Confidence 98 89999999988449999999999976 77777888877 6644555332110 11110 00001111111111
Q ss_pred ------cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 331 ------FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 331 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
.......+.+..+.++++++++.+ .+++.||++++.+|++++..+... |++++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~ie~gkikp--~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 285 GVNYRWLYFVPSAEYLKALVELIEKGKIKP--VIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred ccceeeeeecCCHHHHHHHHHHHHcCcccC--CcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 111223577889999999995554 488999999999999999887665 9999875
|
|
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=275.65 Aligned_cols=311 Identities=21% Similarity=0.313 Sum_probs=250.8
Q ss_pred eeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++...+. .+++.+.+.|.+.++|++||+.++++|+.|+....+..+.. ..|.++|||++|+|+++|+ ..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~vG~--~~~ 76 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV--KFPRVLGIEAVGEVEEAPG--GTF 76 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCccccceeEEEEEEecC--CCC
Confidence 68888887764 26777777778899999999999999999999988865433 5688999999999999995 579
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.... .+...+ |+|++|+.++.+.++++|+
T Consensus 77 ~~Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~~~~~~~~~ip~ 113 (320)
T cd08243 77 TPGQRVATAMGG------------------------MGRTFD-------------------GSYAEYTLVPNEQVYAIDS 113 (320)
T ss_pred CCCCEEEEecCC------------------------CCCCCC-------------------cccceEEEcCHHHcEeCCC
Confidence 999999876320 111111 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++++++.+++++.|||+++.+...+++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|+++++
T Consensus 114 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 192 (320)
T cd08243 114 DLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVV 192 (320)
T ss_pred CCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEE
Confidence 99999999999999999999878788999999999998 9999999999999999 899999999999999999998887
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCc-ccchHh---hhcceeEEe
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIE---ILKGRSVCG 328 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~---~~~~~~i~g 328 (390)
+. . .++.+.+.++ ++++|++||++|+.. ....+++++++ |+++.+|........ ...... +.++..+.+
T Consensus 193 ~~-~---~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (320)
T cd08243 193 ID-D---GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTG 265 (320)
T ss_pred ec-C---ccHHHHHHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEe
Confidence 54 3 4677788877 449999999999865 88999999999 999999964322111 111222 234667766
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
....... ...+..++++++++.+.+. ..+.|+++++++|++.+.++... |+++
T Consensus 266 ~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 266 SSSGDVP-QTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred cchhhhh-HHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 6533221 3467889999999977643 55889999999999999877665 7775
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=259.93 Aligned_cols=298 Identities=20% Similarity=0.227 Sum_probs=242.2
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC--CCCCcCCCCCEEeeeccc
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG--EYVEEVKERDLVLPIFHR 105 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~vGd~V~~~~~~ 105 (390)
|+++++++|+|++||||+|++|.|++|.-...+ +..+.. -.|.-+|-..+|.++... |....|++||.|++..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm-~d~~SY--~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~-- 101 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRM-SDAPSY--APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS-- 101 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecc-cCCccc--CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc--
Confidence 999999999999999999999999999533222 222222 235666766655544432 4567899999998752
Q ss_pred CCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC-Ccch-hhcc
Q 016363 106 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-PLGI-ACLL 183 (390)
Q Consensus 106 ~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~-~~~~-aa~~ 183 (390)
+|++|.+++.+.+.+++++. ++.. ...+
T Consensus 102 --------------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvL 131 (340)
T COG2130 102 --------------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVL 131 (340)
T ss_pred --------------------------------------------------cceEEEeechhhceecCCCCCCcchHHhhc
Confidence 79999999999999998653 2222 2337
Q ss_pred ccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcC
Q 016363 184 SCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKT 261 (390)
Q Consensus 184 ~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~ 261 (390)
.++..|||.+|.+..+.++|++|+|.+| |++|..+.|+||..|+ +||+++.+++|.+++++ +|.|.++||+. ++
T Consensus 132 GmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d 207 (340)
T COG2130 132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---ED 207 (340)
T ss_pred CCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---cc
Confidence 8899999999999999999999999998 9999999999999999 99999999999999988 99999999998 89
Q ss_pred HHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC--CCcccc----hHhhhcceeEEeeecCCCC
Q 016363 262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG--SPISLN----SIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 262 ~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~--~~~~~~----~~~~~~~~~i~g~~~~~~~ 335 (390)
+.+.+.+..++|+|+.||++|++. +...+..|+.. +|++.||.-+.- ...+.. +..+.+.+++.|+-.....
T Consensus 208 ~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~ 285 (340)
T COG2130 208 FAQALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDY 285 (340)
T ss_pred HHHHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhh
Confidence 999999999999999999999998 99999999999 999999964321 112222 2223347788888663322
Q ss_pred ---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 336 ---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 336 ---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
..+..+++..|+++||++... +-+-.||++++||..+.+++++ |+|+++.+
T Consensus 286 ~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 286 DQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 236788999999999999885 4466799999999999999997 99999764
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=275.38 Aligned_cols=315 Identities=15% Similarity=0.191 Sum_probs=240.5
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++.+++++ +.+.+.+.|.|+++||+||+.++++|++|.....+..... ..+|.++|||++|+|+++| +++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~V~~~~--~~~~ 77 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIV-KRYPFIPGIDLAGTVVESN--DPRF 77 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCcccc-CCCCcCcccceeEEEEEcC--CCCC
Confidence 789999988764 7888999999999999999999999999987664322111 1468899999999999965 4779
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|+..+.. .|.... |+|++|+.++++.++++|+
T Consensus 78 ~~Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~v~~~~~~~~p~ 114 (326)
T cd08289 78 KPGDEVIVTSYD------------------------LGVSHH-------------------GGYSEYARVPAEWVVPLPK 114 (326)
T ss_pred CCCCEEEEcccc------------------------cCCCCC-------------------CcceeEEEEcHHHeEECCC
Confidence 999999875320 121112 5899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHh--C-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVA--G-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~--~-~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
++++++++.+++.+.|||+++.... . ...+++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++
T Consensus 115 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~ 193 (326)
T cd08289 115 GLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAK 193 (326)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCC
Confidence 9999999999999999998875433 3 345789999998 9999999999999999 899999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEe
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 328 (390)
.+++.++ . ..+.+.++.++++|++||++|+.. ....+++++++ |+++.+|.... ...++....+ .++.++.+
T Consensus 194 ~v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~ 266 (326)
T cd08289 194 EVIPREE---L-QEESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLG 266 (326)
T ss_pred EEEcchh---H-HHHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEE
Confidence 9888765 2 345566664448999999999855 89999999999 99999996532 2233333334 45888888
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCC---CccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELN---LGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
....... ......+++.+.+ .+. ....+.++|+++++.+|++.+.++... |+++++
T Consensus 267 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 267 IDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred EEeEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 7532211 0112233333322 122 122356999999999999999888776 988764
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=273.35 Aligned_cols=311 Identities=17% Similarity=0.204 Sum_probs=245.4
Q ss_pred eEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||+++...+.+ +++++.|+|.+++++|+||+.++++|+.|+..+.|..... ..+|.++|||++|+|+. +++..|+
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~--~~~~~~~ 77 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVV-RSYPMIPGIDAAGTVVS--SEDPRFR 77 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCC-CCCCccceeeeEEEEEe--cCCCCCC
Confidence 68888887764 7899999999999999999999999999999888865332 15688999999999998 5567899
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.... .|...+ |+|++|+.++.+.++++|++
T Consensus 78 ~Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~~~~~~~~~iP~~ 114 (323)
T TIGR02823 78 EGDEVIVTGYG------------------------LGVSHD-------------------GGYSQYARVPADWLVPLPEG 114 (323)
T ss_pred CCCEEEEccCC------------------------CCCCCC-------------------ccceEEEEEchhheEECCCC
Confidence 99999875310 111112 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHH--hCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKV--AGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~--~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+++.+++.+++.+.+||.++... .++.+|+ +|+|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++.
T Consensus 115 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 193 (323)
T TIGR02823 115 LSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASE 193 (323)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcE
Confidence 99999999999999998876433 3488999 9999998 9999999999999999 8998888899999999999988
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 329 (390)
+++.++ .+. .++.+.++++|+++||+|+.. +..++++++++ |+++.+|.... ...+.+...+ .++.++.+.
T Consensus 194 ~~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (323)
T TIGR02823 194 VIDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGI 265 (323)
T ss_pred EEcccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEE
Confidence 887654 222 455555557999999999875 88999999999 99999996532 2233333334 558888886
Q ss_pred ecCCCCc---hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 330 YFGGLKP---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 330 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
....... .+.+..+.+++..++++. .+ +.|+++++++|++.+.++... |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 266 DSVYCPMALREAAWQRLATDLKPRNLES--IT-REITLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred eccccCchhHHHHHHHHHHHhhcCCCcC--ce-eeecHHHHHHHHHHHhCCCccceEEEe
Confidence 5432211 223556666777776543 24 689999999999999888776 98875
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=274.86 Aligned_cols=312 Identities=21% Similarity=0.207 Sum_probs=251.8
Q ss_pred eeEEEeecCCCC-----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 16 CKAAICRIPGKP-----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 16 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
|||+++.+++++ +++.+++.|++.+++++|++.++++|+.|+..+.+..+.. ..|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~v 78 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVP--GQPKILGWDASGVVEAVGSEV 78 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCC--CCCcccccceEEEEEEcCCCC
Confidence 589999998863 5666777888899999999999999999999887765433 467789999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+.|++||+|+.... ... .|+|++|+.++.+.+++
T Consensus 79 ~~~~~Gd~V~~~~~---------------------------~~~-------------------~g~~~~~~~v~~~~~~~ 112 (336)
T cd08252 79 TLFKVGDEVYYAGD---------------------------ITR-------------------PGSNAEYQLVDERIVGH 112 (336)
T ss_pred CCCCCCCEEEEcCC---------------------------CCC-------------------CccceEEEEEchHHeee
Confidence 99999999986421 001 14899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEecCChhhHHHH
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIG 243 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~ 243 (390)
+|+++++++++.+++.+.|||+++.+.+++++ |++|+|+|+ |++|++++++|+.+| + +|+++++++++.+.+
T Consensus 113 ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~ 191 (336)
T cd08252 113 KPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWV 191 (336)
T ss_pred CCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHH
Confidence 99999999999999999999999878888888 999999997 999999999999999 7 999999999999999
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hc
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LK 322 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~ 322 (390)
+++|++++++... ++.+.+.....+++|++||++|+...+..++++++.+ |+++.+|... ..++...+ .+
T Consensus 192 ~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~ 262 (336)
T cd08252 192 KELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSK 262 (336)
T ss_pred HhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcc
Confidence 9999999887653 5666666443348999999999766689999999999 9999998542 23333334 35
Q ss_pred ceeEEeeecCCC---------CchhhHHHHHHHHHcCCCCCccc-eeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 323 GRSVCGTYFGGL---------KPRSDIATLAQKYLDKELNLGEF-ITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 323 ~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+.++.+..+... ...+.+.++++++.++.+++... ..+.++++++++|++.+.++... |++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 263 SASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred cceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 777776544321 11245778999999998775321 12458999999999999887766 88764
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=267.31 Aligned_cols=316 Identities=22% Similarity=0.287 Sum_probs=257.6
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||+++++.++.+ +.+.+.+.|.+.+++++|++.++++|++|+....|..... ..+|.++|||++|+|+.+|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGL-PPLPYVPGSDGAGVVEAVGEGVDGL 79 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCC-CCCCeecccceEEEEEeeCCCCCCC
Confidence 578888876543 8888888888999999999999999999999887765432 2578899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.... ... ..|++++|+.++.+.++++|+
T Consensus 80 ~~Gd~v~~~~~~--------------------------~~~------------------~~g~~~~~~~~~~~~~~~ip~ 115 (325)
T cd08253 80 KVGDRVWLTNLG--------------------------WGR------------------RQGTAAEYVVVPADQLVPLPD 115 (325)
T ss_pred CCCCEEEEeccc--------------------------cCC------------------CCcceeeEEEecHHHcEeCCC
Confidence 999999876420 000 014799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++++.+||+++....++.+|++|+|+|+ |++|++++++++..|+ +|+++++++++.+.+.++|++.++
T Consensus 116 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 194 (325)
T cd08253 116 GVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVF 194 (325)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999999877799999999999997 9999999999999999 899999999999999999998888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 330 (390)
+... .++.+.+.+++.+ ++|++++++++.. ....+++++.+ |+++.+|... ....++... +.++.++.+..
T Consensus 195 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd08253 195 NYRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVL 267 (325)
T ss_pred eCCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeee
Confidence 7765 6787888887766 8999999999876 78889999999 9999998654 222333343 34477777665
Q ss_pred cCCCC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
..... ..+.+..+.+++.++.+++. .++.|++++++++++.+.++... |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 268 LYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred hhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 43321 12345566677888866543 56889999999999999877665 888753
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=264.15 Aligned_cols=309 Identities=24% Similarity=0.281 Sum_probs=252.6
Q ss_pred eEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||+.+..++.+ +.+.+.+.+.+.+++++|+|.++++|+.|+....+..+. .+|.++|||++|+|+.+|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~---~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLPFVLGVEGAGVVEAVGPGVTGFK 77 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC---CCCccCCcceeEEEEEECCCCCCCC
Confidence 45666655543 667677777789999999999999999999988775432 3577899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++... .|+|++|+.++.+.++++|++
T Consensus 78 ~G~~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 108 (320)
T cd05286 78 VGDRVAYAGP-------------------------------------------------PGAYAEYRVVPASRLVKLPDG 108 (320)
T ss_pred CCCEEEEecC-------------------------------------------------CCceeEEEEecHHHceeCCCC
Confidence 9999986420 147999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+++.+++.+++...++|+++.+..++++|++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++.+++
T Consensus 109 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 187 (320)
T cd05286 109 ISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVIN 187 (320)
T ss_pred CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEe
Confidence 9999999999999999999888899999999999997 9999999999999999 8999999999999999999988887
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
... .++.+.+.+++.+ ++|++|+|+++.. ...++++++++ |+++.+|..... ...++...+ .++.++.+...
T Consensus 188 ~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 261 (320)
T cd05286 188 YRD---EDFVERVREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSL 261 (320)
T ss_pred CCc---hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEeh
Confidence 665 6788888888877 8999999999865 88999999999 999999865432 223334334 45777765433
Q ss_pred CCCC-c----hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 332 GGLK-P----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 332 ~~~~-~----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.... . .+.+.+++++++++.+.+. ..+.|+++++++|++.+.++... |+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 262 FHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred hhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 2221 1 2345678889999877654 55889999999999999887765 888764
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=275.22 Aligned_cols=313 Identities=21% Similarity=0.254 Sum_probs=241.6
Q ss_pred eeEEEeecCCCC---cEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCC-------------CCCCCCcccccc
Q 016363 16 CKAAICRIPGKP---LVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDL-------------PKLPLPVIFGHE 78 (390)
Q Consensus 16 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~-------------~~~~~p~~~G~e 78 (390)
|||+++++++++ ++++++++|+| +++||+|||.++++|++|+....|.... ....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999988875 88899999988 4999999999999999999988774210 012568899999
Q ss_pred eeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccc
Q 016363 79 AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT 158 (390)
Q Consensus 79 ~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a 158 (390)
++|+|+.+|+++++|++||+|++.... +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999875321 0125899
Q ss_pred eeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe
Q 016363 159 EYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV----GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 159 ~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~----g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 233 (390)
+|+.++.+.++++|+++++.+++.+++.+.|||+++.+...+.+ |++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999999877777754 999999997 9999999999999999 88888
Q ss_pred cCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC-
Q 016363 234 DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP- 312 (390)
Q Consensus 234 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~- 312 (390)
+++ ++.+.++++|.+.+++... .++.+.+.+. +++|++||++|+.. ...++++++++ |+++.+|.......
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~ 265 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGDT-EKWALKLLKKG-GTYVTLVSPLLKNTD 265 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChHH-HHHHHHHhccC-CEEEEecCCcccccc
Confidence 854 6788888999988887665 4555554432 38999999999885 89999999999 99999985431111
Q ss_pred -ccc--ch----Hhhhc-cee-EE-ee---ecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc
Q 016363 313 -ISL--NS----IEILK-GRS-VC-GT---YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 379 (390)
Q Consensus 313 -~~~--~~----~~~~~-~~~-i~-g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~ 379 (390)
... .+ ..+.. ... +. .. +.......+.+.+++++++++.+.+ .+.+.|+++++.+|++.+.++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~ 343 (350)
T cd08248 266 KLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHA 343 (350)
T ss_pred cccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCC
Confidence 011 00 01111 100 00 00 0000112467889999999997654 36689999999999999987765
Q ss_pred e-EEEEe
Q 016363 380 L-RCIIW 385 (390)
Q Consensus 380 ~-kvvl~ 385 (390)
. |++++
T Consensus 344 ~~~vv~~ 350 (350)
T cd08248 344 RGKTVIK 350 (350)
T ss_pred ceEEEeC
Confidence 5 87763
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=265.24 Aligned_cols=310 Identities=21% Similarity=0.280 Sum_probs=255.9
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++.+++.+ +++.+.+.|.+.+++++||+.++++|+.|+....+..... ..+|.++|||++|+|+++|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPP-PGASDILGLEVAGVVVAVGPGVTGW 79 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCC-CCCCCcccceeEEEEEeeCCCCCCC
Confidence 689999886543 7777887778899999999999999999998887754332 2568899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... .|+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~ 110 (323)
T cd05276 80 KVGDRVCALLA-------------------------------------------------GGGYAEYVVVPAGQLLPVPE 110 (323)
T ss_pred CCCCEEEEecC-------------------------------------------------CCceeEEEEcCHHHhccCCC
Confidence 99999986421 14799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.++.++.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd05276 111 GLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAI 189 (323)
T ss_pred CCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999999877889999999999998 9999999999999999 899999999999999889988888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (390)
+... .++.+.+.+...+ ++|+++|++|+.. ....+++++++ |+++.+|...... ..++...+ .++.++.++.
T Consensus 190 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (323)
T cd05276 190 NYRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGST 263 (323)
T ss_pred eCCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEee
Confidence 7765 5677888877766 8999999999877 88899999999 9999998654322 23333334 4588888876
Q ss_pred cCCCCc-------hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 331 FGGLKP-------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 331 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
...... .+.+.++++++.++++.+. .++.|+++++++|++.+.++... |+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 264 LRSRSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred ccchhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 554310 1335677888888877543 66899999999999999877655 7763
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=265.34 Aligned_cols=313 Identities=16% Similarity=0.188 Sum_probs=246.6
Q ss_pred eeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++++++. .+++++.|.|+|+++|++||+.++++|+.|+..+.|..... ..+|.++|||++|+|++ ++++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~--~~~~~~ 77 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIV-RTFPLVPGIDLAGTVVE--SSSPRF 77 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcccc-CCCCCccccceEEEEEe--CCCCCC
Confidence 78999998875 38899999999999999999999999999999887764322 14678899999999999 677889
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.... .+.. ..|+|++|+.++.+.++++|+
T Consensus 78 ~~Gd~V~~~~~~------------------------~~~~-------------------~~g~~~~~~~v~~~~~~~lp~ 114 (324)
T cd08288 78 KPGDRVVLTGWG------------------------VGER-------------------HWGGYAQRARVKADWLVPLPE 114 (324)
T ss_pred CCCCEEEECCcc------------------------CCCC-------------------CCCcceeEEEEchHHeeeCCC
Confidence 999999874210 0100 125899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHH--HHhCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAW--KVAGVE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~--~~~~~~-~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
++++++++.+++.+++|+.++. +..+.. ++++|||+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++
T Consensus 115 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~ 193 (324)
T cd08288 115 GLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGAS 193 (324)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCC
Confidence 9999999999999999987653 234455 6789999998 9999999999999999 899999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEe
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 328 (390)
+++++++ +...+++++.+++|.++|++++.. ....+..++.+ |+++.+|.... ...+++...+ .++.++.+
T Consensus 194 ~~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08288 194 EIIDRAE-----LSEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLG 265 (324)
T ss_pred EEEEcch-----hhHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEE
Confidence 9988754 233555565557999999999754 77888889988 99999986532 2223334444 45888888
Q ss_pred eecCCCC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 329 TYFGGLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 329 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
....... ..+.+..+.+++.++.+.+ +.+.++++++++|++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 266 IDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred EEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 7533322 2345667778888886653 25899999999999999888776 888763
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=264.11 Aligned_cols=312 Identities=21% Similarity=0.270 Sum_probs=254.3
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++.+++.+ +.+++.+.|++.+++|+|++.++++|++|+....+..... ...|.++|||++|+|+.+|+++..|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAAR-PPLPAILGCDVAGVVEAVGEGVTRF 79 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Confidence 689999988765 7788888888899999999999999999999887764322 1457889999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... |+.. ..|+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~--------------------------~~~~------------------~~g~~~~~~~v~~~~~~~~p~ 115 (326)
T cd08272 80 RVGDEVYGCAG--------------------------GLGG------------------LQGSLAEYAVVDARLLALKPA 115 (326)
T ss_pred CCCCEEEEccC--------------------------CcCC------------------CCCceeEEEEecHHHcccCCC
Confidence 99999987531 1100 015899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++.+.+||+++.+..++++|++++|+|+ |.+|++++++++.+|+ +|++++++ ++.+.++++|.+.++
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~ 193 (326)
T cd08272 116 NLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPII 193 (326)
T ss_pred CCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEE
Confidence 99999999999999999998888899999999999997 9999999999999999 89999988 889999889998888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (390)
+... . +.+.+.+++.+ ++|.++|++++.. ....+++++++ |+++.+|... ..++... ..++..+.+...
T Consensus 194 ~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~ 263 (326)
T cd08272 194 YYRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVFT 263 (326)
T ss_pred ecch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEEc
Confidence 7765 4 77888888877 8999999999865 88899999999 9999998553 1222222 244777666653
Q ss_pred CC--C---C---chhhHHHHHHHHHcCCCCCcccee-eeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 332 GG--L---K---PRSDIATLAQKYLDKELNLGEFIT-HEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 332 ~~--~---~---~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.. . . ..+.+..+++++.++.+.+. ++ +.|++++++++++.+.++... |+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 264 LLPLLTGEGRAHHGEILREAARLVERGQLRPL--LDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccccchhhHHHHHHHHHHHHHCCCcccc--cccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 32 1 0 13567788889989876543 34 889999999999998876655 888764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=262.34 Aligned_cols=310 Identities=24% Similarity=0.280 Sum_probs=249.9
Q ss_pred eeEEEeecCC--CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPG--KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++.+++ ..+.+.+.+.|++.+++++|||.++++|+.|+....+..... ..|.++|||++|+|+.+|++++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~~~~~ 78 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW--SYPHVPGVDGAGVVVAVGAKVTGW 78 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCcccccceEEEEEEeCCCCCcC
Confidence 7999999998 359999999999999999999999999999998887764333 347789999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... +.. .|+|++|+.++.+.++++|+
T Consensus 79 ~~Gd~V~~~~~---------------------------~~~-------------------~~~~~s~~~~~~~~~~~ip~ 112 (325)
T cd08271 79 KVGDRVAYHAS---------------------------LAR-------------------GGSFAEYTVVDARAVLPLPD 112 (325)
T ss_pred CCCCEEEeccC---------------------------CCC-------------------CccceeEEEeCHHHeEECCC
Confidence 99999987531 001 14799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++.+.+||+++.+..++++|++|+|+|+ |.+|++++++++..|+ +|+++. ++++.+.+.++|++.++
T Consensus 113 ~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~ 190 (325)
T cd08271 113 SLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVI 190 (325)
T ss_pred CCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEe
Confidence 99999999999999999999888889999999999998 8999999999999999 888877 77888888889998888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcc-----eeE
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG-----RSV 326 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~-----~~i 326 (390)
+... .++...+.++..+ ++|++++++++.. ....+++++++ |+++.+|...... . ...+..+ +.+
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~~--~--~~~~~~~~~~~~~~~ 261 (325)
T cd08271 191 DYND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDAS--P--DPPFTRALSVHEVAL 261 (325)
T ss_pred cCCC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCCc--c--hhHHhhcceEEEEEe
Confidence 7665 5677888888776 8999999999876 66789999999 9999987443221 1 1112222 233
Q ss_pred EeeecCCC-----CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 327 CGTYFGGL-----KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 327 ~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+...... ...+.+.+++++++++++++. ..+.|+++++.+|++.+.++... |+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 262 GAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 33221111 112446778899999977643 44889999999999999877665 888763
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=263.90 Aligned_cols=306 Identities=23% Similarity=0.300 Sum_probs=242.4
Q ss_pred eEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||+++...+.+ +++.+.+.|.|.+++++|++.++++|+.|+.++.|..+.. ..+|.++|+|++|+|+.+|++++.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ-PPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceEEEEEEeCCCCccCC
Confidence 68888887654 8888889999999999999999999999999888765432 14688999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++... .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (331)
T cd08273 81 VGDRVAALTR-------------------------------------------------VGGNAEYINLDAKYLVPVPEG 111 (331)
T ss_pred CCCEEEEeCC-------------------------------------------------CcceeeEEEechHHeEECCCC
Confidence 9999987531 147999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+++.+++.+++++.+||+++.+..++.+|++|+|+|+ |.+|++++++|+.+|+ +|++++. +++.+.++++|+.. ++
T Consensus 112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~ 188 (331)
T cd08273 112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-ID 188 (331)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-Ec
Confidence 9999999999999999999877789999999999998 9999999999999999 8999997 88888988899754 34
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCc--ccchH-----------hh
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI--SLNSI-----------EI 320 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~--~~~~~-----------~~ 320 (390)
... .++... +...+++|++++++++.. ...++++++++ |+++.+|........ .+++. ..
T Consensus 189 ~~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (331)
T cd08273 189 YRT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLL 261 (331)
T ss_pred CCC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcce
Confidence 333 344333 333448999999999887 88999999999 999999865433221 11111 01
Q ss_pred hc--ceeEEeeecCCC----CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 321 LK--GRSVCGTYFGGL----KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 321 ~~--~~~i~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
.. +.++.+...... ...+.+.+++++++++.+++ .+.++|+++++++|++.+.++... |+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 262 PTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred eccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 11 233333222110 01356788999999997764 366889999999999998877665 7765
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=257.45 Aligned_cols=269 Identities=29% Similarity=0.473 Sum_probs=223.2
Q ss_pred eEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCC
Q 016363 42 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC 121 (390)
Q Consensus 42 evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c 121 (390)
||+|+|.++++|+.|+..+.|..+.. ..+|.++|+|++|+|+++|+.++.|++||+|++.+..+|++|.+|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPP-PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcC-CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hC
Confidence 68999999999999999998876411 15688999999999999999999999999999999999999999997 67
Q ss_pred cCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCC
Q 016363 122 SKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 201 (390)
Q Consensus 122 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~ 201 (390)
..... .+.... |+|++|+.++.+.++++|+++++.+++.+++++.|||+++.....++
T Consensus 76 ~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~ 133 (271)
T cd05188 76 PGGGI---LGEGLD-------------------GGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLK 133 (271)
T ss_pred CCCCE---eccccC-------------------CcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCC
Confidence 55443 222222 58999999999999999999999999999999999999987777779
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~ 280 (390)
++++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|.+.+++..+ .++.+.+. ...+ ++|++|++
T Consensus 134 ~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~ 208 (271)
T cd05188 134 PGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDA 208 (271)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEEC
Confidence 99999999995599999999999998 9999999999999999999888887766 56666666 4454 89999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCCchhhHHHHHHH
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQK 346 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 346 (390)
++.......++++++++ |+++.+|..............+.+++++.++..+. ..++++++++
T Consensus 209 ~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 270 (271)
T cd05188 209 VGGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDL 270 (271)
T ss_pred CCCHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence 99844488999999999 99999996654333333334455689999987654 4567777665
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=264.80 Aligned_cols=317 Identities=20% Similarity=0.231 Sum_probs=238.2
Q ss_pred eeEEEeecCCCCcEEEEeecCCC---CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC-
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP---KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE- 91 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~- 91 (390)
.|++++.+++++++++..+.|.| ++++|+||+.++++|++|+..+.+..... ...|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHF-KVKEKGLGRDYSGVIVKVGSNVAS 79 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhccccccc-ccCCCccCceeEEEEEEeCccccc
Confidence 36899999988888887777766 89999999999999999998875432211 12477899999999999999998
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC----c
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT----H 167 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~ 167 (390)
.|++||+|++.....| + ..|+|++|++++.. .
T Consensus 80 ~~~~Gd~V~~~~~~~~-----------------------~---------------------~~g~~~~~~~v~~~~~~~~ 115 (352)
T cd08247 80 EWKVGDEVCGIYPHPY-----------------------G---------------------GQGTLSQYLLVDPKKDKKS 115 (352)
T ss_pred CCCCCCEEEEeecCCC-----------------------C---------------------CCceeeEEEEEccccccce
Confidence 8999999987642110 0 01589999999987 7
Q ss_pred eEEcCCCCCcchhhccccchhhHHHHHHHHh-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHH
Q 016363 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK 244 (390)
Q Consensus 168 v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~-~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~ 244 (390)
++++|+++++.+++.+++.+.|||+++.... ++++|++|+|+|+ |.+|++++++|+.+|. ++|+++. ++++.+.++
T Consensus 116 ~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~ 194 (352)
T cd08247 116 ITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK 194 (352)
T ss_pred eEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH
Confidence 9999999999999999999999999986666 7999999999998 8999999999998854 3567765 556666788
Q ss_pred hcCCcEEEcCCCCCCcC---HHHHHHhh-cCC-CccEEEEcccChHHHHHHHHHhc---cCCceEEEEcccCCCC--Ccc
Q 016363 245 KFGITDFINPATCGDKT---VSQVIKEM-TDG-GADYCFECIGLTSVMNDAFNSSR---EGWGKTVILGVEMHGS--PIS 314 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~---~~~~i~~~-~~~-g~D~vid~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~--~~~ 314 (390)
++|++++++.++ .+ +...+.+. +++ ++|++|||+|+......++++++ ++ |+++.++...... ..+
T Consensus 195 ~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~ 270 (352)
T cd08247 195 KLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDT 270 (352)
T ss_pred HhCCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchh
Confidence 899999988765 34 44444444 424 99999999998655888999999 99 9999875222110 000
Q ss_pred --------cchHhhhcce-----eEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-
Q 016363 315 --------LNSIEILKGR-----SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL- 380 (390)
Q Consensus 315 --------~~~~~~~~~~-----~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~- 380 (390)
+....+..+. .+...... ...+.+.++++++.++.+++ .+++.++++++++|++.+.++...
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~g 346 (352)
T cd08247 271 FNSWDNPSANARKLFGSLGLWSYNYQFFLLD--PNADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKG 346 (352)
T ss_pred hhhccccchhhhhhhhhhcCCCcceEEEEec--CCHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCC
Confidence 1111111122 22211111 11356788999999997654 366899999999999999887765
Q ss_pred EEEEec
Q 016363 381 RCIIWM 386 (390)
Q Consensus 381 kvvl~~ 386 (390)
|+++++
T Consensus 347 kvvi~~ 352 (352)
T cd08247 347 KVVIKV 352 (352)
T ss_pred cEEEeC
Confidence 988753
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=262.37 Aligned_cols=295 Identities=22% Similarity=0.247 Sum_probs=236.6
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccC
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 106 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~ 106 (390)
+++.+.+.|++.+++|+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|+. +|++||+|++.
T Consensus 20 ~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~---- 93 (329)
T cd05288 20 FELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF---- 93 (329)
T ss_pred eeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc----
Confidence 899999999999999999999999999876555443211 10123567899999999999964 79999999753
Q ss_pred CCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC-CceEEcCCCCC--cchhhc-
Q 016363 107 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIP--LGIACL- 182 (390)
Q Consensus 107 ~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~v~~~p~~~~--~~~aa~- 182 (390)
++|++|+.++. +.++++|++++ +.+++.
T Consensus 94 ------------------------------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~ 125 (329)
T cd05288 94 ------------------------------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGV 125 (329)
T ss_pred ------------------------------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHh
Confidence 26999999999 99999999995 555555
Q ss_pred cccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCc
Q 016363 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDK 260 (390)
Q Consensus 183 ~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~ 260 (390)
+++++.|||+++.+...+.++++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.+++ +|+++++++++ .
T Consensus 126 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~ 201 (329)
T cd05288 126 LGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT---P 201 (329)
T ss_pred cccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC---h
Confidence 88899999999877788999999999996 9999999999999999 89999999999999988 99999988776 5
Q ss_pred CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcc----c-chHhhhcceeEEeeecCCCC
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS----L-NSIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~----~-~~~~~~~~~~i~g~~~~~~~ 335 (390)
++.+.+.+++++++|++|||+|+.. +..++++++++ |+++.+|......... + ....+.++.++.+..+....
T Consensus 202 ~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (329)
T cd05288 202 DLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA 279 (329)
T ss_pred hHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH
Confidence 7888888777558999999999865 89999999999 9999998654322111 1 22234458888877654332
Q ss_pred c--hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 336 P--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 336 ~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
. .+.+.++++++.++.+++.. ...++++++.++++.+.++... |+++
T Consensus 280 ~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 280 DRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 1 24577889999999887653 3568999999999998877655 7763
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=257.77 Aligned_cols=312 Identities=22% Similarity=0.259 Sum_probs=255.9
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+.+.+++.+ +.+.+.+.|.+.+++++|+|.++++|+.|+....+..... ..+|.++|||++|+|+.+|+.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP-PGASDILGLEVAGEVVAVGEGVSRW 79 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCCCCccceeEEEEEEeCCCCCCC
Confidence 678888876654 6677777777899999999999999999998887754332 1457899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... .|+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~ 110 (325)
T TIGR02824 80 KVGDRVCALVA-------------------------------------------------GGGYAEYVAVPAGQVLPVPE 110 (325)
T ss_pred CCCCEEEEccC-------------------------------------------------CCcceeEEEecHHHcEeCCC
Confidence 99999986421 14799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++++++||+++.+...++++++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|.+.++
T Consensus 111 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (325)
T TIGR02824 111 GLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAI 189 (325)
T ss_pred CCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998878899999999999997 9999999999999999 899999999999988889988887
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (390)
+... .++.+.+.++..+ ++|++++++|+.. ....+++++++ |+++.+|....... .++...+ .++.++.+..
T Consensus 190 ~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (325)
T TIGR02824 190 NYRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGST 263 (325)
T ss_pred ecCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEe
Confidence 7655 5677888887776 8999999999865 88899999999 99999986442222 4444444 5688998887
Q ss_pred cCCC-Cc------hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGL-KP------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~-~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.... .. ...+.+++++++++.+++. .++.|++++++++++.+.++... |+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 264 LRARPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hhhcchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 5542 11 1234667888888876543 56889999999999998877665 888753
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=256.69 Aligned_cols=317 Identities=26% Similarity=0.336 Sum_probs=254.9
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++.+.+.+ +.+.+.+.|.+.+++++|+|.++++|+.|+....+..... ..+|.++|||++|+|+.+|+++..|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVTGF 79 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCCcC
Confidence 678888876542 7777888888899999999999999999998887754332 1457889999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+.. ++.. .|++++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~~-------------------------~~~~-------------------~g~~~~~~~~~~~~~~~~p~ 115 (328)
T cd08268 80 AVGDRVSVIPAA-------------------------DLGQ-------------------YGTYAEYALVPAAAVVKLPD 115 (328)
T ss_pred CCCCEEEecccc-------------------------ccCC-------------------CccceEEEEechHhcEeCCC
Confidence 999999876421 1111 14799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++++.+||+++.....+.++++|+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|.+.++
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 194 (328)
T cd08268 116 GLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVI 194 (328)
T ss_pred CCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999999878889999999999998 9999999999999999 899999999999999889988888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH-hhhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~ 330 (390)
+.+. ..+.+.+.+.+.+ ++|++++++++.. ...++++++++ |+++.+|.... ....++.. .+.++..+.+..
T Consensus 195 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (328)
T cd08268 195 VTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYS 268 (328)
T ss_pred ecCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEe
Confidence 7765 6777778877776 8999999999865 88899999999 99999986543 22233333 355588877775
Q ss_pred cCCCC-c----hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLK-P----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~-~----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
..... . ...+..+.+++.++.+.+. ....|+++++.++++.+..+... |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 269 LDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred cccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 44321 1 1234555666777766643 55889999999999998877665 888753
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-32 Score=253.86 Aligned_cols=293 Identities=24% Similarity=0.317 Sum_probs=237.7
Q ss_pred cCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCcccc
Q 016363 35 VEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCK 114 (390)
Q Consensus 35 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~ 114 (390)
+|++.+++++||+.++++|+.|+....+..+.. ..+|.++|+|++|+|+++|+++++|++||+|++....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTM-PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE--------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCC-CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC---------
Confidence 578899999999999999999999988765432 2578899999999999999999999999999875310
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHH
Q 016363 115 SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194 (390)
Q Consensus 115 ~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l 194 (390)
. .|+|++|+.++.+.++++|+++++.+++.+++.+++||+++
T Consensus 72 -------------------~-------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 113 (303)
T cd08251 72 -------------------S-------------------MGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF 113 (303)
T ss_pred -------------------C-------------------CcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH
Confidence 0 14899999999999999999999999999999999999987
Q ss_pred HHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-
Q 016363 195 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~- 272 (390)
+...+++|++|+|+|+ |.+|++++|+++.+|+ +|+++++++++.+.++++|++.+++... .++.+.+.+++++
T Consensus 114 -~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~ 188 (303)
T cd08251 114 -ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGR 188 (303)
T ss_pred -HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCC
Confidence 6789999999999977 9999999999999999 8999999999999999999999988766 6788888888887
Q ss_pred CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCC---C---chhhHHHHHHH
Q 016363 273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL---K---PRSDIATLAQK 346 (390)
Q Consensus 273 g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~---~~~~~~~~~~~ 346 (390)
++|+++|++++.. ....+++++++ |+++.+|.........+....+..+..+....+... . ..+.+.+++++
T Consensus 189 ~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
T cd08251 189 GVDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSL 266 (303)
T ss_pred CceEEEECCcHHH-HHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHH
Confidence 9999999998654 88899999999 999999865422222333333444443333222111 0 12456778889
Q ss_pred HHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 347 YLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 347 ~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
+.++.+++. ..+.|+++++.++++.+.++... |+++
T Consensus 267 ~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 267 VEEGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHCCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 999976643 55889999999999999877665 7763
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-32 Score=253.46 Aligned_cols=302 Identities=21% Similarity=0.282 Sum_probs=242.0
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
||+++++.++.. +.+.+.+.|++++++|+|++.++++|+.|+..+.|... .....+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678888887653 56677777888999999999999999999998877542 111146889999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|++.... .. .|+|++|+.++.+.++++|
T Consensus 81 ~~~G~~V~~~~~~---------------------------~~-------------------~g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF---------------------------TR-------------------GGAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC---------------------------CC-------------------CCcceeEEEecHHHhccCC
Confidence 9999999875420 00 1479999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++..++.+++.+.+||+++.+...+.+|++|+|+|+ |.+|++++++++..|+ +|++++.++ +.+.++++|.+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999999999998877777999999999998 9999999999999999 899888777 8888888998888
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (390)
++... .++.+ .+.+ ++|++++++++.. ...++++++++ |+++.+|...... . ..+..+..+....
T Consensus 193 ~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~--~---~~~~~~~~~~~~~ 258 (309)
T cd05289 193 IDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPPAE--Q---AAKRRGVRAGFVF 258 (309)
T ss_pred EeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCcch--h---hhhhccceEEEEE
Confidence 87655 34433 3334 8999999999885 88999999999 9999998543211 1 2223355555554
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEE
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 383 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 383 (390)
+... .+.+.+++++++++.+++ ++++.|+++++++|++.+..+... |++
T Consensus 259 ~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 259 VEPD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred eccc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 3322 567889999999997653 367899999999999998877654 665
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=250.87 Aligned_cols=310 Identities=26% Similarity=0.426 Sum_probs=252.2
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCC-CCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|+|+++..++.+ +++.+.+ |.+. +++++|++.++++|+.|+..+.|..... ...|.++|+|++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~ 78 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVK-PPLPFVPGSEVAGVVEAVGEGVTG 78 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCC-CCCCCcccceeEEEEEEeCCCCCC
Confidence 688888865443 7777777 6666 5999999999999999999887755322 145678999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|++... .|++++|+.++.+.++++|
T Consensus 79 ~~~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip 109 (323)
T cd08241 79 FKVGDRVVALTG-------------------------------------------------QGGFAEEVVVPAAAVFPLP 109 (323)
T ss_pred CCCCCEEEEecC-------------------------------------------------CceeEEEEEcCHHHceeCC
Confidence 999999987531 1479999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++.+++.++.++.+||+++.+...++++++|+|+|+ |++|++++++|+..|+ +|+++++++++.+.++++|.+.+
T Consensus 110 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 188 (323)
T cd08241 110 DGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHV 188 (323)
T ss_pred CCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCcee
Confidence 999999998898999999998877889999999999998 9999999999999999 89999999999999999998888
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch-HhhhcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~ 329 (390)
++... .++.+.+.+.+++ ++|.+++++|+.. ...++++++++ |+++.+|....... .+.. ..+.++.++.+.
T Consensus 189 ~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 262 (323)
T cd08241 189 IDYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGV 262 (323)
T ss_pred eecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEE
Confidence 87665 6788888888877 8999999999855 88899999999 99999986432211 1222 224458888887
Q ss_pred ecCCCCc------hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 330 YFGGLKP------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 330 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
....+.. .+.+.++++++.++.+.+ ..++.|+++++.++++.+.++... |++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 263 YWGAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ecccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 6544321 245678889999997653 366889999999999998876655 87753
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=248.78 Aligned_cols=311 Identities=21% Similarity=0.318 Sum_probs=246.2
Q ss_pred eEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|++++...+. .+.+.+.+.|+|.+++++||+.++++|+.|+..+.|..... ..+|.++|||++|+|+.+|+.+.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~ 79 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSA-PKPPFVPGFECAGTVEAVGEGVKDFK 79 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCC-CCCCCCCcceeEEEEEEECCCCcCCC
Confidence 4566665543 37777888888899999999999999999999887754322 14677899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++... .|+|++|+.++.+.++++|++
T Consensus 80 ~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~ 110 (337)
T cd08275 80 VGDRVMGLTR-------------------------------------------------FGGYAEVVNVPADQVFPLPDG 110 (337)
T ss_pred CCCEEEEecC-------------------------------------------------CCeeeeEEEecHHHeEECCCC
Confidence 9999987531 147999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++.+++.+++++++||+++.+..++++|++|+|+|+ |.+|++++++|+.+ +. .++.. ..+++.+.++.+|++.++
T Consensus 111 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~ 188 (337)
T cd08275 111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVI 188 (337)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEe
Confidence 9999999999999999999888899999999999998 99999999999998 33 33322 245678888889998888
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC--c-------------ccch
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP--I-------------SLNS 317 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~-------------~~~~ 317 (390)
+... .++.+.+.+.+++++|+++|++|+.. ...++++++++ |+++.+|....... . .+.+
T Consensus 189 ~~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
T cd08275 189 DYRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDP 263 (337)
T ss_pred eCCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCH
Confidence 8766 67888888877558999999999875 78899999999 99999986542211 1 1111
Q ss_pred Hh-hhcceeEEeeecCCCCc-----hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 318 IE-ILKGRSVCGTYFGGLKP-----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 318 ~~-~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.. +.++.++.++.+..... ...+.++++++.++.+.+. .++.|++++++++++.+.++... |+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 264 MKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 22 34488888876542211 1346778888999976543 56889999999999999877665 988764
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-30 Score=246.11 Aligned_cols=296 Identities=22% Similarity=0.250 Sum_probs=228.5
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCC
Q 016363 29 VIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 107 (390)
Q Consensus 29 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~ 107 (390)
++.+.+.|++++++|+|++.++++|+.|+..+.|..... ....|.++|||++|+|+++|+++++|++||+|++....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 777888899999999999999999999999887754210 01356789999999999999999999999999875421
Q ss_pred CCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccch
Q 016363 108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187 (390)
Q Consensus 108 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 187 (390)
.. .|+|++|+.++.+.++++|+++++.+++.+++++
T Consensus 93 -------------------------~~-------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 -------------------------KG-------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred -------------------------CC-------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 00 1479999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHH
Q 016363 188 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 188 ~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
.+||+++.....+++|++|+|+|+ |++|++++++|+.+|+ +|++++++ ++.+.++++|.+++++... .++.
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~--- 200 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV--- 200 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence 999999877777999999999998 9999999999999999 89998865 8888889999988887655 3443
Q ss_pred HhhcCC-CccEEEEcccChH-HHHHHHHHhccCCceEEEEcccCCCCCccc---chHhhhcceeEEeeecCCCCchhhHH
Q 016363 267 KEMTDG-GADYCFECIGLTS-VMNDAFNSSREGWGKTVILGVEMHGSPISL---NSIEILKGRSVCGTYFGGLKPRSDIA 341 (390)
Q Consensus 267 ~~~~~~-g~D~vid~~g~~~-~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~ 341 (390)
...+.+ ++|++++|+++.. .....+..++++ |+++.+|.......... ..........+....... ..+.+.
T Consensus 201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 277 (319)
T cd08267 201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLE 277 (319)
T ss_pred hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHH
Confidence 334455 8999999999532 233344448988 99999986543222211 111112122222222221 257789
Q ss_pred HHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEE
Q 016363 342 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 383 (390)
Q Consensus 342 ~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 383 (390)
+++++++++++++ ++++.|+++++++|++.+.++... |++
T Consensus 278 ~~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vv 318 (319)
T cd08267 278 QLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVV 318 (319)
T ss_pred HHHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence 9999999997654 367899999999999999876654 665
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=242.51 Aligned_cols=282 Identities=21% Similarity=0.216 Sum_probs=231.5
Q ss_pred CeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCC
Q 016363 41 WEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120 (390)
Q Consensus 41 ~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~ 120 (390)
+|++||+.++++|++|++...|..+ .+|.++|||++|+|+++|+.++.|++||+|++...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~---------------- 60 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP---------------- 60 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC----CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec----------------
Confidence 5899999999999999999887642 46789999999999999999999999999987531
Q ss_pred CcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCC
Q 016363 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 200 (390)
Q Consensus 121 c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~ 200 (390)
|+|++|+.++.+.++++|+++++.+++.+++++.+||.++.+...+
T Consensus 61 ----------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 106 (293)
T cd05195 61 ----------------------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL 106 (293)
T ss_pred ----------------------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc
Confidence 4899999999999999999999999999999999999998788899
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC--CcEEEcCCCCCCcCHHHHHHhhcCC-CccE
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIKEMTDG-GADY 276 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~ 276 (390)
++|++|+|+|+ |.+|++++++++.+|+ +|+++++++++.+.+++++ ++.+++... .++.+.+.+++.+ ++|+
T Consensus 107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~ 182 (293)
T cd05195 107 QKGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDV 182 (293)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceE
Confidence 99999999986 9999999999999999 8999999999999998887 677887665 5788888888877 8999
Q ss_pred EEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCC------chhhHHHHHHHHHcC
Q 016363 277 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK------PRSDIATLAQKYLDK 350 (390)
Q Consensus 277 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~~ 350 (390)
++|++|+.. ...++++++++ |+++.+|.........+....+.++..+....+.... ..+.+.+++++++++
T Consensus 183 vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (293)
T cd05195 183 VLNSLSGEL-LRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAG 260 (293)
T ss_pred EEeCCCchH-HHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCC
Confidence 999999884 89999999999 9999998654322122323333345555554322211 124577888999999
Q ss_pred CCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 351 ELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 351 ~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
++. ...+..++++++.+|++.+.++... |+++
T Consensus 261 ~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 261 VLK--PLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred Ccc--cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 765 3456789999999999999877665 7663
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=238.80 Aligned_cols=276 Identities=21% Similarity=0.264 Sum_probs=226.2
Q ss_pred EEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCC
Q 016363 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 124 (390)
Q Consensus 45 V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~ 124 (390)
||+.++++|+.|++.+.|..+ .|.++|+|++|+|+++|+.++.|++||+|++...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------- 56 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-------------------- 56 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC--------------------
Confidence 899999999999999877542 3568999999999999999999999999987521
Q ss_pred CCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCC
Q 016363 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 204 (390)
Q Consensus 125 ~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~ 204 (390)
|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.+...+.+|+
T Consensus 57 ------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~ 106 (288)
T smart00829 57 ------------------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGE 106 (288)
T ss_pred ------------------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCC
Confidence 48999999999999999999999999999999999999887888999999
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC--cEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 280 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~ 280 (390)
+|+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|+ +.++++.+ .++.+.+.+..++ ++|.++|+
T Consensus 107 ~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~ 182 (288)
T smart00829 107 SVLIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNS 182 (288)
T ss_pred EEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeC
Confidence 9999996 9999999999999999 89999999999999999998 77887665 6788888888777 89999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCC-----CchhhHHHHHHHHHcCCCCCc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL-----KPRSDIATLAQKYLDKELNLG 355 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 355 (390)
+++.. ....+++++++ |+++.+|.........++...+.++..+.+..+... ...+.+..++++++++++++.
T Consensus 183 ~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (288)
T smart00829 183 LAGEF-LDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL 260 (288)
T ss_pred CCHHH-HHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc
Confidence 99654 88899999999 999999864322222333333444666655533211 012356778889999977653
Q ss_pred cceeeeeccccHHHHHHHHhcCCce-EEE
Q 016363 356 EFITHEVSFHDINKAFDLLLEGKSL-RCI 383 (390)
Q Consensus 356 ~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 383 (390)
..+.|++++++++++.+..+... |++
T Consensus 261 --~~~~~~~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 261 --PVTVFPISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred --CceEEcHHHHHHHHHHHhcCCCcceEe
Confidence 44789999999999999877654 765
|
Enoylreductase in Polyketide synthases. |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-28 Score=214.09 Aligned_cols=295 Identities=22% Similarity=0.212 Sum_probs=231.2
Q ss_pred EeecC-CCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccc----cceeEEEEEeCCCCCcCCCCCEEeeecccC
Q 016363 32 EIEVE-PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG----HEAVGVVESVGEYVEEVKERDLVLPIFHRD 106 (390)
Q Consensus 32 ~~~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~ 106 (390)
+.+++ ++++++++||.+|.+..|.-...++...+..- --|..+| ..++|+|++.+ .++|++||.|.++.
T Consensus 28 ~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y-~~~~~~G~pi~g~GV~kVi~S~--~~~~~~GD~v~g~~--- 101 (343)
T KOG1196|consen 28 TVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDY-APPYEPGKPIDGFGVAKVIDSG--HPNYKKGDLVWGIV--- 101 (343)
T ss_pred eecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccc-cCcccCCcEecCCceEEEEecC--CCCCCcCceEEEec---
Confidence 33433 57899999999999998876555543333210 1123333 37899999964 47899999998763
Q ss_pred CCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC--CCCCcchhhc
Q 016363 107 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT--PHIPLGIACL 182 (390)
Q Consensus 107 ~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p--~~~~~~~aa~ 182 (390)
+|.||.+++.. ..+++| .++++....+
T Consensus 102 -------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg 132 (343)
T KOG1196|consen 102 -------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLG 132 (343)
T ss_pred -------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhh
Confidence 69999999764 345554 3566666544
Q ss_pred -cccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCC
Q 016363 183 -LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGD 259 (390)
Q Consensus 183 -~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~ 259 (390)
+.++.+|||..+++.+..+.|++|+|-|| |++|+++.|+|+.+|+ +|++.+.+++|.++++. +|.+..+||.+ +
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--e 209 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--E 209 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--c
Confidence 78899999999999999999999999998 9999999999999999 99999999999999976 79999999988 4
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC-----CCcccchHhhhcceeEEeeecCCC
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-----SPISLNSIEILKGRSVCGTYFGGL 334 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~ 334 (390)
.++.+++++..++|+|+.||.+|+.. +...+..|+.. ||++.||+-+.. ..+.--...+.+.+++.|+....+
T Consensus 210 ~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~ 287 (343)
T KOG1196|consen 210 SDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY 287 (343)
T ss_pred cCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeech
Confidence 58999999988889999999999998 99999999999 999999975421 112222233455788888654443
Q ss_pred C--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 335 K--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 335 ~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
. ..+.++.+..++++||++...-+ .-.||+.++||.-|.++.+. |.++.+..
T Consensus 288 ~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 288 LDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred hhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEeec
Confidence 3 24567888999999999877544 33599999999999999987 99988764
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=247.41 Aligned_cols=295 Identities=16% Similarity=0.137 Sum_probs=250.6
Q ss_pred cEEEEeecC---CCCCCeEEEEEeeeecccccccccccCCCCCCC-----CCCcccccceeEEEEEeCCCCCcCCCCCEE
Q 016363 28 LVIEEIEVE---PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL-----PLPVIFGHEAVGVVESVGEYVEEVKERDLV 99 (390)
Q Consensus 28 ~~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~-----~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V 99 (390)
+.|.+-|.. +..++.-+.-|-|+.||..|++...|+.+.... +-.+++|-||+|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 666666644 346788899999999999999999998776621 1237889999998 4559999
Q ss_pred eeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcch
Q 016363 100 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179 (390)
Q Consensus 100 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~ 179 (390)
++.... -++++.+.++.++++.+|.+.++++
T Consensus 1499 M~mvpA-------------------------------------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVPA-------------------------------------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeeeh-------------------------------------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 875431 1799999999999999999999999
Q ss_pred hhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcC
Q 016363 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINP 254 (390)
Q Consensus 180 aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~ 254 (390)
|+++|+.+.|||++|..+.+.++|++|||+++ |++|++|+.+|.+.|+ +|+.++.+++|++++.. +....+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 99999999999999999999999999999955 9999999999999999 99999999999999865 345566777
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
.+ .+|.+.+.+-|+| |+|+|+++...+. ++..++||+.. ||+..+|-..-....++.+..|++|.+++|..+..
T Consensus 1609 Rd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDs 1683 (2376)
T KOG1202|consen 1609 RD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDS 1683 (2376)
T ss_pred cc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhh
Confidence 76 8999999999999 9999999999998 99999999999 99999996554556677888889999999985544
Q ss_pred CC--chhhHHHHHHHHHcCCCC--CccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 334 LK--PRSDIATLAQKYLDKELN--LGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 334 ~~--~~~~~~~~~~~~~~~~~~--~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
.- +.+++.++..++++|.-+ ..++.+++|+-.++++||++|.+++++ |+|+++-
T Consensus 1684 vmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1684 VMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred hhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 32 246778888998887444 567788999999999999999999997 9999864
|
|
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-27 Score=220.93 Aligned_cols=245 Identities=27% Similarity=0.390 Sum_probs=196.4
Q ss_pred CCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceee
Q 016363 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH 149 (390)
Q Consensus 70 ~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 149 (390)
++|.++|+|++|+|+++|+++++|++||+|+..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 588999999999999999999999999999864
Q ss_pred ccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 016363 150 HFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 229 (390)
Q Consensus 150 ~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~ 229 (390)
+.|++|+.++.+.++++|+++++.+++.+ +++.|||+++ ...++++|++|||+|+|++|++++++|+.+|+++
T Consensus 52 -----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 52 -----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred -----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 25899999999999999999999999888 7899999987 5789999999999988999999999999999934
Q ss_pred EEEecCChhhHHHHHhcC-CcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 230 IIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 230 Vi~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
|+++++++++.++++++| ++.+++... ..+.+ ++|++||+++........+++++++ |+++.+|..
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~ 192 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWY 192 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEecc
Confidence 999999999999999998 555544322 11234 8999999999777688999999999 999999865
Q ss_pred CCCCCcccchHhhhc-ceeEEeeecCCCC---------chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcC
Q 016363 308 MHGSPISLNSIEILK-GRSVCGTYFGGLK---------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 377 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~i~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~ 377 (390)
... .... ...+.. ..++.+....... ..+.++++++++.+++++.. +.+.|+++++++|++.+.++
T Consensus 193 ~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~ 268 (277)
T cd08255 193 GLK-PLLL-GEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL--ITHRVPFEDAPEAYRLLFED 268 (277)
T ss_pred CCC-cccc-HHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc--ccCccCHHHHHHHHHHHHcC
Confidence 433 1111 122332 4466665443211 12568899999999976543 56889999999999999877
Q ss_pred --CceEEEE
Q 016363 378 --KSLRCII 384 (390)
Q Consensus 378 --~~~kvvl 384 (390)
...|+++
T Consensus 269 ~~~~~k~~~ 277 (277)
T cd08255 269 PPECLKVVL 277 (277)
T ss_pred CccceeeeC
Confidence 3348764
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=9e-23 Score=162.45 Aligned_cols=108 Identities=34% Similarity=0.596 Sum_probs=93.4
Q ss_pred CCeEEEEEeeeecccccccccccC-CCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCC
Q 016363 40 AWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKS 118 (390)
Q Consensus 40 ~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~ 118 (390)
|+||||||+++|||++|++++.|. .... .+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+.+
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPP--KFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTS--SSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCC--CCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 789999999999999999999994 3333 7999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 119 NTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 119 ~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
+.|.+... +|+..+| +|+||+++++++++++
T Consensus 79 ~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred ccCCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence 99977554 4554554 8999999999999875
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.6e-17 Score=132.75 Aligned_cols=128 Identities=30% Similarity=0.517 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHH
Q 016363 213 AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAF 291 (390)
Q Consensus 213 ~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~ 291 (390)
++|++++|+|+.+|+ +|++++++++|++.++++|+++++++++ .++.+.+++++++ ++|+||||+|....++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999996 9999999999999999999999999988 7799999999998 9999999999878799999
Q ss_pred HHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecCCCCchhhHHHHHHHHHc
Q 016363 292 NSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLD 349 (390)
Q Consensus 292 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~ 349 (390)
++++++ |+++.+|... ....+++...+.. ++++.|+..+. .++++++++++.+
T Consensus 77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 999999 9999999776 4456666666655 99999997666 6789999988864
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.3e-12 Score=124.27 Aligned_cols=177 Identities=15% Similarity=0.193 Sum_probs=137.3
Q ss_pred HHHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHh
Q 016363 190 GVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 190 A~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
.+.++.+..+ ..+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+. ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~---------~~e~v-- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT---------MEEAV-- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc---------HHHHH--
Confidence 3455545544 4789999999999999999999999999 899999999999999999984331 22222
Q ss_pred hcCCCccEEEEcccChHHHHHH-HHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecCCCCchhhHH--HHH
Q 016363 269 MTDGGADYCFECIGLTSVMNDA-FNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA--TLA 344 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~--~~~ 344 (390)
.++|+||+|+|....+... +..++++ |+++.+|.. ..+++...+.. .+++.+++.... ..+++ +.+
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI 325 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRI 325 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchh
Confidence 2689999999998877765 9999998 999999943 23455555555 788888864431 11345 789
Q ss_pred HHHHcCCC-CCccceeee-----eccc-cHHHHHHHHhcCCce--EEEEecCC
Q 016363 345 QKYLDKEL-NLGEFITHE-----VSFH-DINKAFDLLLEGKSL--RCIIWMDK 388 (390)
Q Consensus 345 ~~~~~~~~-~~~~~i~~~-----~~l~-~~~~A~~~~~~~~~~--kvvl~~~~ 388 (390)
+++.+|++ ++...+++. ++|+ ++.+++..+.+.... |+++.+++
T Consensus 326 ~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~ 378 (413)
T cd00401 326 ILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK 378 (413)
T ss_pred hhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence 99999999 888888888 8899 999999999876643 88877654
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.9e-11 Score=117.43 Aligned_cols=155 Identities=17% Similarity=0.172 Sum_probs=113.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCC----------CcCHHHHHHh
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCG----------DKTVSQVIKE 268 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~----------~~~~~~~i~~ 268 (390)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ ..++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4689999999999999999999999999 89999999999999999999854 5543200 0133333333
Q ss_pred h-cC--CCccEEEEcccCh-----HH-HHHHHHHhccCCceEEEEcccCCCC-CcccchHhhh--cceeEEeeecCCCCc
Q 016363 269 M-TD--GGADYCFECIGLT-----SV-MNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEIL--KGRSVCGTYFGGLKP 336 (390)
Q Consensus 269 ~-~~--~g~D~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~--~~~~i~g~~~~~~~~ 336 (390)
. .+ +++|+||+|++.+ .. .+.+++.++++ |+++++|...+.. ..+.+...+. +++++.|.....
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P--- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP--- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc---
Confidence 3 33 2799999999963 24 38999999999 9999999753221 2333333333 588999875322
Q ss_pred hhhHHHHHHHHHcCCCCCcccee
Q 016363 337 RSDIATLAQKYLDKELNLGEFIT 359 (390)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~i~ 359 (390)
.+...++.+++.++.+++..+++
T Consensus 317 ~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred hhHHHHHHHHHHhCCccHHHHhc
Confidence 23334689999999887766664
|
|
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.5e-12 Score=102.54 Aligned_cols=119 Identities=21% Similarity=0.334 Sum_probs=77.5
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc--ChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hc
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG--LTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LK 322 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~ 322 (390)
||+++++|+++ .++ ...+++|+|||++| +...+..++++| ++ |+++.++. ....... ..
T Consensus 1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence 68999999877 555 22349999999999 555346667777 88 99998883 1111111 22
Q ss_pred ceeEEeeecCC-CC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 323 GRSVCGTYFGG-LK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 323 ~~~i~g~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
...+....+.. .. ..+.++++++++++|++++. ++++|||+++.+|++.++++... |+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 33333333332 11 23559999999999987765 88999999999999999998876 9986
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.3e-07 Score=84.20 Aligned_cols=163 Identities=21% Similarity=0.279 Sum_probs=101.1
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
.+.+++|++||.+|+|. |..+.++++..+.. +|++++.+++.++.+++ ++.+.+-... .++.+ + .+.+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~----~d~~~-l-~~~~ 144 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL----GEIEA-L-PVAD 144 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE----cchhh-C-CCCC
Confidence 46789999999999987 88888888887753 79999999999888875 3332221111 12211 1 1223
Q ss_pred CCccEEEEcc------cChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCCchhhHHHHHH
Q 016363 272 GGADYCFECI------GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQ 345 (390)
Q Consensus 272 ~g~D~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 345 (390)
+.+|+|+... .....++.+.+.|+++ |+++..+..... +++ ..+.....+.+...... ....++.+
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~---~~~-~~~~~~~~~~~~~~~~~---~~~~e~~~ 216 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG---ELP-EEIRNDAELYAGCVAGA---LQEEEYLA 216 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC---CCC-HHHHHhHHHHhccccCC---CCHHHHHH
Confidence 3799998543 2234588999999999 999987654322 111 11222222222222221 23445666
Q ss_pred HHHc-CCCCCccceeeeeccccHHHHHHHH
Q 016363 346 KYLD-KELNLGEFITHEVSFHDINKAFDLL 374 (390)
Q Consensus 346 ~~~~-~~~~~~~~i~~~~~l~~~~~A~~~~ 374 (390)
++++ |-..........++++++.++++.+
T Consensus 217 ~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 217 MLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 6666 4333443355678899999999988
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.7e-06 Score=85.76 Aligned_cols=127 Identities=20% Similarity=0.192 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCC----------CcCHHHHHHhh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCG----------DKTVSQVIKEM 269 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~----------~~~~~~~i~~~ 269 (390)
.++++|+|+|+|.+|++++++++.+|+ +|+++++++++++.++.+|++.+. +..+.+ ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 899999999999999999987633 321100 11333333443
Q ss_pred cC---CCccEEEEcc---cChH---HHHHHHHHhccCCceEEEEcccCCCCCcccc-hHh-hh-c-ceeEEeee
Q 016363 270 TD---GGADYCFECI---GLTS---VMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIE-IL-K-GRSVCGTY 330 (390)
Q Consensus 270 ~~---~g~D~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~-~~-~-~~~i~g~~ 330 (390)
.. .++|+||+|+ |.+. ..+..++.++++ +.+++++...+. .+.+. +.. +. . ++++.|..
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence 33 2799999999 5433 457889999999 999999865543 22222 111 22 2 47777764
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.1e-08 Score=96.28 Aligned_cols=160 Identities=18% Similarity=0.203 Sum_probs=107.7
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccc
Q 016363 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 153 (390)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 153 (390)
.-|.|+++.+.+|++++++ +|++.+.+ ||-|.+| ++.|.+... .|...+
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~------------------ 137 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLE------------------ 137 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHH------------------
Confidence 3589999999999998876 77777777 8999998 555655443 222222
Q ss_pred ccccceeEEeeCCceEE---c-CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 016363 154 ISSFTEYSVVDITHVVK---I-TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 229 (390)
Q Consensus 154 ~g~~a~~~~v~~~~v~~---~-p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~ 229 (390)
+.|++++.++. .+.. + +..+|...+ |.....+..+..++++|+|+|+|.+|..+++.++..|+.+
T Consensus 138 -~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~---------Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 138 -RLFQKAFSVGK-RVRTETDISAGAVSISSA---------AVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred -HHHHHHHHHhh-hhhhhcCCCCCCcCHHHH---------HHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 37999988876 3332 3 222222211 1111223445577899999999999999999999999669
Q ss_pred EEEecCChhhHH-HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHH
Q 016363 230 IIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV 286 (390)
Q Consensus 230 Vi~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~ 286 (390)
|+++.++.++.+ +++.+|.. .+.. .++.+.+. ++|+||+|++.+..
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l~-----~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYLA-----EADIVISSTGAPHP 253 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHHh-----hCCEEEECCCCCCc
Confidence 999999988855 55667753 2221 12222222 69999999987653
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.6e-05 Score=77.46 Aligned_cols=103 Identities=18% Similarity=0.229 Sum_probs=79.3
Q ss_pred HHHHHHHHhCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHh
Q 016363 190 GVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 190 A~~~l~~~~~~~-~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
+|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|.+ +. ++.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal-- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA-- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH--
Confidence 455554443554 89999999999999999999999999 999999999887666666654 22 222222
Q ss_pred hcCCCccEEEEcccChHHHH-HHHHHhccCCceEEEEcccC
Q 016363 269 MTDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 308 (390)
.++|+||+++|....+. ..+..++++ +.++..|...
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 26999999999887665 688889988 8888888543
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.8e-05 Score=75.30 Aligned_cols=102 Identities=20% Similarity=0.288 Sum_probs=78.5
Q ss_pred HHHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHh
Q 016363 190 GVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 190 A~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
++.++.+..+ ...|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+. +. ++.+.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~--------~leeal-- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VM--------TMEEAA-- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC--------CHHHHH--
Confidence 3444444434 4789999999999999999999999999 899999998887777666752 22 122222
Q ss_pred hcCCCccEEEEcccChHHHHH-HHHHhccCCceEEEEccc
Q 016363 269 MTDGGADYCFECIGLTSVMND-AFNSSREGWGKTVILGVE 307 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~~~~~-~~~~l~~~~G~~v~~g~~ 307 (390)
.+.|+||+++|+...+.. .+..++++ +.++.+|..
T Consensus 249 ---~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 249 ---KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred ---hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 258999999999887764 88899988 899888854
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=98.14 E-value=4.1e-05 Score=71.69 Aligned_cols=96 Identities=17% Similarity=0.279 Sum_probs=75.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+.+|+|+|.|.+|+.+++.++.+|+ +|++.++++++.+.++.+|.+.+ .. .++.+.+ .++|+||+++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~~~l-----~~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELAEEV-----GKIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHHHHh-----CCCCEEEECC
Confidence 68999999999999999999999999 99999999998888888886532 11 1222222 2699999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccCCC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEMHG 310 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 310 (390)
+........++.++++ +.+++++.....
T Consensus 219 p~~~i~~~~l~~~~~g-~vIIDla~~pgg 246 (296)
T PRK08306 219 PALVLTKEVLSKMPPE-ALIIDLASKPGG 246 (296)
T ss_pred ChhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence 8765456778889988 999999865433
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.7e-05 Score=74.96 Aligned_cols=109 Identities=17% Similarity=0.183 Sum_probs=79.7
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhH-H
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-E 241 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~---~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~-~ 241 (390)
...+++|+.+..+.++... +..+++.++..... -.++.+|+|+|+|.+|..+++.++..|..+|+++++++++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 3567778888888887765 56677776533222 24799999999999999999999988877899999998875 5
Q ss_pred HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHH
Q 016363 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV 286 (390)
Q Consensus 242 ~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~ 286 (390)
+++++|.. +++.+ ++.+.+. .+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~~-----~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLD-----ELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHH-----HHHHHHh-----cCCEEEECCCCCch
Confidence 66778873 33221 2333332 58999999998874
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.01 E-value=6.5e-05 Score=73.51 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=79.7
Q ss_pred HHHHHHHhCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 191 VGAAWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 191 ~~~l~~~~~~-~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.++.+..++ -.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|...+ ++.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv---------~leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL---------TLEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec---------cHHHHHh--
Confidence 4555555554 679999999999999999999999999 89999999888766766666421 2333332
Q ss_pred cCCCccEEEEcccChHHH-HHHHHHhccCCceEEEEccc
Q 016363 270 TDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 307 (390)
.+|+|+++.|+...+ ...++.|+++ +.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 589999999987744 7899999998 999999854
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00021 Score=65.41 Aligned_cols=127 Identities=22% Similarity=0.323 Sum_probs=82.6
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
+|.+|.. +...++.+++++++..+. .+. |.. ++... ..+.++++||-+|+|. |..++.+++ .|+.+|++++
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~t---t~~-~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giD 149 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HPT---TRL-CLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVD 149 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CHH---HHH-HHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEE
Confidence 4666644 677889999988877654 221 111 22222 2257899999999986 877776554 6775799999
Q ss_pred CChhhHHHHHhc----CCcEEEcCCCCCCcCHHHHHHhhcCC--CccEEEEcccChH---HHHHHHHHhccCCceEEEEc
Q 016363 235 INPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMTDG--GADYCFECIGLTS---VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 235 ~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g 305 (390)
.++...+.+++. +....+. ...+ .+|+|+....... .+..+.+.|+++ |.++..|
T Consensus 150 is~~~l~~A~~n~~~~~~~~~~~---------------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsg 213 (250)
T PRK00517 150 IDPQAVEAARENAELNGVELNVY---------------LPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSG 213 (250)
T ss_pred CCHHHHHHHHHHHHHcCCCceEE---------------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 999988877652 2211010 1111 5999987655432 245678889999 9999876
Q ss_pred c
Q 016363 306 V 306 (390)
Q Consensus 306 ~ 306 (390)
.
T Consensus 214 i 214 (250)
T PRK00517 214 I 214 (250)
T ss_pred C
Confidence 4
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00037 Score=64.91 Aligned_cols=94 Identities=15% Similarity=0.225 Sum_probs=70.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|++|+|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ .. .++.+.+ ..+|+|++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~-----~~l~~~l-----~~aDiVint~ 217 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL-----NKLEEKV-----AEIDIVINTI 217 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH-----HHHHHHh-----ccCCEEEECC
Confidence 57899999999999999999999999 99999999988777776664321 11 1222222 2699999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+........++.++++ ..++.++...
T Consensus 218 P~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 218 PALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred ChHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 8655335577788887 8888888543
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00036 Score=67.48 Aligned_cols=99 Identities=20% Similarity=0.196 Sum_probs=69.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++........+ ..++.+.+ ..+|+||++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l-----~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV-----KRADLLIGA 237 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH-----ccCCEEEEc
Confidence 34569999999999999999999999 89999999988877754 55432222221 01222222 269999999
Q ss_pred cc---C--hH-HHHHHHHHhccCCceEEEEcccCC
Q 016363 281 IG---L--TS-VMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 281 ~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
++ . +. .....++.++++ +.++.++...+
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 83 2 11 136777889988 99999986543
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00024 Score=74.54 Aligned_cols=137 Identities=20% Similarity=0.241 Sum_probs=88.2
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
++.+|..+++..++.+ +.++++++..... ......+|+++||+|+ |++|.++++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5778888887777777 5666666642110 0122346899999997 9999999999999999 999999
Q ss_pred CChhhHHHHHh-cCC--c-EE--EcCCCCCCcCHHHHHHhhc--CCCccEEEEcccCh----------------------
Q 016363 235 INPEKFEIGKK-FGI--T-DF--INPATCGDKTVSQVIKEMT--DGGADYCFECIGLT---------------------- 284 (390)
Q Consensus 235 ~~~~~~~~~~~-~g~--~-~v--~~~~~~~~~~~~~~i~~~~--~~g~D~vid~~g~~---------------------- 284 (390)
+++++.+.+.. ++. . .. .|..+ ...+.+.+.+.. .+++|++|+++|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99887665533 432 1 12 23222 122333333332 23799999999831
Q ss_pred ---HHHHHHHHHhcc---CCceEEEEccc
Q 016363 285 ---SVMNDAFNSSRE---GWGKTVILGVE 307 (390)
Q Consensus 285 ---~~~~~~~~~l~~---~~G~~v~~g~~ 307 (390)
...+.+++.++. + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 123445566665 4 889988854
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00051 Score=67.53 Aligned_cols=100 Identities=19% Similarity=0.283 Sum_probs=75.9
Q ss_pred HHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhc
Q 016363 192 GAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 192 ~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
.++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. . ++.+.++
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell~--- 308 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVVE--- 308 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHHh---
Confidence 34434333 4579999999999999999999999999 8999988877765555556432 1 2333332
Q ss_pred CCCccEEEEcccChHHHH-HHHHHhccCCceEEEEccc
Q 016363 271 DGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 271 ~~g~D~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 307 (390)
.+|+|+.++|+...+. ..+..|+++ +.++.+|..
T Consensus 309 --~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 309 --TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred --cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 6899999999877564 799999998 999999854
|
|
| >PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0025 Score=59.38 Aligned_cols=139 Identities=9% Similarity=0.051 Sum_probs=90.1
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhC---CCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGL-GAVGLAVAEGAR-LNRASKI 230 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~---~~~g~~VlI~Ga-g~vG~~ai~la~-~~g~~~V 230 (390)
.|-+|.++..+..+.- +....++..-| -+.|.|. |.+-.. .-..+.|+|.+| +-+++..+.+++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4677777766554411 22223333344 3666664 333322 334467788888 888988888888 5555599
Q ss_pred EEecCChhhHHHHHhcC-CcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 231 IGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 231 i~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
|+++ |+....+.+.+| .+.++.|++ |.++.....-+++|..|+......+...+...=-..+.+|...
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 9999 666677888898 467887765 4444344566788999999877777777776413466777543
|
|
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00011 Score=75.34 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=59.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC---------------------hhhHHHHHhcCCcEEEcCCCC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---------------------PEKFEIGKKFGITDFINPATC 257 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~---------------------~~~~~~~~~~g~~~v~~~~~~ 257 (390)
+.++|++|+|+|+|++|+++++.++..|+ +|++++.. ..+++.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 89988853 345677788998877664320
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChH
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTS 285 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~ 285 (390)
.+... +.+ ..++|+||+++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 01111 111 127999999999764
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00077 Score=58.87 Aligned_cols=109 Identities=18% Similarity=0.220 Sum_probs=78.0
Q ss_pred cccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh----HHHHHhcCCcEE-EcCCCC
Q 016363 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK----FEIGKKFGITDF-INPATC 257 (390)
Q Consensus 183 ~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~----~~~~~~~g~~~v-~~~~~~ 257 (390)
+..+...|. +.+...+++|++||-+|+| .|..++-+|+..+ +|+.+.+.++= .+.++.+|.+.| +...|
T Consensus 55 is~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD- 128 (209)
T COG2518 55 ISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD- 128 (209)
T ss_pred ecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC-
Confidence 333444444 3488999999999999985 5899999999888 79999988773 334566786433 22222
Q ss_pred CCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 258 GDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.. .+... .||.|+-+.+.+..-...++.|+++ |+++.--
T Consensus 129 G~~-------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~Pv 169 (209)
T COG2518 129 GSK-------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPV 169 (209)
T ss_pred ccc-------CCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEE
Confidence 112 23333 8999998888777568899999999 8876554
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00047 Score=61.34 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=60.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCC--c--EEEcCCCCCCcCHHHHHHhhcCC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI--T--DFINPATCGDKTVSQVIKEMTDG--G 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~--~--~v~~~~~~~~~~~~~~i~~~~~~--g 273 (390)
+++.++|+|| +++|.+.++.+...|+ +|+.+.|+.++++.+. +++. - ..+|-.+ ..+..+.+..+... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 4578999999 9999999999999999 9999999999998774 4773 1 2233332 23455566666655 6
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+.++..|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999999885
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00043 Score=56.93 Aligned_cols=97 Identities=21% Similarity=0.217 Sum_probs=63.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc--EEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
--++.+++|+|+|++|.+++..+...|+++|+.+.|+.+|.+.+. .++.. .++.+++ +.+.+. .+|+
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Di 78 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADI 78 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESE
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCe
Confidence 346899999999999999999999999978999999999877664 45322 2344332 322222 6999
Q ss_pred EEEcccChHH--HHHHHHHhccCCceEEEEcc
Q 016363 277 CFECIGLTSV--MNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 277 vid~~g~~~~--~~~~~~~l~~~~G~~v~~g~ 306 (390)
||+|++.+.. ....+......-+.++.++.
T Consensus 79 vI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 79 VINATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp EEE-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred EEEecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 9999987652 12222222221036777764
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0016 Score=58.71 Aligned_cols=104 Identities=22% Similarity=0.261 Sum_probs=67.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc---CCcEEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GITDFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~---g~~~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. .+ +..+.+..+-.+...+.+.+.+... +++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999998 9999999999999999 9999999988776552 22 2223332221111233333333221 368
Q ss_pred cEEEEcccChH-----------------------HHHHHHHHhccCCceEEEEccc
Q 016363 275 DYCFECIGLTS-----------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 275 D~vid~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
|.++.+.+... ..+..++.++++ |+++.++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 99998887421 134455666667 889888854
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00055 Score=67.56 Aligned_cols=160 Identities=18% Similarity=0.153 Sum_probs=96.6
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccc
Q 016363 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 153 (390)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 153 (390)
.-|+|+++.+.+|++++++.-+|+ +.+ ||-|+ ..++.|.+.+. .|...+
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk----~a~~~a~~~g~---~g~~l~------------------ 139 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVK----DAYALAQEAGT---VGTILN------------------ 139 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHH----HHHHHHHHcCC---chHHHH------------------
Confidence 359999999999999988744444 333 33332 22222332221 111111
Q ss_pred ccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 016363 154 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGLGAVGLAVAEGARLNRASKI 230 (390)
Q Consensus 154 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~---~~~g~~VlI~Gag~vG~~ai~la~~~g~~~V 230 (390)
+.|++.+.++ ..+..+.+. ...+.++++.++..... -.++++|+|+|+|.+|.++++.++..|+.+|
T Consensus 140 -~lf~~a~~~~--------k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 140 -RLFQKAFSVA--------KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred -HHHHHHHHHH--------hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 2455544444 222222221 12245556666533222 3678999999999999999999999998789
Q ss_pred EEecCChhhHH-HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH
Q 016363 231 IGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 285 (390)
Q Consensus 231 i~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~ 285 (390)
+++.+++++.+ ++..+|.+ ++... ++.+.+ .++|+||+|++.+.
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~~-----~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPLD-----ELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeHH-----HHHHHh-----ccCCEEEECCCCCC
Confidence 99999988865 56667753 33221 222222 26999999999765
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0027 Score=57.89 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=57.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCcE-EE--cCCCCCCcCHHHHHHh-hc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITD-FI--NPATCGDKTVSQVIKE-MT 270 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~~-v~--~~~~~~~~~~~~~i~~-~~ 270 (390)
..+.++||+|| +++|...+..+...|. +|+.++|+++|++.+.+ + +... ++ |..+ .+-.+.+.+ +.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHHH
Confidence 46789999999 9999999999999999 99999999999876643 2 3322 22 2222 333333332 32
Q ss_pred CC--CccEEEEcccCh
Q 016363 271 DG--GADYCFECIGLT 284 (390)
Q Consensus 271 ~~--g~D~vid~~g~~ 284 (390)
.. .+|+.++++|..
T Consensus 80 ~~~~~IdvLVNNAG~g 95 (265)
T COG0300 80 ERGGPIDVLVNNAGFG 95 (265)
T ss_pred hcCCcccEEEECCCcC
Confidence 22 799999999963
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0018 Score=59.80 Aligned_cols=79 Identities=14% Similarity=0.259 Sum_probs=55.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhc--CCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~--~~g~D~v 277 (390)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ ..++.+.+.+.. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 4678999998 9999999999888999 99999999888776655454332 23322 223333444332 2379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999884
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0018 Score=60.46 Aligned_cols=96 Identities=20% Similarity=0.275 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CCc-EEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT-DFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +.. .+..... + ......+++
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f 226 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA 226 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence 56789999999977 777766665 5666999999999887776542 221 1111111 1 111223489
Q ss_pred cEEEEcccChH---HHHHHHHHhccCCceEEEEcc
Q 016363 275 DYCFECIGLTS---VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 275 D~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~ 306 (390)
|+|+....... .+..+.+.|+++ |.++..|.
T Consensus 227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi 260 (288)
T TIGR00406 227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGI 260 (288)
T ss_pred eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence 99996554332 345677899998 99987764
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0025 Score=58.93 Aligned_cols=77 Identities=19% Similarity=0.305 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccEEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~vid 279 (390)
.++||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ ...+.+.+..... +++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899998 9999999999988999 99999999888777665554433 33332 1233333433322 37999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0045 Score=56.98 Aligned_cols=113 Identities=19% Similarity=0.282 Sum_probs=74.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-E--EcCCCCCCcCHHHHHHhhc--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--INPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~--~ 271 (390)
.|.+|+|+|| +++|.+++.-....|+ +++.+++..++++.+ ++.++.. + +.-+-.+..+..+.+.+.. -
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5789999999 9999998888888999 888888888877766 3334322 2 2111111233344443322 2
Q ss_pred CCccEEEEcccChH-------------------------HHHHHHHHhccCC-ceEEEEcccCCCCCccc
Q 016363 272 GGADYCFECIGLTS-------------------------VMNDAFNSSREGW-GKTVILGVEMHGSPISL 315 (390)
Q Consensus 272 ~g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~ 315 (390)
|++|+.++..|-.. ....++..|++.+ |+|+.++.-.+....++
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 38999999888532 2456777887765 99999986554433333
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.004 Score=53.66 Aligned_cols=94 Identities=19% Similarity=0.231 Sum_probs=64.1
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC-
Q 016363 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL- 283 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~- 283 (390)
|+|+|+ |.+|...++.+...|. +|++++|++++.+. ..+.+.+. .+- .+. +.+.+... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d~---~d~-~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GDL---FDP-DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-eee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence 789999 9999999999999998 99999999998877 33444332 222 122 33333333 79999999984
Q ss_pred ---hHHHHHHHHHhccCC-ceEEEEcccC
Q 016363 284 ---TSVMNDAFNSSREGW-GKTVILGVEM 308 (390)
Q Consensus 284 ---~~~~~~~~~~l~~~~-G~~v~~g~~~ 308 (390)
.......++.++..+ .+++.++...
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccccceeeeccc
Confidence 222555666665541 3677766443
|
... |
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0074 Score=53.05 Aligned_cols=101 Identities=19% Similarity=0.358 Sum_probs=69.2
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHH----hcC-CcEEEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFG-ITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~----~~g-~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
...++.++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++ .++ .+.+..... +..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~----d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG----EAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe----chhhhHhhc
Confidence 456889999999999987 8888899887642 38999999998877654 355 232221111 222223222
Q ss_pred cCCCccEEEEcccC---hHHHHHHHHHhccCCceEEE
Q 016363 270 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 270 ~~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~ 303 (390)
.+.+|.||...+. ...++.+.+.|+++ |+++.
T Consensus 109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~ 143 (198)
T PRK00377 109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVI 143 (198)
T ss_pred -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEE
Confidence 2379999985543 23467788899998 99874
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0062 Score=57.57 Aligned_cols=101 Identities=24% Similarity=0.346 Sum_probs=71.4
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ ..|.+.+..... +..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g----D~~~~~~~- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG----DGYYGVPE- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC----Chhhcccc-
Confidence 356778999999999997 59999999998763 36999999998766554 356553332221 22222211
Q ss_pred cCCCccEEEEcccChHHHHHHHHHhccCCceEEE
Q 016363 270 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~ 303 (390)
.+.+|+|+.+.+........++.|+++ |+++.
T Consensus 147 -~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv 178 (322)
T PRK13943 147 -FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV 178 (322)
T ss_pred -cCCccEEEECCchHHhHHHHHHhcCCC-CEEEE
Confidence 137999999888766566788999998 98765
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0036 Score=54.35 Aligned_cols=81 Identities=22% Similarity=0.235 Sum_probs=59.3
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc-EEEcCCCC-CCcCHHHHHHhhcCCCccE
Q 016363 202 VGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATC-GDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga--g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~-~v~~~~~~-~~~~~~~~i~~~~~~g~D~ 276 (390)
....|||+|+ |++|.+.+.=....|+ .|+++.|+-+..+.+. ++|.. .=+|-.+. .-..+...+++.+.|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4567999985 9999999988889999 9999999999988776 56632 22333220 0113556677777779999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
.++..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9997774
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.004 Score=53.76 Aligned_cols=89 Identities=26% Similarity=0.374 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
-.|.+|.|+|.|.+|...+++++.+|+ +|++.+++..........+... .++.+.+. ..|+|+.+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~---------~~l~ell~-----~aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY---------VSLDELLA-----QADIVSLH 98 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE---------SSHHHHHH-----H-SEEEE-
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee---------eehhhhcc-----hhhhhhhh
Confidence 368999999999999999999999999 9999999988776455544311 24555554 37999887
Q ss_pred ccChH-----HHHHHHHHhccCCceEEEEc
Q 016363 281 IGLTS-----VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 281 ~g~~~-----~~~~~~~~l~~~~G~~v~~g 305 (390)
.+... .-...+..|+++ ..+|.++
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~a 127 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVA 127 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESS
T ss_pred hccccccceeeeeeeeeccccc-eEEEecc
Confidence 77322 124678888887 7787776
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0075 Score=58.03 Aligned_cols=96 Identities=17% Similarity=0.099 Sum_probs=68.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC---Cc-EEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---IT-DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g---~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+|||+|+|.+|+.+++.+.+.+-.+|++.+|+.++.+.+.... .+ ..+|-.+ .+.+.+.|+ ++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li~-----~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALIK-----DFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHHh-----cCCEEEE
Confidence 47999999999999999988888449999999999998886653 22 3344333 122333332 4699999
Q ss_pred cccChHHHHHHHHHhccCCceEEEEccc
Q 016363 280 CIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+.+.....+.+-.|++.+ =.++.....
T Consensus 75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 75 AAPPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 999888666666677765 566666543
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0034 Score=54.28 Aligned_cols=78 Identities=19% Similarity=0.230 Sum_probs=57.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC---cEEEcCCCCCCcC-HHHHHHhhcCC--Cc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI---TDFINPATCGDKT-VSQVIKEMTDG--GA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~-~~~~i~~~~~~--g~ 274 (390)
.|-+|||+|+ +++|++.++-...+|- +||...|++++++.++..-+ ..+.|-.+ .+ ..+.+.++.+. ..
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCCch
Confidence 4789999976 9999999999999998 99999999999999876432 23444433 23 23333333333 68
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
++++++.|-
T Consensus 80 NvliNNAGI 88 (245)
T COG3967 80 NVLINNAGI 88 (245)
T ss_pred heeeecccc
Confidence 899998884
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.005 Score=59.85 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=73.5
Q ss_pred hhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHH
Q 016363 187 VSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 187 ~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
-...+..+.+..++++|++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .++.
T Consensus 152 q~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~~--- 223 (383)
T PRK11705 152 QEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDYR--- 223 (383)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cchh---
Confidence 33444455677889999999999985 56777888888898 9999999999998887643211111111 1221
Q ss_pred HhhcCCCccEEEEc-----ccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
++ .+.+|.|+.. +|. ...++.+.+.|+++ |.++...
T Consensus 224 -~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 224 -DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 12 3479998743 343 23467888899999 9988754
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0044 Score=57.39 Aligned_cols=79 Identities=14% Similarity=0.246 Sum_probs=56.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhh---cCCCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEM---TDGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~---~~~g~D~ 276 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+...+.+.+ .|..+ ..++.+.+.+. ..+.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence 4678999998 9999999999888999 99999999988887766554433 23322 12233333332 3347999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 80 li~~Ag~ 86 (277)
T PRK05993 80 LFNNGAY 86 (277)
T ss_pred EEECCCc
Confidence 9998763
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0036 Score=50.88 Aligned_cols=90 Identities=17% Similarity=0.219 Sum_probs=62.2
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
....++.+++++|.| .|...++.+...|. .|++++.+++..+.+++.+.+.+.+.-- ++++ .+ .+++|+|
T Consensus 12 ~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~----y~~a~li 81 (134)
T PRK04148 12 YEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EI----YKNAKLI 81 (134)
T ss_pred cccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HH----HhcCCEE
Confidence 334456889999999 88766666668899 9999999999999998888765553211 1222 11 1279999
Q ss_pred EEcccChHHHHHHHHHhccC
Q 016363 278 FECIGLTSVMNDAFNSSREG 297 (390)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~ 297 (390)
+.+-..+.....+++.-++-
T Consensus 82 ysirpp~el~~~~~~la~~~ 101 (134)
T PRK04148 82 YSIRPPRDLQPFILELAKKI 101 (134)
T ss_pred EEeCCCHHHHHHHHHHHHHc
Confidence 98888877334444444443
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0039 Score=55.75 Aligned_cols=77 Identities=13% Similarity=0.169 Sum_probs=53.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE--cCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI--NPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+++++...++ |-.+ ..++.+.+..+..+++|++|.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence 47899998 9999999988888899 999999998877666655422222 2222 1223333433333489999988
Q ss_pred ccC
Q 016363 281 IGL 283 (390)
Q Consensus 281 ~g~ 283 (390)
.|.
T Consensus 79 ag~ 81 (225)
T PRK08177 79 AGI 81 (225)
T ss_pred Ccc
Confidence 764
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.012 Score=52.82 Aligned_cols=81 Identities=17% Similarity=0.232 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCC---cEEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI---TDFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~---~~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +.+.. -+.+..+-.+..++.+.+.+... +++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999998888899 899999988776544 33321 12221111012233333433322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999998764
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.027 Score=50.57 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH-HhcCCcEE-EcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
++++|||+|+ |++|.+.++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+ ...+.+.+.+ .+++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~--~~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK--SGALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH--hCCCcEE
Confidence 4789999998 9999999999999999 8877754 44544443 44554432 22221 1122233322 1369999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|++.|.
T Consensus 80 i~~ag~ 85 (237)
T PRK12742 80 VVNAGI 85 (237)
T ss_pred EECCCC
Confidence 999875
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0055 Score=55.87 Aligned_cols=82 Identities=13% Similarity=0.158 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC-cEEEcCCCCCCcCHHHHHHhhc--CC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
..+.+|||+|+ |.+|..++..+...|+ +|+++++++++.+.+.. .+. ..++..+-.+..++.+.+.+.. .+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 35789999998 9999999999998999 89999999887655432 121 1222222111223333333322 13
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
|
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.017 Score=49.45 Aligned_cols=103 Identities=17% Similarity=0.302 Sum_probs=68.7
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
...++++|+.++=+|+| .|..++++++..-..+||+++++++..+..+ +||.+.+..-.. +..+.+.++.
T Consensus 28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC-
Confidence 56788999977777874 3566677775554459999999999887764 488764322221 2223333221
Q ss_pred CCccEEEEcccC--hHHHHHHHHHhccCCceEEEEcc
Q 016363 272 GGADYCFECIGL--TSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 272 ~g~D~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
.+|.+|---|. +..++.++..|+++ |++|.-..
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 69999854443 23467899999999 99986653
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.017 Score=58.44 Aligned_cols=107 Identities=12% Similarity=0.116 Sum_probs=68.3
Q ss_pred HHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c--------CC-----cEEEcCCCCCCc
Q 016363 196 KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--------GI-----TDFINPATCGDK 260 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~--------g~-----~~v~~~~~~~~~ 260 (390)
...+.+.|.+|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ + |. -.++..+- .
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDL---t 148 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDL---E 148 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecC---C
Confidence 4566789999999998 9999999999988999 99999999888754422 1 21 11221111 1
Q ss_pred CHHHHHHhhcCCCccEEEEcccChH---------------HHHHHHHHhccC-CceEEEEcccC
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLTS---------------VMNDAFNSSREG-WGKTVILGVEM 308 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~~ 308 (390)
+ .+.+.+.. +++|+||.++|... ....+++.+... .++||.++...
T Consensus 149 D-~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 149 K-PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred C-HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 1 22333332 37999999987531 123334444332 26898887543
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.069 Score=47.83 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=63.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
....++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++ .+....+.. .++.+. +..
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~-----~d~~~~---~~~ 99 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR-----GDWARA---VEF 99 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE-----Cchhhh---ccC
Confidence 445678899999999976 8888888775 55599999999987775543 343322221 133222 122
Q ss_pred CCccEEEEcccC---------------------------hHHHHHHHHHhccCCceEEEE
Q 016363 272 GGADYCFECIGL---------------------------TSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 272 ~g~D~vid~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+.+|+|+...+- ...+..+.+.|+++ |+++.+
T Consensus 100 ~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 100 RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 389999965220 01235577888988 888755
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0057 Score=58.35 Aligned_cols=79 Identities=19% Similarity=0.316 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEE-E--cCCCCCCcCHHHHHHhhc--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF-I--NPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v-~--~~~~~~~~~~~~~i~~~~--~ 271 (390)
.+++|||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+.. + |-.+ ..++.+.+.+.. .
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 5689999998 9999999999999999 899999998887544 33455432 2 2222 122222222221 2
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 479999999884
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.018 Score=52.11 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=61.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
++.++||+|+ |.+|...+..+...|+ +|++++++.. +.+.+ +..+.. ..+ |..+ ..++.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 4678999998 9999999998888999 8999888653 33222 223332 122 2222 2223333333322
Q ss_pred -CCccEEEEcccCh-------------------HHHHHHHHHhccCCceEEEEcc
Q 016363 272 -GGADYCFECIGLT-------------------SVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 272 -~g~D~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+++|+++.+.+.. ..++.+.+.+... |+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2699999887642 1234455555556 78888764
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.015 Score=53.48 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ...+.. .++..+-.+..++.+.+.+... ++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999998888999 899999988765433 222322 2222111112234444444322 37
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|.+.|
T Consensus 87 iD~vi~~ag 95 (264)
T PRK07576 87 IDVLVSGAA 95 (264)
T ss_pred CCEEEECCC
Confidence 999998876
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.022 Score=49.57 Aligned_cols=101 Identities=18% Similarity=0.195 Sum_probs=63.3
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcCC-Cc
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTDG-GA 274 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~-g~ 274 (390)
...+++|++||.+|+|.-+.......+..+..+|++++.++.. ...+...+ .+..+ ....+.+.+..++ ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence 3557899999999997666544444444343489999998864 11233222 12222 3334455554555 89
Q ss_pred cEEEE-cc----cC------------hHHHHHHHHHhccCCceEEEEc
Q 016363 275 DYCFE-CI----GL------------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 275 D~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
|+|+. .. |. ...++.+.+.|+++ |+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99995 32 21 23467788999998 9998754
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.016 Score=53.04 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++.. ..+ |..+ ..++.+.+.+... +.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4679999998 9999999999999999 999999998766544 344432 122 2222 2233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0063 Score=55.63 Aligned_cols=87 Identities=17% Similarity=0.194 Sum_probs=56.6
Q ss_pred HhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc--EEEcCCCCCCcCHHHHHHhhcC-
Q 016363 197 VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT--DFINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 197 ~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~--~v~~~~~~~~~~~~~~i~~~~~- 271 (390)
....-++.++||+|+ |.+|..+++.+...|+ +|+.++++++..+.+.+ .... .++..+-.+...+.+.+.+...
T Consensus 5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 344457889999998 9999999999999999 89999998877665543 2211 2222221112223333333221
Q ss_pred -CCccEEEEcccCh
Q 016363 272 -GGADYCFECIGLT 284 (390)
Q Consensus 272 -~g~D~vid~~g~~ 284 (390)
+++|+||.+.|..
T Consensus 84 ~~~~d~vi~~ag~~ 97 (264)
T PRK12829 84 FGGLDVLVNNAGIA 97 (264)
T ss_pred hCCCCEEEECCCCC
Confidence 3799999988854
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0064 Score=55.45 Aligned_cols=79 Identities=23% Similarity=0.358 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+|++|||+|+ |++|.+.++.+...|+ +|+++++++.+.+.+ .+++...+ .|..+ ...+.+.+.+... +++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 9999999999999999 999999988776544 34443222 23222 1223333333221 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.05 Score=47.97 Aligned_cols=93 Identities=12% Similarity=-0.066 Sum_probs=58.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh-HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.|.+|||+|+|.+|...+..+...|+ +|+++++...+ ...+..-+. ....... +...- -.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~-i~~~~~~-----~~~~~----l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGK-IRWKQKE-----FEPSD----IVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCC-EEEEecC-----CChhh----cCCceEEEEc
Confidence 56799999999999999998888998 88888754322 222222121 1111121 11110 1279999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEccc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++.+. ++..+...+.. +.++.+...
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d~ 102 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVITD 102 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECCC
Confidence 99988 66655555555 666666544
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0098 Score=54.11 Aligned_cols=77 Identities=18% Similarity=0.287 Sum_probs=55.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHH---HHHHhhcCCCccEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVS---QVIKEMTDGGADYCF 278 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~---~~i~~~~~~g~D~vi 278 (390)
+++||+|+ |.+|...++.+...|+ +|+++++++++.+.+++.+.+.+. |..+ ...+. +.+.+...+.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence 57999998 9999999999999999 999999999988887777755432 3222 12222 233333334789999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
.+.|.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 88774
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.021 Score=51.58 Aligned_cols=81 Identities=19% Similarity=0.140 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ..+... ++..+-.+..++.+.+.+... ++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 8999998887655432 233322 221111011222222222221 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999885
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.028 Score=44.74 Aligned_cols=102 Identities=19% Similarity=0.343 Sum_probs=67.5
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHHh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~~ 268 (390)
.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++ ++.. .++..+- ...+..
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~------~~~~~~ 84 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA------PEALED 84 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc------cccChh
Confidence 3556677888999999976 8888888887754499999999988777643 4432 2222111 110111
Q ss_pred hcCCCccEEEEcccCh---HHHHHHHHHhccCCceEEEEc
Q 016363 269 MTDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.+|+|+...+.. ..++.+.+.|+++ |+++...
T Consensus 85 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 85 -SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred -hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 123799999754332 2477889999998 9987653
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.023 Score=51.32 Aligned_cols=81 Identities=20% Similarity=0.257 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMT--DGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g~D~ 276 (390)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++... .+..+-.+..+..+.+.... .+++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999998 9999999999999999 999999987766544 3455432 22111101112222222222 137999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9998874
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.019 Score=54.84 Aligned_cols=79 Identities=20% Similarity=0.171 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEE---EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF---INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.+|||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++.|.+.. .|..+ ..++.+.+.....
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4678999998 9999999999988999 999999998776544 33454332 23222 1223333332222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 379999999884
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.047 Score=46.04 Aligned_cols=89 Identities=18% Similarity=0.115 Sum_probs=57.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|||+|+|.+|..-++.+...|+ +|++++ ++..+.+.+++.-. +.... +.+. .-.++|+|+-++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~~----dl~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSND----DIKDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cChh----cCCCceEEEECC
Confidence 57889999999999999998888999 888774 44444444554211 22222 2111 012799999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEc
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+... .+..+...+.. +..+...
T Consensus 79 ~d~e-~N~~i~~~a~~-~~~vn~~ 100 (157)
T PRK06719 79 NQHA-VNMMVKQAAHD-FQWVNVV 100 (157)
T ss_pred CCHH-HHHHHHHHHHH-CCcEEEC
Confidence 9888 76666655554 3344443
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.015 Score=52.41 Aligned_cols=77 Identities=18% Similarity=0.330 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEE-EcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+...+ .|..+ ...+.+.+.. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~--~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD--DAAIRAALAA--AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC--HHHHHHHHHH--hCCCCEEE
Confidence 5679999998 9999999999999999 89999999887765543 344322 23322 1112222221 13799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0098 Score=54.49 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
++.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.. ..+..+-.+..++.+.+.+... +.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5789999998 9999999999989999 89999999887766644 3322 2221111011223333333322 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9998873
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0099 Score=54.68 Aligned_cols=98 Identities=18% Similarity=0.214 Sum_probs=71.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
..+|.|+|+|.+|.-++.+|.-+|+ +|...+.+.+|++.+..+ +-+.-.-++. ...+.+.+. ++|++|.++
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v~-----~aDlvIgaV 239 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAVK-----KADLVIGAV 239 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHhh-----hccEEEEEE
Confidence 3467888999999999999999999 999999999999999874 4331222222 123333332 689998754
Q ss_pred cCh------HHHHHHHHHhccCCceEEEEcccCC
Q 016363 282 GLT------SVMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 282 g~~------~~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
=-+ ...++.++.|+++ +.++++....+
T Consensus 240 LIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 240 LIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred EecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 321 1357789999999 99999986543
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.011 Score=54.62 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=53.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEEE--cCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFI--NPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v~--~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +.++...++ |..+ ..++.+.+.+... +++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 578999998 9999999998888899 899999998877654 334412222 3322 2233333333322 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999874
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.028 Score=51.20 Aligned_cols=81 Identities=14% Similarity=0.150 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---cCCcE-EEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-FINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+...+ .+... .+..+-.+..++.+.+.+... +++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999998 9999999998888999 88989988877644433 33321 221111011223333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.015 Score=57.12 Aligned_cols=99 Identities=13% Similarity=0.066 Sum_probs=64.2
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+--.+.+|||+|+|.+|.+++..+...|+.+++++.|+.++.+.+. +++...++.++ ++.+.+ ..+|+
T Consensus 176 ~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~-----~l~~~l-----~~aDi 245 (414)
T PRK13940 176 LDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS-----ELPQLI-----KKADI 245 (414)
T ss_pred hcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH-----HHHHHh-----ccCCE
Confidence 34456789999999999999999999999879999999988866554 45422232221 122222 25999
Q ss_pred EEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 277 CFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 277 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
||.|++.++.+-. ...++...=.+++++.+
T Consensus 246 VI~aT~a~~~vi~-~~~~~~~~~~~iDLavP 275 (414)
T PRK13940 246 IIAAVNVLEYIVT-CKYVGDKPRVFIDISIP 275 (414)
T ss_pred EEECcCCCCeeEC-HHHhCCCCeEEEEeCCC
Confidence 9999998773211 12222210245667654
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.023 Score=48.44 Aligned_cols=98 Identities=14% Similarity=0.177 Sum_probs=65.8
Q ss_pred hhccccchhhHHHHHHHHhCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC
Q 016363 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258 (390)
Q Consensus 180 aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 258 (390)
....|+....+...+.+...--.|.+|||+|+|. +|..++..+...|+ +|+++.++.+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~-------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK-------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch--------------------
Confidence 3445655555554443344456899999999986 59999999999999 8888876521
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
++.+.+. .+|+||.+++.+..+. ...++++ -.++.++.+.
T Consensus 80 --~l~~~l~-----~aDiVIsat~~~~ii~--~~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 --NLKEHTK-----QADIVIVAVGKPGLVK--GDMVKPG-AVVIDVGINR 119 (168)
T ss_pred --hHHHHHh-----hCCEEEEcCCCCceec--HHHccCC-eEEEEccCCC
Confidence 2333332 5899999999876332 2356665 6778887543
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.011 Score=55.34 Aligned_cols=79 Identities=19% Similarity=0.293 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCC--cEE---EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--TDF---INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~--~~v---~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.|.++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++. ... .|..+ ..++.+.+.+... +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 999999998877655 33542 111 23222 1223333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999985
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.012 Score=53.99 Aligned_cols=79 Identities=13% Similarity=0.159 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ .+.. .++ |..+ ...+.+.+.+...
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999999888999 99999999877654432 2322 222 2222 1222223333221
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 379999998873
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.013 Score=54.76 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+.+ ..+..+-.+..++.+.+.... -++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888899 99999999877655432 2332 122221101122333333221 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 9999999874
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.081 Score=46.74 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=61.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.|.+|||+|+|.+|...++.+...|+ +|++++.... .+..+.+.|.-..+ ..+ +.... + .++|+||-+
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~-----~~~~d--l--~~~~lVi~a 76 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARC-----FDADI--L--EGAFLVIAA 76 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCC-----CCHHH--h--CCcEEEEEC
Confidence 46799999999999999999999999 8988886653 33333333421222 122 11111 1 279999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEccc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++.+..-..+....+.. |..+.+...
T Consensus 77 t~d~~ln~~i~~~a~~~-~ilvn~~d~ 102 (205)
T TIGR01470 77 TDDEELNRRVAHAARAR-GVPVNVVDD 102 (205)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCC
Confidence 99886344555556566 777766543
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.013 Score=52.46 Aligned_cols=79 Identities=19% Similarity=0.174 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHH----HHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITDF-INPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++... +...+...+ .|..+ ..++.+.+.+... ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 3789999998 9999999998888899 89999998765332 222333222 12221 1233333333222 27
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+||.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998874
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.029 Score=55.87 Aligned_cols=80 Identities=19% Similarity=0.383 Sum_probs=51.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh--hhHHH-HHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEI-GKKFGITDF-INPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~--~~~~~-~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.++.++||+|+ |++|...++.+...|+ +|+++++.+ ++.+. ..+++...+ +|..+ ...+.+.+..... ++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCC
Confidence 35789999998 9999999999999999 899988743 22322 234554322 23332 1222222222221 27
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 285 id~vi~~AG~ 294 (450)
T PRK08261 285 LDIVVHNAGI 294 (450)
T ss_pred CCEEEECCCc
Confidence 9999999883
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.013 Score=53.24 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE--EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
++.++||+|+ |.+|...++.+...|+ +|+.++++++..+...++.... .+..+-.+..++.+.+.+... +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999998 9999999998888999 8999999887655554442211 222221111223333333222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999884
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.013 Score=53.78 Aligned_cols=78 Identities=14% Similarity=0.142 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CCc-EEE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.+++|+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+. +.+ ..+ |..+ ..+..+.+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4789999998 9999999999989999 999999988777666543 322 112 2222 1223333433322 379
Q ss_pred cEEEEccc
Q 016363 275 DYCFECIG 282 (390)
Q Consensus 275 D~vid~~g 282 (390)
|++|.+.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999886
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.03 Score=53.01 Aligned_cols=94 Identities=10% Similarity=0.117 Sum_probs=61.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+|+|+|+ |.+|...++.+...|. +|++++|+.++...+...+.+.+. |..+ . +.+.+... ++|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~-g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK-GVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC-CCCEEEECCC
Confidence 6999998 9999999999888998 999999988776655555654332 2221 1 22322222 6899999876
Q ss_pred ChH------------HHHHHHHHhccCC-ceEEEEcc
Q 016363 283 LTS------------VMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 283 ~~~------------~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
... ....+++.++..+ .+++.++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 321 1234455555541 37877765
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.014 Score=53.13 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE-E--EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-F--INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~-v--~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ .+.+. . .|..+ ..++.+.+.+...
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4789999998 9999999999999999 99999998877655432 23221 1 22222 1233333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.016 Score=54.78 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEE--cCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI--NPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~--~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.+.+|||+|+ |++|.+++..+...|+ +|+++++++++.+.+. ++..-..+ |-.+ ..++.+.+.+... +++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 4679999998 9999999998888999 8999999988765442 23211222 2222 1223333333322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|.+.|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99998873
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.02 Score=52.15 Aligned_cols=74 Identities=14% Similarity=0.120 Sum_probs=51.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EE--EcCCCCCCcCHHHHHHhhcCCCc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
+.++||+|+ |.+|..+++.+...|+ +|+++++++.+.+.+.+ .+.. .+ .|..+ .+.+.+...+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~------~~~~~~~~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD------AIDRAQAAEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC------HHHHHHHhcCCC
Confidence 458999998 9999999999999999 99999998876655432 2322 11 22222 223444434489
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 75 d~vi~~ag~ 83 (257)
T PRK09291 75 DVLLNNAGI 83 (257)
T ss_pred CEEEECCCc
Confidence 999998873
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.015 Score=45.66 Aligned_cols=92 Identities=26% Similarity=0.297 Sum_probs=60.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHHhc----C--CcEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKKF----G--ITDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~~----g--~~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
|+.+||-+|+|. |..++.+++ ..++ +|++++.+++-.+.+++. + ....+... ++ .. .....+++
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~~-~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-EF-DPDFLEPF 71 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-HG-GTTTSSCE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-cc-CcccCCCC
Confidence 688999999864 777777777 4677 999999999988877542 2 22222222 23 11 11112279
Q ss_pred cEEEEcc-cCh---H------HHHHHHHHhccCCceEEE
Q 016363 275 DYCFECI-GLT---S------VMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 275 D~vid~~-g~~---~------~~~~~~~~l~~~~G~~v~ 303 (390)
|+|+... ... . .++.+.+.|+++ |+++.
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 9999766 211 1 267888999998 98875
|
... |
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.015 Score=53.89 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc--EEE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~--~v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.... ..+ |..+ ...+.+.+.+... +++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3578999998 9999999998888899 899999998887766553221 122 2222 1223333333222 269
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++++.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999999885
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.042 Score=46.17 Aligned_cols=99 Identities=21% Similarity=0.341 Sum_probs=63.3
Q ss_pred HHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 191 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.++.+..+ .-.|.+++|.|=|.+|.-.++.++.+|+ +|++++..|-+.-.+..-|.+. . ++.+.+
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~--------~~~~a~--- 76 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-M--------TLEEAL--- 76 (162)
T ss_dssp HHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E---------HHHHT---
T ss_pred HHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-c--------CHHHHH---
Confidence 334444444 4589999999999999999999999999 9999999997765555445432 1 233332
Q ss_pred cCCCccEEEEcccChHHH-HHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g 305 (390)
...|++|.++|....+ .+-+..|+++ -.+..+|
T Consensus 77 --~~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~G 110 (162)
T PF00670_consen 77 --RDADIFVTATGNKDVITGEHFRQMKDG-AILANAG 110 (162)
T ss_dssp --TT-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESS
T ss_pred --hhCCEEEECCCCccccCHHHHHHhcCC-eEEeccC
Confidence 2589999999987633 5778889976 5555555
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.034 Score=51.77 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC----CcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG----ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g----~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
..+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+.+ ++ ...+...+ ++.+.+ ..+|
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~-----~~~~~~-----~~aD 194 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS-----DLAAAL-----AAAD 194 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc-----chHhhh-----CCCC
Confidence 356899999999999999999999999899999999988766533 32 11222211 121111 2699
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+||+|++.
T Consensus 195 iVInaTp~ 202 (284)
T PRK12549 195 GLVHATPT 202 (284)
T ss_pred EEEECCcC
Confidence 99999653
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.016 Score=52.53 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC--Cc-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG--IT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g--~~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. +. .. ..+..+-.+..++...+.+... +++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999998 9999999998888899 89999999887655432 22 21 1221111112233333333211 279
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+||.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999998875
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.017 Score=58.20 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=56.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.+.++++|+|+|.|..|++++++++..|+ +|++.+..+.+.+.++++|...+ .... ..+.+. .+|+|+
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~-----~~~~l~-----~~D~VV 75 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD-----AVQQIA-----DYALVV 75 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc-----hHhHhh-----cCCEEE
Confidence 35678999999999999999999999999 99999987777766777777433 2211 112221 579999
Q ss_pred EcccChH
Q 016363 279 ECIGLTS 285 (390)
Q Consensus 279 d~~g~~~ 285 (390)
.+.|-+.
T Consensus 76 ~SpGi~~ 82 (488)
T PRK03369 76 TSPGFRP 82 (488)
T ss_pred ECCCCCC
Confidence 9888654
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.037 Score=50.29 Aligned_cols=81 Identities=21% Similarity=0.283 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ..+.. +.+..+-.+..++.+.+..... ++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999998888899 9999999988765442 22332 1222111112223333333221 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+++.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 9999998874
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.012 Score=50.36 Aligned_cols=103 Identities=19% Similarity=0.139 Sum_probs=66.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc-CCCCC-------------CcCHHHHHHh
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN-PATCG-------------DKTVSQVIKE 268 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~-~~~~~-------------~~~~~~~i~~ 268 (390)
..+|+|+|+|.+|+.|+.+++.+|+ +|+..+..+++.+.++..+...+.. ..+.. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3789999999999999999999999 9999999999988888877654432 11100 0112222222
Q ss_pred hcCCCccEEEEccc--C---hH-HHHHHHHHhccCCceEEEEcccC
Q 016363 269 MTDGGADYCFECIG--L---TS-VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 269 ~~~~g~D~vid~~g--~---~~-~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
... .+|+||-+.- + +. ..+..++.|+++ ..|+++....
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~ 142 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQ 142 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecC
Confidence 211 5788885322 1 11 135678889887 7888887544
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.022 Score=51.55 Aligned_cols=81 Identities=15% Similarity=0.227 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--HHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.+.++||+|+ |.+|.+.++.+...|+ +|+.+++++.. .+.+++.+.. ..+..+-.+..++.+.+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999998 9999999999988999 99999987521 2333444432 2222111112233333333322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|.+.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998874
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.024 Score=51.74 Aligned_cols=83 Identities=22% Similarity=0.304 Sum_probs=52.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhh-HHH----HHhcCC-c-EEEcCCCCCCcCHHHHHHhhc
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEK-FEI----GKKFGI-T-DFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~-~~~----~~~~g~-~-~v~~~~~~~~~~~~~~i~~~~ 270 (390)
+..+.+|||+|+ |++|.+.++-+... |+ +|+++++++++ .+. ++..+. + +++..+-.+..++.+.+.+..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999998 99999998876666 47 99999998775 432 233332 2 233222211233333344433
Q ss_pred C-CCccEEEEcccC
Q 016363 271 D-GGADYCFECIGL 283 (390)
Q Consensus 271 ~-~g~D~vid~~g~ 283 (390)
. +++|+++.+.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 489999987765
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.016 Score=52.76 Aligned_cols=80 Identities=19% Similarity=0.173 Sum_probs=52.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+.. ..+..+-.+...+.+.+.+... +++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999998 9999999999999999 99999998876654432 2322 2232221112233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999998874
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0078 Score=46.91 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=59.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|||+|+|.+|..-++.+...|+ +|+++++.. +..+ +.-... . ..+.+ + -.++|+|+-++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~~~---~--l~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REFEE---D--LDGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-GG---G--CTTESEEEE-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhHHH---H--HhhheEEEecC
Confidence 57899999999999999999999999 999999775 2222 111111 1 12211 1 12799999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccCC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
+.+..-+.+....+.. |..+.+.....
T Consensus 69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p~ 95 (103)
T PF13241_consen 69 DDPELNEAIYADARAR-GILVNVVDDPE 95 (103)
T ss_dssp S-HHHHHHHHHHHHHT-TSEEEETT-CC
T ss_pred CCHHHHHHHHHHHhhC-CEEEEECCCcC
Confidence 9888445566666667 88888875443
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.023 Score=52.16 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCc-EEEcCCCCCCcCHHHHHHhhc-CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMT-DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~-~v~~~~~~~~~~~~~~i~~~~-~~g 273 (390)
++.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ + +.+ ..+..+-.+..++.+.+.+.. -++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4789999998 9999999999999999 89999999877654432 2 322 122211111223333333332 137
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 86 iD~lv~nag~ 95 (263)
T PRK08339 86 PDIFFFSTGG 95 (263)
T ss_pred CcEEEECCCC
Confidence 9999998874
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.024 Score=50.54 Aligned_cols=77 Identities=16% Similarity=0.219 Sum_probs=52.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
++++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|-.+ ..++.+.+.++.++++|+++.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence 47899998 9999999988878899 8999999988877776665432 223222 12233332233333799999987
Q ss_pred cC
Q 016363 282 GL 283 (390)
Q Consensus 282 g~ 283 (390)
|.
T Consensus 79 g~ 80 (222)
T PRK06953 79 GV 80 (222)
T ss_pred Cc
Confidence 75
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.023 Score=51.40 Aligned_cols=80 Identities=21% Similarity=0.255 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... .+..+-.+...+.+.+..... ++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999999998999 899999988765443 2234332 222111011223333333322 36
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (253)
T PRK08217 83 LNGLINNAG 91 (253)
T ss_pred CCEEEECCC
Confidence 899999887
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.04 Score=55.90 Aligned_cols=103 Identities=21% Similarity=0.267 Sum_probs=68.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEE-E--cCCCCCCcCHHHHHHhhcC--CC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-I--NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v-~--~~~~~~~~~~~~~i~~~~~--~g 273 (390)
..|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++.... + |..+ ..++.+.+.+... +.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 36789999998 9999999999999999 99999999888766644 443321 2 3222 1233333333322 37
Q ss_pred ccEEEEcccChH--------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 274 ADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 274 ~D~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+|++|.+.|... ..+.++..++.. |+++.++..
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 999999887420 133445566556 899988754
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.021 Score=51.91 Aligned_cols=81 Identities=17% Similarity=0.172 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+. +.+.+. .+..+-.+..++.+.+.+... ++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4679999998 9999999998888999 8999999988765442 234332 221111011223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 9999998874
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.03 Score=51.23 Aligned_cols=75 Identities=16% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~vi 278 (390)
.|.++||+|+ +++|.+.+..+...|+ +|+.+++++.+...+.. ...|-.+ ..++.+.+.+... +++|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~----~~~D~~~--~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYNDVDY----FKVDVSN--KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccCceEE----EEccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999998 9999999999999999 99999987654321100 1122222 1233333433322 3699999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98874
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.019 Score=52.54 Aligned_cols=79 Identities=18% Similarity=0.185 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCC-cE-EE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGI-TD-FI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~-~~-v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ .+. .. .+ |-.+ ..++.+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4789999998 9999999999999999 89999999877654422 111 11 12 2222 1223333333322
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++++++|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 379999999884
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.024 Score=52.45 Aligned_cols=100 Identities=17% Similarity=0.274 Sum_probs=60.7
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc--EEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT--DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~~~~~i~ 267 (390)
+.+.+++++|++||-+|+| -|..+..+|+..|+ +|++++.|++..+.++ +.|.. .-+... ++ +
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-----D~----~ 122 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-----DY----R 122 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES------G----G
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-----ec----c
Confidence 4578899999999999987 56667778888899 9999999999887764 34522 112111 22 1
Q ss_pred hhcCCCccEEEE-----cccCh---HHHHHHHHHhccCCceEEEEcc
Q 016363 268 EMTDGGADYCFE-----CIGLT---SVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 268 ~~~~~g~D~vid-----~~g~~---~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
++. +.+|.|+. .+|.. ..++.+.+.|+|+ |+++.-..
T Consensus 123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 121 27999864 44432 2367788999999 99875543
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.024 Score=51.93 Aligned_cols=82 Identities=22% Similarity=0.349 Sum_probs=53.7
Q ss_pred CCCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCcEE--E--cCCCCCCcCHHHHHH
Q 016363 199 GVEVGSTVAIFGL-G-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITDF--I--NPATCGDKTVSQVIK 267 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~~v--~--~~~~~~~~~~~~~i~ 267 (390)
.+..+.++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...+ ++...+ + |..+ ..++.+.+.
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~ 89 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALID 89 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHH
Confidence 3445789999997 6 799999999999999 89999988876654422 343222 2 2222 122333333
Q ss_pred hhc--CCCccEEEEcccC
Q 016363 268 EMT--DGGADYCFECIGL 283 (390)
Q Consensus 268 ~~~--~~g~D~vid~~g~ 283 (390)
+.. .+++|++|.+.|.
T Consensus 90 ~~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 221 1379999999984
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.044 Score=48.45 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=65.9
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHH
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI 266 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i 266 (390)
.+..+++++++||-+|+| .|..++.+++..+ ..+|++++.+++-.+.+++ .+.. .++..+ ..+.+
T Consensus 65 ~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d------~~~~~ 137 (205)
T PRK13944 65 CELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD------GKRGL 137 (205)
T ss_pred HHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC------cccCC
Confidence 366778899999999885 3667777777664 2289999999887665543 4432 223221 11111
Q ss_pred HhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
. ..+.+|+|+-+.......+.+++.|+++ |+++..
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1 1237999997666555467888999999 998753
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.023 Score=52.51 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ + ++|.+.++.+...|+ +|+.++++++..+.+ +++|....+..+-.+..++.+.+.+... +
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 5789999998 4 899999999999999 899888775332222 2345333322211112223333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|+++++.|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 79999998873
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.081 Score=47.00 Aligned_cols=100 Identities=20% Similarity=0.256 Sum_probs=66.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i 266 (390)
+....+++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.+++ .|.. .++..+. ..
T Consensus 68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~------~~-- 138 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG------TL-- 138 (212)
T ss_pred HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc------cc--
Confidence 3467789999999999885 36666777777653 289999999987766644 4433 2222211 00
Q ss_pred HhhcC-CCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 267 KEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 267 ~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
.+.. +.||+|+-...........++.|+++ |+++..
T Consensus 139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 0112 37999986555555467888999999 998764
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.049 Score=50.15 Aligned_cols=76 Identities=16% Similarity=0.228 Sum_probs=49.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE----EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD----FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~----v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ ..++.+.+.+... ++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899998 9999999998888999 899999887765443 2234321 123322 1222222222221 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999974
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.045 Score=48.62 Aligned_cols=74 Identities=14% Similarity=0.096 Sum_probs=48.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCC--CccEEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG--GADYCFE 279 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~vid 279 (390)
.++||+|+ |.+|...+..+... . +|+++++++++.+.+.+ ....+++..+- .+ .+.+.++..+ ++|.+|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEEE
Confidence 57999998 99999988877666 6 89999999887665543 21122332221 11 2233333333 7999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+.|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9874
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.031 Score=50.36 Aligned_cols=81 Identities=16% Similarity=0.145 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |.+|..++..+...|. +|+++++++++.+.+.+ .+.. ..+..+-.+..++.+.+.+... ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999998 9999999999998999 99999999877654432 2222 1222111011233333333322 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999884
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.054 Score=47.77 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=31.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|..+++.+...|..+++.++..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999899999966
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.023 Score=53.87 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCcE----EEcCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITD----FINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~~----v~~~~~~~~~~~~~~i~~~~~ 271 (390)
.|.+++|+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ .+... .+|-.+ +..+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 5889999998 9999998888888899 89999999988765422 22111 123222 01233344444444
Q ss_pred C-CccEEEEcccC
Q 016363 272 G-GADYCFECIGL 283 (390)
Q Consensus 272 ~-g~D~vid~~g~ 283 (390)
+ .+|++++++|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 4 67799998874
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.027 Score=51.28 Aligned_cols=79 Identities=23% Similarity=0.359 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ +..|... .+ |..+ ..++.+.+.+...
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999998 9999999998888899 899999988765433 2223222 22 2222 2233333333221
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 379999999885
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.04 Score=46.97 Aligned_cols=95 Identities=14% Similarity=0.268 Sum_probs=62.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|.|+|| |.+|...++=|+.+|. .|++++|++.|....+.. .++..+- -+..+.-..+ .|+|+||++.+.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q~Di---fd~~~~a~~l--~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQKDI---FDLTSLASDL--AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeecccc---cChhhhHhhh--cCCceEEEeccC
Confidence 5789999 9999999999999999 999999999998654321 1221111 1111111111 289999999886
Q ss_pred hH---------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 284 TS---------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 284 ~~---------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
.. ..+.++..|+. +.-|+..+|..+
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 51 23446677776 225777787543
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.028 Score=51.17 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.|.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++++... .+..+-.+..++.+.+.+... +++|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999998 9999999998888899 999998887665444 3344321 221111011223333333322 36999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9998874
|
|
| >COG0031 CysK Cysteine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.18 Score=46.83 Aligned_cols=59 Identities=22% Similarity=0.278 Sum_probs=46.2
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec---CChhhHHHHHhcCCcEEEcCC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD---INPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~---~~~~~~~~~~~~g~~~v~~~~ 255 (390)
+...+++|++|+=--+|.+|.+.+.+|+..|+ +++.+. .+++|++.++.+|++.++...
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 45569999966555569999999999999999 666554 356888999999998776554
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.029 Score=51.26 Aligned_cols=78 Identities=19% Similarity=0.250 Sum_probs=50.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+....+..+-.+..++.+.+.+... +++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899998 9999999999888999 8999999987765442 223222222221112233333333322 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 998874
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.09 Score=47.22 Aligned_cols=92 Identities=23% Similarity=0.223 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEecCC----hhh--------HHHHHhcCCcEEEcCCCCCCcCHHHHH
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRAS--KIIGVDIN----PEK--------FEIGKKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~--~Vi~~~~~----~~~--------~~~~~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
-.+.+|+|+|+|..|.+++..+...|+. +++.++++ .++ .++++.++... . + .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 4678999999999999999999999997 89999998 444 22334433211 0 1 2344444
Q ss_pred HhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
. ++|++|.+++........++.|.+. ..++.+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 2 4899999997443224667777766 5555443
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.073 Score=49.88 Aligned_cols=81 Identities=19% Similarity=0.174 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--H----HHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--F----EIGKKFGITDF-INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~----~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.+..+...|+ +|+.+.++.+. . +.++..+.... +..+-.+...+.+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4789999998 9999999999888999 88877654321 1 22333443322 21111011223333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 133 g~iD~lV~nAg~ 144 (300)
T PRK06128 133 GGLDILVNIAGK 144 (300)
T ss_pred CCCCEEEECCcc
Confidence 379999998874
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.028 Score=51.33 Aligned_cols=81 Identities=16% Similarity=0.236 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c-----CCcE-EEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GITD-FINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~-----g~~~-v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+.+ + +... ++..+-.+..++.+.+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999998 9999999999999999 89999998877654422 2 2221 221111012233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 85 g~id~li~~ag~ 96 (260)
T PRK07063 85 GPLDVLVNNAGI 96 (260)
T ss_pred CCCcEEEECCCc
Confidence 379999999884
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.03 Score=51.20 Aligned_cols=81 Identities=14% Similarity=0.211 Sum_probs=50.2
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEecCChhhHH---HH-HhcCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFE---IG-KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~Vi~~~~~~~~~~---~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.|.++||+|++ ++|.+.++.+...|+ +|+.++++++..+ .+ ++++....+..+-.+..++.+.+.+... +
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999973 899999999888999 8999888764332 22 2334323332221112233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|+++++.|.
T Consensus 88 ~ld~lv~nAg~ 98 (258)
T PRK07533 88 RLDFLLHSIAF 98 (258)
T ss_pred CCCEEEEcCcc
Confidence 79999998873
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.031 Score=51.55 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-h---cC--Cc-EEEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K---FG--IT-DFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~---~g--~~-~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+... + .+ .. .++..+-.+..++.+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3679999998 9999999999999999 8999999877654332 2 21 11 2221111111233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 85 ~~~d~li~~ag~ 96 (276)
T PRK05875 85 GRLHGVVHCAGG 96 (276)
T ss_pred CCCCEEEECCCc
Confidence 379999998873
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.032 Score=50.78 Aligned_cols=79 Identities=14% Similarity=0.157 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c---CCc-EEE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GIT-DFI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~---g~~-~v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ + +.. ..+ |..+ ..++...+.+...
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 5689999998 9999999999889999 99999998877654432 2 322 112 2222 2233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+.+|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 369999998874
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.032 Score=50.52 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c--CCc-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GIT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~--g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+...+ + +.. ..+..+-.+...+.+.+.+... +++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999998 9999999998888898 89999998876544322 2 322 2222111111223333333222 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.015 Score=53.46 Aligned_cols=77 Identities=19% Similarity=0.303 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
.+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+... +...+ .|..+ ..++.+.+.+... +.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEE
Confidence 3568999998 9999999998888899 8999999876654322 22211 22222 2334444444322 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999985
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.018 Score=51.04 Aligned_cols=101 Identities=19% Similarity=0.269 Sum_probs=65.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIG----KKFGITDF-INPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~ 267 (390)
+.+.+.+++|++||-+|+| .|..++-+++..|.. +|+.+++.++-.+.+ +.++.+.+ +...+ ...
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd-----g~~--- 134 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD-----GSE--- 134 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES------GGG---
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc-----hhh---
Confidence 3477889999999999875 478888888877743 699999888755444 34565432 22222 111
Q ss_pred hhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 268 EMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 268 ~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
-+... +||.|+-+.+-+......++.|+++ |+++.-
T Consensus 135 g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 135 GWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred ccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 11222 8999998877766567889999999 998863
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.035 Score=50.64 Aligned_cols=81 Identities=21% Similarity=0.325 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. ..+.. ..+..+-.+..++.+.+.++.. ++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 9999999998888999 9999999887765443 22322 1221111011223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 9999999874
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.033 Score=50.58 Aligned_cols=81 Identities=22% Similarity=0.293 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+.. ..+..+-.+..++.+.+.+... ++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 9999999998888899 899999998765433 233432 2221111011223333322211 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999998874
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.11 Score=46.38 Aligned_cols=103 Identities=16% Similarity=0.197 Sum_probs=63.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-------------------hhHHHH----HhcCCc-EEEcCCCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFEIG----KKFGIT-DFINPATC 257 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~~~----~~~g~~-~v~~~~~~ 257 (390)
+.++|+|+|.|++|..++..+...|+.++..++-.. .|.+.+ +...++ ++.-.+++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 467899999999999999999999998888777321 121222 222222 12111111
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHH-HhccCCceEEEEcccC
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFN-SSREGWGKTVILGVEM 308 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~-~l~~~~G~~v~~g~~~ 308 (390)
=-.+.+.++..+++|+|+||..+-.+--.++. |.+.. -.++..+..+
T Consensus 109 ---~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag 156 (263)
T COG1179 109 ---ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG 156 (263)
T ss_pred ---hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence 11344555666699999999998663333444 55544 6677666443
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.036 Score=50.68 Aligned_cols=80 Identities=19% Similarity=0.262 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
+.++||+|+ |.+|..+++.+...|+ +|+++++++.+.+.+ ...+... ++..+-.+...+.+.+.+... +++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 357999998 9999999999889999 999999987765433 2234322 221111111233333333322 269
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999999874
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.041 Score=50.35 Aligned_cols=81 Identities=21% Similarity=0.272 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c--CCc-EEEcCCCCCCcCHHHHHHhhc-CCCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GIT-DFINPATCGDKTVSQVIKEMT-DGGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~--g~~-~v~~~~~~~~~~~~~~i~~~~-~~g~D 275 (390)
++.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.. + +.. ..+..+-.+...+.+...... .+++|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999998 9999999998888999 89999999887655532 2 211 122111101122222222221 24799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99998875
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.034 Score=50.44 Aligned_cols=81 Identities=12% Similarity=0.122 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.+ .+.. ..+..+-.+..++.+.+.+... +.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999999999999 99999998776554422 2322 2222211011223333333322 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++.+.|.
T Consensus 86 id~li~~ag~ 95 (252)
T PRK07035 86 LDILVNNAAA 95 (252)
T ss_pred CCEEEECCCc
Confidence 9999998873
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.034 Score=51.55 Aligned_cols=81 Identities=17% Similarity=0.244 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc---CCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~---g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+. ++ +... ++..+-.+..++.+.+.... .++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888999 8999998876654432 22 3322 12211101122333333222 136
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999885
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.04 Score=49.50 Aligned_cols=79 Identities=23% Similarity=0.294 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-E--EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.+|||+|+ |.+|...++.+...|. +|+++++++++.+.+ +..+... + .|..+ ...+.+.+.+...
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3578999998 9999999998888899 899999998775443 2334332 2 12222 2233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|.++.++|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 368999998865
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.034 Score=50.59 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=51.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+... .+ |..+ ...+.+.+.+... +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 568999998 9999999999988999 9999999887654442 223222 12 2222 1223333333321 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.035 Score=50.67 Aligned_cols=77 Identities=17% Similarity=0.187 Sum_probs=52.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC-Cc-EE--EcCCCCCCcCHHHHHHhhc---CCCc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-IT-DF--INPATCGDKTVSQVIKEMT---DGGA 274 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g-~~-~v--~~~~~~~~~~~~~~i~~~~---~~g~ 274 (390)
.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. ++ .. .+ +|..+ ..++.+.+.+.. .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47999998 9999999998888999 99999999888766543 32 11 12 23322 223333333322 3479
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999999885
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.12 Score=50.25 Aligned_cols=101 Identities=18% Similarity=0.171 Sum_probs=69.2
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHH-HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
+..+--.+.+|||+|+|-+|..++..+...|..+|++.-|+.+|.+ +++++|+..+ ..+ ++.+.+. .+
T Consensus 171 ~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~-----el~~~l~-----~~ 239 (414)
T COG0373 171 RIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE-----ELLEALA-----EA 239 (414)
T ss_pred HHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH-----HHHHhhh-----hC
Confidence 3334347889999999999999999999999889999999999866 4567885432 221 1222222 59
Q ss_pred cEEEEcccChHHH---HHHHHHhccCCc-eEEEEccc
Q 016363 275 DYCFECIGLTSVM---NDAFNSSREGWG-KTVILGVE 307 (390)
Q Consensus 275 D~vid~~g~~~~~---~~~~~~l~~~~G-~~v~~g~~ 307 (390)
|+||.+++.++.+ ......++.... .+++++.+
T Consensus 240 DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 240 DVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred CEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 9999999876632 344455555423 45666644
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.034 Score=51.40 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=51.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC--c-EEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--T-DFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~--~-~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+. . .++ |..+ ..++.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 568999998 9999999998888899 99999998876654432 221 1 222 2222 223333 444322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999998874
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.035 Score=51.23 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=51.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFI--NPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.++||+|+ |.+|...++.+...|. +|+++++++++.+.+++ .+.. .++ |..+ ...+.+.+.+... +++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 57999998 9999999998888899 99999999887776654 2322 112 2222 1223333333222 37899
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.++|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998874
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.09 Score=46.26 Aligned_cols=81 Identities=32% Similarity=0.398 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
-.|.+|+|+|.|.+|..+++.+...|+ +|++.++++++.+.+.+ +++. .++..+ + ....+|+++-
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----l-------~~~~~Dv~vp 91 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----I-------YSVDADVFAP 91 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----h-------ccccCCEEEe
Confidence 367899999999999999999999999 99999999888776654 4643 333211 1 1116889986
Q ss_pred cccChHHHHHHHHHhc
Q 016363 280 CIGLTSVMNDAFNSSR 295 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~ 295 (390)
|..+.......++.|+
T Consensus 92 ~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 92 CALGGVINDDTIPQLK 107 (200)
T ss_pred cccccccCHHHHHHcC
Confidence 6554443455566665
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.097 Score=47.87 Aligned_cols=78 Identities=14% Similarity=0.274 Sum_probs=48.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCCh---hhHHHH-Hhc-CCc-EEE--cCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIG-KKF-GIT-DFI--NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~---~~~~~~-~~~-g~~-~v~--~~~~~~~~~~~~~i~~~~ 270 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.++++. ++.+.+ .++ +.. ..+ |-.+ ..+..+.+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4789999987 4999999998888999 898887653 333333 223 221 122 2222 233333444333
Q ss_pred C--CCccEEEEccc
Q 016363 271 D--GGADYCFECIG 282 (390)
Q Consensus 271 ~--~g~D~vid~~g 282 (390)
. +++|+++++.|
T Consensus 83 ~~~g~ld~lv~nag 96 (257)
T PRK08594 83 EEVGVIHGVAHCIA 96 (257)
T ss_pred HhCCCccEEEECcc
Confidence 2 47999999876
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.038 Score=49.97 Aligned_cols=81 Identities=22% Similarity=0.252 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+.. ..+..+-.+..++.+.+.+... ++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999998888999 9999999876654332 22222 2222211011222222222221 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 9999998884
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.078 Score=46.31 Aligned_cols=76 Identities=22% Similarity=0.245 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCcEE-EcCCCCCCcCHHHHHHhhcCCCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITDF-INPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~~v-~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+.+ + +.... .+..+ ..++.+.+ .++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~-----~~~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI-----KGA 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH-----hcC
Confidence 5789999997 9999998888888898 99999999887665533 2 22221 11111 11222222 268
Q ss_pred cEEEEcccChH
Q 016363 275 DYCFECIGLTS 285 (390)
Q Consensus 275 D~vid~~g~~~ 285 (390)
|+||.+++...
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999888665
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.04 Score=50.28 Aligned_cols=80 Identities=14% Similarity=0.113 Sum_probs=51.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCC--c-EEEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--T-DFINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~--~-~v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
+.+|||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ +.. + ..+..+-.+..++.+.+.+... +.+|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 468999998 9999999998888899 99999999887665433 221 1 1221111011233333333322 2689
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++.+.|.
T Consensus 81 ~lv~~ag~ 88 (257)
T PRK07024 81 VVIANAGI 88 (257)
T ss_pred EEEECCCc
Confidence 99998873
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.093 Score=47.22 Aligned_cols=100 Identities=17% Similarity=0.184 Sum_probs=60.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-------------------hHH----HHHhcCCcEEEcCCCCCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KFE----IGKKFGITDFINPATCGD 259 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-------------------~~~----~~~~~g~~~v~~~~~~~~ 259 (390)
..+|+|+|+|++|..++..+...|..+++.++...- |.+ .++++.++.-+...+
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--- 87 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--- 87 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence 468999999999999999999999989998885431 111 222333332222111
Q ss_pred cCH-HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 260 KTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 260 ~~~-~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+ .+.+.++...++|+|+||..+...-..+.+.....+-.++..+
T Consensus 88 ~~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~ 134 (231)
T cd00755 88 EFLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM 134 (231)
T ss_pred eecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 111 1233344444799999999987744445555544413444444
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.039 Score=49.88 Aligned_cols=80 Identities=20% Similarity=0.171 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+.. .++..+-.+...+.+.+..... ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999999988999 8999998887655442 22322 2222221011223333333222 36
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|.+.|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 999999887
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.031 Score=52.00 Aligned_cols=77 Identities=12% Similarity=-0.001 Sum_probs=52.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+.+++|+|+|+.+.+++..+..+|+++|+++.|+++|.+.+.+ ++.. .+.... ..+.+.... ..+|+||+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~-~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE-KAAEVLVS 196 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc-cCCCEEEE
Confidence 57899999999999999999999998899999999988766643 4321 111110 001111111 26999999
Q ss_pred cccChH
Q 016363 280 CIGLTS 285 (390)
Q Consensus 280 ~~g~~~ 285 (390)
|++...
T Consensus 197 aTp~g~ 202 (282)
T TIGR01809 197 TVPADV 202 (282)
T ss_pred CCCCCC
Confidence 988654
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.038 Score=50.64 Aligned_cols=79 Identities=16% Similarity=0.229 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.|.++||+|+ + ++|.+.++.+...|+ +|+.+++++...+.++ +.|....+ |-.+ ..+..+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 5788999998 4 799999988888999 8988887743222222 23433322 3222 2233333433322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 84 ~g~iDilVnnag~ 96 (260)
T PRK06603 84 WGSFDFLLHGMAF 96 (260)
T ss_pred cCCccEEEEcccc
Confidence 379999998873
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.05 Score=45.44 Aligned_cols=94 Identities=22% Similarity=0.152 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
..+.+++|+|+|.+|...++.+...|..+|++.++++++.+.+ ++++... .... .+..+. -+++|+|+
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEEL-----LAEADLII 86 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhc-----cccCCEEE
Confidence 4578999999999999999988888644899999998876654 4455321 0111 122111 13799999
Q ss_pred EcccChHH----HHHHHHHhccCCceEEEEc
Q 016363 279 ECIGLTSV----MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 279 d~~g~~~~----~~~~~~~l~~~~G~~v~~g 305 (390)
.|++.... .......++++ ..++.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~ 116 (155)
T cd01065 87 NTTPVGMKPGDELPLPPSLLKPG-GVVYDVV 116 (155)
T ss_pred eCcCCCCCCCCCCCCCHHHcCCC-CEEEEcC
Confidence 99987652 11222345555 5566664
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.062 Score=49.64 Aligned_cols=72 Identities=19% Similarity=0.066 Sum_probs=52.5
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+...+.+++|+|+|+.+.+++..+..+|+.+|+++.|+++|.+.+.+ ++. ++.+.+ ....+|+
T Consensus 117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~------------~~~~~~---~~~~~dl 181 (272)
T PRK12550 117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGY------------EWRPDL---GGIEADI 181 (272)
T ss_pred cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCC------------cchhhc---ccccCCE
Confidence 345556799999999999999999999999789999999988776644 331 111111 1126899
Q ss_pred EEEcccCh
Q 016363 277 CFECIGLT 284 (390)
Q Consensus 277 vid~~g~~ 284 (390)
||+|++..
T Consensus 182 vINaTp~G 189 (272)
T PRK12550 182 LVNVTPIG 189 (272)
T ss_pred EEECCccc
Confidence 99998743
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.044 Score=49.23 Aligned_cols=80 Identities=9% Similarity=0.057 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G- 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~- 272 (390)
+|.+++|+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ ++.+.+. .+.-+..+..++.+.+.+... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 8999999998888999 899999998876544 2334332 221121112233333333221 3
Q ss_pred CccEEEEccc
Q 016363 273 GADYCFECIG 282 (390)
Q Consensus 273 g~D~vid~~g 282 (390)
.+|++|.+.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6999999986
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.041 Score=50.08 Aligned_cols=81 Identities=21% Similarity=0.324 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--HHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
++.++||+|+ +++|.+.++.+...|+ +|++++++... .+.+++.+.+. .+..+-.+..++.+.+.+... +++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999998 9999999999999999 89888875432 23334445332 221111112333333433322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++++.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99998874
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.042 Score=51.91 Aligned_cols=79 Identities=15% Similarity=0.148 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc----C-Cc-EEE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----G-IT-DFI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~----g-~~-~v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
.|.+++|+|+ +++|.++++.+...|+ +|+.+++++++.+.+. ++ + .. .++ |-.+ ..+..+.+.++..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 4689999998 9999999998888999 9999999987755432 11 1 11 122 2222 1122222222222
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 379999998874
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.08 Score=49.00 Aligned_cols=94 Identities=18% Similarity=0.247 Sum_probs=66.3
Q ss_pred ccccchhhHHHHHHHHhC-CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC
Q 016363 182 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~-~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 259 (390)
.+||+....+..+ +..+ --.|.+|+|+|.|. +|.-++.++...|+ +|+...+..
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------- 192 (286)
T PRK14175 137 FVPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------- 192 (286)
T ss_pred CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence 4666555444433 4444 34799999999965 99999999999999 888776431
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|..
T Consensus 193 ~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 193 KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 12333333 58999999998864443 467877 888888864
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.051 Score=48.79 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=51.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
+.++||+|+ +++|.+.++.+...|+ +|+++++++++ .+.++..+...+ .|..+ ..++.+.+.+... +++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 468999998 9999999998888999 99999987654 334444553321 22222 2334444444332 269999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
+.+.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.037 Score=51.03 Aligned_cols=78 Identities=23% Similarity=0.313 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH-HHHh---cCCc-EE--EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKK---FGIT-DF--INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~---~g~~-~v--~~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.++||+|+ +++|.+.++.+...|+ +|++++++ ++.+ .+.+ .+.. .. .|-.+ ..++.+.+.+...
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999998888999 99999988 4433 2322 2322 12 22222 2233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 81 g~id~li~~Ag~ 92 (272)
T PRK08589 81 GRVDVLFNNAGV 92 (272)
T ss_pred CCcCEEEECCCC
Confidence 379999998874
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.036 Score=50.54 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCc--EEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT--DFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~--~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+.++||+|+ |.+|.+.+..+...|+ +|+.++++..+.+.+.+ .+.. ..+..+-.+..++.+.+.+... +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999998 9999999998888899 99999988776543321 2211 2222221111223333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++.+.|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 79999998874
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.037 Score=49.67 Aligned_cols=75 Identities=17% Similarity=0.227 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEE--cCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+.++||+|+ |.+|...++.+...|+++|+++++++++.+. .+.. .++ |..+ ..++.+.+.+. +.+|+|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~~--~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEAA--SDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHhc--CCCCEE
Confidence 4678999998 9999999999888998689999988776543 3222 222 2222 12222222221 268999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 998886
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.044 Score=49.90 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+.+.. +..+-.+...+.+.+.+.. .++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 9999999999999999 899999988665433 33444322 2111101122222222221 136
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 9999998875
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.043 Score=51.57 Aligned_cols=81 Identities=14% Similarity=0.158 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-Hhc-----CCc-EEEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF-----GIT-DFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~-----g~~-~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.+|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +++ +.. .++..+-.+..++.+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 5689999998 9999999998888899 999999987765432 111 111 1221111011223333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 94 ~~iD~li~nAg~ 105 (306)
T PRK06197 94 PRIDLLINNAGV 105 (306)
T ss_pred CCCCEEEECCcc
Confidence 279999998873
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.041 Score=50.81 Aligned_cols=80 Identities=24% Similarity=0.238 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.+++|+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+.. ..+..+-.+..++.+.+.+... ++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999999989999 8999999876654332 22332 1222111011223333333222 37
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|.+.|
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 999999987
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.085 Score=49.74 Aligned_cols=91 Identities=21% Similarity=0.405 Sum_probs=61.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.+|+|+|+|.+|.+.+..++..|. .+|++.++++++.+.+++.|....+. .+..+.+ ..+|+||.|++
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence 579999999999999998888874 38999999999888888877532111 1222222 26899999998
Q ss_pred ChHH---HHHHHHHhccCCceEEEEcc
Q 016363 283 LTSV---MNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 283 ~~~~---~~~~~~~l~~~~G~~v~~g~ 306 (390)
.... +......++++ ..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 7542 22233445555 56666553
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.022 Score=52.73 Aligned_cols=76 Identities=24% Similarity=0.238 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcE-EEcCCCCCCcCHHHHHHhhcCC-CccEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDG-GADYC 277 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~~~~~i~~~~~~-g~D~v 277 (390)
.+|+++||+|+|+.+.+++.-+...|+++|+++.|+.+|.+.+.+ ++... .+.... +.++... .+|++
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~---------~~~~~~~~~~dli 194 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA---------LADLEGLEEADLL 194 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc---------ccccccccccCEE
Confidence 358999999999999999999999998799999999999777754 33211 011000 0011111 48999
Q ss_pred EEcccChH
Q 016363 278 FECIGLTS 285 (390)
Q Consensus 278 id~~g~~~ 285 (390)
|++++-..
T Consensus 195 INaTp~Gm 202 (283)
T COG0169 195 INATPVGM 202 (283)
T ss_pred EECCCCCC
Confidence 99988544
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.048 Score=49.32 Aligned_cols=77 Identities=21% Similarity=0.260 Sum_probs=51.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----c--CCc-EEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GIT-DFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~--g~~-~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.. . +.. +++ |..+ ..++.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 468999998 9999998888888898 99999999887655432 1 211 222 2222 2234444443322
Q ss_pred -CCccEEEEccc
Q 016363 272 -GGADYCFECIG 282 (390)
Q Consensus 272 -~g~D~vid~~g 282 (390)
+++|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 37999999887
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.043 Score=49.86 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc----CCcE--E--EcCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GITD--F--INPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~----g~~~--v--~~~~~~~~~~~~~~i~~~~~ 271 (390)
++.+|||+|+ |.+|...+..+...|+ +|+.+++++++.+.+. ++ +... + .|-.+ ..++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 8999999887765442 22 2221 1 13222 2233333443322
Q ss_pred --CCccEEEEccc
Q 016363 272 --GGADYCFECIG 282 (390)
Q Consensus 272 --~g~D~vid~~g 282 (390)
+++|++|.+.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 36999999885
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.044 Score=50.61 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=52.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ ++.. ..+..+-.+..++.+.+.+... +++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999998 9999999998888898 89999999887766544 2221 2222111011233333333222 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999885
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.17 Score=48.21 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=66.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHH-HHcCCCeEEEecCChhhHHHHHh-----cCCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVDINPEKFEIGKK-----FGITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la-~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
..+...+++|+|+|..|...+..+ ...++++|.+.++++++.+.+.+ ++.+.. ... ++.+.+.
T Consensus 123 a~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~-----~~~~~~~----- 191 (325)
T PRK08618 123 AREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVN-----SADEAIE----- 191 (325)
T ss_pred cCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeC-----CHHHHHh-----
Confidence 334567899999999998777544 46688899999999988765532 343322 122 3444442
Q ss_pred CccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 273 g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
.+|+|+.|++..+ .... ..++++ -.++.+|...
T Consensus 192 ~aDiVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 192 EADIIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred cCCEEEEccCCCC-cchH-HhcCCC-cEEEecCCCC
Confidence 6899999999876 3344 888887 7888888654
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.051 Score=49.47 Aligned_cols=81 Identities=21% Similarity=0.366 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++.. ..+..+-.+..++.+.+.+... +++|+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678999998 9999999999988999 99999999887665543 3322 1222111112233333333322 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++.+.|.
T Consensus 84 li~~ag~ 90 (257)
T PRK07067 84 LFNNAAL 90 (257)
T ss_pred EEECCCc
Confidence 9998873
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.15 Score=43.18 Aligned_cols=87 Identities=20% Similarity=0.248 Sum_probs=59.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
.+|.++|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+..+ .+..+.+. ..|+||-|+..
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~s~~e~~~-----~~dvvi~~v~~ 67 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA--------DSPAEAAE-----QADVVILCVPD 67 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE--------SSHHHHHH-----HBSEEEE-SSS
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh--------hhhhhHhh-----cccceEeeccc
Confidence 368899999999999998888999 99999999999999888774332 13344443 36899999888
Q ss_pred hHHHHHHHH------HhccCCceEEEEc
Q 016363 284 TSVMNDAFN------SSREGWGKTVILG 305 (390)
Q Consensus 284 ~~~~~~~~~------~l~~~~G~~v~~g 305 (390)
.......+. .+.++ ..++.++
T Consensus 68 ~~~v~~v~~~~~i~~~l~~g-~iiid~s 94 (163)
T PF03446_consen 68 DDAVEAVLFGENILAGLRPG-KIIIDMS 94 (163)
T ss_dssp HHHHHHHHHCTTHGGGS-TT-EEEEE-S
T ss_pred chhhhhhhhhhHHhhccccc-eEEEecC
Confidence 665555433 34444 5555555
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.21 Score=45.87 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=61.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-------------------hH----HHHHhcCCcE-EEcCCCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KF----EIGKKFGITD-FINPATC 257 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-------------------~~----~~~~~~g~~~-v~~~~~~ 257 (390)
.+.+|+|+|+|++|..++..+...|..+++.++...- |. +.+.++.++. +...+++
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 5678999999999999999999999888888885421 11 1222333332 2212210
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
-. .+.+.++...++|+||||.+....-..+.+.....+-.++..|..
T Consensus 109 i~---~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 IT---PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred cC---hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 01 122333333479999999998653444445544442455656544
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.12 Score=46.47 Aligned_cols=81 Identities=11% Similarity=0.082 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHH----HHHhcCCc-EEEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~----~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
++.++||+|+ |++|...++.+...|+ +|+.+.++.. +.+ .+...+.. ..+..+-.+..++.+.+.+.. .+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5679999998 9999999999999999 7777765433 222 22233432 222221101122333333322 13
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 79999998884
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.042 Score=50.05 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH----HHHhcCCcEE---EcCCCCCCcCHHHHHHhhcC-
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE----IGKKFGITDF---INPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~----~~~~~g~~~v---~~~~~~~~~~~~~~i~~~~~- 271 (390)
-.+.+++|+|+ |++|...++.+...|++.|+++++++++.+ .++..+.... +|..+ ...+.+.+.....
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35688999998 999999999999999944999998876654 2233443321 22222 1223333322211
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 82 ~g~id~li~~ag~ 94 (260)
T PRK06198 82 FGRLDALVNAAGL 94 (260)
T ss_pred hCCCCEEEECCCc
Confidence 379999999884
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.038 Score=50.44 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---cCCcE-E--EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-F--INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++...+...+ .+.+. . .|..+ ..+..+.+.+... +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999988999 89999987543333332 34332 1 23222 1223333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++.+.|.
T Consensus 84 ~id~lv~nAg~ 94 (260)
T PRK12823 84 RIDVLINNVGG 94 (260)
T ss_pred CCeEEEECCcc
Confidence 79999998873
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.053 Score=48.80 Aligned_cols=81 Identities=23% Similarity=0.259 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCC-c---EEEcCCCCCCcC---HHHHHHhh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-T---DFINPATCGDKT---VSQVIKEM 269 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~-~---~v~~~~~~~~~~---~~~~i~~~ 269 (390)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. ..+. + .-+|..+....+ +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4679999998 9999999998888999 8999999987765442 1221 1 112221100112 23333333
Q ss_pred cCCCccEEEEcccC
Q 016363 270 TDGGADYCFECIGL 283 (390)
Q Consensus 270 ~~~g~D~vid~~g~ 283 (390)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33478999998884
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.064 Score=52.32 Aligned_cols=91 Identities=23% Similarity=0.218 Sum_probs=58.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHh--cCCc---EEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 206 VAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK--FGIT---DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~--~g~~---~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
|+|+|+|.+|..+++.+....-. +|++.+++.++.+.+.+ .+.. ..+|..+ . +.+.++.. +.|+||+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~-~~l~~~~~-~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----P-ESLAELLR-GCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----H-HHHHHHHT-TSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----H-HHHHHHHh-cCCEEEE
Confidence 78999999999999998877643 89999999999877754 2221 2233322 2 22444433 5699999
Q ss_pred cccChHHHHHHHHHhccCCceEEEE
Q 016363 280 CIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
|+|.......+-.|+..+ -.++..
T Consensus 74 ~~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CCccchhHHHHHHHHHhC-CCeecc
Confidence 999765455566666666 677763
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.051 Score=49.48 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c-----CCcE-EE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GITD-FI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~-----g~~~-v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ + +.+. .+ |..+ ..++.+.+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4789999998 9999999999999999 89999998877654432 1 2221 12 2221 1223333333221
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 379999999985
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.041 Score=50.89 Aligned_cols=79 Identities=20% Similarity=0.255 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCC--c-EEE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--T-DFI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~--~-~v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ .+++. . ..+ |-.+ ...+.+.+.+... +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 4678999998 9999999998888899 999999887665433 23321 1 122 2222 1223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 79999998874
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.053 Score=49.48 Aligned_cols=79 Identities=20% Similarity=0.231 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCc-EEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~-~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
.+.++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ + +.. ..+..+-.+..++.+.+.+. +++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence 4789999998 9999999998888999 99999999877654322 1 322 22221110112222222221 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.055 Score=49.25 Aligned_cols=81 Identities=14% Similarity=0.215 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HH----HHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FE----IGKKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~----~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ +++|.+.++.+...|+ +|++++++.++ .+ .++..+... .+..+-.+..++.+.+.+... +
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4679999998 9999999999999999 89999876542 22 223334322 222121112233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|++|.+.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.06 Score=48.91 Aligned_cols=81 Identities=25% Similarity=0.329 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ..+... .+..+-.+..++.+.+.++.. ++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999998 9999999998888999 9999999877654432 223222 221111111223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++.+.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 9999999874
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.069 Score=48.59 Aligned_cols=75 Identities=21% Similarity=0.274 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++. +.+... .+....+..+- .+. +.+.+.. +++|++|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~---~~~-~~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWEC---GKE-ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeC---CCH-HHHHHhc-CCCCEEEE
Confidence 3689999998 9999999999889999 9999988762 222211 11122222111 122 2233322 36999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9875
|
|
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.055 Score=56.44 Aligned_cols=77 Identities=29% Similarity=0.310 Sum_probs=56.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh---------------------hHHHHHhcCCcEEEcCCCCCCc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. +.++++++|.+..++..-..+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8988887653 4567778888766654321112
Q ss_pred CHHHHHHhhcCCCccEEEEcccCh
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
++.+ +. .++|.||.++|..
T Consensus 388 ~~~~----l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSD----LT-SEYDAVFIGVGTY 406 (639)
T ss_pred CHHH----HH-hcCCEEEEeCCCC
Confidence 2322 21 2699999999964
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.052 Score=49.77 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=49.5
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ +++|.+.++.+...|+ +|+.+.+++...+.+++ ++....+..+-.+..+..+.+.+... +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5789999984 5899999998888999 89888765433333322 34322222221112333333433332 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999998874
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.14 Score=42.36 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=28.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
+|+|+|+|++|...+..+...|..++..++..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999888888754
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.055 Score=54.19 Aligned_cols=78 Identities=24% Similarity=0.370 Sum_probs=55.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh---------------------hhHHHHHhcCCcEEEcCCCCCCc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP---------------------EKFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
++++|+|+|+|+.|+.++..++..|. +|+.++..+ ...++++++|.+..++..- ..
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v--~~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV--GR 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe--CC
Confidence 67899999999999999999999999 788887654 2456677888876655422 01
Q ss_pred CHHHHHHhhcCCCccEEEEcccChH
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLTS 285 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~~ 285 (390)
++ .+.++. .++|.||.++|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 11 111211 26999999999754
|
This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli. |
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.053 Score=49.43 Aligned_cols=81 Identities=14% Similarity=0.211 Sum_probs=50.5
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc--EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.|+++||+|++ ++|.+.++.+...|+ +|+.++++++..+.++++... ..+..+-.+..+..+.+.+... +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999874 899999998888999 899998875434444444221 1221111112233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++++.|.
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 999998873
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.035 Score=51.59 Aligned_cols=95 Identities=17% Similarity=0.058 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
..+.+++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+.+ ++....+.. + .+..+.+ ..+|+||+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~~-----~~~DivIn 191 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEEL-----ADFDLIIN 191 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhcc-----ccCCEEEE
Confidence 457789999999999999999999996699999999988766643 332110111 1 0111111 26999999
Q ss_pred cccChHHH-----HHHHHHhccCCceEEEEc
Q 016363 280 CIGLTSVM-----NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 280 ~~g~~~~~-----~~~~~~l~~~~G~~v~~g 305 (390)
|++....- ......+++. ..++++-
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~Div 221 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMI 221 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence 98865410 1223556665 6666664
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.096 Score=48.72 Aligned_cols=44 Identities=23% Similarity=0.203 Sum_probs=38.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
..+.++||+|+|+.+.+++..+...|+++++++.|+.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34789999999999999999888899889999999998876664
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.051 Score=51.48 Aligned_cols=78 Identities=21% Similarity=0.178 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcC---Cc-EEE--cCCCCCCcCHHHHHHhhc--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---IT-DFI--NPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g---~~-~v~--~~~~~~~~~~~~~i~~~~--~ 271 (390)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++. .. .++ |-.+ ..++.+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999998 9999999998888898 9999999887765442 232 11 122 2222 122222233321 2
Q ss_pred CCccEEEEccc
Q 016363 272 GGADYCFECIG 282 (390)
Q Consensus 272 ~g~D~vid~~g 282 (390)
+++|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 26999999887
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.13 Score=48.19 Aligned_cols=102 Identities=15% Similarity=0.146 Sum_probs=62.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh--hhHHHH----HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~--~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
++.++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+.+ ++.+... .+ |-.+ ..++.+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 5679999998 9999999999888999 888877543 233333 2234322 22 2222 1233333333322
Q ss_pred --CCccEEEEcccChH--------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 272 --GGADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 272 --~g~D~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+++|+++.+.|... .++.++..++.+ |+++.++..
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 37999998877310 123444555666 899888753
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.11 Score=50.46 Aligned_cols=45 Identities=31% Similarity=0.380 Sum_probs=36.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
.|.+|.|+|.|.+|+..++.++..|. +|++.+++....+..+.++
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 57899999999999999999999999 9999998764444333444
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.061 Score=49.80 Aligned_cols=102 Identities=12% Similarity=0.215 Sum_probs=65.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChh---hHHHH-HhcCCcEEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIG-KKFGITDFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~---~~~~~-~~~g~~~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.++++||+|+ +++|.+.++.+...|+ +|+.++++++ +.+.+ .+++....+ |-.+ ...+.+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4789999987 4899999998888999 8999888753 33333 334533332 3222 2233333333322
Q ss_pred -CCccEEEEcccChH-----------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 272 -GGADYCFECIGLTS-----------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 272 -~g~D~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+++|+++++.|... ..+..+..|.+. |+|+.++..
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 37999999988410 134555677777 899888753
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.064 Score=48.81 Aligned_cols=81 Identities=17% Similarity=0.236 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+.+++++. ..+.++..+... .+..+-.+..++.+.+.+... +++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999998 9999999999999999 8888876532 223344444321 222221111233333333322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.063 Score=48.82 Aligned_cols=79 Identities=16% Similarity=0.277 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+.. ..+ |..+ ..++.+.+.+...
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999998 9999999998888899 999999988765443 233422 122 2222 2233333433322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 378999998884
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.044 Score=49.78 Aligned_cols=75 Identities=16% Similarity=0.230 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++ ...+.. ..+ |..+ ..++.+.+.+... +++|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4789999998 9999999999888999 99999988765 112221 122 2222 1233333333222 3789
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|.+.|.
T Consensus 78 ~vi~~ag~ 85 (252)
T PRK07856 78 VLVNNAGG 85 (252)
T ss_pred EEEECCCC
Confidence 99998873
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.03 Score=55.77 Aligned_cols=93 Identities=14% Similarity=0.110 Sum_probs=61.8
Q ss_pred HHhCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVA----IFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~Vl----I~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~ 269 (390)
...++++|+.+| |+|+ |++|.+++|+++.+|+ .|+++...+.+....+..+.+ .+++... ..+.+.+..+
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence 456778899888 8876 9999999999999999 999988776654444434444 3444433 2333333322
Q ss_pred cCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 270 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
. ......++.|.++ |+++.++..
T Consensus 103 ~--------------~~~~~~l~~l~~~-griv~i~s~ 125 (450)
T PRK08261 103 Y--------------EFFHPVLRSLAPC-GRVVVLGRP 125 (450)
T ss_pred H--------------HHHHHHHHhccCC-CEEEEEccc
Confidence 1 1245566777777 788877754
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.13 Score=47.54 Aligned_cols=77 Identities=19% Similarity=0.281 Sum_probs=49.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhc-CCCc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMT-DGGA 274 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~-~~g~ 274 (390)
+++++|+|+|++|.+.+..+. .|+ +|+.+++++++.+.+. ..+.+. ++ |-.+ ..++.+.+.+.. -+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 357889999999999888775 798 9999999877654432 223322 22 2222 223333333321 1379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999999985
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.29 Score=38.56 Aligned_cols=74 Identities=23% Similarity=0.294 Sum_probs=55.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 285 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~ 285 (390)
|+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+. .-.+.+++..-..+|.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence 6788999999999999999776 899999999999999988854 333222 2344555553348999998888766
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.071 Score=48.08 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=48.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EE--EcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DF--INPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+.. .. .|-.+ ..++.+.+.+. ....|.++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQL-PFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhc-ccCCCEEEE
Confidence 47899998 9999998888888899 899999998887766553321 22 22222 22333333332 124677776
Q ss_pred ccc
Q 016363 280 CIG 282 (390)
Q Consensus 280 ~~g 282 (390)
+.|
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 665
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.16 Score=47.32 Aligned_cols=84 Identities=20% Similarity=0.172 Sum_probs=50.4
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HH----HHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FE----IGKKFGITD-FINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~----~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~ 271 (390)
..-++.++||+|+ |.+|...+..+...|+ +|+.+++++++ .+ .++..+.+. ++..+-.+...+.+.+.+...
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 3445789999998 9999999998888899 89888877532 22 222234332 222111011223333333221
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 121 ~~~~iD~lI~~Ag~ 134 (290)
T PRK06701 121 ELGRLDILVNNAAF 134 (290)
T ss_pred HcCCCCEEEECCcc
Confidence 379999988874
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.32 Score=42.45 Aligned_cols=103 Identities=16% Similarity=0.276 Sum_probs=60.3
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
....+++++++||=+|+| .|..++.+++.. +. +|++++.+++..+.+++ ++.+.+-... .+..+.+..+
T Consensus 33 ~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~-~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~----~d~~~~~~~~ 106 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKG-RVIAIERDEEVVNLIRRNCDRFGVKNVEVIE----GSAPECLAQL 106 (196)
T ss_pred HHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE----CchHHHHhhC
Confidence 455678899998888763 233444555544 44 99999999988776653 4543221111 1232223222
Q ss_pred cCCCccEE-EEcccC-hHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYC-FECIGL-TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~v-id~~g~-~~~~~~~~~~l~~~~G~~v~~g 305 (390)
. ..+|.+ ++.... ...++.+.+.|+++ |+++...
T Consensus 107 ~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~ 142 (196)
T PRK07402 107 A-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATA 142 (196)
T ss_pred C-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 2 234444 443322 24477888999998 9988664
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.06 Score=48.58 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.+|||+|+ |.+|...+..+...|+ +|+++++++++...+ +..+.+. ++..+-.+..++.+.+.+... ++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999998888899 999999987654433 2233221 221111011223333333222 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+||.+.|.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 9999998864
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.059 Score=49.86 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ..+.+. .+..+-.+..++.+.+.+... ++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4788999998 9999999999888999 8999998877655432 234322 121111011223333332221 36
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 9999998874
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.086 Score=45.05 Aligned_cols=81 Identities=22% Similarity=0.187 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.+++|+|+ +++|...+..+...|+ +|+.++++.+..+.. .+.+... .+..+-.+..++.+.+.+.. -++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5779999998 8999999998888898 999999887655332 2234332 22222101122222222221 136
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8888888773
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.059 Score=48.83 Aligned_cols=78 Identities=22% Similarity=0.355 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE-EE--cCCCCCCcCHHHHHHhhc--CC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FI--NPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~-v~--~~~~~~~~~~~~~i~~~~--~~ 272 (390)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.. .+... .+ |..+ ..++.+.+.+.. .+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence 357999998 9999999998888999 99999998877655533 23221 22 2222 223333333332 12
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+||.+.+.
T Consensus 78 ~~d~vi~~a~~ 88 (255)
T TIGR01963 78 GLDILVNNAGI 88 (255)
T ss_pred CCCEEEECCCC
Confidence 69999988764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.064 Score=48.81 Aligned_cols=80 Identities=15% Similarity=0.215 Sum_probs=50.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc--EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT--DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~--~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ +... ..+..+-.+..++.+.+.+... +++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999998 9999999988888898 89999998887654432 3211 1221111011223333333222 26999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (257)
T PRK07074 81 LVANAGA 87 (257)
T ss_pred EEECCCC
Confidence 9999874
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.067 Score=48.88 Aligned_cols=81 Identities=23% Similarity=0.295 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---cCCcE-EEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-FINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.+.++||+|+ |.+|...++.+...|+ +|+.++++++..+...+ .+... .+..+-.+..++.+.+.+... +.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999998 9999999998888999 89999988754433332 23221 221111011223333333222 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999998884
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.072 Score=49.20 Aligned_cols=83 Identities=16% Similarity=0.256 Sum_probs=51.0
Q ss_pred CCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCCh---hhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcC-
Q 016363 200 VEVGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 200 ~~~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~---~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~- 271 (390)
+-.+.++||+|+ +++|.+.++.+...|+ +|+.+.+++ ++.+.+ ++++....+..+-.+..+..+.+.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 445789999987 5899999999989999 898887764 333333 3345322222221112233333333322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 86 ~g~iD~lv~nAG~ 98 (272)
T PRK08159 86 WGKLDFVVHAIGF 98 (272)
T ss_pred cCCCcEEEECCcc
Confidence 379999998873
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.068 Score=48.44 Aligned_cols=76 Identities=14% Similarity=0.210 Sum_probs=51.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcE-EE--cCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FI--NPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
+|+|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+.. ++.+. .+ |-.+ ..++.+.+.+... +++|.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 6899998 9999999999988999 99999999887766543 44332 12 2222 1233333333322 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998874
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.067 Score=48.06 Aligned_cols=81 Identities=17% Similarity=0.268 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.+++|+|+ |.+|...+..+...|+ +|+++++++++.+.+ +..+... ++..+-.+..++.+.+++... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888999 999999988765443 2233222 222221112233333443322 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 9999998874
|
|
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.093 Score=48.31 Aligned_cols=105 Identities=16% Similarity=0.259 Sum_probs=72.9
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEE--cCCCCCCc
Q 016363 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFI--NPATCGDK 260 (390)
Q Consensus 190 A~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~--~~~~~~~~ 260 (390)
++..+.+..++++|++||=+|+|- |.+++-+|+..|+ +|++++-|++..+.+++ .|.. .+. ++.+
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd---- 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD---- 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence 444566889999999999999853 5566777888899 99999999998776644 4543 111 2221
Q ss_pred CHHHHHHhhcCCCccEEE-----EcccCh---HHHHHHHHHhccCCceEEEEcccCCC
Q 016363 261 TVSQVIKEMTDGGADYCF-----ECIGLT---SVMNDAFNSSREGWGKTVILGVEMHG 310 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vi-----d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~~~ 310 (390)
.. +.||-|+ +.+|.. .-++.+.+.|+++ |++.+.......
T Consensus 134 --------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 134 --------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred --------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 11 2477774 455542 2367788899999 999888765543
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.076 Score=47.44 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=49.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEE-EcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+++|+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+ ..++.+.+.+.. +++|+++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-HHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-hcCcEEEECC
Confidence 5899998 9999999999888999 999999998877655 33444332 22222 122333333322 3689999886
Q ss_pred c
Q 016363 282 G 282 (390)
Q Consensus 282 g 282 (390)
|
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 5
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.04 Score=46.43 Aligned_cols=80 Identities=24% Similarity=0.235 Sum_probs=49.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC--hhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN--PEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~--~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
+++||+|+ +++|.+.++.+...|..+|+.+.++ .++.+.+ +..+... ++..+-.+..++...+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899998 9999998888887777688899988 4444333 3345322 22221111123333343333 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998886
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.23 Score=44.82 Aligned_cols=105 Identities=19% Similarity=0.188 Sum_probs=60.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhH----HHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKF----EIGKKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~----~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |.+|...++-+...|+ +|+.+.++ .++. ..+++.+... .+..+-.+..++.+.+.++.. +
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 3678999998 9999999988888999 77766543 2222 2223344321 221111011223333333322 3
Q ss_pred CccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 273 GADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 273 g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
++|++|.+.|... ..+.+.+.++.. |+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 7999999998300 123445566666 8999888543
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.084 Score=47.74 Aligned_cols=84 Identities=19% Similarity=0.204 Sum_probs=53.5
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc--EEE--cCCCCCCcCHHHHHHhh
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT--DFI--NPATCGDKTVSQVIKEM 269 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~--~v~--~~~~~~~~~~~~~i~~~ 269 (390)
...++.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+.. .++ +....+..++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3557889999998 9999999998888899 999999988765433 233322 122 22110112333333333
Q ss_pred cC--CCccEEEEcccC
Q 016363 270 TD--GGADYCFECIGL 283 (390)
Q Consensus 270 ~~--~g~D~vid~~g~ 283 (390)
.. +.+|.+|.+.+.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 269999988764
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.26 Score=42.85 Aligned_cols=98 Identities=15% Similarity=0.144 Sum_probs=59.7
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
..++++++||-+|+| .|..++.+++.. +. +|++++.+++..+.+++ .+.+.+ .... .+..+ +. . .+
T Consensus 41 ~~l~~g~~VLDiGcG-tG~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~-~~-~-~~ 111 (187)
T PRK00107 41 PYLPGGERVLDVGSG-AGFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE-FG-Q-EE 111 (187)
T ss_pred hhcCCCCeEEEEcCC-CCHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh-CC-C-CC
Confidence 345668999999874 234444444444 45 99999999987766643 444322 1111 12222 11 1 23
Q ss_pred CccEEEEcccC--hHHHHHHHHHhccCCceEEEEc
Q 016363 273 GADYCFECIGL--TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 273 g~D~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+|+|+..... ...++.+.+.|+++ |+++.+-
T Consensus 112 ~fDlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 112 KFDVVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred CccEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 89999953322 23467788999999 9988763
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.11 Score=47.98 Aligned_cols=92 Identities=15% Similarity=0.081 Sum_probs=59.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcC---CcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
...+.+++|+|+|++|.+++..+...|+ +|+++.+++++.+.+. .+. ....+. +.+ .....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~--------~~~----~~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS--------MDE----LPLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec--------hhh----hcccCcc
Confidence 3457899999999999999988888898 9999999988765543 332 112211 111 1113699
Q ss_pred EEEEcccChHH--H---HHHHHHhccCCceEEEEc
Q 016363 276 YCFECIGLTSV--M---NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 276 ~vid~~g~~~~--~---~~~~~~l~~~~G~~v~~g 305 (390)
+||+|++.... . ......++++ ..++.+.
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~ 214 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMV 214 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEec
Confidence 99999986421 1 1123456665 5666664
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.081 Score=47.59 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
++.++||+|+ |.+|...++.+...|+ .|+..+++.++.+.+. .++.. .++..+-.+...+.+.+.+... +++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4679999998 9999999998888998 8988888877766553 34432 2222111011223332222221 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999884
|
|
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.21 Score=44.29 Aligned_cols=107 Identities=19% Similarity=0.200 Sum_probs=73.5
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCcEE-EcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDF-INPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~~v-~~~~~~~~~~~~~~i~ 267 (390)
|...++.+...+||=+|. .+|..++.+|..+. -.+++.++.++++.+.+++ .|.+.. .-... .+..+.+.
T Consensus 51 L~~L~~~~~~k~iLEiGT-~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~---gdal~~l~ 126 (219)
T COG4122 51 LRLLARLSGPKRILEIGT-AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG---GDALDVLS 126 (219)
T ss_pred HHHHHHhcCCceEEEeec-ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec---CcHHHHHH
Confidence 345567778888988875 35777788888775 3389999999999887764 565442 21110 25566666
Q ss_pred hhcCCCccEEE-EcccC--hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+...+.||.|| |+--. +..++.+++.|+++ |.++.--
T Consensus 127 ~~~~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN 166 (219)
T COG4122 127 RLLDGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADN 166 (219)
T ss_pred hccCCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence 63345899997 55443 34578999999998 8887544
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.088 Score=48.38 Aligned_cols=80 Identities=14% Similarity=0.180 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ + ++|.+.++.+...|+ +|+.+++++.-.+.+++ .+....+..+-.+..++.+.+.+... +
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 4789999998 4 799999998888999 89888876321222322 22222222111112233333433322 3
Q ss_pred CccEEEEccc
Q 016363 273 GADYCFECIG 282 (390)
Q Consensus 273 g~D~vid~~g 282 (390)
.+|++|++.|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 6999999987
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.088 Score=53.13 Aligned_cols=73 Identities=15% Similarity=0.234 Sum_probs=53.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC-CcE-EEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-ITD-FINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g-~~~-v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+.+ ++ ... +...+ ++.+.+ ..+|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~-----dl~~al-----~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD-----EMLACA-----AEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh-----hHHHHH-----hcCCEEEE
Confidence 6899999999999999999999998789999999988776654 53 221 11111 222222 26999999
Q ss_pred cccChH
Q 016363 280 CIGLTS 285 (390)
Q Consensus 280 ~~g~~~ 285 (390)
|++...
T Consensus 336 AT~s~~ 341 (519)
T PLN00203 336 STSSET 341 (519)
T ss_pred ccCCCC
Confidence 987655
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.11 Score=47.05 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=30.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
+.+|+|+|+|++|..+++.+...|..+++.++..
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3789999999999999999999999888888754
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.13 Score=49.90 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=36.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.+++....+...+.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 57899999999999999999999999 9999998754444444444
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.083 Score=48.09 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=61.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC--CcEE-EcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDF-INPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g--~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+.+|||+|+ |.+|...++.+...|. +|+++.+++++.......+ ...+ .|..+ . .+.+.+....++|+|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~~~~d~v 89 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIGDDSDAV 89 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhhcCCCEE
Confidence 4679999998 9999999998888898 8999999887754332211 2222 12221 1 122323222279999
Q ss_pred EEcccChH-------------HHHHHHHHhccC-CceEEEEccc
Q 016363 278 FECIGLTS-------------VMNDAFNSSREG-WGKTVILGVE 307 (390)
Q Consensus 278 id~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 307 (390)
|.+.|... ....+++.+... .++++.++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 98876421 123445555443 1578887753
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.14 Score=47.76 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
..+.+++|+|+|++|.+++..+...|+++|+++.|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578999999999999999888899996799999986
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.46 Score=35.98 Aligned_cols=85 Identities=18% Similarity=0.285 Sum_probs=56.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEE-EecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 205 TVAIFGLGAVGLAVAEGARLNR---ASKII-GVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g---~~~Vi-~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
+|.|+|+|.+|.+.+.-+...| . +|+ +..+++++.+.+. +++..... .+..+.++ ..|+||-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----~advvil 67 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-------DDNEEAAQ-----EADVVIL 67 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-------EEHHHHHH-----HTSEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-------CChHHhhc-----cCCEEEE
Confidence 5788899999999999888888 6 788 4499999987774 46643322 13444444 3899999
Q ss_pred cccChHHHHHHHHHh---ccCCceEEEE
Q 016363 280 CIGLTSVMNDAFNSS---REGWGKTVIL 304 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l---~~~~G~~v~~ 304 (390)
|+.-.. +...++.+ .++ ..++++
T Consensus 68 av~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 999776 55544444 334 455544
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.061 Score=48.12 Aligned_cols=74 Identities=16% Similarity=0.163 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcCC-CccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~-g~D~vi 278 (390)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++. +... ...|..+ ...+.+.+.+.... +.|++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD--IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence 3578999998 9999999999889998 999999887651 2211 1122222 22334444444333 789999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98874
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.11 Score=48.30 Aligned_cols=96 Identities=19% Similarity=0.174 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC------C--c---EEEcCCCCCCcCHHHHHHhh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG------I--T---DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g------~--~---~v~~~~~~~~~~~~~~i~~~ 269 (390)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.++++- . + .++. .|..+.+..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 4567999998854 666667777767669999999998888777631 1 1 1221 233334433
Q ss_pred cCCCccEEEEcccC----------hHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCFECIGL----------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.+|+||--... ...++.+.+.|+++ |.++.-.
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 34489999843211 12246778999998 9988653
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.24 Score=44.93 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=30.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhhH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~~ 240 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.+. +++++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4679999998 9999999999999999 787764 444443
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.32 Score=47.44 Aligned_cols=95 Identities=13% Similarity=-0.030 Sum_probs=60.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vi 278 (390)
...+|||+|+ .+.|+..++.++..|. +|++++.++......... .....+.....+...+.+.+.++... ++|++|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI 81 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI 81 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 3578999998 6799999999999999 999999886554322221 11122322221234577777777666 899999
Q ss_pred EcccChHHHHHHHHHhccC
Q 016363 279 ECIGLTSVMNDAFNSSREG 297 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~~ 297 (390)
-+......+......+.+.
T Consensus 82 P~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 82 PTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred ECChHHHhHHhhhhhhcCC
Confidence 7776432233333445443
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.058 Score=48.02 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=64.6
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i 266 (390)
+.+...++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.+++ .|.+. ++.. +..+..
T Consensus 69 ~~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~------d~~~~~ 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG------DGTQGW 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC------CcccCC
Confidence 3466789999999999875 35555667776542 269999999887766643 44332 2221 111111
Q ss_pred HhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
...+.||+|+-..........+.+.|+++ |+++..
T Consensus 142 --~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 --EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred --cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 01137999985544444467788999998 998754
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.13 Score=48.56 Aligned_cols=87 Identities=15% Similarity=0.206 Sum_probs=55.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++++.. +...+.. . .++.+.+. ..|+|+.+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~-~----~~l~e~l~-----~aDvvv~~l 198 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAG-R----EELSAFLS-----QTRVLINLL 198 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeecc-c----ccHHHHHh-----cCCEEEECC
Confidence 57899999999999999999999999 9999987654321 1111110 0 12333322 467777666
Q ss_pred cChHHH-----HHHHHHhccCCceEEEEc
Q 016363 282 GLTSVM-----NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~~-----~~~~~~l~~~~G~~v~~g 305 (390)
+..... ...++.|+++ ..+|.+|
T Consensus 199 Plt~~T~~li~~~~l~~mk~g-a~lIN~a 226 (312)
T PRK15469 199 PNTPETVGIINQQLLEQLPDG-AYLLNLA 226 (312)
T ss_pred CCCHHHHHHhHHHHHhcCCCC-cEEEECC
Confidence 643322 2345566666 6666665
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.11 Score=48.78 Aligned_cols=98 Identities=18% Similarity=0.214 Sum_probs=63.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CC------c---EEEcCCCCCCcCHHHHHHhh
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI------T---DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~------~---~v~~~~~~~~~~~~~~i~~~ 269 (390)
....++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.++++ .. + .++. .|..+.+++.
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~------~Da~~~l~~~ 161 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI------GDGVEFLKNA 161 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE------ChHHHHHhhc
Confidence 45678999998865 55666778876666899999888877777663 11 1 1111 2333344443
Q ss_pred cCCCccEEE-EcccC---------hHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.++.+|+|| |+... ...++.+.+.|+++ |.++.-+
T Consensus 162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 344899998 43321 12366788999999 9987654
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.087 Score=47.31 Aligned_cols=71 Identities=13% Similarity=0.136 Sum_probs=51.1
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
|+|+|+ |.+|...++.+...+. +|.+++|++. ..+.++..|+..+. .+- +-.+.+.+... |+|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~-~d~----~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVE-ADY----DDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEE-S-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEee-ccc----CCHHHHHHHHc-CCceEEeecC
Confidence 789998 9999999999998888 8999999874 35667778886543 221 11233333332 7999999888
Q ss_pred C
Q 016363 283 L 283 (390)
Q Consensus 283 ~ 283 (390)
.
T Consensus 74 ~ 74 (233)
T PF05368_consen 74 P 74 (233)
T ss_dssp C
T ss_pred c
Confidence 3
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.085 Score=48.08 Aligned_cols=80 Identities=20% Similarity=0.230 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++++ ++.+.+ .+.+.+ ..+..+-.+...+.+.+.+... ++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 89998877 333222 233432 2222221011223333333322 36
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999998874
|
|
| >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.086 Score=55.21 Aligned_cols=78 Identities=28% Similarity=0.307 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh---------------------hHHHHHhcCCcEEEcCCCCCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~~g~~~v~~~~~~~~ 259 (390)
..+.+|+|+|+|+.|++++..+...|+ +|+++++.+. ..+.++++|.+...+..-..+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358899999999999999999999999 8998886543 345566777654443221001
Q ss_pred cCHHHHHHhhcCCCccEEEEcccCh
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
-++.+ +. .++|.||.++|..
T Consensus 404 i~~~~-~~----~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISLES-LL----EDYDAVFVGVGTY 423 (654)
T ss_pred CCHHH-HH----hcCCEEEEeCCCC
Confidence 12211 11 2699999988863
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.089 Score=47.87 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.+|||+|+ +++|...+..+...|+ +|+.++++.++.+.+ +..+.+ .++ |..+ ..++.+.+.....
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999998888999 899998887765443 223332 222 2222 1223333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.14 Score=48.88 Aligned_cols=36 Identities=31% Similarity=0.251 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.+.+|+|+|+|++|..++..+...|..+++.++...
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 346899999999999999999999998888888753
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.075 Score=46.62 Aligned_cols=99 Identities=16% Similarity=0.238 Sum_probs=60.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
+.....++.+||-+|+|. |..++.+++. |. +|++++.+++-++.+++ .+...+ .... .++.+. .+ +
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~--~~-~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNNL--TF-D 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhhC--Cc-C
Confidence 445566778999999864 6667777764 77 99999999987666544 222211 1110 122111 11 2
Q ss_pred CCccEEEEcccC--------hHHHHHHHHHhccCCceEEEEc
Q 016363 272 GGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 272 ~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+|+|+.+..- ...+..+.+.|+++ |.++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 379999875431 12356777889999 9865543
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.093 Score=47.73 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+.++ ++..+.++..+...+ .|-.+ ..++.+.+.+... +++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4688999998 9999999999888999 78776544 334444444333222 22222 2233333333322 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998875
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.26 Score=45.85 Aligned_cols=138 Identities=20% Similarity=0.278 Sum_probs=79.4
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
+|.+|..-....++++.+++.| +......|++. +.-. ..+++|.+||=+|+| .|.+++. |..+|+.+|++++
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAF----GTG~HpTT~lc-L~~Le~~~~~g~~vlDvGcG-SGILaIA-a~kLGA~~v~g~D 192 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAF----GTGTHPTTSLC-LEALEKLLKKGKTVLDVGCG-SGILAIA-AAKLGAKKVVGVD 192 (300)
T ss_pred CCccCCCCCCceEEEEcccccc----CCCCChhHHHH-HHHHHHhhcCCCEEEEecCC-hhHHHHH-HHHcCCceEEEec
Confidence 3555433223566777666644 34445555554 3222 346799999999984 2444433 3456887899999
Q ss_pred CChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH---HHHHHHHHhccCCceEEEEccc
Q 016363 235 INPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS---VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 235 ~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
..+--.+.+++ -+.+..+.... .........+.+|+|+-..=... ...++.+.++++ |++++.|..
T Consensus 193 iDp~AV~aa~eNa~~N~v~~~~~~~~------~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 193 IDPQAVEAARENARLNGVELLVQAKG------FLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred CCHHHHHHHHHHHHHcCCchhhhccc------ccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 98876666654 22221110000 00111122248999996553322 245677899998 999988854
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.076 Score=55.74 Aligned_cols=115 Identities=20% Similarity=0.232 Sum_probs=67.2
Q ss_pred cceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC
Q 016363 157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 157 ~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
..+|+-+++...|.+ +-.+++++=.-.++ ....-.+.++||+|+ |++|.+.++.+...|+ +|+++++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r 446 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL 446 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence 455666666666665 44444444221100 011124789999998 9999999998888999 9999999
Q ss_pred ChhhHHHHHh-----cCCc--EEEcCCCCCCcCHHHHHHhhcC--CCccEEEEcccC
Q 016363 236 NPEKFEIGKK-----FGIT--DFINPATCGDKTVSQVIKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 236 ~~~~~~~~~~-----~g~~--~v~~~~~~~~~~~~~~i~~~~~--~g~D~vid~~g~ 283 (390)
+.++.+.+.+ .+.. ..+..+-.+..++.+.+.+... +++|++|++.|.
T Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 447 NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 8876654421 2321 1221111111233333333322 379999999884
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.11 Score=48.66 Aligned_cols=75 Identities=17% Similarity=0.241 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH---HHHhcC-Cc---EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE---IGKKFG-IT---DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~---~~~~~g-~~---~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
.+.+|+|+|| |-+|...+..+...|+ +|.+++|++++.+ .++++. +. .++..+=.++..|.+++. |
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-----C
Confidence 5689999999 9999999999999999 9999999998743 466654 22 222222111234544443 7
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
.|.||.+..
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 999997655
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.24 Score=44.32 Aligned_cols=102 Identities=22% Similarity=0.346 Sum_probs=68.2
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHhc----CCc-EEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF----GIT-DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~i~ 267 (390)
+.+...+.++++||-+|+|. |..+..++...+ ..++++++.+++..+.+++. +.. .++..+. ..+
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 34667889999999999975 888888888773 23899999999888877654 111 1121111 111
Q ss_pred hhcCCCccEEEEcc-----cC-hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECI-----GL-TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+..+.+|+|+... .. ...+..+.+.|+++ |.++...
T Consensus 82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 12234799987532 22 22467889999999 9988765
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.14 Score=46.15 Aligned_cols=78 Identities=12% Similarity=0.115 Sum_probs=49.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----c-CCc-EEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F-GIT-DFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~-g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ . +.. .++..+-.+..++.+.+.+. ...+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL-PALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH-hhcCCE
Confidence 47999998 9999999998888999 99999999877654321 1 111 22222111122333333332 125799
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++.+.|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9988774
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.092 Score=42.94 Aligned_cols=98 Identities=21% Similarity=0.170 Sum_probs=57.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-------------------hhHH----HHHhcCCc-EEEcCCCCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFE----IGKKFGIT-DFINPATCG 258 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~----~~~~~g~~-~v~~~~~~~ 258 (390)
..+|+|+|+|++|...+..+...|..+++.++... .|.+ .++++.+. .+.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 46899999999999999999999998898888432 1222 22233222 2221111
Q ss_pred CcCH-HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 259 DKTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 259 ~~~~-~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+ .+.+.++. +++|+||+|+........+.+.++..+-.++..+
T Consensus 80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 12 12222222 2789999999987744455555555513344444
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.098 Score=48.28 Aligned_cols=81 Identities=14% Similarity=0.010 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
+..++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ...+... ++..+-.+..++.+.+.+.. -++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3458999998 9999999998888899 899998887665433 2234332 22222211222333333321 137
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999998875
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.092 Score=51.31 Aligned_cols=106 Identities=15% Similarity=0.203 Sum_probs=62.7
Q ss_pred hCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH-------HHHhc-CCcEE-EcCCCCCCcCHHHHHH
Q 016363 198 AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-------IGKKF-GITDF-INPATCGDKTVSQVIK 267 (390)
Q Consensus 198 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-------~~~~~-g~~~v-~~~~~~~~~~~~~~i~ 267 (390)
..-..+.+|||+|+ |.+|..+++.+...|. +|++++++..+.+ ..... +...+ .|..+ ..++.+.+.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~ 131 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLF 131 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHH
Confidence 44566789999998 9999999998888899 9999998875432 11112 22222 12222 122333333
Q ss_pred hhcCCCccEEEEcccChH------------HHHHHHHHhccCC-ceEEEEccc
Q 016363 268 EMTDGGADYCFECIGLTS------------VMNDAFNSSREGW-GKTVILGVE 307 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~~~------------~~~~~~~~l~~~~-G~~v~~g~~ 307 (390)
+. +.++|+||+|.+... ....+++.+...+ ++++.++..
T Consensus 132 ~~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 132 SE-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred Hh-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 22 116999999886421 1223444444431 467777643
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.22 Score=47.56 Aligned_cols=37 Identities=30% Similarity=0.412 Sum_probs=33.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++..
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 99999987654
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.17 Score=45.42 Aligned_cols=80 Identities=23% Similarity=0.258 Sum_probs=59.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh--cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK--FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~--~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.++|+|+|.+|...++.+...|. .|+++++++++.+.... ++...+. .+. .-.+.++++--..+|+++-++|
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~-gd~----t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVI-GDA----TDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEE-ecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence 58899999999999999999999 99999999999777433 5544333 222 3345566653348999999999
Q ss_pred ChHHHHHHH
Q 016363 283 LTSVMNDAF 291 (390)
Q Consensus 283 ~~~~~~~~~ 291 (390)
... .+..+
T Consensus 76 ~d~-~N~i~ 83 (225)
T COG0569 76 NDE-VNSVL 83 (225)
T ss_pred CCH-HHHHH
Confidence 866 44333
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.23 Score=44.65 Aligned_cols=99 Identities=17% Similarity=0.102 Sum_probs=58.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-------------------hhHH----HHHhcCCcEEEcCCCCCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFE----IGKKFGITDFINPATCGD 259 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~----~~~~~g~~~v~~~~~~~~ 259 (390)
..+|+|+|+|++|..++..+...|..+++.++... .|.+ .++++.++.-+...+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~--- 97 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN--- 97 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec---
Confidence 57899999999999999999999998888886432 1222 223344332222211
Q ss_pred cCH-HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 260 KTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 260 ~~~-~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+ .+.+.++. .++|+||+|+.+......+.+.....+-.++..|
T Consensus 98 ~~i~~~~~~~~~-~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g 143 (228)
T cd00757 98 ERLDAENAEELI-AGYDLVLDCTDNFATRYLINDACVKLGKPLVSGA 143 (228)
T ss_pred ceeCHHHHHHHH-hCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 112 12222222 2699999999987744334444444413344444
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.075 Score=48.44 Aligned_cols=74 Identities=16% Similarity=0.255 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
+|.++||+|+ |++|...++.+...|+ +|+++++++.+. .+.. ..+ |-.+ ..++.+.+.++.. +++|
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 79 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTT--AEGCAAVARAVLERLGGVD 79 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCC--HHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999998888999 899999876542 1111 112 2222 1222222222222 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|++.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK06523 80 ILVHVLGG 87 (260)
T ss_pred EEEECCcc
Confidence 99998873
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.28 Score=44.40 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHH-Hhc---CCc-EEEcCCCCCCcCHHHHHHhhc----
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG-KKF---GIT-DFINPATCGDKTVSQVIKEMT---- 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~-~~~---g~~-~v~~~~~~~~~~~~~~i~~~~---- 270 (390)
.+.+++|+|+ |.+|...++.+...|+ +|+++ .++.++.+.+ ..+ +.. .++..+-.+..++.+.+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 3578999998 9999999998888898 77664 6666554322 222 222 122211111223333333321
Q ss_pred ---C-CCccEEEEcccC
Q 016363 271 ---D-GGADYCFECIGL 283 (390)
Q Consensus 271 ---~-~g~D~vid~~g~ 283 (390)
+ +++|++|.+.|.
T Consensus 84 ~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 84 IRVGTSEIDILVNNAGI 100 (254)
T ss_pred cccCCCCccEEEECCCC
Confidence 1 269999998875
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.085 Score=53.55 Aligned_cols=79 Identities=15% Similarity=0.257 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE---EEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD---FINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~---v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++... .+|-.+ ..++.+.+.+... +++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5789999998 9999999999999999 999999988876554 4455432 123222 2233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998874
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.09 Score=50.43 Aligned_cols=77 Identities=12% Similarity=0.078 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcC--Cc-EEEcCCCCCCcCHHHHHHhhcCC-Ccc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFG--IT-DFINPATCGDKTVSQVIKEMTDG-GAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g--~~-~v~~~~~~~~~~~~~~i~~~~~~-g~D 275 (390)
+|.+|||+|+ |.+|..+++.+...|. +|+++++++...... ..++ .. ..+..+- .+ .+.+.++..+ ++|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~-~~~~~~~~~~~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDI---RD-AAKLRKAIAEFKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccC---CC-HHHHHHHHhhcCCC
Confidence 4689999998 9999999999999998 899998876543322 2222 11 1121111 11 2234444444 789
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+||.+.+.
T Consensus 78 ~vih~A~~ 85 (349)
T TIGR02622 78 IVFHLAAQ 85 (349)
T ss_pred EEEECCcc
Confidence 99998873
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.39 Score=41.46 Aligned_cols=38 Identities=26% Similarity=0.330 Sum_probs=31.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
+|.|+|+|.+|...+.++...|. +|+..+.+++.++..
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhh
Confidence 58899999999999988888899 999999999876654
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.17 Score=46.08 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|..++..+...|..+++.++..
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888744
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.13 Score=47.81 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=50.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh---------hhHHHH----HhcCCcE-EEcCCCCCCcCHHHH
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP---------EKFEIG----KKFGITD-FINPATCGDKTVSQV 265 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~---------~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~ 265 (390)
-++.++||+|+ +++|.+.++.+...|+ +|++++++. ++.+.+ +..+... .+..+-.+..++.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 46789999998 9999999998888999 888887654 333222 2233332 221111111223333
Q ss_pred HHhhcC--CCccEEEEcccC
Q 016363 266 IKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 266 i~~~~~--~g~D~vid~~g~ 283 (390)
+.+... +++|++|++.|.
T Consensus 83 ~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHhcCCCCEEEECCCC
Confidence 333322 379999998874
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.12 Score=47.34 Aligned_cols=81 Identities=23% Similarity=0.300 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ +++|...+..+...|+ +|+.+++++++.+.+. ..+.+. .+..+-.+...+.+.+.+... ++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5678999998 9999998888888899 8999998887654432 234332 222211111223333333222 36
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 9999998885
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.58 Score=43.63 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=33.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHH
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~ 242 (390)
.+|.|+|+|.+|...++.+...|. .|+..+++++..+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 379999999999998888888899 99999999998766
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.16 Score=48.52 Aligned_cols=35 Identities=34% Similarity=0.300 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|..+++.+...|..++..++..
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34789999999999999999999999899999975
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.12 Score=47.65 Aligned_cols=79 Identities=23% Similarity=0.277 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-------HH----HHHhcCCcE-E--EcCCCCCCcCHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FE----IGKKFGITD-F--INPATCGDKTVSQVI 266 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-------~~----~~~~~g~~~-v--~~~~~~~~~~~~~~i 266 (390)
.+.++||+|+ |++|...++.+...|+ +|++++++.++ ++ .++..+.+. . .|..+ ...+.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~ 81 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV 81 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence 4678999998 9999999998888999 99999987542 11 122334332 2 23222 22233333
Q ss_pred HhhcC--CCccEEEEcccC
Q 016363 267 KEMTD--GGADYCFECIGL 283 (390)
Q Consensus 267 ~~~~~--~g~D~vid~~g~ 283 (390)
.+... +.+|++|.+.|.
T Consensus 82 ~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 82 AKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 33221 379999998884
|
|
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=1 Score=40.25 Aligned_cols=93 Identities=13% Similarity=0.029 Sum_probs=58.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
++.+|||+|+|.++.-=+..+...|+ +|.+++..-. .+..+...|.-..+ ..+ +... ++ .++++||-+
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~-----~~~~--dl--~g~~LViaA 92 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGN-----YDKE--FI--KDKHLIVIA 92 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCC-----CChH--Hh--CCCcEEEEC
Confidence 46789999999999998888888999 8888875532 23333223322222 122 2111 11 379999999
Q ss_pred ccChHHHHHHH-HHhccCCceEEEEccc
Q 016363 281 IGLTSVMNDAF-NSSREGWGKTVILGVE 307 (390)
Q Consensus 281 ~g~~~~~~~~~-~~l~~~~G~~v~~g~~ 307 (390)
++.+. ++..+ ...+.. +.++.....
T Consensus 93 TdD~~-vN~~I~~~a~~~-~~lvn~vd~ 118 (223)
T PRK05562 93 TDDEK-LNNKIRKHCDRL-YKLYIDCSD 118 (223)
T ss_pred CCCHH-HHHHHHHHHHHc-CCeEEEcCC
Confidence 99888 65544 444455 666666533
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.13 Score=46.94 Aligned_cols=80 Identities=13% Similarity=0.041 Sum_probs=48.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHH----HHhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEI----GKKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~----~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+.++||+|+ |++|..+++.+...|+ +|+.+.+ +.++.+. ++..+.. +.+..+-.+..++.+.+.+... ++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568999998 9999999999999999 8877754 4444332 2334533 2222111011223233333222 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 81 id~li~~ag~ 90 (256)
T PRK12743 81 IDVLVNNAGA 90 (256)
T ss_pred CCEEEECCCC
Confidence 9999998874
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.12 Score=46.67 Aligned_cols=81 Identities=12% Similarity=0.134 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-ecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~-~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ |.+|...+..+...|+ +|+. ..++.++.+.+ +..+... .+..+-.+..++.+.+.+... +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4679999998 9999999999999999 7665 46666554332 2334332 222221112233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.14 Score=46.13 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.+.+|+|+|+|++|..++..+...|..+++.++..
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35789999999999999999999999889888743
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.14 Score=49.66 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=31.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.+.+|+|+|+|++|..++..+...|..+++.++..
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999899999976
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.17 Score=52.01 Aligned_cols=76 Identities=13% Similarity=0.170 Sum_probs=59.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
++++|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+.... .-.+.+++..-+.+|.++-++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~-----~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNA-----ANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCC-----CCHHHHHhcCccccCEEEEEcCC
Confidence 689999999999999999999998 899999999999999988876555322 22344544433389988877776
Q ss_pred hH
Q 016363 284 TS 285 (390)
Q Consensus 284 ~~ 285 (390)
+.
T Consensus 492 ~~ 493 (558)
T PRK10669 492 GY 493 (558)
T ss_pred hH
Confidence 54
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.12 Score=47.46 Aligned_cols=78 Identities=19% Similarity=0.205 Sum_probs=49.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+|||+|+ |++|...++.+...|+ +|+.++++.++.+.+ +..+.+. .+..+-.+..++.+.+..... +++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899998 9999999988888899 899999988775543 2233332 221111011222232322221 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999884
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.082 Score=48.68 Aligned_cols=80 Identities=20% Similarity=0.203 Sum_probs=52.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH----HHHHhcC-C-cEEEcCCCCCCcCHHHHHHhhcCC-
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF----EIGKKFG-I-TDFINPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~----~~~~~~g-~-~~v~~~~~~~~~~~~~~i~~~~~~- 272 (390)
-+|+.|||+|+ +++|.+.++=...+|+ +++..+.+++.. +.+++.| + ....|-.+ .+++.+...+...+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhc
Confidence 36999999988 8999998877777888 888888776543 3444445 1 13344433 23343333333333
Q ss_pred -CccEEEEcccC
Q 016363 273 -GADYCFECIGL 283 (390)
Q Consensus 273 -g~D~vid~~g~ 283 (390)
.+|++++.+|-
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 79999999885
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.11 Score=48.80 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=31.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.+.++||+|+ +++|.++++.+...|+ +|+.++++.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~ 42 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRST 42 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeccc
Confidence 4789999998 8999999999999999 899998873
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.18 Score=47.06 Aligned_cols=134 Identities=21% Similarity=0.256 Sum_probs=70.2
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHh-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~-~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
.|.+|-.-+.+.++.+.+++.|-.. ..-.|.+. +.... -.++|++||=+|+| .|.+++. |..+|+++|++++
T Consensus 119 ~w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lc-l~~l~~~~~~g~~vLDvG~G-SGILaia-A~klGA~~v~a~D 191 (295)
T PF06325_consen 119 SWEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLC-LELLEKYVKPGKRVLDVGCG-SGILAIA-AAKLGAKKVVAID 191 (295)
T ss_dssp TT----SSTTSEEEEESTTSSS-SS----HCHHHHHH-HHHHHHHSSTTSEEEEES-T-TSHHHHH-HHHTTBSEEEEEE
T ss_pred CCcccCCCCCcEEEEECCCCcccCC----CCHHHHHH-HHHHHHhccCCCEEEEeCCc-HHHHHHH-HHHcCCCeEEEec
Confidence 3555522244566777666544332 22333332 22222 26788999998873 1333332 2335888999999
Q ss_pred CChhhHHHHHh------cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHH---HHHHHHHhccCCceEEEEc
Q 016363 235 INPEKFEIGKK------FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV---MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 235 ~~~~~~~~~~~------~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g 305 (390)
..+.-.+.+++ +.....+.... +. ..++||+|+-..-.... ...+.+.++++ |.++..|
T Consensus 192 iDp~Av~~a~~N~~~N~~~~~~~v~~~~----~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSG 259 (295)
T PF06325_consen 192 IDPLAVEAARENAELNGVEDRIEVSLSE----DL-------VEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSG 259 (295)
T ss_dssp SSCHHHHHHHHHHHHTT-TTCEEESCTS----CT-------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeeEEEEEec----cc-------ccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEcc
Confidence 99887666643 22222122111 11 12489999965554441 23455678888 9999888
Q ss_pred ccC
Q 016363 306 VEM 308 (390)
Q Consensus 306 ~~~ 308 (390)
...
T Consensus 260 Il~ 262 (295)
T PF06325_consen 260 ILE 262 (295)
T ss_dssp EEG
T ss_pred ccH
Confidence 653
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.13 Score=41.61 Aligned_cols=96 Identities=16% Similarity=0.272 Sum_probs=58.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEecCChh--h-HHHHHhcCCcEEEcCCCCCCcCHH----------------
Q 016363 206 VAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPE--K-FEIGKKFGITDFINPATCGDKTVS---------------- 263 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g--~~~Vi~~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~~~---------------- 263 (390)
|.|+|+ |.+|..++++.+... + +|++++-... + .+++++|.+..++-.++.....+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578899 999999999999886 6 7777774432 2 345567888877655430000111
Q ss_pred HHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 264 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 264 ~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+.+.++... .+|+|+.++-+-..+.-.+..++.+ +-+.+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g--k~iaL 119 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG--KDIAL 119 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT--SEEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC--CeEEE
Confidence 112233333 7888888777777788888888754 44444
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.075 Score=49.12 Aligned_cols=80 Identities=20% Similarity=0.177 Sum_probs=53.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---E---EEcCCCCCCcCH---HHHH
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---D---FINPATCGDKTV---SQVI 266 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~---v~~~~~~~~~~~---~~~i 266 (390)
-.|.++||+|+ .++|.+.+..+...|+ +|+.+++++++.+.... .+.. . ..|... +.+. .+..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~ 82 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA 82 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence 46789999998 9999999999999999 99999999988655432 2221 1 112221 1222 2222
Q ss_pred HhhcCCCccEEEEcccC
Q 016363 267 KEMTDGGADYCFECIGL 283 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~ 283 (390)
.+...|+.|+.+++.|.
T Consensus 83 ~~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGA 99 (270)
T ss_pred HHHhCCCCCEEEEcCCc
Confidence 22234589999998875
|
|
| >COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.21 Score=48.17 Aligned_cols=60 Identities=27% Similarity=0.176 Sum_probs=44.5
Q ss_pred CcchhhccccchhhHHHHHHHHhCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
...+|....+.+.+- . +.+..+. -.|.+|.|.|-|.+|+.+++.+..+|+ +|++++.+..
T Consensus 181 ~r~~aTg~Gv~~~~~-~-a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 181 GRSEATGYGVFYAIR-E-ALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCCcccceehHHHHH-H-HHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 344555555433333 2 2344555 489999999999999999999999999 9999987776
|
|
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.18 Score=46.45 Aligned_cols=131 Identities=20% Similarity=0.161 Sum_probs=85.2
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC--------CcCHHHHHHhh
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG--------DKTVSQVIKEM 269 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~--------~~~~~~~i~~~ 269 (390)
++--++..+++.|+|..|+.++-.++..|+ -|...+-.+.+.+..+.+|+.-.-..++.. +.+|...-.++
T Consensus 159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 344577889999999999999999999999 899988888888888877764322111100 11232222222
Q ss_pred cCC---CccEEEEccc--ChH----HHHHHHHHhccCCceEEEEcccCCCC-CcccchHhhhc-ceeEEeee
Q 016363 270 TDG---GADYCFECIG--LTS----VMNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEILK-GRSVCGTY 330 (390)
Q Consensus 270 ~~~---g~D~vid~~g--~~~----~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~i~g~~ 330 (390)
..+ ++|+||-+.- +.. ....+...|+++ ..++++....+.. ..+.+-..... +++|.|..
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 222 8999997543 211 346788999998 9999998654432 22222222333 78888864
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.16 Score=45.71 Aligned_cols=79 Identities=9% Similarity=0.030 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHHHH----HhcCC-c-EEE--cCCCCCCcCHHHHHHhhc-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIG----KKFGI-T-DFI--NPATCGDKTVSQVIKEMT- 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~----~~~g~-~-~v~--~~~~~~~~~~~~~i~~~~- 270 (390)
.+.++||+|+ |.+|..+++.+...|+ +|++++++. ++.+.+ ..... . ..+ |-.+ ...+.+.+.+..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 81 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD--PDALPELVAACVA 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 4578999998 9999999988888899 999999763 333322 22211 1 122 2222 122333333221
Q ss_pred -CCCccEEEEcccC
Q 016363 271 -DGGADYCFECIGL 283 (390)
Q Consensus 271 -~~g~D~vid~~g~ 283 (390)
-+++|+||.+.|.
T Consensus 82 ~~~~~d~vi~~ag~ 95 (249)
T PRK09135 82 AFGRLDALVNNASS 95 (249)
T ss_pred HcCCCCEEEECCCC
Confidence 1368999999883
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.19 Score=48.23 Aligned_cols=95 Identities=22% Similarity=0.329 Sum_probs=57.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC-----CcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.|.+|+|+|.|.+|..+++.++.+|+ +|++.+++..+... ..++ .....+... ...++.+.+. ..|+
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~L~ell~-----~aDi 229 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-GHEDIYEFAG-----EADI 229 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccC-cccCHHHHHh-----hCCE
Confidence 57899999999999999999999999 99999986432111 1110 000010000 0123443333 3678
Q ss_pred EEEcccChHH-----HHHHHHHhccCCceEEEEc
Q 016363 277 CFECIGLTSV-----MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 277 vid~~g~~~~-----~~~~~~~l~~~~G~~v~~g 305 (390)
|+.+++.... -...+..|+++ ..+|.+|
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINva 262 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIA 262 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECC
Confidence 8777663321 13566777776 6777665
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.21 Score=44.35 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|...++.+...|..+++.++..
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999889998866
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.14 Score=41.35 Aligned_cols=86 Identities=20% Similarity=0.285 Sum_probs=53.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEec-CChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
-+|-|+|+|-+|......+...|. .|..+. +++++.+++.. ++...+.+..+ .. ..+|++|-++
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~-~~aDlv~iav 76 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL-RDADLVFIAV 76 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG-CC-SEEEE-S
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc-ccCCEEEEEe
Confidence 478999999999999999999998 787775 55556666654 34433333221 11 2689999999
Q ss_pred cChHHHHHHHHHhccC----CceEEEE
Q 016363 282 GLTSVMNDAFNSSREG----WGKTVIL 304 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~----~G~~v~~ 304 (390)
.... +......|... .|+++..
T Consensus 77 pDda-I~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 77 PDDA-IAEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp -CCH-HHHHHHHHHCC--S-TT-EEEE
T ss_pred chHH-HHHHHHHHHHhccCCCCcEEEE
Confidence 9987 77777777653 2666544
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.14 Score=46.87 Aligned_cols=81 Identities=16% Similarity=0.293 Sum_probs=49.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCC---hhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDIN---PEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~---~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.+.+. +++.+.+ ++++....+..+-.+..++.+.+.+... +
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4789999984 5899999998888999 88887543 3333333 3344322222111112334444444332 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 79999998864
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.74 E-value=1.3 Score=42.01 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=34.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
.+|.|+|+|.+|...++.+...|. .|+..+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 579999999999999998888999 999999998765543
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.63 Score=42.79 Aligned_cols=94 Identities=16% Similarity=0.220 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CC----c--EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI----T--DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~----~--~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
.++.+||++|+|. |..+..+++.....+|++++.+++-.+.+++. +. + .++. .|..+.+.+. ++.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence 4567899999863 77777777776544999999999998888763 31 1 2222 2444445432 347
Q ss_pred ccEEE-EcccC---------hHHHHHHHHHhccCCceEEE
Q 016363 274 ADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 274 ~D~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~ 303 (390)
+|+|+ |.... ...++.+.+.|+++ |.++.
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 99997 54322 23467888999998 99876
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.19 Score=47.48 Aligned_cols=39 Identities=13% Similarity=0.061 Sum_probs=33.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE 241 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~ 241 (390)
.|.+|||+|+ |.+|...+..+...|. +|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence 4689999998 9999999998888899 8998888776543
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.092 Score=46.18 Aligned_cols=35 Identities=40% Similarity=0.459 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34679999999999999999999999889999877
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.18 Score=45.27 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HH----HHHhcCCcE-EE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FE----IGKKFGITD-FI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~----~~~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.+.++||+|+ |.+|...+..+...|+ +|+++.+++.+ .+ .++..+... .+ |-.+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4568999998 9999999999998999 78777766543 22 122223322 22 2222 1223333333322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|.+|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 268999998874
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.16 Score=45.61 Aligned_cols=80 Identities=23% Similarity=0.336 Sum_probs=49.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHHHh----cCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGKK----FGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+.++||+|+ |.+|...+..+...|+ +|+.+ ++++++.+.+.. .+... ++..+-.+..++.+.+.+... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999998 9999999988888899 88888 888776544322 22222 221111011223232322222 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998874
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.35 Score=46.63 Aligned_cols=98 Identities=20% Similarity=0.286 Sum_probs=63.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEec--CChhhH-HHHHhcCCcEEEcCCCCCCcCH--------------H
Q 016363 204 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVD--INPEKF-EIGKKFGITDFINPATCGDKTV--------------S 263 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~--g~~~Vi~~~--~~~~~~-~~~~~~g~~~v~~~~~~~~~~~--------------~ 263 (390)
.+|.|+|+ |++|..++++.+.. .+ +|++++ ++.++. ++++++++..++-.++.....+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 47899997 99999999988755 46 777775 444443 4556788887665443000011 1
Q ss_pred HHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 264 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 264 ~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+.+.++... .+|+|+.++++...+...+..++.+ +-+.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG--K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG--KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC--CcEEE
Confidence 122233333 6999999998876688888888764 44444
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.2 Score=49.14 Aligned_cols=76 Identities=20% Similarity=0.281 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc-EEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.+++++|+|+ |++|.+.++.+...|+ +|+++++++++.+... ..+.. ..+..+- .+ .+.+.+.. +++|++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv---sd-~~~v~~~l-~~IDiLI 250 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV---GQ-EAALAELL-EKVDILI 250 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC---CC-HHHHHHHh-CCCCEEE
Confidence 4789999998 9999999998888999 9999998876654322 11111 1222111 11 22333332 3799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
.+.|.
T Consensus 251 nnAGi 255 (406)
T PRK07424 251 INHGI 255 (406)
T ss_pred ECCCc
Confidence 88774
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.4 Score=43.22 Aligned_cols=106 Identities=17% Similarity=0.338 Sum_probs=72.4
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
...+.++|++||=+++| +|-.+..+++..|-.+|+++|.|++-++.+++ .+... +.+-. .+. +.+ -+.+
T Consensus 45 ~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~dA-e~L-Pf~D 117 (238)
T COG2226 45 SLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---GDA-ENL-PFPD 117 (238)
T ss_pred HhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---ech-hhC-CCCC
Confidence 45566789999988664 68889999998886699999999998877754 23221 11111 111 111 1223
Q ss_pred CCccEEEEcccC------hHHHHHHHHHhccCCceEEEEcccCC
Q 016363 272 GGADYCFECIGL------TSVMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 272 ~g~D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
..+|+|.-+.|- +.++..+.+.|+|+ |+++.+....+
T Consensus 118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 389999776664 33688999999999 99988876554
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.3 Score=47.44 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=61.0
Q ss_pred CCEEEEE----cC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-----------HhcCCcEEEcCCCCCCcCHHHHH
Q 016363 203 GSTVAIF----GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----------KKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 203 g~~VlI~----Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-----------~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
..+|||+ |+ |.+|...+..+...|. +|+++++++.+...+ ...+...+.. |+.+ +
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~-------D~~d-~ 122 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWG-------DPAD-V 122 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEEe-------cHHH-H
Confidence 3679999 98 9999999998888898 999999887643221 2223333321 2322 3
Q ss_pred HhhcCC-CccEEEEcccChH-HHHHHHHHhccCC-ceEEEEcc
Q 016363 267 KEMTDG-GADYCFECIGLTS-VMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 267 ~~~~~~-g~D~vid~~g~~~-~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
.+.... ++|+||++.+... ....+++.++..+ .++|.++.
T Consensus 123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 333333 8999999987543 2345566665441 36777664
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.3 Score=45.39 Aligned_cols=81 Identities=16% Similarity=0.194 Sum_probs=58.0
Q ss_pred HHhC-CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 196 KVAG-VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 196 ~~~~-~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
+..+ --.|.+|+|+|.|. +|...+.++...|+ +|++..+.. .++.+.+ ..
T Consensus 151 ~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~-----~~ 202 (283)
T PRK14192 151 KAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV-----KQ 202 (283)
T ss_pred HHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh-----cc
Confidence 3334 35789999999976 99999999999999 888776421 1222222 26
Q ss_pred ccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 274 ~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+|+|+.++|.+..+ -.+.++++ ..++.+|..
T Consensus 203 aDIvI~AtG~~~~v--~~~~lk~g-avViDvg~n 233 (283)
T PRK14192 203 ADIIVGAVGKPELI--KKDWIKQG-AVVVDAGFH 233 (283)
T ss_pred CCEEEEccCCCCcC--CHHHcCCC-CEEEEEEEe
Confidence 89999999866622 23568887 888888854
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.096 Score=47.95 Aligned_cols=76 Identities=18% Similarity=0.264 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. ..... ..|..+ ..++.+.+.+... +++|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 9999999999999999 99999887655321 11111 122222 2233333333322 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 998873
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.21 Score=45.60 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH-Hh----cCCc-EEEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KK----FGIT-DFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~-~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
+++++||+|+ +++|.+.+..+...|+ +|+.+.+ ++++.+.+ ++ .+.. ..+..+-.+..++.+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 5789999998 9999999999889999 8887754 44444322 11 2322 2222111112233333333322
Q ss_pred CCccEEEEccc
Q 016363 272 GGADYCFECIG 282 (390)
Q Consensus 272 ~g~D~vid~~g 282 (390)
+++|+++.+.|
T Consensus 86 g~id~lv~nAg 96 (260)
T PRK08416 86 DRVDFFISNAI 96 (260)
T ss_pred CCccEEEECcc
Confidence 37999999875
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.082 Score=43.99 Aligned_cols=86 Identities=20% Similarity=0.208 Sum_probs=51.5
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCC--CC-CcCHHHHHHhhcCCCccEEEEccc
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT--CG-DKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~--~~-~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
|+|+|+|++|...+..++..|. +|..+++++ +.+.+++.|........+ .. ....... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888888999 999999888 777776644321111100 00 0000000 111238999999987
Q ss_pred ChHHHHHHHHHhcc
Q 016363 283 LTSVMNDAFNSSRE 296 (390)
Q Consensus 283 ~~~~~~~~~~~l~~ 296 (390)
... ...+++.+++
T Consensus 77 a~~-~~~~l~~l~~ 89 (151)
T PF02558_consen 77 AYQ-LEQALQSLKP 89 (151)
T ss_dssp GGG-HHHHHHHHCT
T ss_pred ccc-hHHHHHHHhh
Confidence 655 4444444443
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.33 Score=45.33 Aligned_cols=70 Identities=21% Similarity=0.226 Sum_probs=50.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.|+...
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 37889999999988888888898 99999999999888877665321 12222222 478888888765
Q ss_pred HHHH
Q 016363 285 SVMN 288 (390)
Q Consensus 285 ~~~~ 288 (390)
....
T Consensus 67 ~~~~ 70 (291)
T TIGR01505 67 PQVE 70 (291)
T ss_pred HHHH
Confidence 4343
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.16 Score=45.77 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhh-HHHH---HhcCCcEEE---cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEK-FEIG---KKFGITDFI---NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~-~~~~---~~~g~~~v~---~~~~~~~~~~~~~i~~~~~- 271 (390)
++.++||+|+ |++|...++.+...|+ +|++.. +++.+ .+.+ +..+..... |..+ ..++.+.+.+...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAE 78 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3678999998 9999999999999999 777754 33332 2222 334443322 2222 1223333333221
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 79 ~~~id~li~~ag~ 91 (246)
T PRK12938 79 VGEIDVLVNNAGI 91 (246)
T ss_pred hCCCCEEEECCCC
Confidence 379999999885
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.39 Score=45.67 Aligned_cols=94 Identities=17% Similarity=0.082 Sum_probs=63.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cC----C-CCCCcCHHHHHHhhcCCCccEE
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NP----A-TCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~----~-~~~~~~~~~~i~~~~~~g~D~v 277 (390)
-+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+...+.+... .. . -....+..+.+ +.+|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 479999999999999998888898 899999998887777654211000 00 0 00001232222 268999
Q ss_pred EEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 278 FECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
|-++.... +...++.++++ -.++.+.
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~ 104 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCA 104 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEe
Confidence 99999887 77888888876 5565554
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.28 Score=42.98 Aligned_cols=92 Identities=13% Similarity=0.094 Sum_probs=56.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-------------------h----HHHHHhcCCcEEEcCCCCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------K----FEIGKKFGITDFINPATCG 258 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-------------------~----~~~~~~~g~~~v~~~~~~~ 258 (390)
...+|+|+|+|++|...+..+...|..++..++...- | .+.++++.++..+....
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 4578999999999999999999999988888874421 1 12234555554333222
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccC
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREG 297 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~ 297 (390)
..+.+...++. .++|+|++|..........-+..+..
T Consensus 98 -~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~ 134 (197)
T cd01492 98 -DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL 134 (197)
T ss_pred -cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc
Confidence 11111111111 26999999988766444444444444
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.48 Score=43.27 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=64.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcCC-C
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDG-G 273 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~-g 273 (390)
....++++++||=+|+| .|..+..+++.....+|++++.++.-.+.+++.... .++.. ++. .+... .
T Consensus 25 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~~~ 93 (258)
T PRK01683 25 ARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPPQA 93 (258)
T ss_pred hhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCCCC
Confidence 45567889999999885 355567777766434999999999988887664322 22221 221 12223 8
Q ss_pred ccEEEEcccC------hHHHHHHHHHhccCCceEEEEc
Q 016363 274 ADYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 274 ~D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+|+|+....- ...+..+.+.|+++ |.++...
T Consensus 94 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 94 LDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred ccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 9999854432 23477888999999 9987753
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=1.3 Score=40.21 Aligned_cols=98 Identities=10% Similarity=0.235 Sum_probs=62.2
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC-cEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
+.....++.+||-+|+|. |..+..+++ .|. +|++++.+++.++.+++... ..++.. ++.+ + .+.++.+
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~------d~~~-~-~~~~~~f 104 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG------DIES-L-PLATATF 104 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc------Cccc-C-cCCCCcE
Confidence 334445678899999865 655555554 576 99999999998888876432 222211 1111 0 1122379
Q ss_pred cEEEEcccC------hHHHHHHHHHhccCCceEEEEc
Q 016363 275 DYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 275 D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
|+|+....- ...+..+.+.|+++ |.++...
T Consensus 105 D~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~ 140 (251)
T PRK10258 105 DLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTT 140 (251)
T ss_pred EEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence 999865431 22467788999998 9988654
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.2 Score=45.28 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=49.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC--CC
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+++|+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ +..+... .+ |-.+ ...+.+.+.+... ++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence 36899998 9999999998889999 899999887654333 2334322 22 2222 1223333333322 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 78 id~vi~~ag~ 87 (254)
T TIGR02415 78 FDVMVNNAGV 87 (254)
T ss_pred CCEEEECCCc
Confidence 8999998874
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.17 Score=46.23 Aligned_cols=104 Identities=15% Similarity=0.194 Sum_probs=61.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCCh------hhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP------EKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~------~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
.|.+++|+|+ +++|.+.++.+...|+ +|+.+.++. +..+.+.+.+.. ..+..+-.+..++.+.+.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4789999996 4899999998888999 888775432 223333322211 2221111112233333333322
Q ss_pred --CCccEEEEcccCh-------H----------------------HHHHHHHHhccCCceEEEEccc
Q 016363 272 --GGADYCFECIGLT-------S----------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 272 --~g~D~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+++|+++++.|.. . ..+.++..|++. |+|+.++..
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 3799999998732 1 124456677777 899888753
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.24 Score=46.56 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHH----HHHhcCCcEEEcCCCCCCc-CHHHHHHhhc-CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE----IGKKFGITDFINPATCGDK-TVSQVIKEMT-DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~----~~~~~g~~~v~~~~~~~~~-~~~~~i~~~~-~~g 273 (390)
.+.++||+|+ +++|...++.+...|+ +|+.++++. ++.+ .++..|.......-+..+. .+.+.+.+.. -++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4679999998 9999999998888899 888887643 2322 2233343322222111111 1222222111 247
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.23 Score=41.81 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=56.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC------cEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI------TDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
+|.|+|+|..|.+++.++...|. +|....++++..+.+++-+. +..+...-.-..++.+.++ +.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence 58899999999999999999998 99999999988877764221 1111000000124555542 689999
Q ss_pred EcccChHHHHHHHHHhcc
Q 016363 279 ECIGLTSVMNDAFNSSRE 296 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~ 296 (390)
-+++... +...++.+++
T Consensus 75 iavPs~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQA-HREVLEQLAP 91 (157)
T ss_dssp E-S-GGG-HHHHHHHHTT
T ss_pred ecccHHH-HHHHHHHHhh
Confidence 9999876 6767766666
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.22 Score=47.08 Aligned_cols=78 Identities=19% Similarity=0.164 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEecCChhhHHHH-HhcC---Cc-EEE--cCCCCCCcCHHHHHHhhc--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIG-KKFG---IT-DFI--NPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~-~~~g---~~-~v~--~~~~~~~~~~~~~i~~~~--~ 271 (390)
+.++||+|+ +++|.+.++.+...| + +|+.+++++++.+.+ +++. .. .++ |-.+ ..++.+.+.++. .
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 568999998 999999988888889 7 999999988776544 2332 11 122 2222 122333333332 2
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 379999998874
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.48 Score=41.93 Aligned_cols=95 Identities=16% Similarity=0.059 Sum_probs=62.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-hhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.|..|||+|+|.+|.-=+.+....|+ +|+++..+. .++..+.+-+.-..+. . .+.... + .++++||-+
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~-----~~~~~~--~--~~~~lviaA 79 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-R-----EFDAED--L--DDAFLVIAA 79 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-c-----ccChhh--h--cCceEEEEe
Confidence 56799999999999999999999999 888888766 3333332222211111 1 111111 1 158999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
++++..-+...+..++. +..+.+....
T Consensus 80 t~d~~ln~~i~~~a~~~-~i~vNv~D~p 106 (210)
T COG1648 80 TDDEELNERIAKAARER-RILVNVVDDP 106 (210)
T ss_pred CCCHHHHHHHHHHHHHh-CCceeccCCc
Confidence 99988344566666666 7888776443
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.29 Score=50.86 Aligned_cols=77 Identities=22% Similarity=0.302 Sum_probs=60.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+.. + .+-.+.+++..-+.+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-D----at~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-D----ATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-e----CCCHHHHHhcCCCcCCEEEEEeC
Confidence 3689999999999999999999999 8999999999999999888654442 2 22233444433338999999998
Q ss_pred ChH
Q 016363 283 LTS 285 (390)
Q Consensus 283 ~~~ 285 (390)
++.
T Consensus 474 d~~ 476 (621)
T PRK03562 474 DPQ 476 (621)
T ss_pred CHH
Confidence 866
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.23 Score=44.45 Aligned_cols=79 Identities=14% Similarity=0.207 Sum_probs=47.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH-Hh---cCCc-EEEcCCCCCCcCHHHHHHhhc--CCCc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KK---FGIT-DFINPATCGDKTVSQVIKEMT--DGGA 274 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~-~~---~g~~-~v~~~~~~~~~~~~~~i~~~~--~~g~ 274 (390)
.++||+|+ |++|...++.+...|+ +|+++.+ ++++.+.. .+ .+.. .++..+-.+...+.+.+.++. .+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 46899998 9999999999989999 8888887 44443322 22 2222 122111101122333333332 1369
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+||.+.|.
T Consensus 80 d~vi~~ag~ 88 (242)
T TIGR01829 80 DVLVNNAGI 88 (242)
T ss_pred cEEEECCCC
Confidence 999999874
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.17 Score=45.73 Aligned_cols=76 Identities=25% Similarity=0.240 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
++.++||+|+ |.+|...++.+...|+ +|++++++. ....+.. ..+..+-.+...+.+.+.+... +++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4688999998 9999999998888999 999999876 2222221 1221111011233333333222 369999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998875
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.22 Score=45.17 Aligned_cols=79 Identities=13% Similarity=0.179 Sum_probs=47.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHH----HHHhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~----~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.++||+|+ |.+|...+..+...|+ +|++++++.. +.+ .++..+.. .++..+-.+..++.+.+.+... +++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 57999998 9999999999888999 8999887643 222 22223322 2222111112233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (256)
T PRK12745 82 DCLVNNAGV 90 (256)
T ss_pred CEEEECCcc
Confidence 999998874
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.17 Score=51.89 Aligned_cols=79 Identities=16% Similarity=0.215 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. ..|... ++ |-.+ ...+.+.+.+...
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4678999998 9999999998888999 8999999987765442 234322 22 2222 1223333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++++++|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 379999999885
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.22 Score=47.77 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=49.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc--CCc-EEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF--GIT-DFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~--g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
..+.+|||+|+ |.+|...++.+...|. +|+++++++++.+.+. .+ +.. .++..+- .+ .+.+.++.. ++|
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~-~~~~~~~~~-~~d 81 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSLHLLSKWKEGDRLRLFRADL---QE-EGSFDEAVK-GCD 81 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhhccCCeEEEEECCC---CC-HHHHHHHHc-CCC
Confidence 46779999998 9999999999988999 8999988876654332 22 111 2222111 11 122333322 589
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+||.+.+.
T Consensus 82 ~Vih~A~~ 89 (353)
T PLN02896 82 GVFHVAAS 89 (353)
T ss_pred EEEECCcc
Confidence 99988763
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.46 Score=44.43 Aligned_cols=70 Identities=19% Similarity=0.212 Sum_probs=50.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .++.+.+. ..|+||.|+...
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~~-----~~d~vi~~vp~~ 69 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVAE-----QCDVIITMLPNS 69 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEeCCCH
Confidence 68999999999988887778888 89999999998887777664211 12322221 478888888765
Q ss_pred HHHH
Q 016363 285 SVMN 288 (390)
Q Consensus 285 ~~~~ 288 (390)
....
T Consensus 70 ~~~~ 73 (296)
T PRK11559 70 PHVK 73 (296)
T ss_pred HHHH
Confidence 5344
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.16 Score=48.55 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=30.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
++|||+|+ |.+|...++.+...|. +|++++++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-EVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-EEEEEecCCc
Confidence 47999998 9999999999999999 9999988754
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.36 Score=44.97 Aligned_cols=97 Identities=18% Similarity=0.193 Sum_probs=63.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhcC-----CcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
+.++|+-+|+|+.++.++.++..+.. .+++.++.+++..+.+++.- ...-+.... .+..+... ..+++|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~~~--~l~~FD 197 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDVTE--SLKEYD 197 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhccc--ccCCcC
Confidence 78999999999999998888875532 28999999999888886632 111111111 22222110 123899
Q ss_pred EEEEcc-------cChHHHHHHHHHhccCCceEEEE
Q 016363 276 YCFECI-------GLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 276 ~vid~~-------g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+||-.+ .-...+..+.+.|+++ |.++.=
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 998654 1122467888999998 877643
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.25 Score=46.51 Aligned_cols=104 Identities=11% Similarity=-0.008 Sum_probs=69.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHH-hcCCc--EEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
-....+++|+|+|..|.+.+..+. ..+.++|.+..+++++.+.+. ++... .+. . .++.+.+. ++|
T Consensus 122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aD 190 (304)
T PRK07340 122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVD 190 (304)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCC
Confidence 345678999999999999888876 467778999999998866553 34211 111 1 23444442 699
Q ss_pred EEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH
Q 016363 276 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 318 (390)
Q Consensus 276 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 318 (390)
+|+.|++....+-.. .++++ -.+..+|...+ ....+++.
T Consensus 191 iVitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p-~~~El~~~ 229 (304)
T PRK07340 191 LVVTATTSRTPVYPE--AARAG-RLVVAVGAFTP-DMAELAPR 229 (304)
T ss_pred EEEEccCCCCceeCc--cCCCC-CEEEecCCCCC-CcccCCHH
Confidence 999998876644333 36776 78888885543 23344444
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.52 Score=44.36 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=30.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
.|.++||+|+ .++|.++++.+...|+ +|+. .++..++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchh
Confidence 5889999998 7899999999999999 8887 4454443
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=94.26 E-value=1.1 Score=42.45 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=61.6
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHHh-c---CCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~-~---g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
..-+...+|+|+|+|..|...+..+. ..+..+|++..+++++.+.+.+ + |..... . .+..+.++
T Consensus 120 La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~-----~~~~~av~----- 188 (314)
T PRK06141 120 LARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V-----TDLEAAVR----- 188 (314)
T ss_pred hCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e-----CCHHHHHh-----
Confidence 33456789999999999999886444 4676699999999988665533 3 322111 1 13333432
Q ss_pred CccEEEEcccChHHHHHHHHHhccCCceEEEEcc
Q 016363 273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 273 g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
++|+|+.+++....+ .-.+.++++ -.+..+|.
T Consensus 189 ~aDIVi~aT~s~~pv-l~~~~l~~g-~~i~~ig~ 220 (314)
T PRK06141 189 QADIISCATLSTEPL-VRGEWLKPG-THLDLVGN 220 (314)
T ss_pred cCCEEEEeeCCCCCE-ecHHHcCCC-CEEEeeCC
Confidence 699999888865421 122567776 55556663
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.24 Score=44.48 Aligned_cols=77 Identities=12% Similarity=0.044 Sum_probs=48.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-ecCChhhHHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhc--CC
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~-~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~--~~ 272 (390)
.++||+|+ |.+|...++.+...|+ +|++ ..+++++.+.+ +..+.. .++ |..+ ...+.+.+.+.. .+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD--ENQVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC--HHHHHHHHHHHHHhCC
Confidence 47899998 9999999998888999 7766 45666554332 223332 222 2222 223344444432 23
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (247)
T PRK09730 79 PLAALVNNAGI 89 (247)
T ss_pred CCCEEEECCCC
Confidence 79999999885
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.14 Score=45.57 Aligned_cols=71 Identities=11% Similarity=0.149 Sum_probs=48.8
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CCcEE-EcCCCCCCcCHHHHHHhhcCC-CccEEEEcc
Q 016363 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDF-INPATCGDKTVSQVIKEMTDG-GADYCFECI 281 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~~~v-~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~ 281 (390)
|||+|+ |.+|...+..+...|. .|+++.+++......... ....+ .|..+ .+.+.++..+ .+|.||.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~------~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLTD------KEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETTS------HHHHHHHHHHHTESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeeccc------cccccccccccCceEEEEee
Confidence 799998 9999999999999999 888888887766554432 22211 12222 2233333333 789999998
Q ss_pred cC
Q 016363 282 GL 283 (390)
Q Consensus 282 g~ 283 (390)
+.
T Consensus 74 ~~ 75 (236)
T PF01370_consen 74 AF 75 (236)
T ss_dssp SS
T ss_pred cc
Confidence 86
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.27 Score=45.52 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=56.0
Q ss_pred CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEecCChhhHHHHH-----hcCCc---EEEcCCCCCCcC-HHHHHHhh
Q 016363 201 EVGSTVAIFGL-GAVGLA-VAEGARLNRASKIIGVDINPEKFEIGK-----KFGIT---DFINPATCGDKT-VSQVIKEM 269 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~-ai~la~~~g~~~Vi~~~~~~~~~~~~~-----~~g~~---~v~~~~~~~~~~-~~~~i~~~ 269 (390)
+-|++.+|+|+ .++|.+ |-+||+ .|. +|+.+.|+++|++.++ ..++. .++|+.. .+ .-+.+++.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~ 121 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEK 121 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHH
Confidence 35789999999 899977 556666 999 8999999999987663 24432 3456555 33 24445555
Q ss_pred cCC-CccEEEEcccCh
Q 016363 270 TDG-GADYCFECIGLT 284 (390)
Q Consensus 270 ~~~-g~D~vid~~g~~ 284 (390)
..+ .+-+.++++|..
T Consensus 122 l~~~~VgILVNNvG~~ 137 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGMS 137 (312)
T ss_pred hcCCceEEEEeccccc
Confidence 555 788888999853
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.2 Score=47.27 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=32.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
.+.+|||+|+ |.+|...+..+...|. +|++++++.++.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-~V~~~~r~~~~~ 41 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY-TVKATVRDPNDP 41 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC-EEEEEEcCCCch
Confidence 3578999998 9999999999999999 899988876543
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.26 Score=49.51 Aligned_cols=70 Identities=26% Similarity=0.291 Sum_probs=50.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-----hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-----KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+.+|+|+|+|.+|+.++.+++..|+ +|++++.++. ..+.+++.|.....+... . ...++|+
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~----~--------~~~~~D~ 81 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP----T--------LPEDTDL 81 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc----c--------ccCCCCE
Confidence 56799999999999999999999999 8999886542 224456667655443322 1 0126888
Q ss_pred EEEcccCh
Q 016363 277 CFECIGLT 284 (390)
Q Consensus 277 vid~~g~~ 284 (390)
|+-+.|-+
T Consensus 82 Vv~s~Gi~ 89 (480)
T PRK01438 82 VVTSPGWR 89 (480)
T ss_pred EEECCCcC
Confidence 88887753
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.32 Score=50.40 Aligned_cols=93 Identities=12% Similarity=0.129 Sum_probs=67.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+... .+-.+.+++..-+.+|.++-++++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GD-----at~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGD-----ATQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEee-----CCCHHHHHhcCCccCCEEEEEeCC
Confidence 689999999999999999999999 89999999999999999886554421 233344544433389999999998
Q ss_pred hHHHHHH---HHHhccCCceEEE
Q 016363 284 TSVMNDA---FNSSREGWGKTVI 303 (390)
Q Consensus 284 ~~~~~~~---~~~l~~~~G~~v~ 303 (390)
+..-... .+...+. .+++.
T Consensus 475 ~~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 475 PEDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHHCCC-CeEEE
Confidence 7633233 3344444 45553
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.75 Score=41.97 Aligned_cols=97 Identities=18% Similarity=0.145 Sum_probs=66.4
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC-
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~- 271 (390)
+.......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+.+.+. .+.. ++..
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~~----~~~~~ 87 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDVR----DWKPK 87 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cChh----hCCCC
Confidence 33556678889999999854 56667777765 55 899999999988888775543222 1221 2222
Q ss_pred CCccEEEEccc-----C-hHHHHHHHHHhccCCceEEEE
Q 016363 272 GGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 272 ~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+.+|+|+.... . ...+..+.+.|+++ |+++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 38999986443 2 23467788999999 998765
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.29 Score=43.84 Aligned_cols=78 Identities=15% Similarity=0.193 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
+..+|||+|+ |.+|...++.+...|+ +|+++.++..+ .+.+ ...+.. +++ |..+ ..++.+.+.+...
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 81 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD--KAALEAAVAAAVER 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC--HHHHHHHHHHHHHH
Confidence 3468999998 9999999999999999 77776655443 2222 223322 222 2222 1223333333221
Q ss_pred -CCccEEEEccc
Q 016363 272 -GGADYCFECIG 282 (390)
Q Consensus 272 -~g~D~vid~~g 282 (390)
+++|.||.+.|
T Consensus 82 ~~~id~vi~~ag 93 (249)
T PRK12825 82 FGRIDILVNNAG 93 (249)
T ss_pred cCCCCEEEECCc
Confidence 37999999887
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.5 Score=44.99 Aligned_cols=85 Identities=26% Similarity=0.171 Sum_probs=56.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.+++++...... ... .++.+.+. ..|+|+-++
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~~--------~~~----~~l~ell~-----~aDiVil~l 206 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDFL--------TYK----DSVKEAIK-----DADIISLHV 206 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhhh--------hcc----CCHHHHHh-----cCCEEEEeC
Confidence 57789999999999999999999999 9999998875432110 011 12333332 478888777
Q ss_pred cChHH-----HHHHHHHhccCCceEEEEc
Q 016363 282 GLTSV-----MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~-----~~~~~~~l~~~~G~~v~~g 305 (390)
+.... ....+..|+++ ..+|.++
T Consensus 207 P~t~~t~~li~~~~l~~mk~g-avlIN~a 234 (330)
T PRK12480 207 PANKESYHLFDKAMFDHVKKG-AILVNAA 234 (330)
T ss_pred CCcHHHHHHHhHHHHhcCCCC-cEEEEcC
Confidence 75431 12455667766 6666665
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.31 Score=46.91 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
...+|||+|+|++|..+++.+...|..+++.++...
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 447899999999999999999999998999888553
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.25 Score=44.71 Aligned_cols=77 Identities=14% Similarity=0.189 Sum_probs=48.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc--EEEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT--DFINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~--~v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
++||+|+ +++|.+.++.+. .|. +|+.+++++++.+.+ ++.+.+ ..+..+-.+...+.+.+.+... +++|
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 6899998 999999887665 488 999999998877644 233432 2222211112233333333322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++.+.|.
T Consensus 80 ~lv~nag~ 87 (246)
T PRK05599 80 LAVVAFGI 87 (246)
T ss_pred EEEEecCc
Confidence 99988874
|
|
| >KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.12 E-value=1.1 Score=41.97 Aligned_cols=57 Identities=23% Similarity=0.155 Sum_probs=47.3
Q ss_pred HHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC---hhhHHHHHhcCCcEEEc
Q 016363 196 KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN---PEKFEIGKKFGITDFIN 253 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~---~~~~~~~~~~g~~~v~~ 253 (390)
....+.||.++||-.. |.+|...+-++...|+ ++|++... .+|+..++.+|++.+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 3456899999999986 9999999999999999 88888754 47788889999876653
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.26 Score=46.57 Aligned_cols=38 Identities=16% Similarity=0.146 Sum_probs=32.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
.+.+|||+|+ |.+|...+..+...|+ +|+++++++++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDR 42 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcch
Confidence 4689999998 9999999999988999 898888776543
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.78 Score=43.63 Aligned_cols=95 Identities=19% Similarity=0.152 Sum_probs=63.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHH-hc----CCcEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KF----GITDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~-~~----g~~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
.+...+++|+|+|..+.+.+..+. ..+.++|.+..++++|.+.+. .+ |.+ +... .++.+.+. .
T Consensus 126 ~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av~-----~ 194 (326)
T TIGR02992 126 REDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAMS-----G 194 (326)
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHhc-----c
Confidence 345578999999999988877665 578779999999998876553 23 432 2211 23444442 6
Q ss_pred ccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 274 ~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+|+|+.|++....+ .....++++ -.+..+|..
T Consensus 195 aDiVvtaT~s~~p~-i~~~~l~~g-~~i~~vg~~ 226 (326)
T TIGR02992 195 ADIIVTTTPSETPI-LHAEWLEPG-QHVTAMGSD 226 (326)
T ss_pred CCEEEEecCCCCcE-ecHHHcCCC-cEEEeeCCC
Confidence 99999998875421 223457776 667777754
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.35 Score=41.46 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=29.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+|+|+|+|++|...++.+...|..+++.++...
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899888664
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.31 Score=43.87 Aligned_cols=81 Identities=17% Similarity=0.168 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ |.+|...+..+...|+ +|+++.+ ++++.+.+ +..+.+. .+..+-.+...+.+.+.+... +
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 9999999998888899 7776554 44443322 2333322 222222112233333333322 2
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (247)
T PRK12935 84 KVDILVNNAGI 94 (247)
T ss_pred CCCEEEECCCC
Confidence 68999998875
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.28 Score=44.68 Aligned_cols=79 Identities=23% Similarity=0.222 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHH----HHHhcCCcE-EE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE----IGKKFGITD-FI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~----~~~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
++.++||+|+ |.+|...++.+...|+ +|+.+.++. ++.+ .++..+... .+ |-.+ ...+.+.+.....
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~ 82 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV--ESDVVNLIQTAVKE 82 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC--HHHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 787777643 3322 222334322 22 2222 1222333333222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 83 ~g~id~lv~~ag~ 95 (261)
T PRK08936 83 FGTLDVMINNAGI 95 (261)
T ss_pred cCCCCEEEECCCC
Confidence 379999998884
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.39 Score=44.58 Aligned_cols=68 Identities=18% Similarity=0.272 Sum_probs=50.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|.-... . .+. +.+ ..+|+||-|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence 58899999999998888888898 899999999998888777642111 1 111 111 2588999888865
Q ss_pred H
Q 016363 285 S 285 (390)
Q Consensus 285 ~ 285 (390)
.
T Consensus 69 ~ 69 (279)
T PRK07417 69 L 69 (279)
T ss_pred H
Confidence 5
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.56 Score=43.76 Aligned_cols=95 Identities=15% Similarity=0.227 Sum_probs=67.1
Q ss_pred hccccchhhHHHHHHHHhCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC
Q 016363 181 CLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 258 (390)
..+||+....+. +.+..++ -.|.+|+|+|. +.+|.-.+.++...|+ +|++..+...
T Consensus 137 ~~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------- 194 (301)
T PRK14194 137 VLTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------- 194 (301)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC--------------------
Confidence 346665554444 3355554 46999999998 6999999999999999 8888754321
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+..+..+ .+|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 --DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred --CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 2222332 4899999999887555443 8887 888888854
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.2 Score=51.00 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=50.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.+.++||+|+|++|.+++..+...|+ +|+++.++.++.+.+. .++. ..+...+ + .+......|+++++
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~-~~~~~~~-----~----~~~~~~~~diiINt 446 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGG-QALTLAD-----L----ENFHPEEGMILANT 446 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCC-ceeeHhH-----h----hhhccccCeEEEec
Confidence 46789999999999999999999999 9999999988776664 3442 2222211 1 11111257899988
Q ss_pred ccCh
Q 016363 281 IGLT 284 (390)
Q Consensus 281 ~g~~ 284 (390)
++-.
T Consensus 447 T~vG 450 (529)
T PLN02520 447 TSVG 450 (529)
T ss_pred ccCC
Confidence 7643
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.52 Score=39.42 Aligned_cols=96 Identities=19% Similarity=0.255 Sum_probs=62.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCC---CCcCHHHHHHhhcCC-CccEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC---GDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~i~~~~~~-g~D~vi 278 (390)
.+|+|.|+ |++|.++++.-+..++ -|.-++-++... -....+++.++. .+....+++.+...+ ++|.||
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 46889998 9999999999999999 888877554332 122344443220 012234444555566 999999
Q ss_pred EcccChH--------------------------HHHHHHHHhccCCceEEEEcc
Q 016363 279 ECIGLTS--------------------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 279 d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+-.|+-. ....+...|+++ |.+-+.|.
T Consensus 78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGA 130 (236)
T KOG4022|consen 78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGA 130 (236)
T ss_pred EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeeccc
Confidence 8777521 123445678888 88877764
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.28 Score=47.33 Aligned_cols=82 Identities=22% Similarity=0.268 Sum_probs=48.8
Q ss_pred CCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEecCCh--hh--------------HHHHHhcCCc-EEEcCCCCCCc
Q 016363 201 EVGSTVAIFGL-GAVGLA--VAEGARLNRASKIIGVDINP--EK--------------FEIGKKFGIT-DFINPATCGDK 260 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~--ai~la~~~g~~~Vi~~~~~~--~~--------------~~~~~~~g~~-~v~~~~~~~~~ 260 (390)
..++++||+|+ +++|++ .++.+ ..|+ +|++++... .+ .+.+++.|.. ..+.-+-.++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 34678999998 899999 56666 8899 788877322 11 2234455644 23332221222
Q ss_pred CHHHHHHhhcC--CCccEEEEcccCh
Q 016363 261 TVSQVIKEMTD--GGADYCFECIGLT 284 (390)
Q Consensus 261 ~~~~~i~~~~~--~g~D~vid~~g~~ 284 (390)
...+.+.+... |++|+++++.+.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 33333333322 3799999999876
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.44 Score=47.41 Aligned_cols=80 Identities=18% Similarity=0.075 Sum_probs=58.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC-cEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
....+++|+|.|.+|...++.+...|. .|++++.++++.+.+++.+. ..++.-+ ..-.+.+.+..-.++|.|+-
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~~~~~i~gd----~~~~~~L~~~~~~~a~~vi~ 303 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELPNTLVLHGD----GTDQELLEEEGIDEADAFIA 303 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCCCCeEEECC----CCCHHHHHhcCCccCCEEEE
Confidence 346889999999999999999999999 99999999999888876432 2233222 22334455544448999998
Q ss_pred cccChH
Q 016363 280 CIGLTS 285 (390)
Q Consensus 280 ~~g~~~ 285 (390)
+++...
T Consensus 304 ~~~~~~ 309 (453)
T PRK09496 304 LTNDDE 309 (453)
T ss_pred CCCCcH
Confidence 887654
|
|
| >cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2 | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.65 Score=42.29 Aligned_cols=34 Identities=32% Similarity=0.236 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
-+|.+|+|.|-|.+|+.+++++..+|+ +|+++..
T Consensus 36 l~g~~vaIqGfGnVG~~~a~~L~e~Ga-kvvaVsD 69 (254)
T cd05313 36 LKGKRVAISGSGNVAQYAAEKLLELGA-KVVTLSD 69 (254)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 367899999999999999999999999 9997764
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t |
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.51 Score=42.53 Aligned_cols=103 Identities=21% Similarity=0.275 Sum_probs=71.0
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
....++.+|++|+=.|.| .|.+++-||++.|. .+|+.....++..+.+++ +|....+.... .|..+.+.
T Consensus 87 ~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv~~~~~-- 160 (256)
T COG2519 87 VARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDVREGID-- 160 (256)
T ss_pred HHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---cccccccc--
Confidence 367899999999988764 47777788887774 599999999988776643 44333222111 23222221
Q ss_pred cCCCccEEE-EcccChHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCF-ECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
...+|.|| |.-.-...++.+.+.|+++ |.++.+.
T Consensus 161 -~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~ 195 (256)
T COG2519 161 -EEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYS 195 (256)
T ss_pred -ccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEc
Confidence 12799887 6555556788999999999 9998775
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.17 Score=48.32 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=31.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
++.+|||+|+ |.+|...++.+...|. +|+++++.++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEecccc
Confidence 4678999998 9999999999999999 8999887643
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.24 Score=48.17 Aligned_cols=75 Identities=16% Similarity=0.208 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCC------cEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGI------TDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
+..+|||+|+ |.+|...++.+... |. +|++++++.++.+.+...+. -.++..+- .+ .+.+.+... +
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~-~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl---~d-~~~l~~~~~-~ 86 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH-KVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINI---KH-DSRLEGLIK-M 86 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC-EEEEEecCchhhhhhhccccccCCCCeEEEEcCC---CC-hHHHHHHhh-c
Confidence 3467999998 99999999988877 57 89999988776655543321 11221111 11 122333322 5
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|+||.+++
T Consensus 87 ~d~ViHlAa 95 (386)
T PLN02427 87 ADLTINLAA 95 (386)
T ss_pred CCEEEEccc
Confidence 899999886
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.33 Score=45.00 Aligned_cols=96 Identities=9% Similarity=-0.004 Sum_probs=58.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC-CC-ccEEEEc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD-GG-ADYCFEC 280 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~-~g-~D~vid~ 280 (390)
+|||+|+ |.+|..+++.+...|. +|.+++|++++.. ..+... ..|..+ ...+.+.++.... .+ +|.++.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~---~~~~~~~~~d~~d--~~~l~~a~~~~~~~~g~~d~v~~~ 74 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSA---GPNEKHVKFDWLD--EDTWDNPFSSDDGMEPEISAVYLV 74 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCcccc---CCCCccccccCCC--HHHHHHHHhcccCcCCceeEEEEe
Confidence 4899998 9999999999888898 8999999987642 123322 224333 2233333332111 26 8999877
Q ss_pred ccCh----HHHHHHHHHhccCC-ceEEEEcc
Q 016363 281 IGLT----SVMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 281 ~g~~----~~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
.+.. ......++.++..+ .+++.++.
T Consensus 75 ~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 75 APPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 6632 12334555555541 36776653
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.42 Score=46.29 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|..++..+...|..+++.++..
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45689999999999999999999999899998855
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.39 Score=45.94 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=33.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
.++.+|||+|+ |.+|...+..+...|. +|++++++.++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGY-TVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCchh
Confidence 35778999998 9999999999988999 99999987664
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.25 Score=47.01 Aligned_cols=94 Identities=15% Similarity=0.132 Sum_probs=61.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
-.+.+|+|+|+ |.+|..+++.+. ..|.++++.+.+++++...+. +++...+ .++.+.+ ..+|+|
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i--------~~l~~~l-----~~aDiV 219 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI--------LSLEEAL-----PEADIV 219 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH--------HhHHHHH-----ccCCEE
Confidence 46789999999 999999888776 457669999999888776654 3321111 1222222 169999
Q ss_pred EEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 278 FECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+.+++....+..-...+++. -.+++++.+.
T Consensus 220 v~~ts~~~~~~I~~~~l~~~-~~viDiAvPR 249 (340)
T PRK14982 220 VWVASMPKGVEIDPETLKKP-CLMIDGGYPK 249 (340)
T ss_pred EECCcCCcCCcCCHHHhCCC-eEEEEecCCC
Confidence 99998755332222455666 7778887553
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.21 Score=45.10 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=47.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHHH-hc----CCcE--EE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGK-KF----GITD--FI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~-~~----g~~~--v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+||+|+ |.+|...++.+...|+ +|++++++ +++.+.+. .+ +... .+ |..+ ...+.+.+.+... +
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD--EAQWQALLAQAADAMG 78 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 789998 9999999998888899 99999987 55544332 22 1111 11 2222 2233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (251)
T PRK07069 79 GLSVLVNNAGV 89 (251)
T ss_pred CccEEEECCCc
Confidence 79999999874
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.25 Score=46.28 Aligned_cols=86 Identities=15% Similarity=0.144 Sum_probs=54.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC-CcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG-DKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|+|+|+|.+|.+.+..+...|. +|+.+++++++.+.+++.|... +..+.. .........+. +.+|+||-++..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58999999999998888888898 8999999888877776655421 100000 00000111111 379999999886
Q ss_pred hHHHHHHHHHhcc
Q 016363 284 TSVMNDAFNSSRE 296 (390)
Q Consensus 284 ~~~~~~~~~~l~~ 296 (390)
.. +..+++.+++
T Consensus 77 ~~-~~~~~~~l~~ 88 (304)
T PRK06522 77 YQ-LPAALPSLAP 88 (304)
T ss_pred cc-HHHHHHHHhh
Confidence 65 5555554443
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.22 Score=52.09 Aligned_cols=78 Identities=24% Similarity=0.250 Sum_probs=52.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ..+... ++ |-.+ ..++.+.+.+... +
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD--SAAVDHTVKDILAEHG 447 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHhcC
Confidence 678999998 9999999998888899 9999999988765442 223322 22 2222 1233333433322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 448 ~id~li~~Ag~ 458 (657)
T PRK07201 448 HVDYLVNNAGR 458 (657)
T ss_pred CCCEEEECCCC
Confidence 69999999884
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.27 Score=42.43 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=28.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
++||+|+ |++|+..++.+...+.++++.+.++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 6899987 9999999999988888799999998
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.96 Score=42.54 Aligned_cols=96 Identities=13% Similarity=0.137 Sum_probs=60.6
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
.+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.+..+|... . .+..+.+ ....
T Consensus 28 ~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~-----~~~~e~~----~~~a 93 (304)
T PLN02256 28 QEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---F-----RDPDDFC----EEHP 93 (304)
T ss_pred hHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---e-----CCHHHHh----hCCC
Confidence 344444566789999999999999998888887 8999998864 35555666532 1 1222222 1247
Q ss_pred cEEEEcccChHHHHHHHHH-----hccCCceEEEEcc
Q 016363 275 DYCFECIGLTSVMNDAFNS-----SREGWGKTVILGV 306 (390)
Q Consensus 275 D~vid~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 306 (390)
|+||-|+.... +...++. ++++ ..++.++.
T Consensus 94 DvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 94 DVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 88888887654 3333333 3344 55666653
|
|
| >PLN03013 cysteine synthase | Back alignment and domain information |
|---|
Probab=93.81 E-value=1.1 Score=44.05 Aligned_cols=56 Identities=20% Similarity=0.171 Sum_probs=42.8
Q ss_pred HHhCCCCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEec---CChhhHHHHHhcCCcEEE
Q 016363 196 KVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVD---INPEKFEIGKKFGITDFI 252 (390)
Q Consensus 196 ~~~~~~~g~~VlI~G-ag~vG~~ai~la~~~g~~~Vi~~~---~~~~~~~~~~~~g~~~v~ 252 (390)
+...+.+|.+.+|.. +|..|.+.+.+++.+|+ +++++. .+++|++.++.+|++.++
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~-~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGY-RLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCC-CEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 455578886666665 59999999999999999 555553 346788889999987664
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.61 Score=43.52 Aligned_cols=94 Identities=15% Similarity=0.215 Sum_probs=65.8
Q ss_pred hccccchhhHHHHHHHHhCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhhHHHHHhcCCcEEEcCCCC
Q 016363 181 CLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKKFGITDFINPATC 257 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~~~~~g~~~v~~~~~~ 257 (390)
..+||+....+..| +..+. -.|.+|+|+|- +.+|.-.+.++...|+ .|++.. +++
T Consensus 136 ~~~PcTp~ai~~ll-~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~-------------------- 193 (296)
T PRK14188 136 ALVPCTPLGCMMLL-RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR-------------------- 193 (296)
T ss_pred CCcCCCHHHHHHHH-HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC--------------------
Confidence 34666655444433 44444 57999999995 9999999999999999 888874 332
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++.+.++ .+|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 194 ---~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 194 ---DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred ---CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 1222222 4899999999987555443 7877 888888854
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.32 Score=47.04 Aligned_cols=45 Identities=16% Similarity=0.026 Sum_probs=36.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
...+.+|||+|+ |.+|..++..+...|+ +|+++.++.++.+.++.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 445789999998 9999999999999999 89888877666554443
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.6 Score=43.19 Aligned_cols=95 Identities=21% Similarity=0.198 Sum_probs=66.2
Q ss_pred hccccchhhHHHHHHHHhCCC-CCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC
Q 016363 181 CLLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~~-~g~~VlI~Gag-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 258 (390)
..+||+....+. +.+..++. .|.+|+|+|.| .+|.-.+.++...|+ +|.+.... .
T Consensus 135 ~~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~-------------------t-- 191 (285)
T PRK14191 135 GFVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL-------------------T-- 191 (285)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC-------------------c--
Confidence 346666554444 44555554 69999999985 899999999999999 88776321 1
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+|+-++|.+..+ --+.++++ ..++.+|..
T Consensus 192 -~~l~~~~~-----~ADIvV~AvG~p~~i--~~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 192 -KDLSFYTQ-----NADIVCVGVGKPDLI--KASMVKKG-AVVVDIGIN 231 (285)
T ss_pred -HHHHHHHH-----hCCEEEEecCCCCcC--CHHHcCCC-cEEEEeecc
Confidence 23333333 489999999987732 24567887 889999854
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=93.78 E-value=1.2 Score=38.51 Aligned_cols=97 Identities=20% Similarity=0.263 Sum_probs=60.8
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i~~~ 269 (390)
....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++. . +... .
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~-~-----d~~~----~ 93 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP-G-----EAPI----E 93 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe-c-----Cchh----h
Confidence 556778899999888743 5555666665532399999999987776643 33322 222 1 1111 1
Q ss_pred cCCCccEEEEcccC---hHHHHHHHHHhccCCceEEEE
Q 016363 270 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 270 ~~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 304 (390)
..+.+|+|+..... ...+..+.+.|+++ |+++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 12379999854321 12356788999998 988754
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.46 Score=47.28 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=55.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|+|+|+|.+|...++.+...|. .|+++++++++.+.+++ .+...+.. +. .-...+.+..-+++|.++-+++.
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~~~~g-d~----~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVRTVVG-NG----SSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEEEEEe-CC----CCHHHHHHcCCCcCCEEEEecCC
Confidence 68999999999999999999998 89999999999888876 55444332 21 22334444433489999998887
Q ss_pred hH
Q 016363 284 TS 285 (390)
Q Consensus 284 ~~ 285 (390)
..
T Consensus 76 ~~ 77 (453)
T PRK09496 76 DE 77 (453)
T ss_pred hH
Confidence 55
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.31 Score=46.77 Aligned_cols=48 Identities=19% Similarity=0.175 Sum_probs=37.8
Q ss_pred hHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 189 TGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 189 tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
|||.-+.....++ +.+|||+|+ |.+|...+..+...|. +|+++++...
T Consensus 2 ~~~~~~~~~~~~~-~~~vlVtGatGfiG~~lv~~L~~~g~-~V~~~d~~~~ 50 (348)
T PRK15181 2 TAYEELRTKLVLA-PKRWLITGVAGFIGSGLLEELLFLNQ-TVIGLDNFST 50 (348)
T ss_pred chhhhhhhccccc-CCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 6777654444444 468999998 9999999999998898 9999987554
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.43 Score=44.81 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=32.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.|.+|.|+|.|.+|...+++++..|. +|++.+++.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~ 155 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSY 155 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 58999999999999999999999999 999999763
|
|
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.53 Score=52.15 Aligned_cols=98 Identities=16% Similarity=0.213 Sum_probs=58.7
Q ss_pred cchhhHHHHHHHHhCCCCCCEEEEEcCCh--H---------HHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-
Q 016363 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGA--V---------GLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI- 252 (390)
Q Consensus 185 ~~~~tA~~~l~~~~~~~~g~~VlI~Gag~--v---------G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~- 252 (390)
.++..||.+...-.+-..=.+|||+|+|+ + |..++..++.+|+ +|+.++.++.....-..+ ++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~yi 82 (1102)
T PLN02735 5 DTVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTYI 82 (1102)
T ss_pred ccceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEEe
Confidence 34555676542323333346899999977 4 4457888889999 999999887542111112 34332
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHH
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDA 290 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~ 290 (390)
.+.+ . +.+.++... ++|.|+-+.|+..++..+
T Consensus 83 ~p~~---~---e~v~~ii~~e~~D~Iip~~gg~~gl~la 115 (1102)
T PLN02735 83 APMT---P---ELVEQVIAKERPDALLPTMGGQTALNLA 115 (1102)
T ss_pred CCCC---H---HHHHHHHHHhCCCEEEECCCchhhHHHH
Confidence 2222 2 234443333 899999998877655433
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.84 Score=43.00 Aligned_cols=89 Identities=22% Similarity=0.299 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.-.|.+|.|+|-|.+|.+.++.++..|. +|++..+.....+.+...|... . ++.+.+. ..|+|+-
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~v-~--------sl~Eaak-----~ADVV~l 77 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFEV-M--------SVSEAVR-----TAQVVQM 77 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCEE-C--------CHHHHHh-----cCCEEEE
Confidence 3468999999999999999999999999 8888776555555666666521 1 2333333 5899998
Q ss_pred cccChHH---H-HHHHHHhccCCceEEEEc
Q 016363 280 CIGLTSV---M-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 280 ~~g~~~~---~-~~~~~~l~~~~G~~v~~g 305 (390)
+++.+.. + ...+..|+++ .++.++
T Consensus 78 lLPd~~t~~V~~~eil~~MK~G--aiL~f~ 105 (335)
T PRK13403 78 LLPDEQQAHVYKAEVEENLREG--QMLLFS 105 (335)
T ss_pred eCCChHHHHHHHHHHHhcCCCC--CEEEEC
Confidence 8876442 1 2345666654 444443
|
|
| >PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.21 Score=45.31 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=63.1
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHH-H
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQ-V 265 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~-~ 265 (390)
+...+++.||++|+=.|.| .|.++..+++..| -.+|+..+.++++.+.+++ +|.. ..+... |+.+ .
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-----Dv~~~g 105 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-----DVCEEG 105 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES------GGCG-
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-----ceeccc
Confidence 3467899999999998753 3555566666655 2389999999998877643 5543 222222 2211 1
Q ss_pred HHhhcCCCccEEE-EcccChHHHHHHHHHh-ccCCceEEEEc
Q 016363 266 IKEMTDGGADYCF-ECIGLTSVMNDAFNSS-REGWGKTVILG 305 (390)
Q Consensus 266 i~~~~~~g~D~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~g 305 (390)
..+-....+|.|| |--.-..++..+.+.| +++ |+++.+.
T Consensus 106 ~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fs 146 (247)
T PF08704_consen 106 FDEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFS 146 (247)
T ss_dssp -STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEE
T ss_pred ccccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEEC
Confidence 1100123689987 5554455789999999 788 9998885
|
; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A. |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.3 Score=51.25 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=47.6
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+++.+|||+|+ |.+|...++.+... |. +|+++++.+...........-.++..+- .+..+.+.+... ++|+|
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~gDl---~d~~~~l~~~l~-~~D~V 386 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNY-EVYGLDIGSDAISRFLGHPRFHFVEGDI---SIHSEWIEYHIK-KCDVV 386 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCc-EEEEEeCCchhhhhhcCCCceEEEeccc---cCcHHHHHHHhc-CCCEE
Confidence 457889999998 99999999888765 68 9999998765433222111112222111 111112222222 69999
Q ss_pred EEccc
Q 016363 278 FECIG 282 (390)
Q Consensus 278 id~~g 282 (390)
|.+++
T Consensus 387 iHlAa 391 (660)
T PRK08125 387 LPLVA 391 (660)
T ss_pred EECcc
Confidence 99776
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.7 Score=42.81 Aligned_cols=94 Identities=16% Similarity=0.235 Sum_probs=66.0
Q ss_pred ccccchhhHHHHHHHHhCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC
Q 016363 182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 259 (390)
.+||+....+. +.+..++ -.|.+|+|+|. ..+|.-.+.++...|+ +|+...+ ..
T Consensus 137 ~~PcTp~aii~-lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs-------------------~t--- 192 (285)
T PRK14189 137 FRPCTPYGVMK-MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHS-------------------KT--- 192 (285)
T ss_pred CcCCCHHHHHH-HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecC-------------------CC---
Confidence 45665444443 3355554 47999999998 5569999999999999 8887532 11
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+|+-++|.+..+. -+.++++ ..++.+|..
T Consensus 193 ~~l~~~~~-----~ADIVV~avG~~~~i~--~~~ik~g-avVIDVGin 232 (285)
T PRK14189 193 RDLAAHTR-----QADIVVAAVGKRNVLT--ADMVKPG-ATVIDVGMN 232 (285)
T ss_pred CCHHHHhh-----hCCEEEEcCCCcCccC--HHHcCCC-CEEEEcccc
Confidence 34444443 4899999999877333 3789988 899999854
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.38 Score=45.97 Aligned_cols=73 Identities=15% Similarity=0.213 Sum_probs=44.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+|||+|+ |.+|...++.+... |. +|++++++.++...+.....-.++..+-.++..+ +.++.. ++|+||++++
T Consensus 3 ~ilVtGatGfiGs~l~~~L~~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~---~~~~~~-~~d~ViH~aa 77 (347)
T PRK11908 3 KVLILGVNGFIGHHLSKRILETTDW-EVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEW---IEYHVK-KCDVILPLVA 77 (347)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCC-eEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHH---HHHHHc-CCCEEEECcc
Confidence 6999998 99999999888765 67 8999998766544332211112222111001122 222222 6999999765
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.38 Score=43.69 Aligned_cols=79 Identities=22% Similarity=0.270 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh----hhHHH----HHhcCCcE-EE--cCCCCCCcCHHHHHHhh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEI----GKKFGITD-FI--NPATCGDKTVSQVIKEM 269 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~----~~~~~----~~~~g~~~-v~--~~~~~~~~~~~~~i~~~ 269 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+. ++..+.+. .+ |..+ ..++.+.+.+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~ 83 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT--AAAVEKLFDDA 83 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC--HHHHHHHHHHH
Confidence 4678999998 9999999999888999 666665332 22221 22234332 22 2222 12233333332
Q ss_pred cC--CCccEEEEcccC
Q 016363 270 TD--GGADYCFECIGL 283 (390)
Q Consensus 270 ~~--~g~D~vid~~g~ 283 (390)
.. +++|++|.+.|.
T Consensus 84 ~~~~~~id~li~~ag~ 99 (257)
T PRK12744 84 KAAFGRPDIAINTVGK 99 (257)
T ss_pred HHhhCCCCEEEECCcc
Confidence 22 379999998885
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=93.52 E-value=1.3 Score=42.51 Aligned_cols=97 Identities=15% Similarity=0.083 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC-----------CcE--EEcCCCCCCcCHHHHH
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----------ITD--FINPATCGDKTVSQVI 266 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g-----------~~~--v~~~~~~~~~~~~~~i 266 (390)
.....+|||+|+| .|.++..+++.-+..+|++++.+++-.+.++++. ... ++. .|..+.+
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi------~Da~~fL 220 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV------CDAKEFL 220 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE------CcHHHHH
Confidence 4455799999965 5556777777666569999999999888888521 011 111 2334444
Q ss_pred HhhcCCCccEEEEcccCh-----------HHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIGLT-----------SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~-----------~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+ ..+.+|+||--...+ ..+..+.+.|+++ |.++.-.
T Consensus 221 ~~-~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs 268 (374)
T PRK01581 221 SS-PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS 268 (374)
T ss_pred Hh-cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 33 334899998332221 1356788899999 9887654
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.33 Score=42.98 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=62.1
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHHHh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKE 268 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i~~ 268 (390)
....+++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ .+... ++.. +..+.
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~------d~~~~--- 138 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG------DGWKG--- 138 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC------CcccC---
Confidence 3667889999999998753 44444555553 3 89999999887665543 34322 2211 11111
Q ss_pred hcC-CCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 269 MTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.. +.+|+|+.............+.|+++ |+++..-
T Consensus 139 ~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 139 WPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 112 37999986555445467788999998 9886543
|
|
| >PTZ00079 NADP-specific glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.50 E-value=2.8 Score=41.41 Aligned_cols=35 Identities=26% Similarity=0.216 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
-.|.+|+|.|.|.+|..+++.+..+|+ +|++++.+
T Consensus 235 l~Gk~VaVqG~GnVg~~aa~~L~e~Ga-kVVavSD~ 269 (454)
T PTZ00079 235 LEGKTVVVSGSGNVAQYAVEKLLQLGA-KVLTMSDS 269 (454)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEcC
Confidence 368899999999999999999999999 88855433
|
|
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.45 Score=45.00 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.|.+|.|+|.|.+|...+++++.+|+ +|++.++.
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~ 179 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHK 179 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCC
Confidence 47899999999999999999999999 99998764
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.45 Score=43.24 Aligned_cols=81 Identities=11% Similarity=0.094 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
.+.++||+|+ |.+|...++.+...|+ +|+++.+. .++.+.+ +..+... .+..+-.+...+.+.+.+.. .+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999998 9999999998888998 78776653 3443322 2224321 22111101123333333322 13
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 79999999874
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.52 Score=45.10 Aligned_cols=94 Identities=17% Similarity=0.259 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
+++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++ .+.. .++.. +..+ + .+.++.
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~------D~~~-~-~~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVA------DALN-Q-PFEDGQ 186 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc------Cccc-C-CCCCCC
Confidence 788999999885 35566777777788 99999999987766654 2321 11111 1110 0 112337
Q ss_pred ccEEEEcccC------hHHHHHHHHHhccCCceEEEEc
Q 016363 274 ADYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 274 ~D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
||+|+..-.. ...+..+.+.|+++ |+++...
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~ 223 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVT 223 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence 9999864332 22467888999999 9998764
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.43 E-value=1.2 Score=38.78 Aligned_cols=63 Identities=14% Similarity=0.285 Sum_probs=39.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
++||+|+ |++|...+..+... . +|+.+++++.. .-.|-.+ ..++.+.+.++ +++|+++.+.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~~----------~~~D~~~--~~~~~~~~~~~--~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSGD----------VQVDITD--PASIRALFEKV--GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCCc----------eEecCCC--hHHHHHHHHhc--CCCCEEEECCCC
Confidence 6899998 99999888776655 6 89999887531 1223222 12222323221 378999988874
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 390 | ||||
| 3uko_A | 378 | Crystal Structure Of S-Nitrosoglutathione Reductase | 4e-78 | ||
| 4dl9_A | 396 | Crystal Structure Of S-nitrosoglutathione Reductase | 8e-77 | ||
| 1teh_A | 373 | Structure Of Human Liver Chichi Alcohol Dehydrogena | 1e-67 | ||
| 1mc5_A | 374 | Ternary Complex Of Human Glutathione-Dependent Form | 1e-67 | ||
| 2fzw_A | 373 | Structure Of The Binary Complex Of The E67l Mutant | 1e-67 | ||
| 3qj5_A | 374 | S-Nitrosoglutathione Reductase (Gsnor) In Complex W | 1e-67 | ||
| 1cdo_A | 374 | Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co | 1e-65 | ||
| 1hdy_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 5e-63 | ||
| 1axg_A | 374 | Crystal Structure Of The Val203->ala Mutant Of Live | 3e-62 | ||
| 6adh_A | 374 | Structure Of Triclinic Ternary Complex Of Horse Liv | 4e-62 | ||
| 1qv6_A | 374 | Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG | 4e-62 | ||
| 1hdx_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 5e-62 | ||
| 1n8k_A | 374 | Horse Liver Alcohol Dehydrogenase Val292thr Mutant | 5e-62 | ||
| 3oq6_A | 374 | Horse Liver Alcohol Dehydrogenase A317c Mutant Comp | 6e-62 | ||
| 1hdz_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 8e-62 | ||
| 1ju9_A | 374 | Horse Liver Alcohol Dehydrogenase Val292ser Mutant | 8e-62 | ||
| 1ht0_A | 374 | Human Gamma-2 Alcohol Dehydrogense Length = 374 | 9e-62 | ||
| 1a71_A | 374 | Ternary Complex Of An Active Site Double Mutant Of | 1e-61 | ||
| 1qlh_A | 374 | Horse Liver Alcohol Dehydrogenase Complexed To Nad | 2e-61 | ||
| 1axe_A | 374 | Crystal Structure Of The Active-Site Mutant Phe93-> | 2e-61 | ||
| 1ee2_B | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 3e-61 | ||
| 1ee2_A | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 3e-61 | ||
| 1mgo_A | 374 | Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L | 3e-61 | ||
| 1htb_A | 374 | Crystallization Of Human Beta3 Alcohol Dehydrogenas | 6e-61 | ||
| 3cos_A | 381 | Crystal Structure Of Human Class Ii Alcohol Dehydro | 7e-60 | ||
| 1hso_A | 374 | Human Alpha Alcohol Dehydrogenase (Adh1a) Length = | 3e-59 | ||
| 1e3l_A | 376 | P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase | 6e-58 | ||
| 1e3e_A | 376 | Mouse Class Ii Alcohol Dehydrogenase Complex With N | 9e-57 | ||
| 1d1t_A | 373 | Mutant Of Human Sigma Alcohol Dehydrogenase With Le | 5e-56 | ||
| 1agn_A | 373 | X-Ray Structure Of Human Sigma Alcohol Dehydrogenas | 9e-56 | ||
| 1p0c_A | 373 | Crystal Structure Of The Nadp(H)-Dependent Vertebra | 3e-55 | ||
| 1f8f_A | 371 | Crystal Structure Of Benzyl Alcohol Dehydrogenase F | 5e-23 | ||
| 1vj0_A | 380 | Crystal Structure Of Alcohol Dehydrogenase (Tm0436) | 6e-09 | ||
| 3meq_A | 365 | Crystal Structure Of Alcohol Dehydrogenase From Bru | 2e-08 | ||
| 1rjw_A | 339 | Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd | 2e-08 | ||
| 3pii_A | 339 | Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog | 2e-08 | ||
| 3ftn_A | 352 | Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO | 2e-07 | ||
| 3fsr_A | 352 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 4e-07 | ||
| 2dfv_A | 347 | Hyperthermophilic Threonine Dehydrogenase From Pyro | 2e-06 | ||
| 2d8a_A | 348 | Crystal Structure Of Ph0655 From Pyrococcus Horikos | 2e-06 | ||
| 2nvb_A | 352 | Contribution Of Pro275 To The Thermostability Of Th | 5e-06 | ||
| 1llu_A | 342 | The Ternary Complex Of Pseudomonas Aeruginosa Alcoh | 7e-06 | ||
| 1ykf_A | 352 | Nadp-Dependent Alcohol Dehydrogenase From Thermoana | 1e-05 | ||
| 2xaa_A | 345 | Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube | 2e-05 | ||
| 2b83_A | 351 | A Single Amino Acid Substitution In The Clostridium | 3e-05 | ||
| 1ped_A | 351 | Bacterial Secondary Alcohol Dehydrogenase (Apo-Form | 3e-05 | ||
| 4ej6_A | 370 | Crystal Structure Of A Putative Zinc-Binding Dehydr | 3e-05 | ||
| 2h6e_A | 344 | Crystal Structure Of The D-Arabinose Dehydrogenase | 6e-05 | ||
| 1jqb_A | 351 | Alcohol Dehydrogenase From Clostridium Beijerinckii | 1e-04 | ||
| 3gfb_A | 350 | L-Threonine Dehydrogenase (Tktdh) From The Hyperthe | 1e-04 | ||
| 2dq4_A | 343 | Crystal Structure Of Threonine 3-Dehydrogenase Leng | 7e-04 | ||
| 3fpl_A | 351 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 8e-04 |
| >pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378 | Back alignment and structure |
|
| >pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396 | Back alignment and structure |
|
| >pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373 | Back alignment and structure |
|
| >pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374 | Back alignment and structure |
|
| >pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373 | Back alignment and structure |
|
| >pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374 | Back alignment and structure |
|
| >pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374 | Back alignment and structure |
|
| >pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374 | Back alignment and structure |
|
| >pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374 | Back alignment and structure |
|
| >pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374 | Back alignment and structure |
|
| >pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374 | Back alignment and structure |
|
| >pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374 | Back alignment and structure |
|
| >pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381 | Back alignment and structure |
|
| >pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374 | Back alignment and structure |
|
| >pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373 | Back alignment and structure |
|
| >pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373 | Back alignment and structure |
|
| >pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373 | Back alignment and structure |
|
| >pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371 | Back alignment and structure |
|
| >pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380 | Back alignment and structure |
|
| >pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365 | Back alignment and structure |
|
| >pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339 | Back alignment and structure |
|
| >pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339 | Back alignment and structure |
|
| >pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347 | Back alignment and structure |
|
| >pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348 | Back alignment and structure |
|
| >pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352 | Back alignment and structure |
|
| >pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342 | Back alignment and structure |
|
| >pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352 | Back alignment and structure |
|
| >pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345 | Back alignment and structure |
|
| >pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351 | Back alignment and structure |
|
| >pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351 | Back alignment and structure |
|
| >pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370 | Back alignment and structure |
|
| >pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344 | Back alignment and structure |
|
| >pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351 | Back alignment and structure |
|
| >pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350 | Back alignment and structure |
|
| >pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373 | Back alignment and structure |
|---|
Score = 554 bits (1430), Expect = 0.0
Identities = 177/377 (46%), Positives = 238/377 (63%), Gaps = 4/377 (1%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
A +VI+CKAA+ GKPL IEEIEV PPKA E+RIKI+ T++CH+D S P+
Sbjct: 1 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTL--SGADPEG 58
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
PVI GH G+VESVGE V ++K D V+P++ CGEC+ C + K+N C K
Sbjct: 59 CFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 118
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
+ DGTSRF KG I H++ S+F+EY+VV V KI P PL CLL CG+ST
Sbjct: 119 KGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
G GAA A +E GS A+FGLG VGLAV G ++ AS+IIGVDIN +KF K+FG T
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
+ INP K + +V+ EMTDGG DY FECIG VM A + +GWG +V++GV
Sbjct: 238 ECINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS 296
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
G I+ +++ GR+ GT FGG K + L +Y+ K++ + EF+TH +SF +INK
Sbjct: 297 GEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINK 356
Query: 370 AFDLLLEGKSLRCIIWM 386
AF+L+ GKS+R ++ +
Sbjct: 357 AFELMHSGKSIRTVVKI 373
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374 | Back alignment and structure |
|---|
Score = 537 bits (1385), Expect = 0.0
Identities = 168/377 (44%), Positives = 229/377 (60%), Gaps = 5/377 (1%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
GKVI+CKAA+ KPLVIEEIEV+ P A EIRIKI+ T +CH+D+ K
Sbjct: 3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHL--FEGKHKD 60
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
PV+ GHE G+VESVG V E + + V+P+F CGECR C+S K+N C K
Sbjct: 61 GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
P++ +RF KG + FL S+F++Y+VV+ V KI P PL CLL CGVST
Sbjct: 121 PDVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVST 179
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
G GAA A VE GST A+FGLGAVGLA G A +II VD+NP+KFE K FG T
Sbjct: 180 GFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
DF+NP + +SQV+ +MT+GG D+ EC+G VM +A S +GWG +V++G
Sbjct: 240 DFVNPNDH-SEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW-TD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
++ I+++ GR+ G+ FGG K + + + + YLDK++ L EFITH + +N
Sbjct: 298 LHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVND 357
Query: 370 AFDLLLEGKSLRCIIWM 386
A DL+ GK +R ++ +
Sbjct: 358 AIDLMKHGKCIRTVLSL 374
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376 | Back alignment and structure |
|---|
Score = 536 bits (1382), Expect = 0.0
Identities = 155/379 (40%), Positives = 214/379 (56%), Gaps = 11/379 (2%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
GKVI+CKAAI G PL IEEIEV PPKA E+RI+++ T +C +D+ K
Sbjct: 3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK---KKA 59
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
PV+ GHE G+VESVG V K D V+P F C C+ C S +N C K
Sbjct: 60 LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 119
Query: 130 PN----MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
P + D TSRF KG I+HF+ +SSF++Y+VV ++ ++ L CL+ C
Sbjct: 120 PTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGC 178
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
G S+G GAA A V GST A+FGLG VGL+ G ++ AS+II +DIN EKF K
Sbjct: 179 GFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
G TD +NP DK V VI E+T GG DY +C G + A + + GWG ++G
Sbjct: 239 LGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 297
Query: 306 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH 365
+++ +++++ GRS+ GT+FGG K + L Y +K+ +L +TH + F
Sbjct: 298 A--KVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFE 355
Query: 366 DINKAFDLLLEGKSLRCII 384
IN A DL+ EGKS+R I+
Sbjct: 356 SINDAIDLMKEGKSIRTIL 374
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374 | Back alignment and structure |
|---|
Score = 534 bits (1379), Expect = 0.0
Identities = 170/375 (45%), Positives = 227/375 (60%), Gaps = 5/375 (1%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
AGKVI+CKAA+ KP IEE+EV PPKA E+RIK++ T +C SD S L
Sbjct: 3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVV--SGTLVT- 59
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
PLPVI GHEA G+VES+GE V V+ D V+P+F CG+CR CK + N C K
Sbjct: 60 PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
+DGTSRF +G IHHFL S+F++Y+VVD V KI PL CL+ CG ST
Sbjct: 120 RGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
G G+A KVA V GST A+FGLG VGL+V G + A++IIGVDIN +KF K+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
+ +NP K + +V+ EM++GG D+ FE IG M A + +E +G +VI+GV
Sbjct: 239 ECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
+S+N + +L GR+ G FGG K + + L ++ K+ L ITH + F IN+
Sbjct: 298 SQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLLEGKSLRCII 384
FDLL G+S+R I+
Sbjct: 358 GFDLLRSGESIRTIL 372
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373 | Back alignment and structure |
|---|
Score = 534 bits (1378), Expect = 0.0
Identities = 163/375 (43%), Positives = 222/375 (59%), Gaps = 7/375 (1%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
AGK I CKAA+ P KPL +E I V PPKA E+RIKIL + +C SD + +P
Sbjct: 4 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVL--KEIIPS- 60
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
PVI GHEAVGVVES+G V VK D V+P+F CG CR CKSS SN C K G +
Sbjct: 61 KFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK 120
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
+ D TSRF +G I++ + S+FTEY+VV V KI P PL +CL+ CG +T
Sbjct: 121 TGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFAT 178
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
G GAA A V GST A+FGLG VG + G + AS+IIGV + +KF + G T
Sbjct: 179 GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT 238
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
+ +NP DK + +VI E T+GG DY EC G M +A S+ G G TV+LG+
Sbjct: 239 ECLNPKDY-DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP 297
Query: 310 GSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369
+ L+ + +L GRS+ G+ FGG K +++ L Y+ K++N+ ++ +++ INK
Sbjct: 298 NERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINK 356
Query: 370 AFDLLLEGKSLRCII 384
AF+LL G+ +R I+
Sbjct: 357 AFELLSSGQGVRSIM 371
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371 | Back alignment and structure |
|---|
Score = 440 bits (1135), Expect = e-155
Identities = 103/381 (27%), Positives = 178/381 (46%), Gaps = 19/381 (4%)
Query: 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL 71
++ AA+ G ++ +++ P+ E+ +K++ T +CH+D+ P PL
Sbjct: 3 ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVR--DQKYPV-PL 59
Query: 72 PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRG 127
P + GHE G++E++G V E++ D V+ + CG+C C + CS+F G
Sbjct: 60 PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSG 118
Query: 128 YRPNMPRDGTSRFREL-KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 186
+G +G V HF SSF Y++ + VK+T +P+ + L CG
Sbjct: 119 ADS----EGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCG 174
Query: 187 VSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
+ TG GA V S+ +G GAVGL+ A++ AS II VDI + E+ K+
Sbjct: 175 IQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234
Query: 247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
G T IN + IKE+TDGG ++ E G ++ ++ GK ++G
Sbjct: 235 GATHVINSK---TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGA 290
Query: 307 EMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH 365
G+ + ++L G+++ G G P+ I L + Y + + + +F
Sbjct: 291 PQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFD 349
Query: 366 DINKAFDLLLEGKSLRCIIWM 386
+IN+A +G +L+ II +
Sbjct: 350 EINQAAIDSRKGITLKPIIKI 370
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 400 bits (1030), Expect = e-139
Identities = 95/383 (24%), Positives = 162/383 (42%), Gaps = 28/383 (7%)
Query: 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
++ A + +PLV +E E+ I ++IL +C SDV ++ + P++PLP+
Sbjct: 16 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRG--EDPRVPLPI 73
Query: 74 IFGHEAVGVVESVGEYV-----EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY 128
I GHE G V V E +K DL++ CGEC CK SK + Y
Sbjct: 74 ILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY 133
Query: 129 RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIPLGIACLLSCGV 187
N G S + L+G ++ + V+D T V+K++ L + + C
Sbjct: 134 GIN---RGCSEYPHLRG----------CYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSG 180
Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
+T A + G TV I G G +GL AR A +I + +P + ++ ++ G
Sbjct: 181 ATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG 240
Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
+N + + I ++T G GAD+ E G + + + R G G + GV
Sbjct: 241 ADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGV 299
Query: 307 EMHGSPISLNSIE--ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 364
+ P+ E +LK + G + S L + ITH +
Sbjct: 300 AVPQDPVPFKVYEWLVLKNATFKGIWVSD---TSHFVKTVSITSRNYQLLSKLITHRLPL 356
Query: 365 HDINKAFDLLLEGKSLRCIIWMD 387
+ NKA +L+ ++L+ I++ +
Sbjct: 357 KEANKALELMESREALKVILYPE 379
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 1e-75
Identities = 81/366 (22%), Positives = 136/366 (37%), Gaps = 35/366 (9%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KA G V+ +I P EI +K+ LCHSD+ LP+ G
Sbjct: 2 KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC--SKFGRGYRPNMPR 134
HE VG V +GE V D V CG C C + N C + P +
Sbjct: 62 HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGS 121
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-PLGIACLLSCGVSTGVGA 193
G+ EY +VD + + P+ A L G++
Sbjct: 122 PGS-------------------MAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAI 162
Query: 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253
+ + + GST + G+G +G + R A+++I VD++ ++ + ++ G +
Sbjct: 163 SRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK 222
Query: 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
+ I+E+T G GA F+ +G S ++ A G ++G+
Sbjct: 223 S----GAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAHA 277
Query: 313 ISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 372
+ I G SV Y+G RS++ + L++ T + + A+
Sbjct: 278 KVGFFM-IPFGASVVTPYWG---TRSELMEVVALARAGRLDI---HTETFTLDEGPAAYR 330
Query: 373 LLLEGK 378
L EG
Sbjct: 331 RLREGS 336
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 210 bits (538), Expect = 2e-65
Identities = 83/381 (21%), Positives = 142/381 (37%), Gaps = 56/381 (14%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIF 75
+A P + L + + V P EI +++ S+C +D+ WK + P++
Sbjct: 2 RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61
Query: 76 GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM--- 132
GHE GVVE+VG V + D V H C C C++ + C N
Sbjct: 62 GHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVC--------LNTQIL 113
Query: 133 --PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGV 187
RDG F EY VV + +P +A + V
Sbjct: 114 GVDRDGG-------------------FAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV 154
Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
G +V I G G +GL A R + A I+ D NP + + +
Sbjct: 155 -----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA 209
Query: 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
+NP ++ + +V++ +T G + E G + ++ + G G+ ILG+
Sbjct: 210 -DRLVNPL---EEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIP 264
Query: 308 MHGSPISLNSIEILKGRSVCGTYFGGLKPRSD----IATLAQKYLDKELNLGEFITHEVS 363
L +++G + G G + A + +D L +TH +
Sbjct: 265 SDPIRFDLAGELVMRGITAFGIA--GRRLWQTWMQGTALVYSGRVD----LSPLLTHRLP 318
Query: 364 FHDINKAFDLLLEGKSLRCII 384
+AF LL G++++ I+
Sbjct: 319 LSRYREAFGLLASGQAVKVIL 339
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 5e-65
Identities = 76/376 (20%), Positives = 136/376 (36%), Gaps = 48/376 (12%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KA G + + + + P ++ +K+ +C +D PV G
Sbjct: 25 KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP---PVTLG 80
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRD 135
HE G+V G V ++ + + CG C C++ + N C G RD
Sbjct: 81 HEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI----HRD 136
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVG 192
G F EY +V +I + L+C +
Sbjct: 137 G-------------------GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL----- 172
Query: 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
++G++ GSTVAI G G +GL + ARL A+ +I K + ++ G T +
Sbjct: 173 HGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV 232
Query: 253 NPATCGDKTVSQVIKEMTDG---GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309
+P+ V + I G D EC G+ + + ++ G G VILGV
Sbjct: 233 DPS---AGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQ 288
Query: 310 GSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDIN 368
G + + +IL + V G++ R +A ++ + I+ +S +
Sbjct: 289 GEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIE----IDRMISRRISLDEAP 344
Query: 369 KAFDLLLEGKSLRCII 384
++ ++
Sbjct: 345 DVISNPAAAGEVKVLV 360
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 209 bits (535), Expect = 7e-65
Identities = 76/372 (20%), Positives = 144/372 (38%), Gaps = 48/372 (12%)
Query: 17 KAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVI 74
KAA KPL IE+++ +++ ++I +CH+D+ + +L + LP
Sbjct: 17 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 76
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMP 133
GHE VG +E V E VE +++ D V+ G C C++ + C G
Sbjct: 77 LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLN---- 132
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI---ACLLSCGVSTG 190
DG F E+ V+K+ I L+ T
Sbjct: 133 IDGG-------------------FAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITA 173
Query: 191 VGAAWKVAGVEV--GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
A K A + G+ VAI G+G +G + ++ + +I +D+ EK ++ ++ G
Sbjct: 174 YRAV-KKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA 232
Query: 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
++ + + + E+T G G + + +G + ++ G+ +I+G
Sbjct: 233 DHVVDA----RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGY- 286
Query: 308 MHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHD 366
G + +I I S G+ G ++ L L ++ + +
Sbjct: 287 --GGELRFPTIRVISSEVSFEGSLVG---NYVELHELVTLALQGKVRV---EVDIHKLDE 338
Query: 367 INKAFDLLLEGK 378
IN + L +G+
Sbjct: 339 INDVLERLEKGE 350
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 2e-64
Identities = 96/383 (25%), Positives = 153/383 (39%), Gaps = 58/383 (15%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIF 75
A + PG + E++V P E+ IK+L TS+C +D+ ++ + ++ P I
Sbjct: 6 VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65
Query: 76 GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM--- 132
GHE G V +G VE ++ D V H CG+C C+ + + C N
Sbjct: 66 GHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVC--------QNTKIF 117
Query: 133 --PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGV 187
DG F EY+VV ++ K IP A L L V
Sbjct: 118 GVDTDGV-------------------FAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAV 158
Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
T +AG G +V I G G +GL A+ + A +I + + + E+ KK G
Sbjct: 159 DT------VLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVG 212
Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
INP ++ V + + ++TDG G D E G + + G+ +LG+
Sbjct: 213 ADYVINPF---EEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL 268
Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD----IATLAQKYLDKELNLGEFITHEV 362
I N++ I K ++ G G L L+ L ITH+
Sbjct: 269 YPGKVTIDFNNLIIFKALTIYGIT--GRHLWETWYTVSRLLQSGKLN----LDPIITHKY 322
Query: 363 S-FHDINKAFDLLLEGKSLRCII 384
F +AF+L+ GK+ + +
Sbjct: 323 KGFDKYEEAFELMRAGKTGKVVF 345
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 2e-61
Identities = 73/379 (19%), Positives = 136/379 (35%), Gaps = 58/379 (15%)
Query: 17 KAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
K+ + G + + E + E E+R+KI + LC SD+ + P+
Sbjct: 2 KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKN---GAHYYPITL 57
Query: 76 GHEAVGVVESVGEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM- 132
GHE G +++VG V+++ D V P+ C C +C + C
Sbjct: 58 GHEFSGYIDAVGSGVDDLHPGDAVACVPLLP--CFTCPECLKGFYSQC--------AKYD 107
Query: 133 ----PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSC 185
RDG F EY VV +V + +P+ ++
Sbjct: 108 FIGSRRDGG-------------------FAEYIVVKRKNVFALPTDMPIEDGAFIEPITV 148
Query: 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
G+ A+ +A V I G G +GL + A A + +DI+ EK + K
Sbjct: 149 GL-----HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
FG N + + + Q+ + + E G+ + A + + ++
Sbjct: 204 FGAMQTFNSS---EMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALV 259
Query: 305 GVEMHGSPISLNSIE--ILKGRSVCGT--YFGGLKPRSDIATLAQKYLDKELNLGEFITH 360
G ++ + + K +V G+ + P + T ++ +++L+L I H
Sbjct: 260 GTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAH 319
Query: 361 EVSFHDINKAFDLLLEGKS 379
SF +A +
Sbjct: 320 RGSFESFAQAVRDIARNAM 338
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 3e-61
Identities = 78/368 (21%), Positives = 142/368 (38%), Gaps = 43/368 (11%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KAA+ + +PL IE++ + P+ E+ I+I +C +D+ WK LP+I G
Sbjct: 5 KAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILG 64
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRD 135
HE G + VGE + +VK+ D V+ CR C+ K N C G +
Sbjct: 65 HENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQT----TN 119
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA-- 193
G F+EY +V + + + A L+ +T +GA
Sbjct: 120 G-------------------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIR 160
Query: 194 -AWKVAGVEVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251
A V + G+G + + L + I+G+ + + + + G
Sbjct: 161 QALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYV 220
Query: 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310
K +I ++TDG GA + +G + + G +++G+E
Sbjct: 221 SEM-----KDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKR 274
Query: 311 SPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKA 370
+ + + + G+ +G +D+ + + ++ +V DINKA
Sbjct: 275 VSLEAFDT-AVWNKKLLGSNYG---SLNDLEDVVRLSESGKIKP---YIIKVPLDDINKA 327
Query: 371 FDLLLEGK 378
F L EG+
Sbjct: 328 FTNLDEGR 335
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 1e-60
Identities = 78/408 (19%), Positives = 128/408 (31%), Gaps = 63/408 (15%)
Query: 5 SASPKAGKVIRCKAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDV-----T 58
GK+ + + R P + +EE+ K EI IK+ +C SDV
Sbjct: 21 GPKDIEGKLTWLGSKVWRYPE--VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTD 78
Query: 59 FWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER------DLVLPIFHRDCGECRD 112
PV GHE GVV G + + V CG CR
Sbjct: 79 EEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRP 138
Query: 113 CKSSKSNTCSKF-GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171
C N C G+ DG F EY VD + +
Sbjct: 139 CAEGFPNHCENLNELGF----NVDGA-------------------FAEYVKVDAKYAWSL 175
Query: 172 -------TPHIPLGIACL---LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEG 221
L S + + G+ G V I G G +GLA
Sbjct: 176 RELEGVYEGDRLFLAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAVAI 232
Query: 222 ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 280
+ ASK+I + + + + K+ G I+P + + + + T+G GA E
Sbjct: 233 LKHAGASKVILSEPSEVRRNLAKELGADHVIDPT---KENFVEAVLDYTNGLGAKLFLEA 289
Query: 281 IGLTSVMNDAFNS----SREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP 336
G+ ++ +R I+ P++ ++ + G+ G
Sbjct: 290 TGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVF-QVRRAQIVGSQ--GHSG 346
Query: 337 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384
+ +++ + I+ VS +I + L KSL +
Sbjct: 347 HGTFPR-VISLMASGMDMTKIISKTVSMEEIPEYIKRLQTDKSLVKVT 393
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 197 bits (503), Expect = 3e-60
Identities = 85/371 (22%), Positives = 141/371 (38%), Gaps = 43/371 (11%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK------SSTDLPKLP 70
+A GKPL ++EI V PK ++ IK+ +CHSDV + + +
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 71 LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGYR 129
LPV GHE G +E VG+ V + DLV + G C C+ + + C G
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
DG ++ EY +V + + A L+C T
Sbjct: 122 ----FDG-------------------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGIT 158
Query: 190 GVGAAWKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
A + A ++ T+ + G G +G + A+ + IIGVD+ E E K+ G
Sbjct: 159 TYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA 217
Query: 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
IN + + I+ +T+ G D + ++ + + GK V++G+
Sbjct: 218 DYVINAS---MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLF 273
Query: 308 MHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI 367
I L G+ G +SD + + L + + IT + +
Sbjct: 274 GADLHYHAPLI-TLSEIQFVGSLVG---NQSDFLGIMR--LAEAGKVKPMITKTMKLEEA 327
Query: 368 NKAFDLLLEGK 378
N+A D L K
Sbjct: 328 NEAIDNLENFK 338
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 5e-60
Identities = 72/386 (18%), Positives = 147/386 (38%), Gaps = 57/386 (14%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIF 75
+ + PG L +E + P E+ +++ +C SDV +W+ + P++
Sbjct: 9 LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 76 GHEAVGVVESVGEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM- 132
GHEA G VE VG V+ +K D V P CK + N P++
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAP--RENDEFCKMGRYNLS--------PSIF 117
Query: 133 -----PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LS 184
P DG + + K+ ++ L LS
Sbjct: 118 FCATPPDDGN-------------------LCRFYKHNAAFCYKLPDNVTFEEGALIEPLS 158
Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
G+ A + GV +G V + G G +G+ A+ A++++ D++ + K
Sbjct: 159 VGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK 213
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
+ G + + + +++ ++ + EC G + + ++R G G V++
Sbjct: 214 EIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLV 272
Query: 305 GVEMHGSPISLNSIEI-LKGRSVCGTY-FGGLKPRSDIATLAQKYLDKELNLGEFITHEV 362
G + ++ + ++ + G + + P + I+ LA K ++ + +TH
Sbjct: 273 G--LGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVA-ISMLASKSVN----VKPLVTHRF 325
Query: 363 SFHDINKAFDLLLEGKSLRCIIWMDK 388
+AF+ +G L+ ++ D
Sbjct: 326 PLEKALEAFETFKKGLGLKIMLKCDP 351
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 1e-58
Identities = 79/393 (20%), Positives = 136/393 (34%), Gaps = 55/393 (13%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTF 59
M + ++ G + + I +E ++ K E+ + + T +C SDV F
Sbjct: 1 MASSASKTNIGVFTNPQHDL-WISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHF 59
Query: 60 WKS-STDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKS 118
WK + + GHE+ G V +V V+ +K D V C C C + +
Sbjct: 60 WKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRY 119
Query: 119 NTCSKFGRGYRPNM------PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172
N C + P G Y KI
Sbjct: 120 NGC--------ERVDFLSTPPVPGL-------------------LRRYVNHPAVWCHKI- 151
Query: 173 PHIPLGIACL---LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 229
++ + LS + A + AGV +G V I G G +GL A+ A
Sbjct: 152 GNMSYENGAMLEPLSVAL-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACP 206
Query: 230 IIGVDINPEKFEIGKKFGITDFINPATCGD-KTVSQVIKEMTDG-GADYCFECIGLTSVM 287
++ DI+ + + K+ + + ++ I E G EC G+ S +
Sbjct: 207 LVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSI 266
Query: 288 NDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY-FGGLKPRSDIATLAQK 346
A + + G GK ++GV + I ++ + Y + PR+ I +
Sbjct: 267 AAAIWAVKFG-GKVFVIGVGKNEIQIPFMRA-SVREVDLQFQYRYCNTWPRA-IRLVENG 323
Query: 347 YLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 379
+D L +TH D KAF+ + K+
Sbjct: 324 LVD----LTRLVTHRFPLEDALKAFETASDPKT 352
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 7e-56
Identities = 72/389 (18%), Positives = 129/389 (33%), Gaps = 50/389 (12%)
Query: 17 KAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWK---SSTDLPKLPLP 72
KA I + P + +++++ + +I+I+ + +C +D + + LPK
Sbjct: 2 KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61
Query: 73 VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 132
++ GHEA+GVVE + DLV+P+ R CG CR+C + + C G
Sbjct: 62 LVLGHEAIGVVEES---YHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIH 118
Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI--------PLGI---AC 181
DG E+ D ++VKI I PL +
Sbjct: 119 KMDGF-------------------MREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSI 159
Query: 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
V V G V + G G +G+ R + P + E
Sbjct: 160 EEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVE 219
Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGK 300
+K+ G D + G +++ + G
Sbjct: 220 QTVIEETKTNYYN----SSNGYDKLKDSV-GKFDVIIDATGADVNILGNVIPLLGRN-GV 273
Query: 301 TVILGVEMHGS-PISLNSIE--ILKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLG 355
+ G GS P+ +++ + +++ G G ++ + LA
Sbjct: 274 LGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQA-VVHLASWKTLYPKAAK 332
Query: 356 EFITHEVSFHDINKAFDLLLEGKSLRCII 384
IT VS +D + +L E + I
Sbjct: 333 MLITKTVSINDEKELLKVLREKEHGEIKI 361
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 1e-54
Identities = 79/379 (20%), Positives = 149/379 (39%), Gaps = 60/379 (15%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIF 75
+A+ L +E+ + PK E+ +++ +C SDV +++ + P++
Sbjct: 6 LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 76 GHEAVGVVESVGEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM- 132
GHEA G V VG+ V+ +K+ D V P C C+ CK K N C P++
Sbjct: 65 GHEASGTVVKVGKNVKHLKKGDRVAVEPGVP--CRRCQFCKEGKYNLC--------PDLT 114
Query: 133 -----PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LS 184
P DG Y V K+ ++ L L LS
Sbjct: 115 FCATPPDDGN-------------------LARYYVHAADFCHKLPDNVSLEEGALLEPLS 155
Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
GV A + AGV++G+TV + G G +GL A+ A ++ +P + E+ K
Sbjct: 156 VGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAK 209
Query: 245 KFG--ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTV 302
G +T ++PA + ++ + I+ + +C G + N +R G G +
Sbjct: 210 NCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLM 268
Query: 303 ILGVEMHGSPISLNSIEI-LKGRSVCGTY-FGGLKPRSDIATLAQKYLDKELNLGEFITH 360
++G M +++ + + + + + P + + +A + + + +TH
Sbjct: 269 LVG--MGSQMVTVPLVNACAREIDIKSVFRYCNDYPIA-LEMVASGRCN----VKQLVTH 321
Query: 361 EVSFHDINKAFDLLLEGKS 379
AF+ +
Sbjct: 322 SFKLEQTVDAFEAARKKAD 340
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 6e-50
Identities = 89/369 (24%), Positives = 132/369 (35%), Gaps = 46/369 (12%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIR-----IKILCTSLCHSDVTFWKSSTDLPKLPL 71
K GK + IE E P ++ L + C SD+
Sbjct: 2 KGFAMLSIGK---VGWIEKEKPA---PGPFDAIVRPLAVAPCTSDI--HTVFEGAIGERH 53
Query: 72 PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
+I GHEAVG V VG V++ K D V+ + + G++ +
Sbjct: 54 NMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFS 113
Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVV---DITHVVKITPHIPLGIACLLSCGVS 188
+DG F E+ V D+ + IPL A ++ ++
Sbjct: 114 NVKDGV-------------------FGEFFHVNDADMNLA-HLPKEIPLEAAVMIPDMMT 153
Query: 189 TGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
TG A ++A +++G TV + G+G VGL GA A +I V +I ++G
Sbjct: 154 TGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA 212
Query: 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
TD IN V Q I + TDG G D G A + G +
Sbjct: 213 TDIINYK--NGDIVEQ-ILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYL 268
Query: 308 MHGSPISLNSIEILKGRSVCGTYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SF 364
G I + E G GGL P R + L K ++ + +TH F
Sbjct: 269 GEGDNIDIPRSEWGVGMGH-KHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGF 327
Query: 365 HDINKAFDL 373
+I KAF L
Sbjct: 328 DNIEKAFML 336
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 5e-48
Identities = 100/374 (26%), Positives = 145/374 (38%), Gaps = 60/374 (16%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIF 75
KAA+ R G PL I+E+ V P ++++KI + +CH+D+ D P P LP I
Sbjct: 4 KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADG--DWPVKPTLPFIP 61
Query: 76 GHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMP 133
GHE VG V +VG V VKE D V +P + CG C C C K GY
Sbjct: 62 GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY----S 117
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVG 192
+G + EY V D +V + + + C GV+
Sbjct: 118 VNGG-------------------YGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV--Y 156
Query: 193 AAWKVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
KV G V I G+G AV A A G R + VDI+ K + ++ G
Sbjct: 157 KGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLR------VAAVDIDDAKLNLARRLG 210
Query: 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
+N D + +++ GGA + A R G G + G
Sbjct: 211 AEVAVNAR---DTDPAAWLQKEI-GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNG-- 263
Query: 308 MHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSF 364
+ + +LKG ++ G+ G RSD Q+ LD ++ +
Sbjct: 264 LPPGDFGTPIFDVVLKGITIRGSIVGT---RSD----LQESLDFAAHGDVKATV-STAKL 315
Query: 365 HDINKAFDLLLEGK 378
D+N F L EGK
Sbjct: 316 DDVNDVFGRLREGK 329
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 6e-48
Identities = 59/373 (15%), Positives = 120/373 (32%), Gaps = 49/373 (13%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIF 75
KA + V+ E P++ E ++ L +C +D P+ ++
Sbjct: 2 KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61
Query: 76 GHEAVGVVESVGEYVEEVKERDLVLPIFHR--DCGECRDCKSSKSNTCSKFGRGYRPNMP 133
GHEAVGVV E++E D+V+P R G + + + R +
Sbjct: 62 GHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG 119
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGV-ST 189
G +E+ ++V+I P + L +S +
Sbjct: 120 AHGY-------------------MSEFFTSPEKYLVRI-PRSQAELGFLIEPISITEKAL 159
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGV---DINPEKFEIGK 244
A + A S+ + G G++GL +++ + + D +I +
Sbjct: 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE 219
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304
+ T + +T + + ++ D+ +E G + + G +L
Sbjct: 220 ELDATYVDS-----RQTPVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPN-GVGALL 272
Query: 305 GV---EMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYL-DKELNLGEFIT 359
GV E+ L +++ G+ + + L + +T
Sbjct: 273 GVPSDWAFEVDAGAFHREMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWFLEDLVT 329
Query: 360 HEVSFHDINKAFD 372
+ AFD
Sbjct: 330 GVHPLSEFEAAFD 342
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 2e-47
Identities = 109/373 (29%), Positives = 157/373 (42%), Gaps = 58/373 (15%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIF 75
KAA+ +PL I+E+E E+ ++I +CH+D+ D P P LP+I
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHG--DWPVKPKLPLIP 59
Query: 76 GHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMP 133
GHE VG+VE VG V +K D V +P + CG C C S + C GY
Sbjct: 60 GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY----S 115
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVG 192
DG + EY +VVKI ++ A + C GV+T
Sbjct: 116 VDGG-------------------YAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT--Y 154
Query: 193 AAWKVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
A KV G + G VAI+G+G AV A A G ++ VDI EK E+ K+ G
Sbjct: 155 KALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLN------VVAVDIGDEKLELAKELG 208
Query: 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307
+NP + ++ +KE GG A+NS R G G V++G+
Sbjct: 209 ADLVVNPL---KEDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLP 263
Query: 308 MHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFH 365
PI + +L G + G+ G R D Q+ L E + I
Sbjct: 264 PEEMPIPIFDT-VLNGIKIIGSIVGT---RKD----LQEALQFAAEGKVKTII-EVQPLE 314
Query: 366 DINKAFDLLLEGK 378
IN+ FD +L+G+
Sbjct: 315 KINEVFDRMLKGQ 327
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 161 bits (411), Expect = 1e-46
Identities = 89/376 (23%), Positives = 145/376 (38%), Gaps = 58/376 (15%)
Query: 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVI 74
K I L ++I V PKA E+ I + + +CH+D+ W D P + LP++
Sbjct: 6 QKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHG--DWPLPVKLPLV 63
Query: 75 FGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNM 132
GHE GVV +GE V+ K D + + C C C+ + C GY
Sbjct: 64 GGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY---- 119
Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGV 191
DG+ F +Y+ D I L + C G++
Sbjct: 120 THDGS-------------------FQQYATADAVQAAHIPQGTDLAQVAPILCAGITV-- 158
Query: 192 GAAWKVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245
A K A + G VAI G AV A A G R ++G+D K E+ +
Sbjct: 159 YKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYR------VLGIDGGEGKEELFRS 212
Query: 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
G FI+ D + + + TDGGA + + + R G TV++G
Sbjct: 213 IGGEVFIDFTKEKD--IVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVG 269
Query: 306 VEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEV 362
+ G+ + ++K S+ G+Y G R+D ++ LD + I V
Sbjct: 270 M-PAGAKCCSDVFNQVVKSISIVGSYVGN---RAD----TREALDFFARGLVKSPI-KVV 320
Query: 363 SFHDINKAFDLLLEGK 378
+ + ++ + +G+
Sbjct: 321 GLSTLPEIYEKMEKGQ 336
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 5e-37
Identities = 84/368 (22%), Positives = 129/368 (35%), Gaps = 66/368 (17%)
Query: 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
+K++ T++C SD + T ++ GHE G V G VE ++ DLV F+
Sbjct: 38 LKVVSTNICGSDQHMVRGRTTAQV---GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFN 94
Query: 105 RDCGECRDCKSSKSNTC--SKFGR-----GYRPNMPRDGTSRFRELKGDVIHHFLNISSF 157
CG CR CK + C R GY G
Sbjct: 95 VACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGG-------------------Q 135
Query: 158 TEYSVV---DITHVV---KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL 211
EY +V D + + + LS + TG A AGV GSTV + G
Sbjct: 136 AEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA 194
Query: 212 GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD 271
G VGLA A ARL A+ +I D+NP + K G D + + I +
Sbjct: 195 GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSL---DTPLHEQIAALLG 251
Query: 272 G-GADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315
D + +G +V+N +R GK I G+ + P ++
Sbjct: 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAV 310
Query: 316 NSIEILKGRSV-CGTYF-------GGLKP-RSDIATLAQKYLDKELNLGE-FITHEVSFH 365
++ + S+ G + G P L Q + +N+ E +S
Sbjct: 311 DAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLD 370
Query: 366 DINKAFDL 373
D + +
Sbjct: 371 DAPRGYGE 378
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 1e-35
Identities = 80/361 (22%), Positives = 128/361 (35%), Gaps = 51/361 (14%)
Query: 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 104
+K++ T++C SD ++ +PK + GHE G V G VE + DLV F+
Sbjct: 37 LKVVSTNICGSDQHIYRGRFIVPK---GHVLGHEITGEVVEKGSDVELMDIGDLVSVPFN 93
Query: 105 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV- 163
CG CR+CK ++S+ C N D + F EY +V
Sbjct: 94 VACGRCRNCKEARSDVCENNL----VNPDADLGA-FGFDLKGWS------GGQAEYVLVP 142
Query: 164 --DITHVV---KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
D + K + L+S + TG AGV+ GS V I G G VG
Sbjct: 143 YADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCA 201
Query: 219 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277
A GARL A+ +I D NPE+ ++ G I+ + I ++ D
Sbjct: 202 AAGARLLGAACVIVGDQNPERLKLLSDAGFET-IDLRN--SAPLRDQIDQILGKPEVDCG 258
Query: 278 FECIGL--------------TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 323
+ +G +N F+ R G G I G+ + P +N
Sbjct: 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGR 317
Query: 324 RSV-CGTYF-------GGLKP-RSDIATLAQKYLDKELNLG--EFITHEVSFHDINKAFD 372
+ G + G+ P + L + L ++ ++ +
Sbjct: 318 LHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYA 377
Query: 373 L 373
Sbjct: 378 K 378
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-29
Identities = 81/379 (21%), Positives = 138/379 (36%), Gaps = 64/379 (16%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
+A + R G P L + ++ V P E+R+++ +L H DV K PKLPLP +
Sbjct: 2 RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVA-SPKLPLPHV 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
G + GVV++VG VE D V+ CG C C + + N C ++ R
Sbjct: 61 LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQ---ILGEHR 117
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
GT + EY V+ ++ ++ A + T A
Sbjct: 118 HGT-------------------YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLT----A 154
Query: 195 W----KVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
W GV G V + G A+ +A GAR +I + +K K
Sbjct: 155 WQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR------VIATAGSEDKLRRAK 208
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI 303
G + +N D + ++ +T G GAD + G ++ G G+ I
Sbjct: 209 ALGADETVNYTH-PD--WPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIAI 263
Query: 304 LGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEF---IT 359
G G +L + + S+ G+ +S + + + + G+ +
Sbjct: 264 AGA-SSGYEGTLPFAHVFYRQLSILGSTMA---SKSRLFPILRF-----VEEGKLKPVVG 314
Query: 360 HEVSFHDINKAFDLLLEGK 378
+ + LL E +
Sbjct: 315 QVLPLEAAAEGHRLLEERR 333
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 6e-26
Identities = 72/373 (19%), Positives = 118/373 (31%), Gaps = 59/373 (15%)
Query: 17 KAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
+ L + E V +I ++ L SL + D ++ L P +
Sbjct: 29 QEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMG-LDLAFPFVP 87
Query: 76 GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
+ GVVE+VG+ V + D V+ F + + ++ G
Sbjct: 88 ASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLG------GAHP 141
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
G +EY V+ V + A L C T AW
Sbjct: 142 GV-------------------LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLT----AW 178
Query: 196 ----KVAGVEVGSTVAIFGLGAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
+ + G V + G G V +A A GA +I + EK +
Sbjct: 179 FALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAE------VIVTSSSREKLDRAFAL 232
Query: 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305
G IN D + + +T GAD+ E G + + + + G+ ++G
Sbjct: 233 GADHGINRLE-ED--WVERVYALTGDRGADHILEIAG-GAGLGQSLKAVAPD-GRISVIG 287
Query: 306 VEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 364
V + G +S +L K V G G R + L L I F
Sbjct: 288 V-LEGFEVSGPVGPLLLKSPVVQGISVG---HRRALEDLVGAVDRLGLKP--VIDMRYKF 341
Query: 365 HDINKAFDLLLEG 377
++ +A L G
Sbjct: 342 TEVPEALAHLDRG 354
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 6e-25
Identities = 64/405 (15%), Positives = 122/405 (30%), Gaps = 79/405 (19%)
Query: 17 KAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDV---------------T 58
A + P + ++++ V E + ++ +S+ ++ V
Sbjct: 44 FAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER 103
Query: 59 FWKSSTDLPKLPLPV-IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSK 117
+ + S + LP + G + GVV G V + D V+ E D +
Sbjct: 104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDT 163
Query: 118 SNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL 177
+ G+ N G E ++V ++ H+
Sbjct: 164 MLDPEQRIWGFETN---FGG-------------------LAEIALVKSNQLMPKPDHLSW 201
Query: 178 GIACLLSCGVSTGVGA--AWKVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASK 229
A ST + AG++ G V I+G A A+A GA
Sbjct: 202 EEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGAN------ 255
Query: 230 IIGVDINPEKFEIGKKFGITDFIN--------------PATCGDKTVSQVIKEMTDG-GA 274
I V +P+K EI + G I+ K + I+E+T G
Sbjct: 256 PICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDI 315
Query: 275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGV-EMHGSPISLNSIEILKGRSVCGTYFGG 333
D FE G + +R+G G + + + + + G++F
Sbjct: 316 DIVFEHPG-RETFGASVFVTRKG-GTITTCASTSGYMHEYDNRYL-WMSLKRIIGSHFA- 371
Query: 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 378
+ + ++ ++ S D +A +
Sbjct: 372 --NYREAWEANRLIAKGRIHP--TLSKVYSLEDTGQAAYDVHRNL 412
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 5e-23
Identities = 64/387 (16%), Positives = 111/387 (28%), Gaps = 89/387 (22%)
Query: 17 KAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------- 66
+A + G P + ++ +E+ + ++R+K+L + SD+
Sbjct: 28 RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDI--------NMIQGNYG 79
Query: 67 PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGR 126
LP + G+E V V +VG V +K D V+P
Sbjct: 80 LLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA------------------------ 115
Query: 127 GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 186
GT + +V ++++ IPL A L
Sbjct: 116 -----NAGLGT-------------------WRTEAVFSEEALIQVPSDIPLQSAATLGVN 151
Query: 187 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE---- 241
T ++ G +V VG AV + A + I V + +
Sbjct: 152 PCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSD 210
Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGK 300
K G I ++ D C+G + G G
Sbjct: 211 RLKSLGAEHVITEEELRRP---EMKNFFKDMPQPRLALNCVG-GKSSTELLRQLARG-GT 265
Query: 301 TVILGVEMHGSPISLN-SIEILKGRSVCGTYFGG----LKP---RSDIATLAQKYLDKEL 352
V G M P+ + S+ I K + G + P + I TL +L
Sbjct: 266 MVTYGG-MAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQL 324
Query: 353 NLGEFITHEVSFHDINKAFDLLLEGKS 379
+V D A + ++
Sbjct: 325 TA--PACSQVPLQDYQSALEASMKPFI 349
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 7e-21
Identities = 51/410 (12%), Positives = 113/410 (27%), Gaps = 76/410 (18%)
Query: 9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV----------- 57
+A K + K L + E+ + E+ + ++ +S+ ++ V
Sbjct: 31 RAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTF 90
Query: 58 -----TFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRD 112
+ + G + GVV G V K D V+
Sbjct: 91 HFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDE-QEP 149
Query: 113 CKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172
++ G EY VV + ++
Sbjct: 150 ATHGDGMLGTEQRAWGFE--TNFGG-------------------LAEYGVVRASQLLPKP 188
Query: 173 PHIPLGIACLLSCGVSTGVGA--AWKVAGVEVGSTVAIFGLG------AVGLAVAEGARL 224
H+ A + T + + A ++ G V I+G A+ G
Sbjct: 189 AHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGI- 247
Query: 225 NRASKIIGVDINPEKFEIGKKFGITDFIN---------------PATCGDKTVSQVIKEM 269
+ V + +K + G IN + +++++ E
Sbjct: 248 -----PVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEK 302
Query: 270 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328
D FE G + +R G G V G G + ++ + +K + + G
Sbjct: 303 AGREPDIVFEHTG-RVTFGLSVIVARRG-GTVVTCGS-SSGYLHTFDNRYLWMKLKKIVG 359
Query: 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 378
++ + + + + ++ + +A ++ +
Sbjct: 360 SHGA---NHEEQQATNRLFESGAVVP--AMSAVYPLAEAAEACRVVQTSR 404
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366 | Back alignment and structure |
|---|
Score = 87.2 bits (217), Expect = 3e-19
Identities = 87/394 (22%), Positives = 146/394 (37%), Gaps = 71/394 (18%)
Query: 5 SASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST 64
S SP+ ++ R L ++R K+L +CHSD+ K+
Sbjct: 6 SKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKN-- 63
Query: 65 DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK 123
D P++ GHE VG V VG V++V D V + C C C + N C K
Sbjct: 64 DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPK 123
Query: 124 FGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL 182
Y DGT + G ++ + V + ++++ ++PL
Sbjct: 124 MILTY--ASIYHDGTITY----G----------GYSNHMVANERYIIRFPDNMPLDGGAP 167
Query: 183 LSC-GVST-------GVGAAWKVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASK 229
L C G++ G+ G + I GLG AV A A G+ K
Sbjct: 168 LLCAGITVYSPLKYFGLDEP--------GKHIGIVGLGGLGHVAVKFAKAFGS------K 213
Query: 230 IIGVDINPEKF-EIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCFECIGLTSV 286
+ + +P K E K FG F+ VS+ ++M G D + +
Sbjct: 214 VTVISTSPSKKEEALKNFGADSFL---------VSRDQEQMQAAAGTLDGIIDTVSAVHP 264
Query: 287 MNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQK 346
+ F + GK +++G + S+ I + V G+ GG+K + Q+
Sbjct: 265 LLPLFGLLKSH-GKLILVGAPEKPLELPAFSL-IAGRKIVAGSGIGGMK---ET----QE 315
Query: 347 YLD--KELNLGEFITHEVSFHDINKAFDLLLEGK 378
+D + N+ I +S +N A + L +
Sbjct: 316 MIDFAAKHNITADIE-VISTDYLNTAMERLAKND 348
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 8e-19
Identities = 66/408 (16%), Positives = 117/408 (28%), Gaps = 96/408 (23%)
Query: 13 VIRCKAAICRIPGKP---LVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTF-------- 59
+I +A + G+P L + E++ E+ +K L + + SD+
Sbjct: 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60
Query: 60 WKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSN 119
+T G+E + V VG V ++ D V+P
Sbjct: 61 PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSH---------------- 104
Query: 120 TCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
GT + +++ + +K+ P+
Sbjct: 105 -------------VNFGT-------------------WRTHALGNDDDFIKL-PNPAQSK 131
Query: 180 ACLLSCGVSTGVGAAWKV------------AGVEVGSTVAIF--GLGAVGLAVAEGARLN 225
A G++ GA V + G I G AVG ++ +L
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191
Query: 226 RASKIIGV----DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD---GGADYCF 278
I V E K+ G T I + IKE G A
Sbjct: 192 NF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLAL 250
Query: 279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEILKGRSVCGTYFGGL--- 334
C+G G + G M P+++ S+ I K + G + L
Sbjct: 251 NCVG-GKSSTGIARKLNNN-GLMLTYGG-MSFQPVTIPTSLYIFKNFTSAGFWVTELLKN 307
Query: 335 ---KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 379
S + + Y + +L + E + +L +G +
Sbjct: 308 NKELKTSTLNQIIAWYEEGKLTD--AKSIETLYDGTKPLHELYQDGVA 353
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 8e-19
Identities = 54/394 (13%), Positives = 108/394 (27%), Gaps = 88/394 (22%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
A + V ++ +++ ++ SD G
Sbjct: 13 TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFA--TPWAFLG 67
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
+ G V +VG V ++ D V G P P G
Sbjct: 68 TDYAGTVVAVGSDVTHIQVGDRV-------YG---------------AQNEMCPRTPDQG 105
Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH--------IPLGIA----CLLS 184
F++Y+V KI +P GI+ +
Sbjct: 106 A-------------------FSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKL 146
Query: 185 CGVSTGVGAAWKVAGVEVGSTVAIFG-LGAVG-----LAVAEGARLNRASKIIGVDINPE 238
G+ +A + V ++G A + G I +P
Sbjct: 147 LGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYI------PIAT-CSPH 199
Query: 239 KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNS-SREG 297
F++ K G + + ++Q I+ T Y +CI F + R G
Sbjct: 200 NFDLAKSRGAEEVFDYR---APNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG 256
Query: 298 WGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE------ 351
+ H + + + + G ++ G P + ++ ++
Sbjct: 257 GHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAG 316
Query: 352 --LNLGEFITHEV-----SFHDINKAFDLLLEGK 378
+ G + H + F I + +L+ +G+
Sbjct: 317 QLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGE 350
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 1e-18
Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 44/266 (16%)
Query: 1 MNNKSASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW 60
+ + S KAG I+ A +PL +I P +++I+I +CHSD+
Sbjct: 10 LESTSLYKKAGLKIKAVGA--YSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQV 67
Query: 61 KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSN 119
+S + P + GHE VG V +VG+ VE+ DLV + C C +C+ N
Sbjct: 68 RS--EWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLEN 125
Query: 120 TCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH--IP 176
C Y N P D G +++ VV +V++I H
Sbjct: 126 YCDHMTGTY--NSPTPDEPGH---TLG----------GYSQQIVVHERYVLRI-RHPQEQ 169
Query: 177 LGIACLLSC-GVSTGVGAAW---KVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRA 227
L L C G++T + + G V + G+G + LA A GA
Sbjct: 170 LAAVAPLLCAGITT-----YSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA----- 219
Query: 228 SKIIGVDINPEKFEIGKKFGITDFIN 253
++ + K E K G + +N
Sbjct: 220 -HVVAFTTSEAKREAAKALGADEVVN 244
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 6e-18
Identities = 79/370 (21%), Positives = 131/370 (35%), Gaps = 63/370 (17%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
+ + ++ I IL +CHSD+ S + + P+I GHE G++
Sbjct: 13 KDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYS--EWKEGIYPMIPGHEIAGII 70
Query: 84 ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 142
+ VG+ V++ K D+V + F C C+ CK + C+K Y
Sbjct: 71 KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTY--------DCLDSF 122
Query: 143 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVST-------GVGAA 194
+ ++ VVD +V+ + + PL L C G++T V
Sbjct: 123 HDNEPHM-----GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTKG 177
Query: 195 WKVAGVEVGSTVAIFGLG--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252
KV G GLG AV AVA GA ++ N K + G+ F
Sbjct: 178 TKVGVAGFG------GLGSMAVKYAVAMGA------EVSVFARNEHKKQDALSMGVKHFY 225
Query: 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312
K+ D+ I + D G ++G+
Sbjct: 226 TDP-----------KQCK-EELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVA 272
Query: 313 ISLNSIEIL--KGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDIN 368
L+ + + R V G+ GG+K + Q+ +D + N+ I + DI+
Sbjct: 273 PVLSVFDFIHLGNRKVYGSLIGGIK---ET----QEMVDFSIKHNIYPEID-LILGKDID 324
Query: 369 KAFDLLLEGK 378
A+ L GK
Sbjct: 325 TAYHNLTHGK 334
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 1e-16
Identities = 79/372 (21%), Positives = 137/372 (36%), Gaps = 65/372 (17%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
P L + ++ I+I+C +CH+D+ K+ DL P++ GHE VG V
Sbjct: 18 PSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKN--DLGMSNYPMVPGHEVVGEV 75
Query: 84 ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFR 141
VG V + D+V + CG C C+ C K Y N +G
Sbjct: 76 VEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSY--NDVYINGQPTQ- 132
Query: 142 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA-----AWK 196
G F + +VV VVKI + + A L C GV +
Sbjct: 133 ---G----------GFAKATVVHQKFVVKIPEGMAVEQAAPLLCA---GVTVYSPLSHFG 176
Query: 197 VAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGITD 250
+ G I GLG V +A A G + + + +K E + G D
Sbjct: 177 LKQ--PGLRGGILGLGGVGHMGVKIAKAMGH------HVTVISSSNKKREEALQDLGADD 228
Query: 251 FINPATCGDKTVSQVIKEMTD--GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
++ + +M++ DY + + + + + + GK +++GV
Sbjct: 229 YV---------IGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVIN 278
Query: 309 HGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHD 366
+ + +L + + G++ G +K + ++ L+ KE L I V
Sbjct: 279 NPLQFLTPLL-MLGRKVITGSFIGSMK---ET----EEMLEFCKEKGLSSII-EVVKMDY 329
Query: 367 INKAFDLLLEGK 378
+N AF+ L +
Sbjct: 330 VNTAFERLEKND 341
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 1e-16
Identities = 68/379 (17%), Positives = 120/379 (31%), Gaps = 80/379 (21%)
Query: 17 KAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
K G P L +E +EP K E+ +++L + SD+ + ++PLP
Sbjct: 6 KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIP-ITGAYAHRIPLPN 64
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
I G+E VG+VE+VG +V VLP
Sbjct: 65 IPGYEGVGIVENVGAFVSRELIGKRVLP-------------------------------- 92
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
++ EY VV I I A + T
Sbjct: 93 -----------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVT 135
Query: 194 AWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
+ ++ + + G L+ RL I V N + E + G
Sbjct: 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRL------IAVTRNNKHTEELLRLG 189
Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
I+ +T + + + E+T+G GAD + IG N+ S R G + +G+
Sbjct: 190 AAYVIDTST-AP--LYETVMELTNGIGADAAIDSIGGPDG-NELAFSLRPN-GHFLTIGL 244
Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNL---GEF----IT 359
+ G ++ I + K + + Q+ + L + +
Sbjct: 245 -LSGIQVNWAEI-VTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVH 302
Query: 360 HEVSFHDINKAFDLLLEGK 378
D+ A D++ +
Sbjct: 303 STYELADVKAAVDVVQSAE 321
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 1e-15
Identities = 79/375 (21%), Positives = 135/375 (36%), Gaps = 67/375 (17%)
Query: 24 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 83
K + + +P +I IKI +C SD+ + +P++ GHE VG V
Sbjct: 17 DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAG--HWGNMKMPLVVGHEIVGKV 74
Query: 84 ESVGEYVE-EVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRF 140
+G +K V + C EC CK+ C+KF Y + P DG
Sbjct: 75 VKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTY--SQPYEDGYVSQ 132
Query: 141 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVST-------GVG 192
G + Y V VV I +IP +A L C G++ G G
Sbjct: 133 ----G----------GYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCG 178
Query: 193 AAWKVAGVEVGSTVAIFGLG--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250
KV V +G G+G ++ A GA + + + K E K G
Sbjct: 179 PGKKVGIVGLG------GIGSMGTLISKAMGA------ETYVISRSSRKREDAMKMGADH 226
Query: 251 FINPATCGDKTVSQVIKEMTDGGA---DYCFECI-GLTSVMNDAFNSSREGWGKTVILGV 306
+I + + + D C LT + + + + G+ V + +
Sbjct: 227 YI---------ATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISI 277
Query: 307 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFI-THEVS 363
+SL LK S+ + G +K ++ + L E ++ ++ T V
Sbjct: 278 PEQHEMLSLKPY-GLKAVSISYSALGSIK---EL----NQLLKLVSEKDIKIWVETLPVG 329
Query: 364 FHDINKAFDLLLEGK 378
+++AF+ + +G
Sbjct: 330 EAGVHEAFERMEKGD 344
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 1e-14
Identities = 72/384 (18%), Positives = 126/384 (32%), Gaps = 93/384 (24%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------P 67
KA + P LV ++E + + + +C D L
Sbjct: 23 KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY--------LMTKGEYQL 74
Query: 68 KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG 127
K+ P + G E GVV S E G G
Sbjct: 75 KMEPPFVPGIETAGVVRSAPE------------------------------------GSG 98
Query: 128 YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187
+P GD + F I + E V ++++ P + A L
Sbjct: 99 IKP--------------GDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANY 144
Query: 188 STGVGAAWKVAGVEVGSTVAIF------GLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
T A + + G TV + G A+ +A GA+ +I V E
Sbjct: 145 HTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAK------VIAVVNRTAATE 198
Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGK 300
K G + ++ ++ ++E T G G D + IG +DA + G+
Sbjct: 199 FVKSVGADIVLP----LEEGWAKAVREATGGAGVDMVVDPIG-GPAFDDAVRTLASE-GR 252
Query: 301 TVILGVEMHGS--PISLNSIEILKGRSVCGTYFGG-LKPRSDIATLAQKYLDKELNLG-- 355
+++G G I +N + +L+ S+ G +G L+ +D Q L+K + G
Sbjct: 253 LLVVGF-AAGGIPTIKVNRL-LLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMR 310
Query: 356 EFITHEVSFHDINKAFDLLLEGKS 379
++ + + +A +GK
Sbjct: 311 PPVSARIPLSEGRQALQDFADGKV 334
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 8e-13
Identities = 49/345 (14%), Positives = 93/345 (26%), Gaps = 94/345 (27%)
Query: 17 KAAICRIPGKP--------------LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS 62
KA + G L I V P ++ IK+ S+ SDV F K
Sbjct: 12 KALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKG 71
Query: 63 STDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCS 122
P+ G E VG + + G+
Sbjct: 72 QYGQPR-VKGRPAGFEGVGTIVAGGD---------------------------------- 96
Query: 123 KFGRGYRPNMPRDGTSRFRELKGDVIHHFLNIS---SFTEYSVVDITHVVKITPHIPLGI 179
+ ++ G + +S S+ EY+V + + + +
Sbjct: 97 ------------EPYAKSL--VGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDED 142
Query: 180 ACLLSCGVSTGVGAAW---KVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKI 230
+ T A + E + +GLA EG R
Sbjct: 143 GAAMIVNPLT----AIAMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGFR------P 192
Query: 231 IGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMND 289
I E+ + K G +N D ++E+ + + + +
Sbjct: 193 IVTVRRDEQIALLKDIGAAHVLNEKA-PD--FEATLREVMKAEQPRIFLDAVT-GPLASA 248
Query: 290 AFNSSREGWGKTVILGVEMHGSPISLNSIE--ILKGRSVCGTYFG 332
FN+ + + +I G + + I + + + G +
Sbjct: 249 IFNAMPKR-ARWIIYGR-LDPDATVIREPGQLIFQHKHIEGFWLS 291
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 1e-11
Identities = 56/401 (13%), Positives = 118/401 (29%), Gaps = 109/401 (27%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------P 67
+A + G L + + P+ E++I++ L D+ +
Sbjct: 5 RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDL--------MVRQGNIDN 56
Query: 68 KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG 127
P++ G E G+VE++G+ V+ + D V
Sbjct: 57 PPKTPLVPGFECSGIVEALGDSVKGYEIGDRV-------MAFVN-------------YNA 96
Query: 128 YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187
+ E + V KI + A
Sbjct: 97 W-----------------------------AEVVCTPVEFVYKIPDDMSFSEAAAFPMNF 127
Query: 188 STGVGAAW----KVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242
T A+ +VA + G +V + G VG AVA+ + G + K E
Sbjct: 128 VT----AYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEA 182
Query: 243 GKKFGITDFINPATCGDKTV--SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
K + D+ Q +K ++ G D +C+ + + G
Sbjct: 183 IKDSV--THLF-----DRNADYVQEVKRISAEGVDIVLDCLC-GDNTGKGLSLLKPL-GT 233
Query: 301 TVILGV---------------EMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLA 344
++ G + +N I++ + + + G L + A L
Sbjct: 234 YILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLI 293
Query: 345 QKYLDKELNL---GEF---ITHEVSFHDINKAFDLLLEGKS 379
+ ++K + L + + + ++ +A + + +
Sbjct: 294 RGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGN 334
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 1e-11
Identities = 46/276 (16%), Positives = 79/276 (28%), Gaps = 70/276 (25%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
G P L E P EI+++ + D P LP
Sbjct: 3 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPS--G 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
G EA G+V VG V+ +K
Sbjct: 61 LGTEAAGIVSKVGSGVKHIKA--------------------------------------- 81
Query: 135 DGTSRFRELKGD-VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLLSCGVSTGV 191
GD V++ + +++ + + I A L G+
Sbjct: 82 ----------GDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLK-----GL 126
Query: 192 GA---AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
K ++ G VGL + A+ +K+IG +K + K G
Sbjct: 127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKA-LGAKLIGTVGTAQKAQSALKAG 185
Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
IN ++ + + +KE+T G ++ +G
Sbjct: 186 AWQVIN---YREEDLVERLKEITGGKKVRVVYDSVG 218
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 2e-11
Identities = 54/279 (19%), Positives = 89/279 (31%), Gaps = 71/279 (25%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPV 73
AA+ G P V EE++V P ++R++ + D L P+
Sbjct: 3 MAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
+ G EA VVE VG V +
Sbjct: 63 VVGFEAAAVVEEVGPGVTDFTV-------------------------------------- 84
Query: 134 RDGTSRFRELKGD-VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVS--TG 190
G+ V + ++++ + ++K+ + L L + T
Sbjct: 85 -----------GERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTA 133
Query: 191 VGAAWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244
+ V+ G V I G V A GA +IG EK E +
Sbjct: 134 QYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT------VIGTVSTEEKAETAR 187
Query: 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
K G IN + ++V++E+T G G D ++ IG
Sbjct: 188 KLGCHHTIN---YSTQDFAEVVREITGGKGVDVVYDSIG 223
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 2e-11
Identities = 52/274 (18%), Positives = 94/274 (34%), Gaps = 65/274 (23%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
K + G + E+ V E+ IK T + + + F + P +
Sbjct: 10 KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF---RKGIYPCEKPYV 66
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
G EA G V + G+ V + D V Y
Sbjct: 67 LGREASGTVVAKGKGVTNFEVGDQV---------------------------AY------ 93
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVV-DITHVVKITPHIPLGIACLLSCGVSTGVGA 193
++ S+F +YS + V+K+ L + G+ + A
Sbjct: 94 -----------------ISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTA 136
Query: 194 ---AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
+ V+ G V +F G VGL + + ++ + + I V EK +I K++G
Sbjct: 137 LSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKM-KGAHTIAVASTDEKLKIAKEYGAE 195
Query: 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
IN + + + + + T+G G D F+ +G
Sbjct: 196 YLIN---ASKEDILRQVLKFTNGKGVDASFDSVG 226
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 3e-11
Identities = 55/282 (19%), Positives = 91/282 (32%), Gaps = 82/282 (29%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPV 73
K G P L + E E P + ++ L D + + L P LP
Sbjct: 3 KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYY---RSGLYPAPFLPS 59
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
G E GVVE+VG+ V K
Sbjct: 60 GLGAEGAGVVEAVGDEVTRFKV-------------------------------------- 81
Query: 134 RDGTSRFRELKGD-VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLLSCGVSTG 190
GD V + + +++E V+ ++VK+ + A +L G
Sbjct: 82 -----------GDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLK-----G 125
Query: 191 VGA---AWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241
+ + V+ G + G A A A GA+ +IG +PEK
Sbjct: 126 LTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK------LIGTVSSPEKAA 179
Query: 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
K G + I+ + V++ + E+TDG ++ +G
Sbjct: 180 HAKALGAWETID---YSHEDVAKRVLELTDGKKCPVVYDGVG 218
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 6e-10
Identities = 66/375 (17%), Positives = 118/375 (31%), Gaps = 79/375 (21%)
Query: 17 KAAICRIPGKP--LVIE-EIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
+A G P L + +I V PK ++ IK+ + + +S T K LP
Sbjct: 31 RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYI-RSGTYSRKPLLPY 89
Query: 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 133
G + GV+E+VG+ K+ D V S G
Sbjct: 90 TPGSDVAGVIEAVGDNASAFKKGDRVF--------------------TSSTISG------ 123
Query: 134 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 193
+ EY++ V K+ + + T A
Sbjct: 124 ----------------------GYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRA 161
Query: 194 AWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247
A V+ G +V + GL A +A A G + I+G E +I + G
Sbjct: 162 LIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK------ILGTAGTEEGQKIVLQNG 215
Query: 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306
+ N IK+ G D E + ++ + G G+ +++G
Sbjct: 216 AHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLA-NVNLSKDLSLLSHG-GRVIVVGS 270
Query: 307 EMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEF---ITHEV 362
I +N + + K S+ G + + A + +G I +
Sbjct: 271 ---RGTIEINPRDTMAKESSIIGV-TLFSSTKEEFQQYAAALQAG-MEIGWLKPVIGSQY 325
Query: 363 SFHDINKAFDLLLEG 377
+ +A + ++ G
Sbjct: 326 PLEKVAEAHENIIHG 340
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 1e-09
Identities = 36/253 (14%), Positives = 68/253 (26%), Gaps = 80/253 (31%)
Query: 17 KAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLP 72
+ + + +++ A +I ++ + D WK +
Sbjct: 3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVD---WKFIKANPINWSNG 59
Query: 73 VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 132
+ G + GV+ VG V+ V Y ++
Sbjct: 60 HVPGVDGAGVIVKVGAKVDSKMLGRRVA---------------------------YHTSL 92
Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI----ACLLSCGVS 188
R G+ F E++V++ V+ +P + A L C +
Sbjct: 93 KRHGS-------------------FAEFTVLNTDRVM----TLPDNLSFERAAALPCPLL 129
Query: 189 TGVGAAW---KVAGVEVGSTVAIFGLGAVG-----LAVAEGARLNRASKIIGVDINPEKF 240
T AW + + V I G GAV + G + V
Sbjct: 130 T----AWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYV------VDLVS-ASLSQ 178
Query: 241 EIGKKFGITDFIN 253
+ K G+
Sbjct: 179 ALAAKRGVRHLYR 191
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 5e-09
Identities = 42/273 (15%), Positives = 84/273 (30%), Gaps = 64/273 (23%)
Query: 17 KAAICRIPGKP-----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL 71
+ + + + V P ++ ++ + SD+ + + P +
Sbjct: 25 QKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDI-NYSAGRYDPSVKP 83
Query: 72 PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
P G E +G V ++G
Sbjct: 84 PFDIGFEGIGEVVALGLSA----------------------------------------- 102
Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG-VSTG 190
++R+ G + ++ SF EY+VV + + P + L+S
Sbjct: 103 -----SARYTV--GQAV-AYMAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYIS 154
Query: 191 VGAAWKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249
+ ++ G+ G V + G G + ++ + +IG + EK K G
Sbjct: 155 LK---ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCD 210
Query: 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282
IN V V+K+ G D +E +G
Sbjct: 211 RPIN-YKTEP--VGTVLKQEYPEGVDVVYESVG 240
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 56.1 bits (135), Expect = 6e-09
Identities = 53/412 (12%), Positives = 104/412 (25%), Gaps = 120/412 (29%)
Query: 24 PGKPLV--IEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP----------- 70
L ++ I+ P E+ I+I + L SD+ + D+
Sbjct: 14 SSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVT 73
Query: 71 ----------------LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCK 114
+ G+E GVV G
Sbjct: 74 ARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKT--------------- 118
Query: 115 SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174
+ G +++Y + + +
Sbjct: 119 ------VAAIGGA----------------------------MYSQYRCIPADQCLVLPEG 144
Query: 175 IPLGI-ACLLSCGVSTGVGAAW---KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASK 229
A ++ A + +E S + +G + + + K
Sbjct: 145 ATPADGASSFVNPLT-----ALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-K 198
Query: 230 IIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG------ 282
++ + E+ ++ K G N + + E GA F+ G
Sbjct: 199 LVNIVRKQEQADLLKAQGAVHVCN--AASPTFMQDL-TEALVSTGATIAFDATGGGKLGG 255
Query: 283 -LTSVMNDAFNSSREGW-------GKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 334
+ + M A N S + K V L + SP N + G L
Sbjct: 256 QILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRN-FGMAWGMGGWL---L 311
Query: 335 KPRS-----DIATLAQKYLDKELNLGEF---ITHEVSFHDINKAFDLLLEGK 378
P + A ++ + EL F + E+S ++ + + K
Sbjct: 312 FPFLQKIGRERANALKQRVVAELK-TTFASHYSKEISLAEVLDLDMIAVYNK 362
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 7e-09
Identities = 40/221 (18%), Positives = 60/221 (27%), Gaps = 63/221 (28%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP---KLPL 71
KA G P L + + + ++ IK+ SL D S + K L
Sbjct: 8 KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67
Query: 72 PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN 131
P G++ G V +G V V D V G
Sbjct: 68 PSGLGYDFSGEVIELGSDVNNVNIGDKV------------------------MG---IAG 100
Query: 132 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGV 191
P + EY ++ ++ L + + T
Sbjct: 101 FPDHP------------------CCYAEYVCASPDTII----QKLEKLSFLQAASLPTAG 138
Query: 192 GAAWKV---AGVEVGSTVAIFG-LGAVG-----LAVAEGAR 223
A + A V+ G V I G VG LA +G
Sbjct: 139 LTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTT 179
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 2e-08
Identities = 50/277 (18%), Positives = 85/277 (30%), Gaps = 71/277 (25%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
AA+ P V+ ++ P ++ ++I + D + PLP I G
Sbjct: 9 IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILG 68
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
+ G V +VG V+ + D V G +
Sbjct: 69 MDLAGTVVAVGPEVDSFRVGDAV-------FG-----------------------LTGG- 97
Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW- 195
L+G + +++ VD + P + + + AW
Sbjct: 98 ---VGGLQG----------THAQFAAVDARLLA----SKPAALTMRQASVLPLVFITAWE 140
Query: 196 ---KVAGVEVGSTVAIF----GLG--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246
A V+ G TV I G+G A+ +A+A GAR + E +
Sbjct: 141 GLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGAR------VFATA-RGSDLEYVRDL 193
Query: 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282
G T + E T G G D ++ +G
Sbjct: 194 GATPIDA-----SREPEDYAAEHTAGQGFDLVYDTLG 225
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 72/380 (18%), Positives = 121/380 (31%), Gaps = 83/380 (21%)
Query: 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
+ + G P +VI + + E+ ++ + D+ + S PK I
Sbjct: 30 RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPK-DASPI 88
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
G E G + VG
Sbjct: 89 LGLELSGEIVGVG----------------------------------------------- 101
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
G S + GD + N ++ EY ++ ++ A L T
Sbjct: 102 PGVSGYAV--GDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANL 159
Query: 195 WKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248
+++AG+ G +V I G A+ LA A GA + + K E ++ G
Sbjct: 160 FQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAE------VYATAGSTGKCEACERLGA 213
Query: 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308
IN + + VIK T G D + IG + S + G I+ +
Sbjct: 214 KRGIN---YRSEDFAAVIKAETGQGVDIILDMIG-AAYFERNIASLAKD-GCLSIIAF-L 267
Query: 309 HGS-PISLNSIEILKGR-SVCGTYFGGLKPRSDI--ATLAQKYLDKELNL---GEF---I 358
G+ +N I+ R +V G+ ++PR+ + L + L G I
Sbjct: 268 GGAVAEKVNLSPIMVKRLTVTGST---MRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVI 324
Query: 359 THEVSFHDINKAFDLLLEGK 378
+F D+ A LL EG
Sbjct: 325 HKVFAFEDVADAHRLLEEGS 344
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 47/291 (16%), Positives = 83/291 (28%), Gaps = 73/291 (25%)
Query: 17 KAAICRIPGK---PLVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTFWKS-STDLPKLP 70
KA P + +IE+ P +I +++ S+ D +K + P
Sbjct: 24 KAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVD---YKVRRSTPPDGT 80
Query: 71 LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
+ G++A G+V +VG V + D V Y
Sbjct: 81 DWKVIGYDAAGIVSAVGPDVTLFRPGDEVF---------------------------YAG 113
Query: 131 NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
++ R G + E+ +VD +I P + + +
Sbjct: 114 SIIRPG-------------------TNAEFHLVD----ERIVGRKPKTLDWAEAAALPLT 150
Query: 191 VGAAW---------KVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKF 240
AW + I G G VG + AR +I PE
Sbjct: 151 SITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ 210
Query: 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAF 291
E K G I+ + K ++ + + G + F +
Sbjct: 211 EWVKSLGAHHVIDHS----KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIA 257
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 6e-05
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 15/75 (20%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------PKL 69
KA + + G PL + ++ + E+ +++ L +D L +L
Sbjct: 2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADH--------LMRLGAYLTRL 53
Query: 70 PLPVIFGHEAVGVVE 84
P I G E VGVVE
Sbjct: 54 HPPFIPGMEVVGVVE 68
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 6e-05
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 13/71 (18%)
Query: 186 GVSTGVGAAWKVAGVEV--GSTVAIFGLGAVGLAVA-----EGARLNRASKIIGVDINPE 238
GV + A G+ G TV + GLGAVG ++A GA +++ D + E
Sbjct: 156 GVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGA------QLLVADTDTE 209
Query: 239 KFEIGKKFGIT 249
+ G T
Sbjct: 210 RVAHAVALGHT 220
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 17 KAAICRIPGK-----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL 71
KA P K +++ PK EI +KI S+ D K
Sbjct: 4 KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVD---TKQRLMDVS-KA 59
Query: 72 PVIFGHEAVGVVESVGEYVEEVKERDLV 99
P + G +A+GVVESVG V + D+V
Sbjct: 60 PRVLGFDAIGVVESVGNEVTMFNQGDIV 87
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 6e-04
Identities = 55/319 (17%), Positives = 90/319 (28%), Gaps = 96/319 (30%)
Query: 17 KAAICRIPGKPLVIEEIEV----EPPKAWEIRIKILCTSLCHSDV-------------TF 59
A + GK V+ + E+ +K+ S+ DV
Sbjct: 23 MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82
Query: 60 WKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSN 119
+ P+ G + GVV G V+ K D V
Sbjct: 83 DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV-------------------- 122
Query: 120 TCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179
+ + GT +E+ VV V H P +
Sbjct: 123 ----WA---AVPPWKQGT-------------------LSEFVVVSGNEVS----HKPKSL 152
Query: 180 ACLLSCGVSTGVGAAW----KVAGVEV----GSTVAIFG-LGAVG-----LAVAEGARLN 225
+ + AW KV G+ G V I G G VG + A A
Sbjct: 153 THTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAH-- 210
Query: 226 RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA-DYCFECIGLT 284
+ V + + E+ +K G D I D V +++ D+ + +G
Sbjct: 211 ----VTAVC-SQDASELVRKLGADDVI------DYKSGSVEEQLKSLKPFDFILDNVG-G 258
Query: 285 SVMNDAFNSSREGWGKTVI 303
S A + ++ G T +
Sbjct: 259 STETWAPDFLKKWSGATYV 277
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Length = 144 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 7e-04
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 205 TVAIFGLGAVGLAVAEGARLNRASK-IIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 263
A+ GLG G ++ + L+R ++ VDIN EK + A + T
Sbjct: 8 QFAVIGLGRFGGSIVK--ELHRMGHEVLAVDINEEKVN-----AYASYATHAVIANATEE 60
Query: 264 QVIKEMTDGGADYCFECIG 282
+ + +Y IG
Sbjct: 61 NELLSLGIRNFEYVIVAIG 79
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 390 | |||
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.89 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 99.12 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.93 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.76 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.6 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.54 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.51 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.4 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.37 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.06 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.05 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.04 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 98.02 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.01 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 97.96 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.91 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 97.88 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.85 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.82 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.77 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.72 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.68 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.63 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.61 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.58 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 97.57 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.57 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 97.56 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.55 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.54 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 97.54 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.5 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.44 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.43 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 97.38 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 97.37 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 97.36 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 97.36 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.35 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 97.33 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 97.33 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.3 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.29 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 97.26 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 97.25 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.18 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.17 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 97.14 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 97.14 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.14 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 97.14 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 97.12 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.12 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 97.11 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 97.11 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.1 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 97.09 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.07 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 97.07 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 97.07 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 97.06 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 97.05 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 97.04 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 97.04 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.04 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 97.04 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 97.03 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 97.02 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.01 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 97.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 96.99 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 96.99 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 96.99 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 96.98 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.98 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 96.97 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 96.95 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 96.94 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 96.94 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 96.93 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 96.93 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 96.9 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 96.89 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 96.88 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 96.88 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 96.88 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.87 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 96.86 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 96.85 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 96.83 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 96.83 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 96.83 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 96.82 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 96.82 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 96.82 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 96.81 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 96.81 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 96.81 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 96.81 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 96.81 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 96.81 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 96.81 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 96.8 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 96.8 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 96.8 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 96.8 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 96.79 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 96.79 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 96.79 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 96.78 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 96.76 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 96.76 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 96.76 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 96.75 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 96.75 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 96.74 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.74 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 96.74 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 96.74 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 96.74 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 96.73 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 96.73 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.73 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 96.73 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 96.73 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 96.73 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 96.72 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 96.72 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 96.72 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 96.72 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 96.72 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 96.7 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 96.7 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.7 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 96.69 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 96.69 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 96.68 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 96.68 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 96.68 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 96.67 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 96.67 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 96.67 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 96.66 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 96.66 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 96.66 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.65 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.65 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.65 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 96.65 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 96.64 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 96.64 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 96.64 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 96.63 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 96.63 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.62 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 96.61 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 96.61 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 96.61 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 96.61 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 96.61 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 96.6 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 96.59 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 96.59 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 96.58 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 96.58 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 96.58 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 96.57 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 96.57 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 96.57 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 96.57 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 96.56 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 96.56 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.55 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 96.55 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 96.54 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 96.53 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 96.52 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 96.52 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 96.51 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 96.51 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 96.51 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 96.51 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 96.51 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 96.5 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.5 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 96.49 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 96.49 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 96.48 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 96.47 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 96.47 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 96.47 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 96.46 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 96.45 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.45 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 96.45 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 96.44 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 96.43 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 96.43 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.42 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.42 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 96.42 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 96.41 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.41 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.4 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 96.4 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 96.4 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.4 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 96.39 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 96.38 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 96.38 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.38 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 96.37 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 96.37 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 96.37 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 96.36 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.36 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 96.36 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 96.35 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.35 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 96.35 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 96.35 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.34 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 96.34 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.34 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 96.33 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 96.33 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 96.33 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 96.33 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 96.32 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 96.32 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.32 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.31 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.3 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 96.29 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 96.29 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 96.29 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 96.29 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.28 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 96.27 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.27 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 96.26 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 96.26 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 96.26 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 96.25 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 96.23 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 96.22 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 96.21 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.21 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 96.21 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 96.2 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 96.2 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.2 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 96.18 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 96.17 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 96.17 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.17 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 96.17 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 96.17 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 96.16 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 96.16 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 96.15 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 96.15 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.15 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 96.14 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 96.13 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.13 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 96.13 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 96.12 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 96.11 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 96.11 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 96.1 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 96.09 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 96.08 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 96.07 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 96.06 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 96.06 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 96.06 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.06 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 96.06 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 96.06 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 96.05 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 96.05 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 96.04 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 96.04 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 96.04 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 96.04 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 96.02 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 96.01 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 95.97 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 95.97 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 95.96 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 95.94 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 95.94 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 95.93 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 95.93 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 95.92 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 95.92 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 95.92 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 95.91 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 95.9 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 95.89 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 95.89 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 95.88 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 95.88 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 95.88 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 95.88 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 95.85 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 95.84 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 95.84 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 95.82 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 95.81 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 95.81 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 95.8 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 95.8 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 95.8 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 95.79 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 95.78 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 95.78 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.77 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 95.76 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 95.73 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 95.7 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 95.7 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 95.69 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 95.68 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 95.68 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 95.66 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 95.65 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 95.65 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 95.64 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 95.64 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 95.63 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 95.61 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 95.61 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 95.59 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 95.59 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 95.58 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 95.57 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 95.56 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 95.56 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 95.53 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 95.53 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 95.53 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 95.51 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 95.51 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 95.5 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 95.5 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 95.49 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 95.49 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 95.48 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 95.48 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 95.47 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 95.46 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 95.46 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 95.45 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 95.45 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 95.45 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 95.44 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 95.44 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 95.43 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 95.43 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 95.41 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 95.37 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 95.37 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 95.35 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 95.35 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 95.35 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 95.34 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 95.34 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 95.33 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 95.32 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 95.32 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 95.32 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 95.31 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 95.3 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 95.29 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 95.27 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 95.24 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 95.24 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 95.22 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 95.22 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 95.21 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 95.19 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 95.17 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 95.17 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 95.17 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 95.16 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 95.13 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 95.12 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 95.12 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 95.12 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 95.11 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 95.09 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 95.09 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 95.09 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 95.05 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 95.05 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 95.01 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 95.0 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 94.99 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 94.99 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 94.98 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 94.98 | |
| 4had_A | 350 | Probable oxidoreductase protein; structural genomi | 94.97 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 94.94 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 94.94 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 94.93 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 94.92 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 94.86 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 94.84 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 94.84 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 94.83 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 94.82 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 94.81 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 94.8 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 94.79 | |
| 4fb5_A | 393 | Probable oxidoreductase protein; PSI-biology, nysg | 94.79 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 94.79 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 94.78 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 94.77 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 94.77 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 94.76 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 94.76 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 94.72 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 94.71 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 94.71 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 94.69 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 94.69 |
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-64 Score=484.05 Aligned_cols=376 Identities=50% Similarity=0.894 Sum_probs=330.7
Q ss_pred CCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 9 ~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
+..+|+||||+++++++++++++++|.|+|++|||||||++++||++|+++++|..+.. .+|.++|||++|+|+++|+
T Consensus 2 ~~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~ 79 (378)
T 3uko_A 2 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEG--LFPCILGHEAAGIVESVGE 79 (378)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTC--CSSBCCCCEEEEEEEEECT
T ss_pred CcccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCC--CCCccCCccceEEEEEeCC
Confidence 34689999999999999889999999999999999999999999999999999986655 7899999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCC-CCCCcccccccCceeeccccccccceeEEeeCCc
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (390)
+|++|++||||++.+..+|+.|.+|++++++.|.+.......|.. .+|..++ ...|...++.++.|+|+||++++++.
T Consensus 80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~~~~ 158 (378)
T 3uko_A 80 GVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVS 158 (378)
T ss_dssp TCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSE-EETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred CCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCcccc-ccCCcccccccCCcceEeEEEechhh
Confidence 999999999999999999999999999999999986442223322 2232222 12344555566678999999999999
Q ss_pred eEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 168 v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
++++|+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|
T Consensus 159 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lG 238 (378)
T 3uko_A 159 VAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFG 238 (378)
T ss_dssp EEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTT
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcC
Confidence 99999999999999999999999999888899999999999999999999999999999978999999999999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEE
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVC 327 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 327 (390)
+++++++.+ .+.++.+.+++++++++|+||||+|++..++.+++++++++|+++.+|.......+++++..+.+++++.
T Consensus 239 a~~vi~~~~-~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~ 317 (378)
T 3uko_A 239 VNEFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWK 317 (378)
T ss_dssp CCEEECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEE
T ss_pred CcEEEcccc-CchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEE
Confidence 999998862 1268999999999889999999999987799999999983299999997665556677777666799999
Q ss_pred eeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecCC
Q 016363 328 GTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK 388 (390)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~~ 388 (390)
|+.++.....++++++++++.++++++.++++++|+|+++++||+.+.+++..|+||++++
T Consensus 318 g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi~~~~ 378 (378)
T 3uko_A 318 GTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTSK 378 (378)
T ss_dssp ECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEEETTC
T ss_pred EEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEEecCC
Confidence 9987766667889999999999999999999999999999999999988887799999875
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-60 Score=455.90 Aligned_cols=372 Identities=45% Similarity=0.766 Sum_probs=313.2
Q ss_pred CCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 9 ~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
+...|++|||+++++++++++++++|.|+|++|||+|||.+++||++|++++.|..+. .+|.++|||++|+|+++|+
T Consensus 2 ~~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~P~v~GhE~~G~V~~vG~ 78 (374)
T 2jhf_A 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGE 78 (374)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---CSSBCCCCSEEEEEEEECT
T ss_pred CCCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC---CCCcccCcCceEEEEEECC
Confidence 3467999999999999877999999999999999999999999999999999886542 3799999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
+|++|++||||++.+..+|+.|.+|++++++.|.+.....+.|+..+|..++ ...|...+++...|+|+||+++|++.+
T Consensus 79 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~~~~~ 157 (374)
T 2jhf_A 79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISV 157 (374)
T ss_dssp TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSE-EETTEEEBCSTTTCCSBSEEEEEGGGE
T ss_pred CCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccc-cccccccccccCCccCeeEEEEchHHe
Confidence 9999999999999999999999999999999999764322223322221110 011222223333479999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~ 248 (390)
+++|+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+
T Consensus 158 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa 237 (374)
T 2jhf_A 158 AKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA 237 (374)
T ss_dssp EECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC
T ss_pred EECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence 99999999999999999999999998788999999999999999999999999999998789999999999999999999
Q ss_pred cEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEE
Q 016363 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVC 327 (390)
Q Consensus 249 ~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~ 327 (390)
++++++.+ .+.++.+.+++++++++|+|||++|....++.+++++++++|+++.+|........++++..+.. + ++.
T Consensus 238 ~~vi~~~~-~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~ 315 (374)
T 2jhf_A 238 TECVNPQD-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWK 315 (374)
T ss_dssp SEEECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEE
T ss_pred ceEecccc-cchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEE
Confidence 99998753 11468888988887799999999999776899999999743899999976543345566555554 6 999
Q ss_pred eeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 328 GTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
|+.++.+...++++++++++++|++++.++++++|+|+++++|++.+.++...|+++++
T Consensus 316 g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~ 374 (374)
T 2jhf_A 316 GAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 374 (374)
T ss_dssp ECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred EeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence 98765444457899999999999999888899999999999999999888767999875
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-60 Score=455.68 Aligned_cols=368 Identities=43% Similarity=0.737 Sum_probs=310.4
Q ss_pred CccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 11 ~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
..|++|||+++++++++++++++|.|+|++|||||||++++||++|+++++|..+ . .+|.++|||++|+|+++|++|
T Consensus 5 ~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~--~~P~v~GhE~~G~V~~vG~~v 81 (373)
T 1p0f_A 5 GKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-S--KFPVILGHEAVGVVESIGAGV 81 (373)
T ss_dssp TSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-C--CSSBCCCCCEEEEEEEECTTC
T ss_pred CCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-C--CCCcccCcCceEEEEEECCCC
Confidence 4789999999999987799999999999999999999999999999999998765 3 689999999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
++|++||||++.+..+|+.|.+|++++++.|.+.....+.|+..+|..++ ...|...++....|+|+||+++|++.+++
T Consensus 82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 160 (373)
T 1p0f_A 82 TCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRF-TCRGKPIYNLMGTSTFTEYTVVADIAVAK 160 (373)
T ss_dssp CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSE-EETTEEEBCSTTTCCSBSEEEEETTSEEE
T ss_pred CccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCcccc-ccCCcccccccCCccceeEEEEchhhEEE
Confidence 99999999999999999999999999999998764322223322221100 01122222223347999999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|++++++ ||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++
T Consensus 161 iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~ 239 (373)
T 1p0f_A 161 IDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239 (373)
T ss_dssp ECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred CCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence 99999999 99999999999999878899999999999999999999999999999878999999999999999999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~ 329 (390)
++++.+ .+.++.+.+++++++++|+|||++|....++.+++++++++|+++.+|........++++..+.. + ++.|+
T Consensus 240 vi~~~~-~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~ 317 (373)
T 1p0f_A 240 CLNPKD-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGS 317 (373)
T ss_dssp EECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEEC
T ss_pred EEeccc-ccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEee
Confidence 998763 11468899999887799999999999776899999999743899999976543345566655554 6 89988
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.++... .++++++++++++|++++.++++++|+|+++++||+.+.+++..|+++++
T Consensus 318 ~~~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~ 373 (373)
T 1p0f_A 318 VFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY 373 (373)
T ss_dssp SGGGCC-GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred ccCCcC-HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence 654332 36899999999999999888899999999999999999887767999875
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-60 Score=455.85 Aligned_cols=371 Identities=44% Similarity=0.801 Sum_probs=313.9
Q ss_pred CCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeeccccccc-ccccCCCCCCCCCCcccccceeEEEEEeC
Q 016363 9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (390)
Q Consensus 9 ~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (390)
+...|++|||+++++++++++++++|.|+|++|||+|||.+++||++|++ ++.|..+ . .+|.++|||++|+|+++|
T Consensus 2 ~~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~--~~P~v~GhE~~G~V~~vG 78 (374)
T 1cdo_A 2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-D--GFPVVLGHEGAGIVESVG 78 (374)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-T--SCSEECCCCEEEEEEEEC
T ss_pred CCCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-C--CCCcccCccceEEEEEEC
Confidence 45789999999999998779999999999999999999999999999999 8888655 3 689999999999999999
Q ss_pred CCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCc
Q 016363 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (390)
Q Consensus 88 ~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (390)
++|++|++||||++.+..+|+.|.+|++++++.|.+.....+.|+..+|..++ .+.|..++++...|+|+||+++|++.
T Consensus 79 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~~~~ 157 (374)
T 1cdo_A 79 PGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIA 157 (374)
T ss_dssp TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCE-EETTEEEEEGGGTCCSBSEEEEEGGG
T ss_pred CCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCcccc-ccCCcccccccCCccceeEEEEchhh
Confidence 99999999999999999999999999999999998754322123322221110 01122233333457999999999999
Q ss_pred eEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 168 v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
++++|+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|
T Consensus 158 ~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG 237 (374)
T 1cdo_A 158 VAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG 237 (374)
T ss_dssp EEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT
T ss_pred eEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999999999878899999999999999999999999999999878999999999999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeE
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV 326 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i 326 (390)
+++++++.+ .+.++.+.+++++++++|+|||++|....++.+++++++++|+++.+|.... ...++++..+.. + ++
T Consensus 238 a~~vi~~~~-~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i 314 (374)
T 1cdo_A 238 ATDFVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-HDVATRPIQLIAGR-TW 314 (374)
T ss_dssp CCEEECGGG-CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-SCEEECHHHHHTTC-EE
T ss_pred CceEEeccc-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCC-CCcccCHHHHhcCC-eE
Confidence 999998753 1146888898888779999999999977689999999974389999997543 345566655555 6 89
Q ss_pred EeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 327 CGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.|+.++.....++++++++++++|++++.++++++|+|+++++||+.+.+++..|+++++
T Consensus 315 ~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~ 374 (374)
T 1cdo_A 315 KGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 374 (374)
T ss_dssp EECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence 998765444467899999999999999888899999999999999999888777999875
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-60 Score=458.79 Aligned_cols=371 Identities=46% Similarity=0.814 Sum_probs=312.5
Q ss_pred CccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 11 ~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
..||+|||+++++++++++++++|.|+|++|||+|||++++||++|++++.|..+.. .+|.++|||++|+|+++|++|
T Consensus 2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~V 79 (373)
T 2fzw_A 2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG--CFPVILGHLGAGIVESVGEGV 79 (373)
T ss_dssp CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTC--CSSBCCCCEEEEEEEEECTTC
T ss_pred CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCC--CCCccccccccEEEEEECCCC
Confidence 578999999999998779999999999999999999999999999999999876544 689999999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
++|++||||++.+..+|+.|.+|+.++++.|.+.....+.|+..+|..++ ...|..++++...|+|+||+++|++.+++
T Consensus 80 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 158 (373)
T 2fzw_A 80 TKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAK 158 (373)
T ss_dssp CSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred CCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccc-cccccccccccCCccceeEEEEchhheEE
Confidence 99999999999999999999999999999998743210012221211000 01122223333457999999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++
T Consensus 159 iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~ 238 (373)
T 2fzw_A 159 IDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 238 (373)
T ss_dssp CCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE
T ss_pred CCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce
Confidence 99999999999999999999999878899999999999999999999999999999878999999999999999999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~ 329 (390)
++++.+ .+.++.+.+++++++++|+|||++|....++.+++++++++|+++.+|........++++..+.. + ++.|+
T Consensus 239 vi~~~~-~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~ 316 (373)
T 2fzw_A 239 CINPQD-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGT 316 (373)
T ss_dssp EECGGG-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEEC
T ss_pred Eecccc-ccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEe
Confidence 998753 11468889998887799999999999776899999999743899999976543345566655554 6 99998
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.++.....++++++++++++|++++.++++++|+|+++++||+.+.+++..|+++++
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~ 373 (373)
T 2fzw_A 317 AFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 373 (373)
T ss_dssp SGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred ccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence 765444467899999999999999888899999999999999999888777999874
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-60 Score=456.43 Aligned_cols=369 Identities=41% Similarity=0.747 Sum_probs=310.0
Q ss_pred CCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCC
Q 016363 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
...|++|||+++++++.+++++++|.|+|++|||+|||++++||++|++++.|. +.. .+|.++|||++|+|+++|++
T Consensus 3 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~--~~P~v~GhE~~G~V~~vG~~ 79 (376)
T 1e3i_A 3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKA--LFPVVLGHECAGIVESVGPG 79 (376)
T ss_dssp TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCC--CSSBCCCCEEEEEEEEECTT
T ss_pred CCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCC--CCCcccCccccEEEEEECCC
Confidence 457899999999999877999999999999999999999999999999999886 333 68999999999999999999
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCC----CCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG----RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~----~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
|++|++||||++.+..+|+.|.+|++++++.|.+.. ...+.|+..+|..++ .+.|..+.++...|+|+||+++|+
T Consensus 80 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~~ 158 (376)
T 1e3i_A 80 VTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF-TCKGRSIYHFMGVSSFSQYTVVSE 158 (376)
T ss_dssp CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEEG
T ss_pred CccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCcccc-ccCCcccccccCCccceeEEEecc
Confidence 999999999999999999999999999999998753 100012222221000 001111222223479999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
+.++++|+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++++++++
T Consensus 159 ~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 159 ANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp GGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred ccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 99999999999999999999999999998788999999999999999999999999999999789999999999999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ce
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR 324 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~ 324 (390)
+|+++++++.+ .+.++.+.+++++++++|+|||++|....++.+++++++++|+++.+|.. ....++++..+.. +
T Consensus 239 lGa~~vi~~~~-~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~--~~~~~~~~~~~~~~~- 314 (376)
T 1e3i_A 239 LGATDCLNPRE-LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK--VDEMTIPTVDVILGR- 314 (376)
T ss_dssp TTCSEEECGGG-CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCS--SSEEEEEHHHHHTTC-
T ss_pred hCCcEEEcccc-ccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCC--CCccccCHHHhhccC-
Confidence 99999998763 11468888988887799999999999776899999999743899999973 3345566665554 6
Q ss_pred eEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 325 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
++.|+.++.....++++++++++++|++++.++++++|+|+++++||+.+.++...|+++++
T Consensus 315 ~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~ 376 (376)
T 1e3i_A 315 SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTILTF 376 (376)
T ss_dssp EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceEEEeC
Confidence 99998765444467899999999999999888899999999999999999888767999875
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-60 Score=455.27 Aligned_cols=367 Identities=28% Similarity=0.511 Sum_probs=307.6
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
.|++|||+++++++++++++++|.|+|++|||+|||++++||++|++++.|..+ . .+|.++|||++|+|+++|++|+
T Consensus 3 ~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~--~~P~v~GhE~~G~V~~vG~~v~ 79 (371)
T 1f8f_A 3 ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-V--PLPAVLGHEGSGIIEAIGPNVT 79 (371)
T ss_dssp -CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-C--CSSBCCCCEEEEEEEEECTTCC
T ss_pred ccccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-C--CCCcccCcccceEEEEeCCCCC
Confidence 367899999999987799999999999999999999999999999999998654 2 5899999999999999999999
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCcee-eccccccccceeEEeeCCceEE
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVI-HHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+|++||||++.+ .+|+.|.+|++++++.|.+.......|...+|..++....|... .+....|+|+||++++++.+++
T Consensus 80 ~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~ 158 (371)
T 1f8f_A 80 ELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVK 158 (371)
T ss_dssp SCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEE
T ss_pred CCCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEE
Confidence 999999999999 99999999999999999875310001111111000000000000 0112347999999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++
T Consensus 159 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~ 238 (371)
T 1f8f_A 159 VTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH 238 (371)
T ss_dssp ECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSE
T ss_pred CCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCE
Confidence 99999999999999999999999878899999999999999999999999999999967999999999999999999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~ 329 (390)
++++.+ .++.+.+++++++++|+|||++|....++.++++++++ |+++.+|........+++...+. +++++.|+
T Consensus 239 vi~~~~---~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 314 (371)
T 1f8f_A 239 VINSKT---QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGV 314 (371)
T ss_dssp EEETTT---SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEEC
T ss_pred EecCCc---cCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEe
Confidence 999876 78899999988779999999999977689999999999 99999997653333455555444 48999998
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecC
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
..+.....++++++++++++|++++.+++++ |+|+++++|++.+.++...|++++++
T Consensus 315 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~~ 371 (371)
T 1f8f_A 315 VEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKIA 371 (371)
T ss_dssp SGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEECC
T ss_pred CCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEeeC
Confidence 7654444578999999999999998888888 99999999999998877679999874
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-59 Score=452.76 Aligned_cols=344 Identities=21% Similarity=0.373 Sum_probs=303.8
Q ss_pred CCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCC
Q 016363 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
..+|++|||+++++++. ++++++|.|+|++|||+|||.+++||++|++++.|..+ . .+|.++|||++|+|+++|++
T Consensus 18 ~~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~--~~p~v~G~e~~G~V~~vG~~ 93 (370)
T 4ej6_A 18 LYFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-S--TPPVTLGHEFCGIVVEAGSA 93 (370)
T ss_dssp ---CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-C--CSSEECCCSEEEEEEEECTT
T ss_pred cccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-C--CCCeecCcceEEEEEEECCC
Confidence 35789999999999976 99999999999999999999999999999999998763 2 58999999999999999999
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceE
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 169 (390)
|++|++||||++.+..+|+.|.+|+.++++.|.+... .|...+ |+|+||++++++.++
T Consensus 94 v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~ 151 (370)
T 4ej6_A 94 VRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRA---IGIHRD-------------------GGFAEYVLVPRKQAF 151 (370)
T ss_dssp CCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---BTTTBC-------------------CSSBSEEEEEGGGEE
T ss_pred CCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccc---cCCCCC-------------------CcceEEEEEchhhEE
Confidence 9999999999999999999999999999999987644 344444 489999999999999
Q ss_pred EcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 170 ~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
++|+++++++|| ++.+++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++
T Consensus 152 ~~P~~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 229 (370)
T 4ej6_A 152 EIPLTLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT 229 (370)
T ss_dssp EECTTSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS
T ss_pred ECCCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC
Confidence 999999999998 666899999988 889999999999999999999999999999998899999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHh---hcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-cee
Q 016363 250 DFINPATCGDKTVSQVIKE---MTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS 325 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~---~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~ 325 (390)
+++++.+ .++.+.+++ ++++++|+||||+|....++.++++++++ |+++.+|........+++...+.. +++
T Consensus 230 ~vi~~~~---~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~ 305 (370)
T 4ej6_A 230 ATVDPSA---GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELR 305 (370)
T ss_dssp EEECTTS---SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCE
T ss_pred EEECCCC---cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcE
Confidence 9999877 789999988 77779999999999877799999999999 999999976544455666665554 999
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc--eEEEEecCCC
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWMDKL 389 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl~~~~~ 389 (390)
+.|+.... ++++++++++++|++++.++++++|+|+++++|++.+.++.. .|++++++++
T Consensus 306 i~g~~~~~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~i 367 (370)
T 4ej6_A 306 VLGSFINP----FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAERV 367 (370)
T ss_dssp EEECCSCT----TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC----
T ss_pred EEEeccCh----HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccccc
Confidence 99986543 568999999999999999999999999999999999987763 3999988764
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-57 Score=435.56 Aligned_cols=336 Identities=26% Similarity=0.408 Sum_probs=299.7
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
+|||+++++++++++++++|.|+|++|||+|||++++||++|+++++|..+.. ..+|.++|||++|+|+++|++|++|+
T Consensus 2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~P~v~G~E~~G~V~~vG~~v~~~~ 80 (340)
T 3s2e_A 2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK-PTLPFIPGHEGVGYVSAVGSGVSRVK 80 (340)
T ss_dssp EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSC-CCSSBCCCSEEEEEEEEECSSCCSCC
T ss_pred ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCC-CCCCcccCCcceEEEEEECCCCCcCC
Confidence 69999999998889999999999999999999999999999999999987643 26899999999999999999999999
Q ss_pred CCCEE-eeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V-~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+|||| +..+..+|+.|.+|+.++++.|.+... .|+..+ |+|+||+++|++.++++|+
T Consensus 81 vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~iP~ 138 (340)
T 3s2e_A 81 EGDRVGVPWLYSACGYCEHCLQGWETLCEKQQN---TGYSVN-------------------GGYGEYVVADPNYVGLLPD 138 (340)
T ss_dssp TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBC-------------------CSSBSEEEECTTTSEECCT
T ss_pred CCCEEEecCCCCCCCCChHHhCcCcccCccccc---cCCCCC-------------------CcceeEEEechHHEEECCC
Confidence 99999 456788999999999999999987654 344444 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++++
T Consensus 139 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~ 216 (340)
T 3s2e_A 139 KVGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVN 216 (340)
T ss_dssp TSCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 999999999999999999998 77899999999999999999999999999999 9999999999999999999999999
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 332 (390)
+.+ .++.+.+++ +.+++|+|||++|....++.++++++++ |+++.+|.... ..+++...+ .+++++.|+..+
T Consensus 217 ~~~---~~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~~~ 289 (340)
T 3s2e_A 217 ARD---TDPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPG--DFGTPIFDVVLKGITIRGSIVG 289 (340)
T ss_dssp TTT---SCHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCSS--EEEEEHHHHHHTTCEEEECCSC
T ss_pred CCC---cCHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCCC--CCCCCHHHHHhCCeEEEEEecC
Confidence 887 788888888 4448999999999888899999999999 99999996543 344555444 448999998655
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
. .++++++++++++|++++. + ++|+|+++++||+.+.+++.. |+|+++++
T Consensus 290 ~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~ 340 (340)
T 3s2e_A 290 T---RSDLQESLDFAAHGDVKAT--V-STAKLDDVNDVFGRLREGKVEGRVVLDFSR 340 (340)
T ss_dssp C---HHHHHHHHHHHHTTSCCCC--E-EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred C---HHHHHHHHHHHHhCCCCce--E-EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 4 6789999999999988763 4 788999999999999988875 99999875
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-58 Score=440.55 Aligned_cols=339 Identities=22% Similarity=0.359 Sum_probs=290.5
Q ss_pred CCCCCccceeeEEEeecCCCCcEEEEeecCC-CCCCeEEEEEeeeecccccccccccCCC---CCCCCCCcccccceeEE
Q 016363 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTD---LPKLPLPVIFGHEAVGV 82 (390)
Q Consensus 7 ~~~~~~~~t~~a~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~~~p~~~G~e~~G~ 82 (390)
-+....|++|||+++++++++++++++|.|+ |++|||+|||.+++||++|++.+.|..+ .. .+|.++|||++|+
T Consensus 7 ~~~~~~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~--~~p~v~G~E~~G~ 84 (359)
T 1h2b_A 7 FSQSLGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQP--KLPYTLGHENVGY 84 (359)
T ss_dssp ----------CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCC--CSSEECCCCEEEE
T ss_pred hhhcCChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCC--CCCeecCcCceEE
Confidence 3444568899999999998679999999999 9999999999999999999999998754 23 5899999999999
Q ss_pred EEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEE
Q 016363 83 VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSV 162 (390)
Q Consensus 83 V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~ 162 (390)
|+++|++|++|++||||++.+..+|+.|.+|+.++++.|.+... .|+..+ |+|+||++
T Consensus 85 V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~-------------------G~~aey~~ 142 (359)
T 1h2b_A 85 IEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNID-------------------GGFAEFMR 142 (359)
T ss_dssp EEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBC-------------------CSSBSEEE
T ss_pred EEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc---cccCCC-------------------CcccceEE
Confidence 99999999999999999999999999999999999999987543 333333 48999999
Q ss_pred eeCCceEEcCCCCCcchhh---ccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCCh
Q 016363 163 VDITHVVKITPHIPLGIAC---LLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINP 237 (390)
Q Consensus 163 v~~~~v~~~p~~~~~~~aa---~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~ 237 (390)
+|++.++++|+++++++|| .+++++.|||+++.+. +++++|++|||+|+|++|++++|+|+.+ |+ +|+++++++
T Consensus 143 v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~ 221 (359)
T 1h2b_A 143 TSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKE 221 (359)
T ss_dssp ECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSH
T ss_pred echHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCH
Confidence 9999999999999999999 7888899999998655 8999999999999999999999999999 99 899999999
Q ss_pred hhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChH--HHHHHHHHhccCCceEEEEcccCCCCCcc
Q 016363 238 EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTS--VMNDAFNSSREGWGKTVILGVEMHGSPIS 314 (390)
Q Consensus 238 ~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 314 (390)
+|+++++++|+++++++.+ . +.+.+++++++ ++|+|||++|+.. .++.++++ ++ |+++.+|..... +
T Consensus 222 ~~~~~~~~lGa~~vi~~~~---~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~~---~ 291 (359)
T 1h2b_A 222 EKLKLAERLGADHVVDARR---D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGEL---R 291 (359)
T ss_dssp HHHHHHHHTTCSEEEETTS---C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSCC---C
T ss_pred HHHHHHHHhCCCEEEeccc---h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCCC---C
Confidence 9999999999999999877 5 88889999888 9999999999985 58888887 67 999999975432 4
Q ss_pred cchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-eEEEEec
Q 016363 315 LNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM 386 (390)
Q Consensus 315 ~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~~ 386 (390)
++...+ .+++++.|+..+. .++++++++++++|++++ .+ ++|+|+++++|++.+.++.. +|+|+++
T Consensus 292 ~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 359 (359)
T 1h2b_A 292 FPTIRVISSEVSFEGSLVGN---YVELHELVTLALQGKVRV--EV-DIHKLDEINDVLERLEKGEVLGRAVLIP 359 (359)
T ss_dssp CCHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCC--CE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred CCHHHHHhCCcEEEEecCCC---HHHHHHHHHHHHcCCCcc--eE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence 454444 4589999986543 678999999999998765 47 99999999999999988876 4999874
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-57 Score=435.43 Aligned_cols=342 Identities=26% Similarity=0.397 Sum_probs=286.5
Q ss_pred cceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeeccccccccccc-CCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 13 ~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g-~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
.++|||+++++++..++++++|.|+|++|||+|||.+++||++|++.+.| .++.....+|.++|||++|+|+++|++|+
T Consensus 2 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~ 81 (348)
T 2d8a_A 2 SEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE 81 (348)
T ss_dssp -CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred CCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence 45799999999985599999999999999999999999999999999988 33200015899999999999999999999
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
+|++||||++.+..+|+.|.+|++|+++.|.+... .|...+ |+|+||+++|++.++++
T Consensus 82 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~i 139 (348)
T 2d8a_A 82 GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD-------------------GVFAEYAVVPAQNIWKN 139 (348)
T ss_dssp SCCTTCEEEECCEECCSCCC------------CEE---TTTSSC-------------------CSSBSEEEEEGGGEEEC
T ss_pred cCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe---ecCCCC-------------------CcCcceEEeChHHeEEC
Confidence 99999999999999999999999999999987543 333333 48999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
|+++++++||.++ +++|||+++ +.+++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++
T Consensus 140 P~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~ 216 (348)
T 2d8a_A 140 PKSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV 216 (348)
T ss_dssp CTTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE
T ss_pred CCCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE
Confidence 9999999999886 789999998 78889 99999999999999999999999998789999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch-Hhh-hcceeEEe
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEI-LKGRSVCG 328 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~-~~~~~i~g 328 (390)
+++.+ .++.+.+++++++ ++|+|||++|....++.++++++++ |+++.+|.... ..+++. ..+ .+++++.|
T Consensus 217 ~~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~~i~g 290 (348)
T 2d8a_A 217 INPFE---EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPG--KVTIDFNNLIIFKALTIYG 290 (348)
T ss_dssp ECTTT---SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHTTTTTCEEEE
T ss_pred ECCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CcccCchHHHHhCCcEEEE
Confidence 99876 7899999999887 9999999999977689999999999 99999997543 344554 444 44899999
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeec-cccHHHHHHHHhcCCceEEEEecC
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVS-FHDINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-l~~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
+.... ..++++++++++++|++++.++++++|+ |+++++|++.+.++..+|++++++
T Consensus 291 ~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi~~~ 348 (348)
T 2d8a_A 291 ITGRH--LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFMLK 348 (348)
T ss_dssp CCCCC--SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEEEC-
T ss_pred ecCCC--cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhCCCceEEEEeeC
Confidence 75432 1578999999999999988888999999 999999999997754459999864
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-57 Score=437.47 Aligned_cols=342 Identities=24% Similarity=0.343 Sum_probs=300.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeeccccccc-ccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||++++++++ +++.++|.|+|++|||+|||++++||++|++ ++.|..+. .+|.++|||++|+|+++|++|++|+
T Consensus 1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~---~~p~v~G~E~~G~V~~vG~~v~~~~ 76 (352)
T 3fpc_A 1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFK 76 (352)
T ss_dssp CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC---CSSEECCCEEEEEEEEECTTCCSCC
T ss_pred CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC---CCCcccCCcceEEEEEECCCCCcCC
Confidence 89999999988 8999999999999999999999999999999 55776542 5799999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||||++.+..+|+.|.+|..++.+.|.........+...+ |+|+||++++++ .++++|
T Consensus 77 vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------------G~~aey~~v~~~~~~~~~iP 137 (352)
T 3fpc_A 77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKD-------------------GVFGEFFHVNDADMNLAHLP 137 (352)
T ss_dssp TTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBC-------------------CSSBSCEEESSHHHHCEECC
T ss_pred CCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCC-------------------CcccceEEeccccCeEEECC
Confidence 99999999999999999999999999976543322333333 589999999976 999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++|+.++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++
T Consensus 138 ~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi 216 (352)
T 3fpc_A 138 KEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDII 216 (352)
T ss_dssp TTSCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEE
T ss_pred CCCCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEE
Confidence 9999999999999999999997 889999999999999999999999999999997899999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh---hcceeEEe
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI---LKGRSVCG 328 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g 328 (390)
++++ .++.+.+++++++ ++|+|||++|++..++.++++++++ |+++.+|.......++++...+ .+++++.|
T Consensus 217 ~~~~---~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g 292 (352)
T 3fpc_A 217 NYKN---GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHG 292 (352)
T ss_dssp CGGG---SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEE
T ss_pred cCCC---cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEE
Confidence 9877 7899999999988 9999999999976699999999999 9999999765444444444322 35788888
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeec-cccHHHHHHHHhcCC-c-eEEEEecC
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVS-FHDINKAFDLLLEGK-S-LRCIIWMD 387 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-l~~~~~A~~~~~~~~-~-~kvvl~~~ 387 (390)
+.... ..++++++++++++|++++.++++++|+ |+++++||+.+.++. . +|+|++++
T Consensus 293 ~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~ 352 (352)
T 3fpc_A 293 GLCPG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA 352 (352)
T ss_dssp BCCCC--HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred eeccC--chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence 75422 2567999999999999999999999999 999999999998754 3 49999874
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-57 Score=433.38 Aligned_cols=339 Identities=21% Similarity=0.344 Sum_probs=297.7
Q ss_pred eeEEEeecCCCCcEEEEeecCC-CCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||++++++|. ++++++|+|+ ++||||||||.++|||++|++.+.|..+. .+|.++|||++|+|+++|++|++|+
T Consensus 1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~---~~P~i~G~E~~G~V~~vG~~V~~~~ 76 (346)
T 4a2c_A 1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH---YYPITLGHEFSGYIDAVGSGVDDLH 76 (346)
T ss_dssp CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS---SSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC---CCCccccEEEEEEEEEECCCccccc
Confidence 89999999987 9999999998 57999999999999999999999886543 5899999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++++.|.+... .|...+| +|+||+++|++.++++|++
T Consensus 77 ~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~ 134 (346)
T 4a2c_A 77 PGDAVACVPLLPCFTCPECLKGFYSQCAKYDF---IGSRRDG-------------------GFAEYIVVKRKNVFALPTD 134 (346)
T ss_dssp TTCEEEECCEECCSCSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEEEGGGEEECCTT
T ss_pred CCCeEEeeeccCCCCcccccCCccccCCCccc---ccCCCCc-------------------ccccccccchheEEECCCC
Confidence 99999999999999999999999999987654 4555554 8999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++++||.++ ++.++++ +.+..++++|++|||+|+|++|++++|+|+.+|++.+++++++++|+++++++|+++++++
T Consensus 135 l~~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~ 212 (346)
T 4a2c_A 135 MPIEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNS 212 (346)
T ss_dssp SCGGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred CCHHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeC
Confidence 9999999876 4555555 5688999999999999999999999999999999778899999999999999999999999
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcc-cchHh-hhcceeEEeeec
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIE-ILKGRSVCGTYF 331 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~-~~~~~~i~g~~~ 331 (390)
.+ .++.+.+++++++ ++|+|+|++|.+..++.++++++++ |+++.+|......... ++... +.+++++.|+..
T Consensus 213 ~~---~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~ 288 (346)
T 4a2c_A 213 SE---MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWM 288 (346)
T ss_dssp TT---SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCT
T ss_pred CC---CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEec
Confidence 88 7888888888887 9999999999988899999999999 9999999765432222 22223 345999999865
Q ss_pred CCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 332 GGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 332 ~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.... ..++++++++++++|++++.++++++|+|+++++|++.+.+++.. |+||.+
T Consensus 289 ~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P 346 (346)
T 4a2c_A 289 NYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346 (346)
T ss_dssp TCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred cccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence 4322 356899999999999999999999999999999999999888765 999864
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-57 Score=438.77 Aligned_cols=344 Identities=21% Similarity=0.297 Sum_probs=295.9
Q ss_pred ccceeeEEEeecCCCCcEEEEeecC--------CCCCCeEEEEEeeeecccccccccccCC-CCCCCCCCcccccceeEE
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVE--------PPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGV 82 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p--------~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~ 82 (390)
+|++|||+++.+++. +++.++|.| +|++|||||||.+++||++|++++++.. ......+|.++|||++|+
T Consensus 5 ~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~ 83 (363)
T 3m6i_A 5 ASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE 83 (363)
T ss_dssp CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred CcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence 789999999999877 999999999 9999999999999999999999987432 111126799999999999
Q ss_pred EEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEE
Q 016363 83 VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSV 162 (390)
Q Consensus 83 V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~ 162 (390)
|+++|++|++|++||||++.+..+|+.|.+|..|+++.|.+... .|... ..|+|+||++
T Consensus 84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~------------------~~G~~aey~~ 142 (363)
T 3m6i_A 84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF---LSTPP------------------VPGLLRRYVN 142 (363)
T ss_dssp EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTSTT------------------SCCSCBSEEE
T ss_pred EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccc---cCCCC------------------CCccceeEEE
Confidence 99999999999999999999999999999999999999988654 22221 1258999999
Q ss_pred eeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHH
Q 016363 163 VDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242 (390)
Q Consensus 163 v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~ 242 (390)
+|++.++++|+ +++++||.+. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++
T Consensus 143 v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~ 219 (363)
T 3m6i_A 143 HPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKF 219 (363)
T ss_dssp EEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHH
T ss_pred EehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 99999999999 9999999884 789999998 88999999999999999999999999999999559999999999999
Q ss_pred HHhcCCcEEEcCC--CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh
Q 016363 243 GKKFGITDFINPA--TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 319 (390)
Q Consensus 243 ~~~~g~~~v~~~~--~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~ 319 (390)
++++ ++.++++. .....++.+.+++++++ ++|+|||++|++..++.++++++++ |+++.+|..... ..++...
T Consensus 220 a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~ 295 (363)
T 3m6i_A 220 AKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKNE--IQIPFMR 295 (363)
T ss_dssp HHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCSC--CCCCHHH
T ss_pred HHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCCC--ccccHHH
Confidence 9999 65555432 11125788999999988 9999999999987689999999999 999999975433 3344444
Q ss_pred hh-cceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcC-Cc-eEEEEecCC
Q 016363 320 IL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG-KS-LRCIIWMDK 388 (390)
Q Consensus 320 ~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~-~~-~kvvl~~~~ 388 (390)
+. +++++.|+... .++++++++++++|++++.++++++|+|+++++||+.+.++ .. +|++++.++
T Consensus 296 ~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 363 (363)
T 3m6i_A 296 ASVREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE 363 (363)
T ss_dssp HHHHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred HHhcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 44 48999988644 46899999999999999999999999999999999999886 34 499999874
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-57 Score=432.51 Aligned_cols=343 Identities=22% Similarity=0.346 Sum_probs=293.2
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CCCCCCCCcccccceeEEEEEeCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
|+++|||+++++++. ++++++|.|+|++|||+|||++++||++|++.+.+.. ......+|.++|||++|+|+++|++|
T Consensus 1 m~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v 79 (352)
T 1e3j_A 1 MASDNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV 79 (352)
T ss_dssp ---CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTC
T ss_pred CcccCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCC
Confidence 457899999999876 9999999999999999999999999999999887432 21112579999999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
++|++||||++.+..+|+.|.+|+.++++.|.+... .|... ..|+|+||+++|++.+++
T Consensus 80 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~------------------~~G~~aey~~v~~~~~~~ 138 (352)
T 1e3j_A 80 KHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF---CATPP------------------DDGNLARYYVHAADFCHK 138 (352)
T ss_dssp CSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---TTBTT------------------BCCSCBSEEEEEGGGEEE
T ss_pred CCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcc---cCcCC------------------CCccceeEEEeChHHeEE
Confidence 999999999999999999999999999999987543 23211 125899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++++++||.+ .+++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++
T Consensus 139 iP~~~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~ 215 (352)
T 1e3j_A 139 LPDNVSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADV 215 (352)
T ss_dssp CCTTSCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSE
T ss_pred CcCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCE
Confidence 9999999999876 4788999998 88999999999999999999999999999999 7999999999999999999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcC---C-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-ccee
Q 016363 251 FINPATCGDKTVSQVIKEMTD---G-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRS 325 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~---~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~ 325 (390)
++++.+ ..++.+.+++.++ + ++|+|||++|....++.++++++++ |+++.+|.... ..+++...+. ++++
T Consensus 216 ~~~~~~--~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~ 290 (352)
T 1e3j_A 216 TLVVDP--AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQ--MVTVPLVNACAREID 290 (352)
T ss_dssp EEECCT--TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSS--CCCCCHHHHHTTTCE
T ss_pred EEcCcc--cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CccccHHHHHhcCcE
Confidence 998762 1467788888775 4 8999999999987689999999999 99999996432 2344444444 4889
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC-c-eEEEEecCC
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRCIIWMDK 388 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~kvvl~~~~ 388 (390)
+.|+... .++++++++++++|++++.++++++|+|+++++||+.+.++. . +|+|+++++
T Consensus 291 i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 351 (352)
T 1e3j_A 291 IKSVFRY----CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ 351 (352)
T ss_dssp EEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred EEEeccc----hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence 9987543 357999999999999988888999999999999999998876 3 499999864
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-57 Score=433.94 Aligned_cols=344 Identities=19% Similarity=0.321 Sum_probs=295.3
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCCCcccccceeEEEEEeCCCCCc
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|+|||+++++++. +++.++|.|+|++|||+|||.++|||++|++.+.+.... ....+|.++|||++|+|+++|++|++
T Consensus 6 ~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~ 84 (356)
T 1pl8_A 6 PNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH 84 (356)
T ss_dssp CCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred cCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence 6799999999875 999999999999999999999999999999988753211 11157899999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||||++.+..+|+.|.+|+.|+++.|.+... .|... ..|+|+||+++|++.++++|
T Consensus 85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~------------------~~G~~aey~~v~~~~~~~iP 143 (356)
T 1pl8_A 85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPP------------------DDGNLCRFYKHNAAFCYKLP 143 (356)
T ss_dssp CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTT------------------BCCSCBSEEEEEGGGEEECC
T ss_pred CCCCCEEEEeccCCCCCChHHHCcCcccCCCccc---cCcCC------------------CCCccccEEEeehHHEEECc
Confidence 9999999999999999999999999999987543 23211 12589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++|+.+ .+++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++
T Consensus 144 ~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 144 DNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVL 221 (356)
T ss_dssp TTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred CCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 99999999876 4789999998 889999999999999999999999999999998899999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
++...++.++.+.+++.+++++|+|||++|....++.++++++++ |+++.+|.... ..+++...+ .+++++.|+..
T Consensus 222 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~~ 298 (356)
T 1pl8_A 222 QISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSE--MTTVPLLHAAIREVDIKGVFR 298 (356)
T ss_dssp ECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCS--CCCCCHHHHHHTTCEEEECCS
T ss_pred cCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCCC--CCccCHHHHHhcceEEEEecc
Confidence 876100146778888877668999999999987689999999999 99999996432 334554444 44899998854
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecCC
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK 388 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~~ 388 (390)
. .++++++++++++|++++.++++++|+|+++++||+.+.++..+|+++++++
T Consensus 299 ~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~~ 351 (356)
T 1pl8_A 299 Y----CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDP 351 (356)
T ss_dssp C----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEECCT
T ss_pred c----HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeCCC
Confidence 3 3579999999999999888889999999999999999988844499999864
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-57 Score=432.19 Aligned_cols=339 Identities=25% Similarity=0.396 Sum_probs=295.5
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++++++++++++++|.|+|++|||||||++++||++|+++++|..+.....+|.++|||++|+|+++|++|++|++
T Consensus 1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v 80 (345)
T 3jv7_A 1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV 80 (345)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence 89999999998899999999999999999999999999999999998765332368999999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcC-CCCCC-CCCCCCCCCcccccccCceeeccccccccceeEEee-CCceEEcC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGY-RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITHVVKIT 172 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~-~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~v~~~p 172 (390)
||+|++.+..+|+.|.+|.+++++.|.. ...+. ..|...+ |+|+||+++| ++.++++|
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~~~p 141 (345)
T 3jv7_A 81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSP-------------------GSMAEYMIVDSARHLVPIG 141 (345)
T ss_dssp TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBC-------------------CSSBSEEEESCGGGEEECT
T ss_pred CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCC-------------------ceeeEEEEecchhceEeCC
Confidence 9999999999999999999999999943 22110 0122222 5899999999 99999999
Q ss_pred CCCCcchhhccccchhhHHHHHHH-HhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWK-VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~-~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+ +++++||.++++++|||+++.+ ..++++|++|||+|+|++|++++|+|+.+|..+|++++++++|+++++++|++++
T Consensus 142 ~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~ 220 (345)
T 3jv7_A 142 D-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAA 220 (345)
T ss_dssp T-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEE
T ss_pred C-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEE
Confidence 9 9999999999999999999866 4589999999999999999999999999954499999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (390)
+++++ ++.+.+++++++ ++|+|||++|+...++.++++++++ |+++.+|..... ..+++...+.+++++.|+.
T Consensus 221 i~~~~----~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~ 294 (345)
T 3jv7_A 221 VKSGA----GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGA-HAKVGFFMIPFGASVVTPY 294 (345)
T ss_dssp EECST----THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTTC-CEEESTTTSCTTCEEECCC
T ss_pred EcCCC----cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-CCCcCHHHHhCCCEEEEEe
Confidence 98764 789999999988 9999999999986699999999999 999999976532 3444443344589999886
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+. .++++++++++++|++++ ++++|+|+++++||+.+.+++.. |+|+++
T Consensus 295 ~~~---~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p 345 (345)
T 3jv7_A 295 WGT---RSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSIRGRGVVVP 345 (345)
T ss_dssp SCC---HHHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred cCC---HHHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence 554 678999999999998886 34899999999999999988875 999874
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-57 Score=432.95 Aligned_cols=342 Identities=21% Similarity=0.296 Sum_probs=289.9
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
|+|+|||+++.+++++++++++|.|+|++|||||||.+++||++|+++++|..+.. .+|.++|||++|+|+++|++|+
T Consensus 1 M~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~E~~G~V~~vG~~v~ 78 (348)
T 3two_A 1 MRVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEG--IYPMIPGHEIAGIIKEVGKGVK 78 (348)
T ss_dssp CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCC--CSSBCCCCCEEEEEEEECTTCC
T ss_pred CceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCC--CCCeecCcceeEEEEEECCCCC
Confidence 56899999999998889999999999999999999999999999999999987665 7899999999999999999999
Q ss_pred cCCCCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 92 EVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 92 ~~~vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+|++||||++.+. .+|+.|.+|+.++++.|..... ++..+.... ......|+|+||+++|++.+++
T Consensus 79 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~----~~~~~~~~~---------~~~~~~G~~aey~~v~~~~~~~ 145 (348)
T 3two_A 79 KFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVF----TYDCLDSFH---------DNEPHMGGYSNNIVVDENYVIS 145 (348)
T ss_dssp SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEE----SSSSEEGGG---------TTEECCCSSBSEEEEEGGGCEE
T ss_pred CCCCCCEEEEeCCcCCCCCChhHhCCCcccCccccc----ccccccccc---------cCCcCCccccceEEechhhEEE
Confidence 9999999988654 6999999999999999983221 221110000 0001126999999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++
T Consensus 146 iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~ 223 (348)
T 3two_A 146 VDKNAPLEKVAPLLCAGITTYSPL-KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKH 223 (348)
T ss_dssp CCTTSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSE
T ss_pred CCCCCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCe
Confidence 999999999999999999999988 56799999999999999999999999999999 9999999999999999999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcc-cchHhh--hcceeEE
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEI--LKGRSVC 327 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~--~~~~~i~ 327 (390)
++ .+. ..+ ..++|+|||++|+...++.++++++++ |+++.+|..... ..+ ++...+ .+++++.
T Consensus 224 v~-~~~---~~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~i~ 289 (348)
T 3two_A 224 FY-TDP---KQC--------KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVE-VAPVLSVFDFIHLGNRKVY 289 (348)
T ss_dssp EE-SSG---GGC--------CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCGG-GCCEEEHHHHHHTCSCEEE
T ss_pred ec-CCH---HHH--------hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCCC-CcccCCHHHHHhhCCeEEE
Confidence 88 322 111 118999999999985599999999999 999999965411 222 454444 4599999
Q ss_pred eeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCCCC
Q 016363 328 GTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKLI 390 (390)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~~~ 390 (390)
|+..+. .++++++++++++|++++. + ++|+|+++++||+.+.+++.. |+|+++++++
T Consensus 290 g~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~~ 347 (348)
T 3two_A 290 GSLIGG---IKETQEMVDFSIKHNIYPE--I-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKSF 347 (348)
T ss_dssp ECCSCC---HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGCC
T ss_pred EEecCC---HHHHHHHHHHHHhCCCCce--E-EEEEHHHHHHHHHHHHcCCCceEEEEecCCcC
Confidence 987654 5789999999999988763 4 799999999999999988875 9999998764
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-57 Score=431.70 Aligned_cols=337 Identities=25% Similarity=0.406 Sum_probs=296.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC---CCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD---LPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|||+++++++++++++++|.|+|++|||+|||.++|||++|++++.|..+ .. .+|.++|||++|+|+++|++|++
T Consensus 1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~--~~p~v~G~E~~G~V~~vG~~v~~ 78 (343)
T 2dq4_A 1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRI--RPPLVTGHEFSGVVEAVGPGVRR 78 (343)
T ss_dssp CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHC--CSSEECCCEEEEEEEEECTTCCS
T ss_pred CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccC--CCCCcCCccceEEEEEECCCCCc
Confidence 79999999987799999999999999999999999999999999988654 23 58999999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||||++.+..+|+.|.+|+.|+++.|.+... .|...+ |+|+||++++++.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~iP 136 (343)
T 2dq4_A 79 PQVGDHVSLESHIVCHACPACRTGNYHVCLNTQI---LGVDRD-------------------GGFAEYVVVPAENAWVNP 136 (343)
T ss_dssp SCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---BTTTBC-------------------CSSBSEEEEEGGGEEEEC
T ss_pred CCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---ecCCCC-------------------CcceeEEEEchHHeEECC
Confidence 9999999999999999999999999999987543 233333 489999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++|+.+. ++.|||+++.+.+++ +|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++ +++++
T Consensus 137 ~~~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~ 213 (343)
T 2dq4_A 137 KDLPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLV 213 (343)
T ss_dssp TTSCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEE
T ss_pred CCCCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhcc
Confidence 999999999874 788999998548899 999999999999999999999999987899999999999999999 99999
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch-Hhh-hcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEI-LKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~-~~~~~i~g~~ 330 (390)
++.+ .++.+.+++++++++|+|||++|+...++.++++++++ |+++.+|.... ..+++. ..+ .+++++.|+.
T Consensus 214 ~~~~---~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~~i~g~~ 287 (343)
T 2dq4_A 214 NPLE---EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSD--PIRFDLAGELVMRGITAFGIA 287 (343)
T ss_dssp CTTT---SCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CEEECHHHHTGGGTCEEEECC
T ss_pred CcCc---cCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CceeCcHHHHHhCceEEEEee
Confidence 9876 78999999888339999999999966689999999999 99999997532 345555 443 4589999986
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecC
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
... ..++++++++++++|++++.++++++|+|+++++|++.+.++..+|++++++
T Consensus 288 ~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~~ 342 (343)
T 2dq4_A 288 GRR--LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPK 342 (343)
T ss_dssp SCC--TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSCSEEEEETT
T ss_pred cCC--CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCceEEEEeeC
Confidence 442 2578999999999999888888999999999999999998776689999876
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-55 Score=421.36 Aligned_cols=335 Identities=28% Similarity=0.445 Sum_probs=293.2
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++++++++++++++|.|+|++|||+|||.+++||++|++.+.|..+.. ..+|.++|||++|+|+++|++|++|++
T Consensus 1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~GhE~~G~V~~vG~~v~~~~v 79 (339)
T 1rjw_A 1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVK-PKLPLIPGHEGVGIVEEVGPGVTHLKV 79 (339)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC-CCSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcC-CCCCeeccccceEEEEEECCCCCcCCC
Confidence 7999999998669999999999999999999999999999999999876532 268999999999999999999999999
Q ss_pred CCEEeeeccc-CCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 96 RDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 96 Gd~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
||||++.+.. +|+.|.+|+.++++.|.+... .|...+ |+|+||+++|++.++++|++
T Consensus 80 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~~P~~ 137 (339)
T 1rjw_A 80 GDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVD-------------------GGYAEYCRAAADYVVKIPDN 137 (339)
T ss_dssp TCEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBC-------------------CSSBSEEEEEGGGCEECCTT
T ss_pred CCEEEEecCCCCCCCCchhhCcCcccCCCcce---eecCCC-------------------CcceeeEEechHHEEECCCC
Confidence 9999986644 599999999999999987543 233333 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|++.++++
T Consensus 138 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~ 215 (339)
T 1rjw_A 138 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP 215 (339)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred CCHHHhhhhhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecC
Confidence 99999999999999999998 44599999999999998899999999999999 99999999999999999999999988
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 333 (390)
.+ .++.+.+++.+ +++|+|||++|....++.++++++++ |+++.+|.... ..+++...+. +++++.|+..+.
T Consensus 216 ~~---~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~ 288 (339)
T 1rjw_A 216 LK---EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPE--EMPIPIFDTVLNGIKIIGSIVGT 288 (339)
T ss_dssp TT---SCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--EEEEEHHHHHHTTCEEEECCSCC
T ss_pred CC---ccHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCC--CCccCHHHHHhCCcEEEEeccCC
Confidence 76 67888888877 68999999999977689999999999 99999997543 2455554444 489999886543
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-eEEEEecCC
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWMDK 388 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~~~~ 388 (390)
.++++++++++++|++++. + ++|+|+++++|++.+.+++. +|+++++++
T Consensus 289 ---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 338 (339)
T 1rjw_A 289 ---RKDLQEALQFAAEGKVKTI--I-EVQPLEKINEVFDRMLKGQINGRVVLTLED 338 (339)
T ss_dssp ---HHHHHHHHHHHHTTSCCCC--E-EEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred ---HHHHHHHHHHHHcCCCCcc--E-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 5789999999999988764 4 78999999999999988765 499999875
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-56 Score=424.86 Aligned_cols=336 Identities=26% Similarity=0.370 Sum_probs=294.9
Q ss_pred eeEEEeecC-CCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIP-GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++++. .+.+++.++|+|+|+||||||||.++|||++|+++++|..+. ++|.++|||++|+|+++|++|++|+
T Consensus 1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~---~~p~i~GhE~aG~V~~vG~~V~~~~ 77 (348)
T 4eez_A 1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN---KAGTVLGHEGIGIVKEIGADVSSLQ 77 (348)
T ss_dssp CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC---CTTCBCCSEEEEEEEEECTTCCSCC
T ss_pred CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC---CCCcccceeEEEEEEEECceeeecc
Confidence 899998754 345999999999999999999999999999999999997653 5899999999999999999999999
Q ss_pred CCCEEeeeccc-CCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+||||++.+.. .|+.|.+|..+..+.|..... .+...+ |+|+||+.++++.++++|+
T Consensus 78 ~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~-------------------G~~ae~~~~~~~~~~~iP~ 135 (348)
T 4eez_A 78 VGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN---AGYSVD-------------------GGMAEEAIVVADYAVKVPD 135 (348)
T ss_dssp TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTTBC-------------------CSSBSEEEEEGGGSCBCCT
T ss_pred cCCeEeecccccccCccccccCCcccccccccc---cccccC-------------------CcceeeccccccceeecCC
Confidence 99999887765 568999999999999987654 334444 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++|+++++++.|||+++ +.+++++|++|||+|+|++|.+++|+|+.++..+||+++++++|+++++++|+++++|
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~ 214 (348)
T 4eez_A 136 GLDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTIN 214 (348)
T ss_dssp TSCHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEe
Confidence 999999999999999999987 7889999999999999999999999999775449999999999999999999999999
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
+.+ .++.+.+++++++ ++|++++++++..++..++++++++ |+++.+|.... ..+++...+ .+++++.|+..
T Consensus 215 ~~~---~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~gs~~ 288 (348)
T 4eez_A 215 SGD---VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPNT--EMTLSVPTVVFDGVEVAGSLV 288 (348)
T ss_dssp C-C---CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCSC--EEEECHHHHHHSCCEEEECCS
T ss_pred CCC---CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccCC--CCccCHHHHHhCCeEEEEEec
Confidence 988 8899999999999 9999999999999899999999999 99999996543 334444444 45999999876
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCCC
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL 389 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~~ 389 (390)
+. +++++++++++++|++++ ++ ++|+|+++++||+.+++++.. |+||+|+++
T Consensus 289 ~~---~~~~~~~~~l~~~g~i~p--~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~skL 341 (348)
T 4eez_A 289 GT---RLDLAEAFQFGAEGKVKP--IV-ATRKLEEINDIIDEMKAGKIEGRMVIDFTKL 341 (348)
T ss_dssp CC---HHHHHHHHHHHHTTSCCC--CE-EEECGGGHHHHHHHHHTTCCSSEEEEECC--
T ss_pred CC---HHHHHHHHHHHHcCCCEE--EE-EEEeHHHHHHHHHHHHCCCCccEEEEEcccc
Confidence 54 678999999999998864 34 899999999999999998875 999999876
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-56 Score=430.18 Aligned_cols=348 Identities=25% Similarity=0.371 Sum_probs=296.6
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
|..+|||++++++++.++++++|.|+|++|||||||.+++||++|++++.|..+.. .+|.++|||++|+|+++| +|+
T Consensus 14 ~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~--~~P~v~GhE~~G~V~~vG-~V~ 90 (380)
T 1vj0_A 14 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV--PLPIILGHEGAGRVVEVN-GEK 90 (380)
T ss_dssp CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC--CSSBCCCCEEEEEEEEES-SCC
T ss_pred hhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCC--CCCcccCcCcEEEEEEeC-Ccc
Confidence 56789999999998559999999999999999999999999999999999865533 689999999999999999 999
Q ss_pred ------cCCCCCEEeeecccCCCCCcccc-CCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEe-
Q 016363 92 ------EVKERDLVLPIFHRDCGECRDCK-SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV- 163 (390)
Q Consensus 92 ------~~~vGd~V~~~~~~~~~~c~~c~-~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v- 163 (390)
+|++||||++.+..+|+.|.+|. .++++.|.+... .|...... ......|+|+||+++
T Consensus 91 ~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~---~g~~~~~~-----------~~~~~~G~~aey~~v~ 156 (380)
T 1vj0_A 91 RDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGCS-----------EYPHLRGCYSSHIVLD 156 (380)
T ss_dssp BCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCSS-----------STTCCCSSSBSEEEEC
T ss_pred ccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce---eccccccC-----------CCCCCCccccceEEEc
Confidence 99999999999999999999999 999999987533 22210000 000112589999999
Q ss_pred eCCceEEcCCCCCcc-hhhccccchhhHHHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHH
Q 016363 164 DITHVVKITPHIPLG-IACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241 (390)
Q Consensus 164 ~~~~v~~~p~~~~~~-~aa~~~~~~~tA~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~ 241 (390)
|++.++++|++++++ +|+.++ +++|||+++ +.++ +++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++
T Consensus 157 ~~~~~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 234 (380)
T 1vj0_A 157 PETDVLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLK 234 (380)
T ss_dssp TTCCEEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHH
T ss_pred ccceEEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHH
Confidence 999999999999999 677666 999999998 6788 999999999999999999999999999449999999999999
Q ss_pred HHHhcCCcEEEcCC---CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch
Q 016363 242 IGKKFGITDFINPA---TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 317 (390)
Q Consensus 242 ~~~~~g~~~v~~~~---~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~ 317 (390)
+++++|+++++++. + .++.+.+++++++ ++|+|||++|....++.++++++++ |+++.+|........+++.
T Consensus 235 ~~~~lGa~~vi~~~~~~~---~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~ 310 (380)
T 1vj0_A 235 LAEEIGADLTLNRRETSV---EERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKV 310 (380)
T ss_dssp HHHHTTCSEEEETTTSCH---HHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECH
T ss_pred HHHHcCCcEEEeccccCc---chHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCCeeEch
Confidence 99999999999886 4 6788899999988 9999999999876689999999999 9999999754111345665
Q ss_pred Hh-h-hcceeEEeeecCCCCchhhHHHHHHHHHc--CCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecC
Q 016363 318 IE-I-LKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 318 ~~-~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
.. + .+++++.|+..+. .++++++++++++ |++ .++++++|+|+++++|++.+.++...|+|++++
T Consensus 311 ~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvl~~~ 379 (380)
T 1vj0_A 311 YEWLVLKNATFKGIWVSD---TSHFVKTVSITSRNYQLL--SKLITHRLPLKEANKALELMESREALKVILYPE 379 (380)
T ss_dssp HHHTTTTTCEEEECCCCC---HHHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHHHHHHHHHTSCSCEEEECC
T ss_pred HHHHHhCCeEEEEeecCC---HHHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHHHHHHHhcCCCceEEEEeC
Confidence 54 3 4489999986543 6789999999999 976 566889999999999999998765449999875
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-55 Score=418.73 Aligned_cols=342 Identities=24% Similarity=0.363 Sum_probs=296.5
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
+|.+|||+++++++.+++++++|.|+|++|||+|||.+++||++|++.+.|..+.. ..+|.++|||++|+|+++|++|+
T Consensus 2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~G~E~~G~V~~vG~~v~ 80 (347)
T 2hcy_A 2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLP-VKLPLVGGHEGAGVVVGMGENVK 80 (347)
T ss_dssp CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC-CCSSEECCCEEEEEEEEECTTCC
T ss_pred CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCC-CCCCcccCccceEEEEEECCCCC
Confidence 67899999999998669999999999999999999999999999999999876532 26899999999999999999999
Q ss_pred cCCCCCEEeeeccc-CCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 92 EVKERDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 92 ~~~vGd~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+|++||||++.+.. +|+.|.+|+.++++.|.+... .|...+ |+|+||+++|++.+++
T Consensus 81 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~ 138 (347)
T 2hcy_A 81 GWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL---SGYTHD-------------------GSFQQYATADAVQAAH 138 (347)
T ss_dssp SCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE---BTTTBC-------------------CSSBSEEEEETTTSEE
T ss_pred CCcCCCEEEEecCCCCCCCChhhhCCCcccCccccc---cccCCC-------------------CcceeEEEeccccEEE
Confidence 99999999986654 599999999999999987543 233333 4899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
+|+++++++|+.+++++.|||+++ +..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++
T Consensus 139 iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~ 216 (347)
T 2hcy_A 139 IPQGTDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGE 216 (347)
T ss_dssp ECTTCCHHHHGGGGTHHHHHHHHH-HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHhhhHHHHHHHH-HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCc
Confidence 999999999999999999999988 5569999999999998 9999999999999999 999999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEe
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCG 328 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g 328 (390)
.++|..+ ..++.+.+++.+.+++|++||++|....++.+++.|+++ |+++.+|.... ...+++...+. +++++.|
T Consensus 217 ~~~d~~~--~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g 292 (347)
T 2hcy_A 217 VFIDFTK--EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAG-AKCCSDVFNQVVKSISIVG 292 (347)
T ss_dssp EEEETTT--CSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCTT-CEEEEEHHHHHHTTCEEEE
T ss_pred eEEecCc--cHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCCC-CCCCCCHHHHhhCCcEEEE
Confidence 9888763 257888888877668999999999876689999999999 99999996542 23455555444 4899999
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-eEEEEecCC
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWMDK 388 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~~~~ 388 (390)
+.... .++++++++++++|++++. + ++|+|+++++||+.+.+++. +|+|+++++
T Consensus 293 ~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 347 (347)
T 2hcy_A 293 SYVGN---RADTREALDFFARGLVKSP--I-KVVGLSTLPEIYEKMEKGQIVGRYVVDTSK 347 (347)
T ss_dssp CCCCC---HHHHHHHHHHHHTTSCCCC--E-EEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred ccCCC---HHHHHHHHHHHHhCCCccc--e-EEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence 86443 5789999999999988764 4 79999999999999988765 499999864
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-56 Score=428.02 Aligned_cols=338 Identities=20% Similarity=0.253 Sum_probs=288.0
Q ss_pred ccceeeEEEeecCCCCcEEEE--eecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEE--IEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~--~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
+|++|||+++++++.++++.+ +|.|+|++|||||||++++||++|++.+.|..+.. .+|.++|||++|+|+++|++
T Consensus 3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~GhE~~G~V~~vG~~ 80 (360)
T 1piw_A 3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM--KMPLVVGHEIVGKVVKLGPK 80 (360)
T ss_dssp TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCC--CSSEECCCCEEEEEEEECTT
T ss_pred CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCC--CCCcccCcCceEEEEEeCCC
Confidence 577899999999986799999 99999999999999999999999999999876544 68999999999999999999
Q ss_pred CC-cCCCCCEEee-ecccCCCCCccccCCCCCCCcCC--CCCCC--CCCCCCCCcccccccCceeeccccccccceeEEe
Q 016363 90 VE-EVKERDLVLP-IFHRDCGECRDCKSSKSNTCSKF--GRGYR--PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV 163 (390)
Q Consensus 90 v~-~~~vGd~V~~-~~~~~~~~c~~c~~~~~~~c~~~--~~~~~--~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v 163 (390)
|+ +|++||||+. ....+|+.|.+|+.++++.|.+. ..... .|... .|+|+||+++
T Consensus 81 v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~-------------------~G~~aey~~v 141 (360)
T 1piw_A 81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVS-------------------QGGYANYVRV 141 (360)
T ss_dssp CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBC-------------------CCSSBSEEEE
T ss_pred CCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccC-------------------CCcceeEEEE
Confidence 99 9999999954 44568999999999999999875 11000 02222 2589999999
Q ss_pred eCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 164 DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 164 ~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
|++.++++|+++++++||.+++++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++++
T Consensus 142 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~ 219 (360)
T 1piw_A 142 HEHFVVPIPENIPSHLAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDA 219 (360)
T ss_dssp EGGGEEECCTTSCHHHHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHH
T ss_pred chhheEECCCCCCHHHhhhhhhhHHHHHHHHH-HcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHH
Confidence 99999999999999999999999999999985 4899999999999999999999999999999 899999999999999
Q ss_pred HhcCCcEEEcCCCCCCc-CHHHHHHhhcCCCccEEEEcccC--hHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh
Q 016363 244 KKFGITDFINPATCGDK-TVSQVIKEMTDGGADYCFECIGL--TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 320 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~-~~~~~i~~~~~~g~D~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~ 320 (390)
+++|+++++++.+ . ++.+.+. +++|+|||++|. ...++.++++++++ |+++.+|.... . ..++...+
T Consensus 220 ~~lGa~~v~~~~~---~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~-~~~~~~~~ 289 (360)
T 1piw_A 220 MKMGADHYIATLE---EGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-H-EMLSLKPY 289 (360)
T ss_dssp HHHTCSEEEEGGG---TSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-S-CCEEECGG
T ss_pred HHcCCCEEEcCcC---chHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-c-cccCHHHH
Confidence 9999999998766 4 5655443 589999999998 55588899999999 99999997543 1 13333333
Q ss_pred -hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeecccc--HHHHHHHHhcCCce-EEEEecCC
Q 016363 321 -LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHD--INKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 321 -~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~--~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
.+++++.|+..+. .++++++++++++|++++. + ++|+|++ +++||+.+.++... |+|+++++
T Consensus 290 ~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~ 355 (360)
T 1piw_A 290 GLKAVSISYSALGS---IKELNQLLKLVSEKDIKIW--V-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD 355 (360)
T ss_dssp GCBSCEEEECCCCC---HHHHHHHHHHHHHTTCCCC--E-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred HhCCeEEEEEecCC---HHHHHHHHHHHHhCCCcce--E-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence 4488999986543 5789999999999987654 6 8999999 99999999887764 99999864
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-55 Score=419.00 Aligned_cols=336 Identities=21% Similarity=0.365 Sum_probs=294.2
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++++++.+ +++.++|.|+|++|||+|||.+++||++|++++.|..+.. ..+|.++|||++|+|+++|++|++|
T Consensus 1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~G~E~~G~V~~vG~~v~~~ 79 (343)
T 2eih_A 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPK-LPLPHVLGADGSGVVDAVGPGVEGF 79 (343)
T ss_dssp CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTT-CCSSEECCSEEEEEEEEECSSCCSC
T ss_pred CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCC-CCCCcccccceEEEEEEECCCCCCC
Confidence 799999999875 8899999999999999999999999999999999866432 2689999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||||++.+..+|+.|.+|..|+++.|.+... .|+..+ |+|+||+++|++.++++|+
T Consensus 80 ~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~---~G~~~~-------------------G~~aey~~v~~~~~~~~P~ 137 (343)
T 2eih_A 80 APGDEVVINPGLSCGRCERCLAGEDNLCPRYQI---LGEHRH-------------------GTYAEYVVLPEANLAPKPK 137 (343)
T ss_dssp CTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTTSSC-------------------CSSBSEEEEEGGGEEECCT
T ss_pred CCCCEEEECCCCCcccchhhccCcccccccccc---cCcCCC-------------------ccceeEEEeChHHeEECCC
Confidence 999999999999999999999999999987653 344333 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++++|++++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++
T Consensus 138 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~ 216 (343)
T 2eih_A 138 NLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETV 216 (343)
T ss_dssp TSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred CCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEE
Confidence 99999999999999999999866679999999999998 9999999999999999 999999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (390)
++.+ .++.+.+.+++++ ++|++||++|.. .++.++++++++ |+++.+|..... ..+++...+ .+++++.|+.
T Consensus 217 d~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~ 290 (343)
T 2eih_A 217 NYTH---PDWPKEVRRLTGGKGADKVVDHTGAL-YFEGVIKATANG-GRIAIAGASSGY-EGTLPFAHVFYRQLSILGST 290 (343)
T ss_dssp ETTS---TTHHHHHHHHTTTTCEEEEEESSCSS-SHHHHHHHEEEE-EEEEESSCCCSC-CCCCCTTHHHHTTCEEEECC
T ss_pred cCCc---ccHHHHHHHHhCCCCceEEEECCCHH-HHHHHHHhhccC-CEEEEEecCCCC-cCccCHHHHHhCCcEEEEec
Confidence 8876 6788889888877 999999999954 489999999999 999999965432 223444443 4589999875
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.. ..++++++++++++|+++ +.++++|+|+++++||+.+.++... |+++++
T Consensus 291 ~~---~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 342 (343)
T 2eih_A 291 MA---SKSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342 (343)
T ss_dssp SC---CGGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred Cc---cHHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence 33 257899999999999875 4578999999999999999887654 999986
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-54 Score=418.31 Aligned_cols=341 Identities=20% Similarity=0.207 Sum_probs=291.0
Q ss_pred CCCCCccceeeEEEeecCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 7 SPKAGKVIRCKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 7 ~~~~~~~~t~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
+...-||.+|||+++++++ +.+++.++|.|+|++|||||||++++||++|++++.|..+.. ..+|.++|||++|+|++
T Consensus 19 ~~~~~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~P~v~GhE~~G~V~~ 97 (363)
T 3uog_A 19 YFQSMMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLD-LAFPFVPASDMSGVVEA 97 (363)
T ss_dssp ----CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCC-CCSSBCCCCEEEEEEEE
T ss_pred EEeccCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCCcCcccceEEEEEE
Confidence 3444578999999999774 349999999999999999999999999999999999876532 26899999999999999
Q ss_pred eCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCC-CCCCCCCCcccccccCceeeccccccccceeEEee
Q 016363 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~ 164 (390)
+|++|++|++||||++.+.. +|..+. +.|.+...... .|...+ |+|+||+++|
T Consensus 98 vG~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~-------------------G~~aey~~v~ 151 (363)
T 3uog_A 98 VGKSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHP-------------------GVLSEYVVLP 151 (363)
T ss_dssp ECTTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSC-------------------CCCBSEEEEE
T ss_pred ECCCCCCCCCCCEEEEeccc------cccccc-cccccccccccccCcCCC-------------------CcceeEEEec
Confidence 99999999999999987643 677777 88864221111 233333 4899999999
Q ss_pred CCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 165 ~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++
T Consensus 152 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~ 230 (363)
T 3uog_A 152 EGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAF 230 (363)
T ss_dssp GGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHH
T ss_pred hHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHH
Confidence 999999999999999999999999999998788999999999999999999999999999999 9999999999999999
Q ss_pred hcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhc
Q 016363 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILK 322 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~ 322 (390)
++|++++++... .++.+.+++++++ ++|+||||+|... ++.++++++++ |+++.+|..... ..+++... +.+
T Consensus 231 ~lGa~~vi~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~ 304 (363)
T 3uog_A 231 ALGADHGINRLE---EDWVERVYALTGDRGADHILEIAGGAG-LGQSLKAVAPD-GRISVIGVLEGF-EVSGPVGPLLLK 304 (363)
T ss_dssp HHTCSEEEETTT---SCHHHHHHHHHTTCCEEEEEEETTSSC-HHHHHHHEEEE-EEEEEECCCSSC-EECCBTTHHHHT
T ss_pred HcCCCEEEcCCc---ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhhcC-CEEEEEecCCCc-ccCcCHHHHHhC
Confidence 999999998554 6899999999988 9999999999665 99999999999 999999976532 23444444 445
Q ss_pred ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 323 GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
++++.|+..+. .+++++++++++++++ +++++++|+|+++++||+.+.++..+|+||++
T Consensus 305 ~~~i~g~~~~~---~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~ 363 (363)
T 3uog_A 305 SPVVQGISVGH---RRALEDLVGAVDRLGL--KPVIDMRYKFTEVPEALAHLDRGPFGKVVIEF 363 (363)
T ss_dssp CCEEEECCCCC---HHHHHHHHHHHHHHTC--CCCEEEEEEGGGHHHHHHTGGGCCSBEEEEEC
T ss_pred CcEEEEEecCC---HHHHHHHHHHHHcCCC--ccceeeEEcHHHHHHHHHHHHcCCCccEEEeC
Confidence 99999987554 6789999999999976 45688999999999999999888844999975
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-55 Score=417.12 Aligned_cols=333 Identities=24% Similarity=0.404 Sum_probs=267.9
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
.+|||+++++++++++++++|.|+|++|||+|||++++||++|++.+.|..+.....+|.++|||++|+|+++|++ ++|
T Consensus 2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~ 80 (344)
T 2h6e_A 2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV 80 (344)
T ss_dssp EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence 4799999999986799999999999999999999999999999999998765211268999999999999999999 999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEee-CCceEEcC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITHVVKIT 172 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~v~~~p 172 (390)
++||||++.+..+|+.|.+|+.++++.|.+... .|...+ |+|+||+++| ++.++++
T Consensus 81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~-------------------G~~aey~~v~~~~~~~~i- 137 (344)
T 2h6e_A 81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQII---PGQTTN-------------------GGFSEYMLVKSSRWLVKL- 137 (344)
T ss_dssp CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC---BTTTBC-------------------CSSBSEEEESCGGGEEEE-
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCCCccc---cccccC-------------------CcceeeEEecCcccEEEe-
Confidence 999999988888999999999999999987532 333333 4899999999 9999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHH----hCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHhc
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKV----AGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKF 246 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~----~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~~ 246 (390)
+++++++||.+++++.|||+++.+. .++ +|++|||+|+|++|++++|+|+.+ |+ +|++++++++++++++++
T Consensus 138 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l 215 (344)
T 2h6e_A 138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL 215 (344)
T ss_dssp SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH
T ss_pred CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh
Confidence 9999999999999999999998554 289 999999999999999999999999 99 899999999999999999
Q ss_pred CCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcce
Q 016363 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGR 324 (390)
Q Consensus 247 g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~ 324 (390)
|+++++++.+ . .+.+.+++++ ++|+|||++|+...++.++++++++ |+++.+|.... ..+++...+ .+++
T Consensus 216 Ga~~vi~~~~---~--~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~ 287 (344)
T 2h6e_A 216 GADYVSEMKD---A--ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGK--RVSLEAFDTAVWNK 287 (344)
T ss_dssp TCSEEECHHH---H--HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHHHTTC
T ss_pred CCCEEecccc---c--hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCC--CcccCHHHHhhCCc
Confidence 9999987542 0 2234555656 8999999999986699999999999 99999997543 234555444 4589
Q ss_pred eEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-eEEEEec
Q 016363 325 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM 386 (390)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~~ 386 (390)
++.|+..+. .++++++++++++|++++. + ++|+|+++++||+.+.++.. +|+|+++
T Consensus 288 ~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 344 (344)
T 2h6e_A 288 KLLGSNYGS---LNDLEDVVRLSESGKIKPY--I-IKVPLDDINKAFTNLDEGRVDGRQVITP 344 (344)
T ss_dssp EEEECCSCC---HHHHHHHHHHHHTTSSCCC--E-EEECC----------------CEEEECC
T ss_pred EEEEEecCC---HHHHHHHHHHHHcCCCCcc--e-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence 999986543 6789999999999987654 7 99999999999999988775 4999864
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-55 Score=428.88 Aligned_cols=345 Identities=22% Similarity=0.294 Sum_probs=293.5
Q ss_pred eeeEEEeecCCCCcEEEEeecCCC-CC-----CeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPP-KA-----WEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~-~~-----~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
+|||+++++++. ++++++|.|+| ++ |||+|||.+++||++|++++.|..+ . .+|.++|||++|+|+++|+
T Consensus 2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~--~~p~v~GhE~~G~V~~vG~ 77 (398)
T 2dph_A 2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-V--PKGHVLGHEITGEVVEKGS 77 (398)
T ss_dssp CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-C--CTTCBCCCCEEEEEEEECT
T ss_pred ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-C--CCCcccCCceEEEEEEECC
Confidence 699999999875 99999999987 68 9999999999999999999998643 2 5899999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCC-----CCCCCCCCCCcccccccCceeeccccccccceeEEe
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG-----YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV 163 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~-----~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v 163 (390)
+|++|++||||++.+..+|+.|.+|++++++.|.+.... ...|+... ...|+|+||+++
T Consensus 78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~----------------~~~G~~aey~~v 141 (398)
T 2dph_A 78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLK----------------GWSGGQAEYVLV 141 (398)
T ss_dssp TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBS----------------SCCCSSBSEEEE
T ss_pred CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccC----------------CCCceeeeeEEe
Confidence 999999999999999999999999999999999872110 01121000 012689999999
Q ss_pred eCC--ceEEcCCCCCcch----hhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 164 DIT--HVVKITPHIPLGI----ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 164 ~~~--~v~~~p~~~~~~~----aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+++ .++++|+++++++ |++++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++
T Consensus 142 ~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~ 220 (398)
T 2dph_A 142 PYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNP 220 (398)
T ss_dssp SSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCH
T ss_pred ccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence 987 8999999999998 888999999999998 789999999999999999999999999999987899999999
Q ss_pred hhHHHHHhcCCcEEEcCCCCCCcCH-HHHHHhhcCC-CccEEEEcccChH--------------HHHHHHHHhccCCceE
Q 016363 238 EKFEIGKKFGITDFINPATCGDKTV-SQVIKEMTDG-GADYCFECIGLTS--------------VMNDAFNSSREGWGKT 301 (390)
Q Consensus 238 ~~~~~~~~~g~~~v~~~~~~~~~~~-~~~i~~~~~~-g~D~vid~~g~~~--------------~~~~~~~~l~~~~G~~ 301 (390)
+++++++++|++ ++++.+ .++ .+.+++++++ ++|+|||++|+.. .++.++++++++ |++
T Consensus 221 ~~~~~a~~lGa~-~i~~~~---~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~i 295 (398)
T 2dph_A 221 ERLKLLSDAGFE-TIDLRN---SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAI 295 (398)
T ss_dssp HHHHHHHTTTCE-EEETTS---SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEE
T ss_pred HHHHHHHHcCCc-EEcCCC---cchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEE
Confidence 999999999996 788766 565 8889999888 9999999999752 588999999999 999
Q ss_pred EEEcccCC-----------CCCcccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCC--CccceeeeeccccH
Q 016363 302 VILGVEMH-----------GSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELN--LGEFITHEVSFHDI 367 (390)
Q Consensus 302 v~~g~~~~-----------~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~l~~~ 367 (390)
+.+|.... ....+++...+ .+++++.|+... ..++++++++++++|+++ +.++++++|+|+++
T Consensus 296 v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~ 372 (398)
T 2dph_A 296 GIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQA 372 (398)
T ss_dssp ECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTH
T ss_pred EEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHH
Confidence 99996521 12234444443 448888876432 356789999999999998 77778899999999
Q ss_pred HHHHHHHhcCCceEEEEecCC
Q 016363 368 NKAFDLLLEGKSLRCIIWMDK 388 (390)
Q Consensus 368 ~~A~~~~~~~~~~kvvl~~~~ 388 (390)
++||+.+.++..+|+|++++.
T Consensus 373 ~~A~~~~~~~~~gKvvv~~~~ 393 (398)
T 2dph_A 373 PDGYAKFDKGSPAKFVIDPHG 393 (398)
T ss_dssp HHHHHHHHTTCSCEEEECTTS
T ss_pred HHHHHHHhcCCceEEEEecCc
Confidence 999999988766899998864
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-54 Score=414.77 Aligned_cols=335 Identities=25% Similarity=0.350 Sum_probs=293.0
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC------CCCCCCcccccceeEEEEEeCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------PKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~------~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
|||++++++++++++.++|.|+|++|||+|||.+++||++|++++.|..+. ....+|.++|||++|+|+++|++
T Consensus 1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 80 (347)
T 1jvb_A 1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE 80 (347)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence 799999999877999999999999999999999999999999999886541 01268999999999999999999
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC-Cce
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THV 168 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~v 168 (390)
|++|++||||++.+..+|+.|.+|+.++++.|.+... .|...+ |+|+||+++|+ +.+
T Consensus 81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~-------------------G~~aey~~v~~~~~~ 138 (347)
T 1jvb_A 81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFD-------------------GAYAEYVIVPHYKYM 138 (347)
T ss_dssp CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBC-------------------CSSBSEEEESCGGGE
T ss_pred CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc---ccccCC-------------------CcceeEEEecCccce
Confidence 9999999999988888999999999999999987543 233333 48999999999 999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhc
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKF 246 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~ 246 (390)
+++ +++++++|+.+++++.|||+++ +.+++++|++|||+|+ |++|++++|+++.. |+ +|+++++++++.+.++++
T Consensus 139 ~~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~ 215 (347)
T 1jvb_A 139 YKL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA 215 (347)
T ss_dssp EEC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH
T ss_pred EEe-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh
Confidence 999 9999999999999999999998 5689999999999998 59999999999999 99 899999999999999999
Q ss_pred CCcEEEcCCCCCCcCHHHHHHhhcC-CCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcce
Q 016363 247 GITDFINPATCGDKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGR 324 (390)
Q Consensus 247 g~~~v~~~~~~~~~~~~~~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~ 324 (390)
|++.++++.+ .++.+.+.+++. +++|++||++|+...++.++++++++ |+++.+|..... . +++...+ .+++
T Consensus 216 g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~-~~~~~~~~~~~~ 289 (347)
T 1jvb_A 216 GADYVINASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGAD-L-HYHAPLITLSEI 289 (347)
T ss_dssp TCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCC-C-CCCHHHHHHHTC
T ss_pred CCCEEecCCC---ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-C-CCCHHHHHhCce
Confidence 9999998876 678888888887 59999999999986689999999999 999999975412 2 4555444 4489
Q ss_pred eEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 325 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
++.|+..+. .++++++++++++|+++ ++++++|+|+++++|++.+.+++.. |+|+++
T Consensus 290 ~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 347 (347)
T 1jvb_A 290 QFVGSLVGN---QSDFLGIMRLAEAGKVK--PMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347 (347)
T ss_dssp EEEECCSCC---HHHHHHHHHHHHTTSSC--CCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred EEEEEeccC---HHHHHHHHHHHHcCCCC--ceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence 999986543 67899999999999875 4588999999999999999888764 999874
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-55 Score=420.33 Aligned_cols=341 Identities=21% Similarity=0.311 Sum_probs=283.8
Q ss_pred CCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCC
Q 016363 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
....|+|+++++.++++++++.++|.|+|++|||+|||.+++||++|++++.|..+.. .+|.++|||++|+|+++|++
T Consensus 17 ~~~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~ 94 (369)
T 1uuf_A 17 KKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT--VYPCVPGHEIVGRVVAVGDQ 94 (369)
T ss_dssp ------CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCC--CSSBCCCCCEEEEEEEECTT
T ss_pred HhcCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCC--CCCeecccCceEEEEEECCC
Confidence 3467899999999887779999999999999999999999999999999999875544 68999999999999999999
Q ss_pred CCcCCCCCEEeeeccc-CCCCCccccCCCCCCCcCCCCCCC-----CCCCCCCCcccccccCceeeccccccccceeEEe
Q 016363 90 VEEVKERDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYR-----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV 163 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~-----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v 163 (390)
|++|++||||++.+.. +|+.|.+|++|+++.|.+....+. .|... .|+|+||+++
T Consensus 95 V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~-------------------~G~~aeyv~v 155 (369)
T 1uuf_A 95 VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHT-------------------LGGYSQQIVV 155 (369)
T ss_dssp CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBC-------------------CCSSBSEEEE
T ss_pred CCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCC-------------------CCcccceEEE
Confidence 9999999999987754 699999999999999987521110 01111 2589999999
Q ss_pred eCCceEEcCCC-CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHH
Q 016363 164 DITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242 (390)
Q Consensus 164 ~~~~v~~~p~~-~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~ 242 (390)
|++.++++|++ +++++||.+++++.|||+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++
T Consensus 156 ~~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~ 233 (369)
T 1uuf_A 156 HERYVLRIRHPQEQLAAVAPLLCAGITTYSPLR-HWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREA 233 (369)
T ss_dssp EGGGCEECCSCGGGHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHH
T ss_pred cchhEEECCCCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 99999999999 999999999999999999984 5799999999999999999999999999999 89999999999999
Q ss_pred HHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-h
Q 016363 243 GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-L 321 (390)
Q Consensus 243 ~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~ 321 (390)
++++|+++++++.+ .++. .++. +++|+|||++|+...++.++++++++ |+++.+|...... .+++...+ .
T Consensus 234 a~~lGa~~vi~~~~---~~~~---~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~ 304 (369)
T 1uuf_A 234 AKALGADEVVNSRN---ADEM---AAHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPH-KSPEVFNLIM 304 (369)
T ss_dssp HHHHTCSEEEETTC---HHHH---HTTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHT
T ss_pred HHHcCCcEEecccc---HHHH---HHhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCCc-cccCHHHHHh
Confidence 99999999998866 4433 3333 58999999999876689999999999 9999999654321 13444444 4
Q ss_pred cceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-eEEEEecCC
Q 016363 322 KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWMDK 388 (390)
Q Consensus 322 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~~~~ 388 (390)
+++++.|+..+. .++++++++++++|++++. + ++|+|+++++|++.+.++.. +|+|+++++
T Consensus 305 ~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 366 (369)
T 1uuf_A 305 KRRAIAGSMIGG---IPETQEMLDFCAEHGIVAD--I-EMIRADQINEAYERMLRGDVKYRFVIDNRT 366 (369)
T ss_dssp TTCEEEECCSCC---HHHHHHHHHHHHHHTCCCC--E-EEECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred CCcEEEEeecCC---HHHHHHHHHHHHhCCCCcc--e-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 489999986543 5789999999999987754 5 57999999999999988775 499999875
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-55 Score=425.73 Aligned_cols=343 Identities=21% Similarity=0.275 Sum_probs=292.2
Q ss_pred CccceeeEEEeecCCCCcEEEEeecCC-CCCCeEEEEEeeeecccccccccccCCCC-----CCCCCCcccccceeEEEE
Q 016363 11 GKVIRCKAAICRIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDL-----PKLPLPVIFGHEAVGVVE 84 (390)
Q Consensus 11 ~~~~t~~a~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~-----~~~~~p~~~G~e~~G~V~ 84 (390)
..|.+|+++++..++. ++++++|.|+ |++|||||||.+++||++|++++.|.... ....+|.++|||++|+|+
T Consensus 26 ~~~~~m~a~~~~~~~~-l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~ 104 (404)
T 3ip1_A 26 EGKLTWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVV 104 (404)
T ss_dssp TTTBBSCGGGTEEEEE-EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEE
T ss_pred hhhhhcceEEEEeCCc-eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEE
Confidence 3445566666666554 8999999999 99999999999999999999999864211 112689999999999999
Q ss_pred EeCCCC------CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccc
Q 016363 85 SVGEYV------EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT 158 (390)
Q Consensus 85 ~vG~~v------~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a 158 (390)
++|++| ++|++||||++.+..+|+.|.+|+.|+++.|.+... .|+..+ |+|+
T Consensus 105 ~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~g~~~~-------------------G~~a 162 (404)
T 3ip1_A 105 EAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE---LGFNVD-------------------GAFA 162 (404)
T ss_dssp EECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEE---BTTTBC-------------------CSSB
T ss_pred EECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccc---cCCCCC-------------------CCCc
Confidence 999999 889999999999999999999999999999988654 344444 4899
Q ss_pred eeEEeeCCceEEcCCCCC------cchhhccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEE
Q 016363 159 EYSVVDITHVVKITPHIP------LGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKII 231 (390)
Q Consensus 159 ~~~~v~~~~v~~~p~~~~------~~~aa~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi 231 (390)
||+++|++.++++|++++ +.++++++.+++|||+++... +++++|++|||+|+|++|++++|+|+.+|+++|+
T Consensus 163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi 242 (404)
T 3ip1_A 163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVI 242 (404)
T ss_dssp SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEE
T ss_pred ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence 999999999999999886 455888888999999998655 4899999999999999999999999999998999
Q ss_pred EecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccCh-HHHHHHHHHh----ccCCceEEEEc
Q 016363 232 GVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT-SVMNDAFNSS----REGWGKTVILG 305 (390)
Q Consensus 232 ~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~-~~~~~~~~~l----~~~~G~~v~~g 305 (390)
+++++++|+++++++|+++++++.+ .++.+.+++++++ ++|+||||+|+. ..+..++++| +++ |+++.+|
T Consensus 243 ~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G 318 (404)
T 3ip1_A 243 LSEPSEVRRNLAKELGADHVIDPTK---ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVA 318 (404)
T ss_dssp EECSCHHHHHHHHHHTCSEEECTTT---SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECS
T ss_pred EECCCHHHHHHHHHcCCCEEEcCCC---CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeC
Confidence 9999999999999999999999877 7899999999988 999999999998 2467777777 999 9999999
Q ss_pred ccCCCCCcccchHhhhc-ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEE
Q 016363 306 VEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384 (390)
Q Consensus 306 ~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 384 (390)
..... .+++...+.. ++++.|+.... ..++++++++++++| +++.++++++|+|+++++||+.+. .+|+|+
T Consensus 319 ~~~~~--~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~---~GKvvl 390 (404)
T 3ip1_A 319 RADAK--IPLTGEVFQVRRAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ---TDKSLV 390 (404)
T ss_dssp CCCSC--EEECHHHHHHTTCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT---TCTTCS
T ss_pred CCCCC--CcccHHHHhccceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh---CCcEEE
Confidence 76543 4555555544 89999986432 246799999999999 998888999999999999999987 347777
Q ss_pred ecCC
Q 016363 385 WMDK 388 (390)
Q Consensus 385 ~~~~ 388 (390)
++++
T Consensus 391 ~~~~ 394 (404)
T 3ip1_A 391 KVTM 394 (404)
T ss_dssp CEEE
T ss_pred ecCC
Confidence 7654
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-54 Score=414.19 Aligned_cols=344 Identities=22% Similarity=0.327 Sum_probs=288.2
Q ss_pred CccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 11 ~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
.+||+|++++.+++.+++++.++|.|+|++|||+|||.++|||++|++.+.|..+.. .+|.++|||++|+|+++|++|
T Consensus 5 ~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~v 82 (357)
T 2cf5_A 5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMS--NYPMVPGHEVVGEVVEVGSDV 82 (357)
T ss_dssp -CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCC--CSSBCCCCEEEEEEEEECSSC
T ss_pred cCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCC--CCCeecCcceeEEEEEECCCC
Confidence 357899999998876679999999999999999999999999999999998876544 689999999999999999999
Q ss_pred CcCCCCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceE
Q 016363 91 EEVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (390)
Q Consensus 91 ~~~~vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 169 (390)
++|++||||++.+. .+|+.|.+|+.++++.|.+....+. +....| ....|+|+||+++|++.++
T Consensus 83 ~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~-~~~~~g--------------~~~~G~~aey~~v~~~~~~ 147 (357)
T 2cf5_A 83 SKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYN-DVYING--------------QPTQGGFAKATVVHQKFVV 147 (357)
T ss_dssp CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTT-SBCTTS--------------CBCCCSSBSCEEEEGGGEE
T ss_pred CCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCcccccc-ccccCC--------------CCCCCccccEEEechhhEE
Confidence 99999999987543 5899999999999999965432211 100011 0123689999999999999
Q ss_pred EcCCCCCcchhhccccchhhHHHHHHHHhCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcC
Q 016363 170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG 247 (390)
Q Consensus 170 ~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~-~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g 247 (390)
++|+++++++||.+++++.|||+++ +..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|
T Consensus 148 ~~P~~ls~~~aa~l~~~~~ta~~~l-~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lG 225 (357)
T 2cf5_A 148 KIPEGMAVEQAAPLLCAGVTVYSPL-SHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLG 225 (357)
T ss_dssp ECCSSCCHHHHTGGGTHHHHHHHHH-HHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSC
T ss_pred ECcCCCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcC
Confidence 9999999999999999999999987 567888 99999999999999999999999999 9999999999999988 899
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEE
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVC 327 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 327 (390)
+++++++.+ . +.+++++ +++|+|||++|....++.++++++++ |+++.+|....... .++...+.+++++.
T Consensus 226 a~~vi~~~~---~---~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~-~~~~~~~~~~~~i~ 296 (357)
T 2cf5_A 226 ADDYVIGSD---Q---AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINNPLQ-FLTPLLMLGRKVIT 296 (357)
T ss_dssp CSCEEETTC---H---HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSSCCC-CCHHHHHHHTCEEE
T ss_pred Cceeecccc---H---HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCCCcc-ccCHHHHhCccEEE
Confidence 999998765 2 3455554 38999999999875588999999999 99999997543221 13333344589999
Q ss_pred eeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 328 GTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
|+..+. .+++++++++++++++++. + ++|||+++++||+.+.++... |+|+++++
T Consensus 297 g~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 352 (357)
T 2cf5_A 297 GSFIGS---MKETEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG 352 (357)
T ss_dssp ECCSCC---HHHHHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred EEccCC---HHHHHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence 986543 5789999999999988764 5 799999999999999887765 99999876
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-55 Score=423.23 Aligned_cols=333 Identities=17% Similarity=0.203 Sum_probs=287.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCC---CcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL---PVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~---p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|||+++++++++++++++|.|+|++|||||||.++|||++|++++.|..+.. .+ |.++|||++| |+++|++ ++
T Consensus 1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~~~p~v~G~E~~G-V~~vG~~-~~ 76 (357)
T 2b5w_A 1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGF--PEGEDHLVLGHEAVG-VVVDPND-TE 76 (357)
T ss_dssp CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTS--CTTCSEEECCSEEEE-EEEECTT-SS
T ss_pred CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCC--CCCCCCcccCceeEE-EEEECCC-CC
Confidence 7999999998779999999999999999999999999999999999876543 56 8999999999 9999999 99
Q ss_pred CCCCCEEeeecccC--CCCCccccCCCCCCCcCCCCCCCCCC-CCCCCcccccccCceeeccccccccceeEEeeCCceE
Q 016363 93 VKERDLVLPIFHRD--CGECRDCKSSKSNTCSKFGRGYRPNM-PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (390)
Q Consensus 93 ~~vGd~V~~~~~~~--~~~c~~c~~~~~~~c~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 169 (390)
|++||||++.+..+ |+.|.+|+.++++.|.+..... .|. ..+ |+|+||+++|++.++
T Consensus 77 ~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~~~-------------------G~~aey~~v~~~~~~ 136 (357)
T 2b5w_A 77 LEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-RGIVGAH-------------------GYMSEFFTSPEKYLV 136 (357)
T ss_dssp CCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEE-ETTBEEC-------------------CSCBSEEEEEGGGEE
T ss_pred CCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccc-cCccCCC-------------------cceeeEEEEchHHeE
Confidence 99999999988888 9999999999999998754310 022 112 589999999999999
Q ss_pred EcCCCCCcchhhccccchhhHHHHHHHHhCCCCC------CEEEEEcCChHHHHH-HHHH-HHcCCCeEEEecCChh---
Q 016363 170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG------STVAIFGLGAVGLAV-AEGA-RLNRASKIIGVDINPE--- 238 (390)
Q Consensus 170 ~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g------~~VlI~Gag~vG~~a-i~la-~~~g~~~Vi~~~~~~~--- 238 (390)
++|++++ +. |+++.+++|||+++ +.+++++| ++|||+|+|++|+++ +|+| +.+|+++|++++++++
T Consensus 137 ~iP~~~~-~~-aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~ 213 (357)
T 2b5w_A 137 RIPRSQA-EL-GFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDP 213 (357)
T ss_dssp ECCGGGS-TT-GGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCH
T ss_pred ECCCCcc-hh-hhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHH
Confidence 9999999 54 55778999999998 77899999 999999999999999 9999 9999955999999999
Q ss_pred hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH
Q 016363 239 KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 318 (390)
Q Consensus 239 ~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 318 (390)
|+++++++|++++ ++.+ .++.+ ++++ ++++|+|||++|+...++.++++++++ |+++.+|.... ...+++..
T Consensus 214 ~~~~~~~lGa~~v-~~~~---~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~ 285 (357)
T 2b5w_A 214 TIDIIEELDATYV-DSRQ---TPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAG 285 (357)
T ss_dssp HHHHHHHTTCEEE-ETTT---SCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHH
T ss_pred HHHHHHHcCCccc-CCCc---cCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHH
Confidence 9999999999999 8776 67877 8877 559999999999986689999999999 99999997652 33455555
Q ss_pred hh-----hcceeEEeeecCCCCchhhHHHHHHHHHcC--CCCCccceeeeeccccHHHHHHHHhcCCceEEEEecCCC
Q 016363 319 EI-----LKGRSVCGTYFGGLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKL 389 (390)
Q Consensus 319 ~~-----~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~~~ 389 (390)
.+ .+++++.|+..+. .++++++++++++| ++ +.++++++|+|+++++|++.+ +..+|+|+++++.
T Consensus 286 ~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~~~~ 357 (357)
T 2b5w_A 286 AFHREMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEFSTV 357 (357)
T ss_dssp HHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEECCCC
T ss_pred HHhHHHHhCCeEEEEeccCC---HHHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHHHh--CCCceEEEEecCC
Confidence 54 4589999986543 67899999999999 86 667788999999999999988 4456999999863
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-54 Score=419.14 Aligned_cols=347 Identities=24% Similarity=0.318 Sum_probs=289.9
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCC-CCe------EEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPK-AWE------IRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~-~~e------vlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (390)
||||+++++++. ++++++|.|+|+ ++| |||||.+++||++|+++++|..+ . .+|.++|||++|+|+++|
T Consensus 2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~--~~p~v~GhE~~G~V~~vG 77 (398)
T 1kol_A 2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-A--QVGLVLGHEITGEVIEKG 77 (398)
T ss_dssp CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-C--CTTCBCCCCEEEEEEEEC
T ss_pred ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-C--CCCcccCcccEEEEEEEC
Confidence 599999999875 999999999997 898 99999999999999999998643 2 578999999999999999
Q ss_pred CCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCC---CCCCCCCCCcccccccCceeeccccccccceeEEee
Q 016363 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY---RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164 (390)
Q Consensus 88 ~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~---~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~ 164 (390)
++|++|++||||++.+..+|+.|.+|++|+++.|.+..... ..|+...+ ...|+|+||+++|
T Consensus 78 ~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------------~~~G~~aey~~v~ 142 (398)
T 1kol_A 78 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMG---------------DWTGGQAEYVLVP 142 (398)
T ss_dssp TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSC---------------CBCCCSBSEEEES
T ss_pred CCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCC---------------CCCceeeeEEEec
Confidence 99999999999999888899999999999999998754210 01111000 0126899999999
Q ss_pred CC--ceEEcCCCCCcch----hhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 165 IT--HVVKITPHIPLGI----ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 165 ~~--~v~~~p~~~~~~~----aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
++ .++++|+++++++ ++.++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++
T Consensus 143 ~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~ 221 (398)
T 1kol_A 143 YADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPA 221 (398)
T ss_dssp SHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred chhCeEEECCCCcchhhhcccccccccHHHHHHHHH-HHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHH
Confidence 86 8999999999988 788999999999998 5789999999999999999999999999999978999999999
Q ss_pred hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccCh---------------HHHHHHHHHhccCCceEE
Q 016363 239 KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT---------------SVMNDAFNSSREGWGKTV 302 (390)
Q Consensus 239 ~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~---------------~~~~~~~~~l~~~~G~~v 302 (390)
|+++++++|++ ++++.+ +.++.+.+++++++ ++|+|||++|+. ..++.++++++++ |+++
T Consensus 222 ~~~~a~~lGa~-~i~~~~--~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv 297 (398)
T 1kol_A 222 RLAHAKAQGFE-IADLSL--DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIG 297 (398)
T ss_dssp HHHHHHHTTCE-EEETTS--SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEE
T ss_pred HHHHHHHcCCc-EEccCC--cchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEE
Confidence 99999999997 777755 13488899999887 999999999986 2588999999999 9999
Q ss_pred EEcccCC-C----------CCcccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCC-CccceeeeeccccHHH
Q 016363 303 ILGVEMH-G----------SPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELN-LGEFITHEVSFHDINK 369 (390)
Q Consensus 303 ~~g~~~~-~----------~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~l~~~~~ 369 (390)
.+|.... . ....++...+ .+++++.++.. ...++++++++++.+|+++ ..++++++|+|+++++
T Consensus 298 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~ 374 (398)
T 1kol_A 298 IPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPR 374 (398)
T ss_dssp ECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSC---CHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHH
T ss_pred EeccccCCcccccccccccccccccHHHHhhcccEEEeccc---ChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHH
Confidence 9996521 1 1133444333 44888887632 2356788999999999888 3456789999999999
Q ss_pred HHHHHhcCCceEEEEecCC
Q 016363 370 AFDLLLEGKSLRCIIWMDK 388 (390)
Q Consensus 370 A~~~~~~~~~~kvvl~~~~ 388 (390)
||+.+.++..+|+|++++.
T Consensus 375 A~~~~~~~~~gKvvi~~~~ 393 (398)
T 1kol_A 375 GYGEFDAGVPKKFVIDPHK 393 (398)
T ss_dssp HHHHHHHTCSCEEEECTTC
T ss_pred HHHHHhCCCceEEEEEeCC
Confidence 9999987766899999865
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-53 Score=407.43 Aligned_cols=345 Identities=21% Similarity=0.352 Sum_probs=286.4
Q ss_pred CCCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC
Q 016363 8 PKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (390)
Q Consensus 8 ~~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (390)
+.+..||+++++..++..+.+++.++|.|+|++|||+|||.++|||++|++++.|..+.. .+|.++|||++|+|+++|
T Consensus 9 ~~~~~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG 86 (366)
T 1yqd_A 9 PEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFS--MYPLVPGHEIVGEVTEVG 86 (366)
T ss_dssp HHHHSSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCC--CSSBCCCCCEEEEEEEEC
T ss_pred cchhCCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCC--CCCEecccceEEEEEEEC
Confidence 333456777777776665669999999999999999999999999999999998866544 689999999999999999
Q ss_pred CCCCcCCCCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC
Q 016363 88 EYVEEVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 166 (390)
Q Consensus 88 ~~v~~~~vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 166 (390)
++|++|++||||++.+. .+|+.|.+|+.++++.|.+....+. +....| ....|+|+||+++|++
T Consensus 87 ~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~-~~~~~g--------------~~~~G~~aey~~v~~~ 151 (366)
T 1yqd_A 87 SKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYA-SIYHDG--------------TITYGGYSNHMVANER 151 (366)
T ss_dssp TTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSS-SBCTTS--------------CBCCCSSBSEEEEEGG
T ss_pred CCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCccccccc-ccccCC--------------CcCCCccccEEEEchh
Confidence 99999999999987543 5899999999999999965432211 110011 0123689999999999
Q ss_pred ceEEcCCCCCcchhhccccchhhHHHHHHHHhCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-
Q 016363 167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK- 244 (390)
Q Consensus 167 ~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~-~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~- 244 (390)
.++++|+++++++||.+++++.|||+++ +..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus 152 ~~~~~P~~ls~~~aa~l~~~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~ 229 (366)
T 1yqd_A 152 YIIRFPDNMPLDGGAPLLCAGITVYSPL-KYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALK 229 (366)
T ss_dssp GCEECCTTSCTTTTGGGGTHHHHHHHHH-HHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHH
T ss_pred hEEECCCCCCHHHhhhhhhhHHHHHHHH-HhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 9999999999999999999999999987 557888 99999999999999999999999999 9999999999999887
Q ss_pred hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-c
Q 016363 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-G 323 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~ 323 (390)
++|+++++++.+ . +.+++++ +++|+|||++|....++.++++++++ |+++.+|.... ..+++...+.. +
T Consensus 230 ~lGa~~v~~~~~---~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~ 299 (366)
T 1yqd_A 230 NFGADSFLVSRD---Q---EQMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEK--PLELPAFSLIAGR 299 (366)
T ss_dssp TSCCSEEEETTC---H---HHHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSS--CEEECHHHHHTTT
T ss_pred hcCCceEEeccC---H---HHHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCC--CCCcCHHHHHhCC
Confidence 899999998765 2 3455555 38999999999875588999999999 99999996543 23455544444 8
Q ss_pred eeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 324 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 324 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
+++.|+..+. .+++.+++++++++++++. + ++|+|+++++||+.+.++... |+|++++
T Consensus 300 ~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 358 (366)
T 1yqd_A 300 KIVAGSGIGG---MKETQEMIDFAAKHNITAD--I-EVISTDYLNTAMERLAKNDVRYRFVIDVG 358 (366)
T ss_dssp CEEEECCSCC---HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred cEEEEecCCC---HHHHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence 9999986543 5689999999999988764 5 799999999999999888764 9999875
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-52 Score=400.78 Aligned_cols=321 Identities=19% Similarity=0.203 Sum_probs=279.9
Q ss_pred CCCCccceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 8 PKAGKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 8 ~~~~~~~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
.+..+|.||||+++.+++++ +++.++|.|+|++|||+|||.+++||++|++.+.|..+.. ..+|.++|||++|+|++
T Consensus 21 ~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~i~G~E~~G~V~~ 99 (353)
T 4dup_A 21 QSMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPP-KDASPILGLELSGEIVG 99 (353)
T ss_dssp --CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCC-TTSCSSSCCEEEEEEEE
T ss_pred ecCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC-CCCCCccccccEEEEEE
Confidence 45568999999999998765 8999999999999999999999999999999999976644 25799999999999999
Q ss_pred eCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
+|++|++|++||||++... .|+|+||+++|+
T Consensus 100 vG~~v~~~~vGdrV~~~~~-------------------------------------------------~G~~aey~~v~~ 130 (353)
T 4dup_A 100 VGPGVSGYAVGDKVCGLAN-------------------------------------------------GGAYAEYCLLPA 130 (353)
T ss_dssp ECTTCCSCCTTCEEEEECS-------------------------------------------------SCCSBSEEEEEG
T ss_pred ECCCCCCCCCCCEEEEecC-------------------------------------------------CCceeeEEEEcH
Confidence 9999999999999987532 158999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
+.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++
T Consensus 131 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~ 209 (353)
T 4dup_A 131 GQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACE 209 (353)
T ss_dssp GGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred HHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999888899999999999976 9999999999999999 9999999999999999
Q ss_pred hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcc
Q 016363 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKG 323 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~ 323 (390)
++|++.++++.+ .++.+.+++++++++|++|||+|+.. ++.++++++++ |+++.+|.........++...+ .++
T Consensus 210 ~lGa~~~~~~~~---~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~ 284 (353)
T 4dup_A 210 RLGAKRGINYRS---EDFAAVIKAETGQGVDIILDMIGAAY-FERNIASLAKD-GCLSIIAFLGGAVAEKVNLSPIMVKR 284 (353)
T ss_dssp HHTCSEEEETTT---SCHHHHHHHHHSSCEEEEEESCCGGG-HHHHHHTEEEE-EEEEECCCTTCSEEEEEECHHHHHTT
T ss_pred hcCCCEEEeCCc---hHHHHHHHHHhCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEEecCCCcccCCCHHHHHhcC
Confidence 999999999877 78999999988449999999999876 89999999999 9999999654332211444444 459
Q ss_pred eeEEeeecCCCCch-------hhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 324 RSVCGTYFGGLKPR-------SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 324 ~~i~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+++.|+........ +.++++++++++|+++ ++++++|+|+++++|++.+.++... |+|+++
T Consensus 285 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 353 (353)
T 4dup_A 285 LTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVA--PVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353 (353)
T ss_dssp CEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred ceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCcc--CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 99999987665431 1277899999999765 4688999999999999999988765 999975
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-51 Score=391.48 Aligned_cols=316 Identities=21% Similarity=0.221 Sum_probs=277.0
Q ss_pred CccceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 11 GKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 11 ~~~~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
.+|.+|||+++++++++ ++++++|.|+|++|||+|||.++|||++|++++.|..+. .+|.++|||++|+|+++|+
T Consensus 4 ~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~---~~P~i~G~e~~G~V~~vG~ 80 (334)
T 3qwb_A 4 TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC---EKPYVLGREASGTVVAKGK 80 (334)
T ss_dssp -CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC---CSSEECCSEEEEEEEEECT
T ss_pred CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCccccceEEEEEEECC
Confidence 37899999999999876 899999999999999999999999999999999987652 5899999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEee-CCc
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITH 167 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~ 167 (390)
+|++|++||||++... |+|+||++++ ++.
T Consensus 81 ~v~~~~~GdrV~~~~~--------------------------------------------------G~~aey~~v~~~~~ 110 (334)
T 3qwb_A 81 GVTNFEVGDQVAYISN--------------------------------------------------STFAQYSKISSQGP 110 (334)
T ss_dssp TCCSCCTTCEEEEECS--------------------------------------------------SCSBSEEEEETTSS
T ss_pred CCCCCCCCCEEEEeeC--------------------------------------------------CcceEEEEecCcce
Confidence 9999999999986421 5899999999 999
Q ss_pred eEEcCCCCCcch---hhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 168 VVKITPHIPLGI---ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 168 v~~~p~~~~~~~---aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
++++|+++++++ |+++++.+.|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.+
T Consensus 111 ~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~ 189 (334)
T 3qwb_A 111 VMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIA 189 (334)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred EEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 999999999999 88888899999999877789999999999996 9999999999999999 999999999999999
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL- 321 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~- 321 (390)
+++|+++++++.+ .++.+.+++++++ ++|+||||+|+.. ++.++++++++ |+++.+|..... ..+++...+.
T Consensus 190 ~~~ga~~~~~~~~---~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~ 263 (334)
T 3qwb_A 190 KEYGAEYLINASK---EDILRQVLKFTNGKGVDASFDSVGKDT-FEISLAALKRK-GVFVSFGNASGL-IPPFSITRLSP 263 (334)
T ss_dssp HHTTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEECCGGGG-HHHHHHHEEEE-EEEEECCCTTCC-CCCBCGGGGTT
T ss_pred HHcCCcEEEeCCC---chHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhccC-CEEEEEcCCCCC-CCCcchhhhhh
Confidence 9999999999887 7899999999987 9999999999855 99999999999 999999965432 2234444443
Q ss_pred cceeEEeeecCCCC-ch----hhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 322 KGRSVCGTYFGGLK-PR----SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 322 ~~~~i~g~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
+++++.++.++.+. .. +.++++++++++|++++. ++++|+++++++||+.+.++... |+++++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q 334 (334)
T 3qwb_A 264 KNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ 334 (334)
T ss_dssp TTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred CceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 48888877554432 22 235789999999988875 88999999999999999988775 99999864
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-52 Score=395.56 Aligned_cols=317 Identities=21% Similarity=0.243 Sum_probs=273.2
Q ss_pred ccceeeEEEeecCCCC---cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 12 KVIRCKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
|+++|||++++++++| ++++++|.|+|++|||+|||+++|||++|++++.|..+.. ..+|.++|||++|+|+++|+
T Consensus 1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~i~G~E~~G~V~~vG~ 79 (340)
T 3gms_A 1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHR-IPLPNIPGYEGVGIVENVGA 79 (340)
T ss_dssp -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTT-SCSSBCCCSCCEEEEEEECT
T ss_pred CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCC-CCCCCcCCcceEEEEEEeCC
Confidence 5689999999999987 8999999999999999999999999999999999976543 26899999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
+|++|++||||++... .|+|+||+++|++.+
T Consensus 80 ~v~~~~vGdrV~~~~~-------------------------------------------------~G~~aey~~v~~~~~ 110 (340)
T 3gms_A 80 FVSRELIGKRVLPLRG-------------------------------------------------EGTWQEYVKTSADFV 110 (340)
T ss_dssp TSCGGGTTCEEEECSS-------------------------------------------------SCSSBSEEEEEGGGE
T ss_pred CCCCCCCCCEEEecCC-------------------------------------------------CccceeEEEcCHHHe
Confidence 9999999999986421 158999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
+++|+++++++||++++..+|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|
T Consensus 111 ~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lg 189 (340)
T 3gms_A 111 VPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLG 189 (340)
T ss_dssp EECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHT
T ss_pred EECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999999999999988999999999999998 6999999999999999 9999999999999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh--cce
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL--KGR 324 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~ 324 (390)
+++++++.+ .++.+.+++++++ ++|+||||+|+.. ...++++++++ |+++.+|..... . ++...+. .++
T Consensus 190 a~~~~~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~-~--~~~~~~~~~~~~ 261 (340)
T 3gms_A 190 AAYVIDTST---APLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSGI-Q--VNWAEIVTKAKV 261 (340)
T ss_dssp CSEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTSC-C--CCHHHHHHTSCC
T ss_pred CcEEEeCCc---ccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCC-CEEEEEeecCCC-C--CCHHHhhhcccc
Confidence 999999877 7899999999988 9999999999887 66677999999 999999975432 2 2222222 244
Q ss_pred eEEeeecCCC-------CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC-c-eEEEEecCC
Q 016363 325 SVCGTYFGGL-------KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRCIIWMDK 388 (390)
Q Consensus 325 ~i~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~kvvl~~~~ 388 (390)
.+....+..+ ...++++++++++++|++++.. ++++|+|+++++||+.+.+++ . +|+++++.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~ 333 (340)
T 3gms_A 262 HANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE 333 (340)
T ss_dssp EEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred eEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence 4443322111 1246789999999999998765 679999999999999999886 4 599999875
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-51 Score=397.11 Aligned_cols=328 Identities=16% Similarity=0.170 Sum_probs=272.3
Q ss_pred CCCCccceeeEEEeecCCCCcEEE-EeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEe
Q 016363 8 PKAGKVIRCKAAICRIPGKPLVIE-EIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 86 (390)
Q Consensus 8 ~~~~~~~t~~a~~~~~~~~~~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v 86 (390)
++..+|.+|||+++++++. ++++ ++|.|+|++|||+|||.+++||++|++++.+. . .+|.++|||++|+|+++
T Consensus 4 ~tm~~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~--~~p~v~G~e~~G~V~~v 77 (371)
T 3gqv_A 4 QPFIPPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---A--TPWAFLGTDYAGTVVAV 77 (371)
T ss_dssp CCCCCCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------C--CTTSCCCSEEEEEEEEE
T ss_pred CCCCCchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---C--CCCccCccccEEEEEEe
Confidence 4466889999999999976 9998 99999999999999999999999999998763 2 56899999999999999
Q ss_pred CCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC
Q 016363 87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 166 (390)
Q Consensus 87 G~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 166 (390)
|++|++|++||||++. |..|..+. ..+ |+|+||++++++
T Consensus 78 G~~v~~~~~GdrV~~~-------~~~~~~~~---------------~~~-------------------G~~aey~~v~~~ 116 (371)
T 3gqv_A 78 GSDVTHIQVGDRVYGA-------QNEMCPRT---------------PDQ-------------------GAFSQYTVTRGR 116 (371)
T ss_dssp CTTCCSCCTTCEEEEE-------CCTTCTTC---------------TTC-------------------CSSBSEEECCTT
T ss_pred CCCCCCCCCCCEEEEe-------ccCCCCCC---------------CCC-------------------CcCcCeEEEchh
Confidence 9999999999999764 34443321 112 589999999999
Q ss_pred ceEEcCCCCCcchhhccccchhhHHHHHHHH-hCC-----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe
Q 016363 167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKV-AGV-----------EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 167 ~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~-~~~-----------~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 233 (390)
.++++|+++++++|+++++++.|||+++.+. .++ ++|++|||+|+ |++|++++|+|+.+|+ +||++
T Consensus 117 ~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~ 195 (371)
T 3gqv_A 117 VWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT 195 (371)
T ss_dssp CEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred heEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEE
Confidence 9999999999999999999999999999777 553 89999999998 9999999999999999 99999
Q ss_pred cCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHh-ccCCceEEEEcccCCC--
Q 016363 234 DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS-REGWGKTVILGVEMHG-- 310 (390)
Q Consensus 234 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~-- 310 (390)
. +++|+++++++|+++++++.+ .++.+.+++++++++|+||||+|+...++.+++++ +++ |+++.+|.....
T Consensus 196 ~-~~~~~~~~~~lGa~~vi~~~~---~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~ 270 (371)
T 3gqv_A 196 C-SPHNFDLAKSRGAEEVFDYRA---PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAA 270 (371)
T ss_dssp E-CGGGHHHHHHTTCSEEEETTS---TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---
T ss_pred e-CHHHHHHHHHcCCcEEEECCC---chHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccc
Confidence 7 899999999999999999887 78999999999889999999999987799999999 578 999999954321
Q ss_pred --CCcccc----hHhhhcceeEEeeecCCCCc------hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC
Q 016363 311 --SPISLN----SIEILKGRSVCGTYFGGLKP------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 378 (390)
Q Consensus 311 --~~~~~~----~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~ 378 (390)
...+.. ...+.+++++.|+....... .+.++++++++++|++++...+++.|+|+++++||+.+.+++
T Consensus 271 ~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~ 350 (371)
T 3gqv_A 271 TRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGE 350 (371)
T ss_dssp CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTC
T ss_pred cccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCC
Confidence 112211 12234478887774433221 123458889999999999988888899999999999999886
Q ss_pred c-e-EEEEecCC
Q 016363 379 S-L-RCIIWMDK 388 (390)
Q Consensus 379 ~-~-kvvl~~~~ 388 (390)
. + |+|+++++
T Consensus 351 ~~Gkkvvv~~~~ 362 (371)
T 3gqv_A 351 LSGEKLVVRLEG 362 (371)
T ss_dssp CSSCEEEEEECC
T ss_pred CceEEEEEEeCC
Confidence 5 4 88888775
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-52 Score=410.79 Aligned_cols=346 Identities=15% Similarity=0.149 Sum_probs=286.5
Q ss_pred CCccceeeEEEeecCC-------------CCcEEEEeecCCCCCCeEEEEEeeeecccccccccc---------------
Q 016363 10 AGKVIRCKAAICRIPG-------------KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK--------------- 61 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~-------------~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~--------------- 61 (390)
..+|.||||+++++++ ++++++++|.|+|++|||+|||.++|||++|++...
T Consensus 19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~ 98 (447)
T 4a0s_A 19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNAR 98 (447)
T ss_dssp SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHT
T ss_pred cCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcc
Confidence 3689999999999997 249999999999999999999999999999985432
Q ss_pred -cCCCCCCCCCC-cccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcc
Q 016363 62 -SSTDLPKLPLP-VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSR 139 (390)
Q Consensus 62 -g~~~~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~ 139 (390)
|.+... ..+| .++|||++|+|+++|++|++|++||||++.+...|+.|. |..+..+.|.+... .|+..+
T Consensus 99 ~g~~~~~-~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~---~G~~~~---- 169 (447)
T 4a0s_A 99 QGGWATR-HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRA---WGFETN---- 169 (447)
T ss_dssp TCGGGGG-GCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEE---TTTTSS----
T ss_pred cCccccc-cCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-cccccccccccccc---ccccCC----
Confidence 111111 1467 699999999999999999999999999998888777766 55577889977554 344332
Q ss_pred cccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHH--HhCCCCCCEEEEEcC-ChHHH
Q 016363 140 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGL-GAVGL 216 (390)
Q Consensus 140 ~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~--~~~~~~g~~VlI~Ga-g~vG~ 216 (390)
.|+|+||+++|++.++++|+++++++||.+++++.|||+++.. .+++++|++|||+|+ |++|+
T Consensus 170 --------------~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~ 235 (447)
T 4a0s_A 170 --------------FGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGS 235 (447)
T ss_dssp --------------SCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHH
T ss_pred --------------CCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHH
Confidence 1589999999999999999999999999999999999998864 389999999999998 99999
Q ss_pred HHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC---------------cCHHHHHHhhcCCCccEEEEcc
Q 016363 217 AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD---------------KTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 217 ~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~---------------~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+++|+|+.+|+ +||+++++++++++++++|+++++++.+.+. ..+.+.+++++++++|+|||++
T Consensus 236 ~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~ 314 (447)
T 4a0s_A 236 YAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHT 314 (447)
T ss_dssp HHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECS
T ss_pred HHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECC
Confidence 99999999999 9999999999999999999999987654110 0136778888844999999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceee
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITH 360 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 360 (390)
|... ++.++++++++ |+++.+|.... ....++...+ .+++++.|+.... .+++.++++++++|+++ +++++
T Consensus 315 G~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~ 386 (447)
T 4a0s_A 315 GRVT-FGLSVIVARRG-GTVVTCGSSSG-YLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVV--PAMSA 386 (447)
T ss_dssp CHHH-HHHHHHHSCTT-CEEEESCCTTC-SEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCEEE
T ss_pred CchH-HHHHHHHHhcC-CEEEEEecCCC-cccccCHHHHHhCCCEEEecCCCC---HHHHHHHHHHHHcCCcc--cceeE
Confidence 9865 89999999999 99999996543 2334444433 4488999986554 46788999999999875 46889
Q ss_pred eeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 361 EVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 361 ~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
+|+|+++++||+.+.++... |+++.+.
T Consensus 387 ~~~l~~~~~A~~~~~~~~~~GKvvv~~~ 414 (447)
T 4a0s_A 387 VYPLAEAAEACRVVQTSRQVGKVAVLCM 414 (447)
T ss_dssp EEEGGGHHHHHHHHHTTCCSSEEEEESS
T ss_pred EEcHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 99999999999999888775 9988874
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-52 Score=409.27 Aligned_cols=348 Identities=17% Similarity=0.155 Sum_probs=289.9
Q ss_pred CCccceeeEEEeecCC---------------CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC--------
Q 016363 10 AGKVIRCKAAICRIPG---------------KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------- 66 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~---------------~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-------- 66 (390)
...|.||||+++++++ ++++++++|.|+|++|||||||.++|||++|++...+....
T Consensus 25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~ 104 (456)
T 3krt_A 25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY 104 (456)
T ss_dssp SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHH
T ss_pred CCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhc
Confidence 3578999999999872 34999999999999999999999999999998765332100
Q ss_pred -------CCCCCC-cccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCc
Q 016363 67 -------PKLPLP-VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTS 138 (390)
Q Consensus 67 -------~~~~~p-~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~ 138 (390)
....+| .++|||++|+|+++|++|++|++||+|++.+ ..|..|..|..+..+.|.+... .|+..+
T Consensus 105 g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-~~c~~~~~~~~~~~~~c~~~~~---~G~~~~--- 177 (456)
T 3krt_A 105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHC-LSVELESSDGHNDTMLDPEQRI---WGFETN--- 177 (456)
T ss_dssp HTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECC-EECCCCSGGGTTSGGGCTTCEE---TTTTSS---
T ss_pred cccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeC-CcccccccccccccccCccccc---cccCCC---
Confidence 001467 6999999999999999999999999999854 4688899999999999987554 344332
Q ss_pred ccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHH--hCCCCCCEEEEEcC-ChHH
Q 016363 139 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGL-GAVG 215 (390)
Q Consensus 139 ~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~--~~~~~g~~VlI~Ga-g~vG 215 (390)
.|+|+||++++++.++++|+++++++||++++++.|||+++... +++++|++|||+|+ |++|
T Consensus 178 ---------------~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG 242 (456)
T 3krt_A 178 ---------------FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLG 242 (456)
T ss_dssp ---------------SCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHH
T ss_pred ---------------CCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHH
Confidence 25899999999999999999999999999999999999988654 78999999999998 9999
Q ss_pred HHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC--------------cCHHHHHHhhcCC-CccEEEEc
Q 016363 216 LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD--------------KTVSQVIKEMTDG-GADYCFEC 280 (390)
Q Consensus 216 ~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~--------------~~~~~~i~~~~~~-g~D~vid~ 280 (390)
++++|+|+.+|+ +||+++++++|+++++++|++.++++.+.+. ..+.+.+++++++ ++|+||||
T Consensus 243 ~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~ 321 (456)
T 3krt_A 243 SYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEH 321 (456)
T ss_dssp HHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEEC
T ss_pred HHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEc
Confidence 999999999999 9999999999999999999999999876111 0234888888887 99999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCcccee
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT 359 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 359 (390)
+|+.. +..++++++++ |+++.+|.... ...+++...+ .+++++.|+..+. .+++.++++++++|+++ +.++
T Consensus 322 ~G~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~ 393 (456)
T 3krt_A 322 PGRET-FGASVFVTRKG-GTITTCASTSG-YMHEYDNRYLWMSLKRIIGSHFAN---YREAWEANRLIAKGRIH--PTLS 393 (456)
T ss_dssp SCHHH-HHHHHHHEEEE-EEEEESCCTTC-SEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCEE
T ss_pred CCchh-HHHHHHHhhCC-cEEEEEecCCC-cccccCHHHHHhcCeEEEEeccCC---HHHHHHHHHHHHcCCcc--ccee
Confidence 99854 99999999999 99999996543 2334444433 3478999987655 46677899999999876 4588
Q ss_pred eeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 360 HEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 360 ~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
++|+|+++++|++.+.++... |++|.+.+
T Consensus 394 ~~~~l~~~~eA~~~l~~~~~~GKvvv~~~~ 423 (456)
T 3krt_A 394 KVYSLEDTGQAAYDVHRNLHQGKVGVLCLA 423 (456)
T ss_dssp EEEEGGGHHHHHHHHHTTCSSSEEEEESSC
T ss_pred EEEcHHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence 999999999999999888775 99888643
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-51 Score=391.71 Aligned_cols=317 Identities=21% Similarity=0.272 Sum_probs=269.1
Q ss_pred CCCCccceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 8 PKAGKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 8 ~~~~~~~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
+...+|.+|||+++.+++++ +++.++|.|+|++|||+|||.++|||++|++++.|..+.. ..+|.++|||++|+|++
T Consensus 14 ~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~G~E~~G~V~~ 92 (342)
T 4eye_A 14 AQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLK-MEPPFVPGIETAGVVRS 92 (342)
T ss_dssp ----CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSC-CCSSBCCCSEEEEEEEE
T ss_pred ccccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCCCccceeEEEEEEE
Confidence 56678999999999998766 9999999999999999999999999999999999976543 26899999999999999
Q ss_pred eCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
+|++++ |++||||++... .|+|+||+++++
T Consensus 93 vG~~v~-~~vGDrV~~~~~-------------------------------------------------~G~~aey~~v~~ 122 (342)
T 4eye_A 93 APEGSG-IKPGDRVMAFNF-------------------------------------------------IGGYAERVAVAP 122 (342)
T ss_dssp CCTTSS-CCTTCEEEEECS-------------------------------------------------SCCSBSEEEECG
T ss_pred ECCCCC-CCCCCEEEEecC-------------------------------------------------CCcceEEEEEcH
Confidence 999999 999999987532 158999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
+.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++
T Consensus 123 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~ 201 (342)
T 4eye_A 123 SNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVK 201 (342)
T ss_dssp GGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHH
T ss_pred HHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999988999999999999998 9999999999999999 9999999999999999
Q ss_pred hcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhc
Q 016363 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILK 322 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~ 322 (390)
++|++.++++.+ ++.+.+++++++ ++|+||||+|+.. +..++++++++ |+++.+|..... ...++... +.+
T Consensus 202 ~~ga~~v~~~~~----~~~~~v~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~ 274 (342)
T 4eye_A 202 SVGADIVLPLEE----GWAKAVREATGGAGVDMVVDPIGGPA-FDDAVRTLASE-GRLLVVGFAAGG-IPTIKVNRLLLR 274 (342)
T ss_dssp HHTCSEEEESST----THHHHHHHHTTTSCEEEEEESCC--C-HHHHHHTEEEE-EEEEEC-----------CCCCGGGT
T ss_pred hcCCcEEecCch----hHHHHHHHHhCCCCceEEEECCchhH-HHHHHHhhcCC-CEEEEEEccCCC-CCccCHHHHhhc
Confidence 999999998764 789999999988 9999999999876 89999999999 999999965432 12233322 445
Q ss_pred ceeEEeeecCCCC------chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 323 GRSVCGTYFGGLK------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 323 ~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
++++.|+..+.+. ..+.++++++++++| + .++++++|+|+++++||+.+.++... |+|+++
T Consensus 275 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P 342 (342)
T 4eye_A 275 NASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-M--RPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342 (342)
T ss_dssp TCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-C--CCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred CCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-C--CCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 8999998654321 135688999999999 4 45688999999999999999988876 999874
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-52 Score=403.68 Aligned_cols=332 Identities=19% Similarity=0.293 Sum_probs=277.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCC-CeEEEEEeeeeccccccccccc--CCCCCCCCC---CcccccceeEEEEEeCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKA-WEIRIKILCTSLCHSDVTFWKS--STDLPKLPL---PVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g--~~~~~~~~~---p~~~G~e~~G~V~~vG~~ 89 (390)
|||+++++++.+++++++|.|+|++ |||+|||.++|||++|++++.| ..+.. .+ |.++|||++|+|++ ++
T Consensus 1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~--~~~~~p~v~G~E~~G~V~~--~~ 76 (366)
T 2cdc_A 1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTL--PKGKDFLVLGHEAIGVVEE--SY 76 (366)
T ss_dssp CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC---------CCSCEECCSEEEEEECS--CC
T ss_pred CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCC--CcCCCCCcCCcceEEEEEe--CC
Confidence 7999999998779999999999999 9999999999999999999998 54423 46 99999999999999 67
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCC-CCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
++|++||||++.+..+|+.|.+|+.|+++.|.+..... .|.. .+ |+|+||++++++.+
T Consensus 77 -~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~~~-------------------G~~aey~~v~~~~~ 135 (366)
T 2cdc_A 77 -HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGE-AGIHKMD-------------------GFMREWWYDDPKYL 135 (366)
T ss_dssp -SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEE-ETTBEEC-------------------CSCBSEEEECGGGE
T ss_pred -CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCccc-CCccCCC-------------------CceeEEEEechHHe
Confidence 88999999999999999999999999999998754310 0222 22 58999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHH--H--HhCCC--C-------CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAW--K--VAGVE--V-------GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~--~--~~~~~--~-------g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
+++|++++ ++|+ ++.++.|||+++. + .++++ + |++|||+|+|++|++++|+|+.+|+ +|+++++
T Consensus 136 ~~iP~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~ 212 (366)
T 2cdc_A 136 VKIPKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANR 212 (366)
T ss_dssp EEECGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEES
T ss_pred EECcCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 99999999 7765 6678999999986 4 78898 8 9999999999999999999999999 9999999
Q ss_pred Ch---hhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHH-HHHHHHhccCCceEEEEcccCCCC
Q 016363 236 NP---EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILGVEMHGS 311 (390)
Q Consensus 236 ~~---~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~~~ 311 (390)
++ ++.++++++|++.+ + .+ ++.+.+.+ +++++|+|||++|....+ +.+++.|+++ |+++.+|.....
T Consensus 213 ~~~~~~~~~~~~~~ga~~v-~-~~----~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~- 283 (366)
T 2cdc_A 213 REPTEVEQTVIEETKTNYY-N-SS----NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSG- 283 (366)
T ss_dssp SCCCHHHHHHHHHHTCEEE-E-CT----TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCSC-
T ss_pred CccchHHHHHHHHhCCcee-c-hH----HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCCC-
Confidence 98 89999999999988 6 33 56667766 446899999999997658 8999999998 999999975432
Q ss_pred CcccchHh----hhcceeEEeeecCCCCchhhHHHHHHHHHcCCCC----CccceeeeeccccHHHHHHH--HhcCCceE
Q 016363 312 PISLNSIE----ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELN----LGEFITHEVSFHDINKAFDL--LLEGKSLR 381 (390)
Q Consensus 312 ~~~~~~~~----~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~l~~~~~A~~~--~~~~~~~k 381 (390)
..+++... +.+++++.|+..+. .++++++++++++|+++ +.++++++|+|+++++||+. +.++..+|
T Consensus 284 ~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gK 360 (366)
T 2cdc_A 284 SVPLDYKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIK 360 (366)
T ss_dssp EEEEEHHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCE
T ss_pred ccccChhhhHHHHhcCcEEEEecCCC---HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceE
Confidence 24455544 34589999986442 67899999999999877 77888899999999999999 55444459
Q ss_pred EEEecC
Q 016363 382 CIIWMD 387 (390)
Q Consensus 382 vvl~~~ 387 (390)
+|++++
T Consensus 361 vvi~~~ 366 (366)
T 2cdc_A 361 IRILWE 366 (366)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 999874
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-51 Score=391.78 Aligned_cols=317 Identities=19% Similarity=0.287 Sum_probs=264.4
Q ss_pred cceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 13 VIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 13 ~~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
+|+|||+++++++++ +++.++|.|+|++|||+|||.+++||++|++++.|..+.. ..+|.++|||++|+|+++|++|
T Consensus 1 sm~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~G~e~~G~V~~vG~~v 79 (349)
T 4a27_A 1 SMEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNP-PKTPLVPGFECSGIVEALGDSV 79 (349)
T ss_dssp CCCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC-CCSSBCCCSEEEEEEEEECTTC
T ss_pred CceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCC-CCCCccccceeEEEEEEeCCCC
Confidence 479999999999864 8999999999999999999999999999999999986543 2789999999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
++|++||||++... .|+|+||++++++.+++
T Consensus 80 ~~~~~GdrV~~~~~-------------------------------------------------~G~~aey~~v~~~~~~~ 110 (349)
T 4a27_A 80 KGYEIGDRVMAFVN-------------------------------------------------YNAWAEVVCTPVEFVYK 110 (349)
T ss_dssp CSCCTTCEEEEECS-------------------------------------------------SCCSBSEEEEEGGGEEE
T ss_pred CCCCCCCEEEEecC-------------------------------------------------CCcceEEEEecHHHeEE
Confidence 99999999987532 15899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
+|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|..+|++++ ++++.+.++ +|++
T Consensus 111 iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~ 188 (349)
T 4a27_A 111 IPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVT 188 (349)
T ss_dssp CCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCc
Confidence 99999999999999999999999988899999999999998 99999999999999654899988 678888888 9999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCC---------------Ccc
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---------------PIS 314 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---------------~~~ 314 (390)
++++ .+ .++.+.+++++++++|+||||+|+.. .+.++++++++ |+++.+|...... ...
T Consensus 189 ~~~~-~~---~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~ 262 (349)
T 4a27_A 189 HLFD-RN---ADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEK 262 (349)
T ss_dssp EEEE-TT---SCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC------------------------
T ss_pred EEEc-CC---ccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccc
Confidence 9998 55 68999999988779999999999987 68999999999 9999999643211 112
Q ss_pred cchHhhhc-ceeEEeeecCCCC--------chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 315 LNSIEILK-GRSVCGTYFGGLK--------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 315 ~~~~~~~~-~~~i~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
+++..+.. +.++.|+....+. ..++++++++++++|+++ ++++++|+|+++++|++.+.++... |+|+
T Consensus 263 ~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi 340 (349)
T 4a27_A 263 VNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRGNIGKLIL 340 (349)
T ss_dssp -CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTCCSSEEEE
T ss_pred cCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCCCCceEEE
Confidence 34444444 8888887643211 156789999999999875 5688999999999999999988776 9999
Q ss_pred ecCCC
Q 016363 385 WMDKL 389 (390)
Q Consensus 385 ~~~~~ 389 (390)
++++.
T Consensus 341 ~~~~~ 345 (349)
T 4a27_A 341 DVEKT 345 (349)
T ss_dssp ETTCC
T ss_pred ecCCC
Confidence 98763
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-50 Score=385.92 Aligned_cols=324 Identities=19% Similarity=0.233 Sum_probs=271.8
Q ss_pred CCCCccceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 8 PKAGKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 8 ~~~~~~~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
....+|.+|||+++.+++.+ +++.++|.|+|++|||+|||.++|||++|++++.|..+.. ..+|.++|||++|+|++
T Consensus 15 ~~~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-~~~p~v~G~E~~G~V~~ 93 (354)
T 2j8z_A 15 TENLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPP-PGASNILGLEASGHVAE 93 (354)
T ss_dssp ------CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-TTSCSSSCSEEEEEEEE
T ss_pred ccccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCC-CCCCcccceeeEEEEEE
Confidence 45568899999999999864 8999999999999999999999999999999999876543 25789999999999999
Q ss_pred eCCCC-CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEee
Q 016363 86 VGEYV-EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164 (390)
Q Consensus 86 vG~~v-~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~ 164 (390)
+|++| ++|++||+|++... .|+|+||++++
T Consensus 94 vG~~v~~~~~vGdrV~~~~~-------------------------------------------------~G~~aey~~v~ 124 (354)
T 2j8z_A 94 LGPGCQGHWKIGDTAMALLP-------------------------------------------------GGGQAQYVTVP 124 (354)
T ss_dssp ECSCC--CCCTTCEEEEECS-------------------------------------------------SCCSBSEEEEE
T ss_pred ECCCcCCCCCCCCEEEEecC-------------------------------------------------CCcceeEEEeC
Confidence 99999 99999999987521 15899999999
Q ss_pred CCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 165 ~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
++.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.+
T Consensus 125 ~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~ 203 (354)
T 2j8z_A 125 EGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMA 203 (354)
T ss_dssp GGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred HHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999878899999999999996 9999999999999999 999999999999999
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch-Hhh-
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEI- 320 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~- 320 (390)
+++|++.++++.+ .++.+.+.+.+++ ++|++|||+|+.. +..++++++++ |+++.+|..... ..+++. ..+
T Consensus 204 ~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~ 277 (354)
T 2j8z_A 204 EKLGAAAGFNYKK---EDFSEATLKFTKGAGVNLILDCIGGSY-WEKNVNCLALD-GRWVLYGLMGGG-DINGPLFSKLL 277 (354)
T ss_dssp HHHTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCGGG-HHHHHHHEEEE-EEEEECCCTTCS-CCCSCHHHHHH
T ss_pred HHcCCcEEEecCC---hHHHHHHHHHhcCCCceEEEECCCchH-HHHHHHhccCC-CEEEEEeccCCC-ccCCChhHHHH
Confidence 9999999998876 7888999988877 8999999999875 88999999999 999999965432 234554 444
Q ss_pred hcceeEEeeecCCCCch-------hhHHHHHHHHHcC-CCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 321 LKGRSVCGTYFGGLKPR-------SDIATLAQKYLDK-ELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 321 ~~~~~i~g~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
.+++++.|+........ +.++++++++++| ++++.++++++|+|+++++||+.+.++... |+++++++
T Consensus 278 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 354 (354)
T 2j8z_A 278 FKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ 354 (354)
T ss_dssp HTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred hCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 45899999876543311 1124578888899 445566788999999999999999887654 99998763
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-50 Score=383.90 Aligned_cols=312 Identities=21% Similarity=0.224 Sum_probs=270.5
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++++++++ +++++.|.|+|++|||+|||.+++||++|++++.|..+.. .+|.++|||++|+|+++|+++++|
T Consensus 2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~e~~G~V~~vG~~v~~~ 79 (325)
T 3jyn_A 2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAP--FLPSGLGAEGAGVVEAVGDEVTRF 79 (325)
T ss_dssp EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCS--SSSBCCCCCEEEEEEEECTTCCSC
T ss_pred cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCC--CCCCCCCceeEEEEEEECCCCCCC
Confidence 999999999876 9999999999999999999999999999999999987664 689999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|+.... ..|+|+||+++|++.++++|+
T Consensus 80 ~~GdrV~~~~~------------------------------------------------~~G~~aey~~v~~~~~~~~P~ 111 (325)
T 3jyn_A 80 KVGDRVAYGTG------------------------------------------------PLGAYSEVHVLPEANLVKLAD 111 (325)
T ss_dssp CTTCEEEESSS------------------------------------------------SSCCSBSEEEEEGGGEEECCT
T ss_pred CCCCEEEEecC------------------------------------------------CCccccceEEecHHHeEECCC
Confidence 99999986421 015899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++++|+++++..+|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|+++++
T Consensus 112 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~ 190 (325)
T 3jyn_A 112 SVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETI 190 (325)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEE
T ss_pred CCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999999988899999999999996 9999999999999999 999999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc--ceeEEee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GRSVCGT 329 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~i~g~ 329 (390)
++.+ .++.+.+.+++++ ++|++|||+|+.. +..++++++++ |+++.+|..... ...++...+.. .+.+.+.
T Consensus 191 ~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (325)
T 3jyn_A 191 DYSH---EDVAKRVLELTDGKKCPVVYDGVGQDT-WLTSLDSVAPR-GLVVSFGNASGP-VSGVNLGILAQKDSVYVTRP 264 (325)
T ss_dssp ETTT---SCHHHHHHHHTTTCCEEEEEESSCGGG-HHHHHTTEEEE-EEEEECCCTTCC-CCSCCTHHHHHTTSCEEECC
T ss_pred eCCC---ccHHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhcCC-CEEEEEecCCCC-CCCCCHHHHhhcCcEEEEee
Confidence 9877 7899999999988 9999999999865 89999999999 999999976533 22344433333 4555543
Q ss_pred ecCCCC-c----hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 330 YFGGLK-P----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 330 ~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.++.+. . .+.++++++++++|++++. ++++|+|+++++||+.+.+++.. |+|+.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p 325 (325)
T 3jyn_A 265 TLGSYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRTTGSTILIP 325 (325)
T ss_dssp CHHHHSCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred eeeeecCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 322111 1 2345689999999988876 67999999999999999998876 999874
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-50 Score=384.22 Aligned_cols=318 Identities=19% Similarity=0.223 Sum_probs=269.7
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
.|.+|||++++++++++++.++|.|+|++|||||||.+++||++|++++.|..+.....+|.++|||++|+|+++|++|+
T Consensus 4 ~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~ 83 (343)
T 3gaz_A 4 TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVD 83 (343)
T ss_dssp --CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCC
Confidence 46889999999999889999999999999999999999999999999998865332236899999999999999999999
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
+|++||+|++... |... ..|+|+||++++++.++++
T Consensus 84 ~~~vGdrV~~~~~--------------------------g~~~------------------~~G~~aey~~v~~~~~~~~ 119 (343)
T 3gaz_A 84 SFRVGDAVFGLTG--------------------------GVGG------------------LQGTHAQFAAVDARLLASK 119 (343)
T ss_dssp SCCTTCEEEEECC--------------------------SSTT------------------CCCSSBSEEEEEGGGEEEC
T ss_pred CCCCCCEEEEEeC--------------------------CCCC------------------CCcceeeEEEecHHHeeeC
Confidence 9999999987431 1110 1258999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
|+++++++||.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++ .+++++++++++|++.
T Consensus 120 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 120 PAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP 197 (343)
T ss_dssp CTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE
T ss_pred CCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE
Confidence 9999999999999999999999878899999999999996 9999999999999999 99999 8999999999999998
Q ss_pred EEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 329 (390)
++ .+ .++.+.+++.+++ ++|+||||+|+.. ++.++++++++ |+++.+|... ..+. ...+.+++++.|+
T Consensus 198 -i~-~~---~~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~---~~~~-~~~~~~~~~~~g~ 266 (343)
T 3gaz_A 198 -ID-AS---REPEDYAAEHTAGQGFDLVYDTLGGPV-LDASFSAVKRF-GHVVSCLGWG---THKL-APLSFKQATYSGV 266 (343)
T ss_dssp -EE-TT---SCHHHHHHHHHTTSCEEEEEESSCTHH-HHHHHHHEEEE-EEEEESCCCS---CCCC-HHHHHTTCEEEEC
T ss_pred -ec-cC---CCHHHHHHHHhcCCCceEEEECCCcHH-HHHHHHHHhcC-CeEEEEcccC---cccc-chhhhcCcEEEEE
Confidence 77 44 6889999999888 9999999999865 89999999999 9999998654 1222 1224458899887
Q ss_pred ecCCC-----C---chhhHHHHHHHHHcCCCCCcccee-eeeccccHHHHHHHHhcCCc-----eEEEEecCC
Q 016363 330 YFGGL-----K---PRSDIATLAQKYLDKELNLGEFIT-HEVSFHDINKAFDLLLEGKS-----LRCIIWMDK 388 (390)
Q Consensus 330 ~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~~~~A~~~~~~~~~-----~kvvl~~~~ 388 (390)
..... . ..++++++++++++|++++ .++ ++|+|+++++||+.+.+++. +|++++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~ 337 (343)
T 3gaz_A 267 FTLHTLLANEGLAHFGEMLREADALVQTGKLAP--RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEG 337 (343)
T ss_dssp CTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCC--CBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC-
T ss_pred EeccchhcccchHHHHHHHHHHHHHHHCCCccc--CccCcEecHHHHHHHHHHHHcCCCcccccceEEEEecc
Confidence 54321 0 1367899999999998764 577 79999999999999988754 399999864
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-50 Score=387.30 Aligned_cols=322 Identities=17% Similarity=0.167 Sum_probs=270.1
Q ss_pred CCCCCccceeeEEEeecC---CCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeE
Q 016363 7 SPKAGKVIRCKAAICRIP---GKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 81 (390)
Q Consensus 7 ~~~~~~~~t~~a~~~~~~---~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G 81 (390)
+.+....++|||++++++ +++ +++.++|.|+|++|||+|||.+++||++|++++.|..+.. .+|.++|||++|
T Consensus 14 ~~~~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G 91 (363)
T 4dvj_A 14 GTENLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDG--TDWKVIGYDAAG 91 (363)
T ss_dssp -----CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC----CCSBCCCCCEEE
T ss_pred cchhhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCC--CCCCcccceeEE
Confidence 345556789999999876 333 9999999999999999999999999999999999987655 789999999999
Q ss_pred EEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeE
Q 016363 82 VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161 (390)
Q Consensus 82 ~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~ 161 (390)
+|+++|++|++|++||||++... ... .|+|+||+
T Consensus 92 ~V~~vG~~v~~~~vGdrV~~~~~---------------------------~~~-------------------~G~~aey~ 125 (363)
T 4dvj_A 92 IVSAVGPDVTLFRPGDEVFYAGS---------------------------IIR-------------------PGTNAEFH 125 (363)
T ss_dssp EEEEECTTCCSCCTTCEEEECCC---------------------------TTS-------------------CCSCBSEE
T ss_pred EEEEeCCCCCCCCCCCEEEEccC---------------------------CCC-------------------CccceEEE
Confidence 99999999999999999986421 111 25899999
Q ss_pred EeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCC-----CCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEec
Q 016363 162 VVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE-----VGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVD 234 (390)
Q Consensus 162 ~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~-----~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~ 234 (390)
++|++.++++|+++++++||+++++++|||+++.+.++++ +|++|||+|+ |++|++++|+|+.+ |+ +|++++
T Consensus 126 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~ 204 (363)
T 4dvj_A 126 LVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATA 204 (363)
T ss_dssp EEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEEC
T ss_pred EeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEe
Confidence 9999999999999999999999999999999988888998 8999999995 99999999999985 77 999999
Q ss_pred CChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcc
Q 016363 235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 314 (390)
Q Consensus 235 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 314 (390)
++++|+++++++|+++++++.+ ++.+.++++.++++|+||||+|+...++.++++++++ |+++.+|... +
T Consensus 205 ~~~~~~~~~~~lGad~vi~~~~----~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~-----~ 274 (363)
T 4dvj_A 205 SRPETQEWVKSLGAHHVIDHSK----PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDPS-----A 274 (363)
T ss_dssp SSHHHHHHHHHTTCSEEECTTS----CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCCS-----S
T ss_pred CCHHHHHHHHHcCCCEEEeCCC----CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCCC-----c
Confidence 9999999999999999999865 6888998885459999999999887689999999999 9999996421 2
Q ss_pred cchHhhh-cceeEEeeecCCC-----Cc----hhhHHHHHHHHHcCCCCCccceeeee---ccccHHHHHHHHhcCCce-
Q 016363 315 LNSIEIL-KGRSVCGTYFGGL-----KP----RSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL- 380 (390)
Q Consensus 315 ~~~~~~~-~~~~i~g~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~~~~A~~~~~~~~~~- 380 (390)
++...+. +++++.++..... .. .+.++++++++++|++++. ++++| +++++++|++.+.+++..
T Consensus 275 ~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~~~~l~~~~~A~~~~~~~~~~G 352 (363)
T 4dvj_A 275 FDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTT--LTNRLSPINAANLKQAHALVESGTARG 352 (363)
T ss_dssp CCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCC--EEEEECSCSHHHHHHHHHHHHHTCCCS
T ss_pred cchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeecc--ccceecCCCHHHHHHHHHHHHhCCCce
Confidence 3333344 4788888654321 11 3568899999999987754 65655 999999999999988876
Q ss_pred EEEEecCCC
Q 016363 381 RCIIWMDKL 389 (390)
Q Consensus 381 kvvl~~~~~ 389 (390)
|+|++++.+
T Consensus 353 KvVl~~~~~ 361 (363)
T 4dvj_A 353 KVVIEGFGL 361 (363)
T ss_dssp EEEEECSCC
T ss_pred EEEEeCccc
Confidence 999999865
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-50 Score=383.83 Aligned_cols=313 Identities=20% Similarity=0.214 Sum_probs=266.8
Q ss_pred ceeeEEEeecCC-----CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 14 IRCKAAICRIPG-----KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 14 ~t~~a~~~~~~~-----~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
|||||++++++| +.+++.++|.|+|++|||+|||.+++||++|++.+.|. .. .+|.++|||++|+|+++|+
T Consensus 1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~--~~p~i~G~e~~G~V~~vG~ 76 (346)
T 3fbg_A 1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VS--KAPRVLGFDAIGVVESVGN 76 (346)
T ss_dssp -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CS--SSCBCCCCCEEEEEEEECT
T ss_pred CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CC--CCCcCcCCccEEEEEEeCC
Confidence 689999999886 34999999999999999999999999999999999887 22 6899999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
+|++|++||+|++... ... .|+|+||+++|++.+
T Consensus 77 ~v~~~~~GdrV~~~~~---------------------------~~~-------------------~G~~aey~~v~~~~~ 110 (346)
T 3fbg_A 77 EVTMFNQGDIVYYSGS---------------------------PDQ-------------------NGSNAEYQLINERLV 110 (346)
T ss_dssp TCCSCCTTCEEEECCC---------------------------TTS-------------------CCSSBSEEEEEGGGE
T ss_pred CCCcCCCCCEEEEcCC---------------------------CCC-------------------CcceeEEEEEChHHe
Confidence 9999999999986421 111 258999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCC------CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE------VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE 241 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~------~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~ 241 (390)
+++|+++++++||++++++.|||+++.+.++++ +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++
T Consensus 111 ~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~ 189 (346)
T 3fbg_A 111 AKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIE 189 (346)
T ss_dssp EECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHH
T ss_pred EECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 999999999999999999999999998889998 9999999965 9999999999999999 9999999999999
Q ss_pred HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh
Q 016363 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL 321 (390)
Q Consensus 242 ~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 321 (390)
+++++|+++++++++ ++.+.++++.++++|+||||+|+...++.++++++++ |+++.+|... . +++...+.
T Consensus 190 ~~~~lGa~~vi~~~~----~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~~--~--~~~~~~~~ 260 (346)
T 3fbg_A 190 WTKKMGADIVLNHKE----SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAFE--N--DQDLNALK 260 (346)
T ss_dssp HHHHHTCSEEECTTS----CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCCS--S--CBCGGGGT
T ss_pred HHHhcCCcEEEECCc----cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--C--CCcccccc
Confidence 999999999998865 6888898884449999999999888789999999999 9999887432 2 23333344
Q ss_pred -cceeEEeeecCCCC---------chhhHHHHHHHHHcCCCCCccceeeee---ccccHHHHHHHHhcCCce-EEEEecC
Q 016363 322 -KGRSVCGTYFGGLK---------PRSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 322 -~~~~i~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
+++++.++...... ..+.++++++++++|++++ .++++| +++++++||+.+.+++.. |+|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~ 338 (346)
T 3fbg_A 261 PKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQP--TTTKVIEGLTTENIYQAHQILESNTMIGKLVINLN 338 (346)
T ss_dssp TTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCC--CEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC-
T ss_pred ccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEEC--CccceecCCCHHHHHHHHHHHhcCCcceEEEEecC
Confidence 47888886543210 1356889999999998764 477777 999999999999998876 9999987
Q ss_pred C
Q 016363 388 K 388 (390)
Q Consensus 388 ~ 388 (390)
+
T Consensus 339 ~ 339 (346)
T 3fbg_A 339 E 339 (346)
T ss_dssp -
T ss_pred C
Confidence 5
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-50 Score=378.91 Aligned_cols=308 Identities=19% Similarity=0.176 Sum_probs=261.3
Q ss_pred cceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-----CCCCCCCCcccccceeEEEEE
Q 016363 13 VIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-----DLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 13 ~~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~~~~~~p~~~G~e~~G~V~~ 85 (390)
.++|||+++.+++++ +++.++|.|+|++|||+|||++++||++|+++++|.. ... .+|.++|||++|+|++
T Consensus 4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~--~~p~v~G~E~~G~V~~ 81 (321)
T 3tqh_A 4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKN--NLPSGLGYDFSGEVIE 81 (321)
T ss_dssp -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTT--SCSBCCCCEEEEEEEE
T ss_pred cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccC--CCCCcccceeEEEEEE
Confidence 368999999999876 8999999999999999999999999999999998832 122 6899999999999999
Q ss_pred eCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
+|++|++|++||||++.+..+ .. .|+|+||+++++
T Consensus 82 vG~~v~~~~~GdrV~~~~~~~--------------------------~~-------------------~G~~aey~~v~~ 116 (321)
T 3tqh_A 82 LGSDVNNVNIGDKVMGIAGFP--------------------------DH-------------------PCCYAEYVCASP 116 (321)
T ss_dssp ECTTCCSCCTTCEEEEECSTT--------------------------TC-------------------CCCSBSEEEECG
T ss_pred eCCCCCCCCCCCEEEEccCCC--------------------------CC-------------------CCcceEEEEecH
Confidence 999999999999999764210 01 158999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
+.++++|+++++++||+++++++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++ +++++++++
T Consensus 117 ~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~ 193 (321)
T 3tqh_A 117 DTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLK 193 (321)
T ss_dssp GGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHH
T ss_pred HHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHH
Confidence 99999999999999999999999999998 8899999999999985 9999999999999999 999998 566789999
Q ss_pred hcCCcEEEcCCCCCCcC-HHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcc
Q 016363 245 KFGITDFINPATCGDKT-VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 323 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~-~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 323 (390)
++|+++++++.+ .+ +.+.+ +++|+||||+|++. ...++++++++ |+++.+|..... . .......++
T Consensus 194 ~lGa~~~i~~~~---~~~~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~--~-~~~~~~~~~ 260 (321)
T 3tqh_A 194 ALGAEQCINYHE---EDFLLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTITAG--R-VIEVAKQKH 260 (321)
T ss_dssp HHTCSEEEETTT---SCHHHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCSTTHH--H-HHHHHHHTT
T ss_pred HcCCCEEEeCCC---cchhhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCCCch--h-hhhhhhhcc
Confidence 999999999877 55 54433 48999999999988 59999999999 999999854321 1 111223447
Q ss_pred eeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 324 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 324 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
+++.++.. ....++++++++++++|++++ .++++|+|+++++||+.+.+++.. |+|++++
T Consensus 261 ~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 321 (321)
T 3tqh_A 261 RRAFGLLK--QFNIEELHYLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHVRGKLVFKVR 321 (321)
T ss_dssp CEEECCCC--CCCHHHHHHHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred eEEEEEec--CCCHHHHHHHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 88887532 223678999999999998776 488999999999999999988876 9999874
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-49 Score=376.66 Aligned_cols=314 Identities=21% Similarity=0.261 Sum_probs=265.6
Q ss_pred ccceeeEEEeecCCCC--cEE-EEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 12 KVIRCKAAICRIPGKP--LVI-EEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~--~~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
.|.+|||+++.+++.+ +++ +++|.|+|++|||+|||.++|||++|++++.|..+.. ..+|.++|||++|+|+++|+
T Consensus 26 ~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-~~~P~v~G~E~~G~V~~vG~ 104 (351)
T 1yb5_A 26 GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRK-PLLPYTPGSDVAGVIEAVGD 104 (351)
T ss_dssp --CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCC-CCSSBCCCSCEEEEEEEECT
T ss_pred CcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC-CCCCCcCCceeEEEEEEECC
Confidence 4678999999988764 888 7999999999999999999999999999998865432 26899999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
+|++|++||||++... . .|+|+||+++|++.+
T Consensus 105 ~v~~~~vGdrV~~~~~-----------------------------~-------------------~G~~aey~~v~~~~~ 136 (351)
T 1yb5_A 105 NASAFKKGDRVFTSST-----------------------------I-------------------SGGYAEYALAADHTV 136 (351)
T ss_dssp TCTTCCTTCEEEESCC-----------------------------S-------------------SCSSBSEEEEEGGGE
T ss_pred CCCCCCCCCEEEEeCC-----------------------------C-------------------CCcceeEEEECHHHe
Confidence 9999999999986421 0 158999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
+++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|
T Consensus 137 ~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g 215 (351)
T 1yb5_A 137 YKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNG 215 (351)
T ss_dssp EECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT
T ss_pred EECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcC
Confidence 9999999999999999999999999977899999999999998 9999999999999999 9999999999999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hccee
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRS 325 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~ 325 (390)
++.++++.+ .++.+.+.+.+++ ++|++|||+|+.. +..++++++++ |+++.+|... ..+++...+ .++++
T Consensus 216 a~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~G~~~-~~~~~~~l~~~-G~iv~~g~~~---~~~~~~~~~~~~~~~ 287 (351)
T 1yb5_A 216 AHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHG-GRVIVVGSRG---TIEINPRDTMAKESS 287 (351)
T ss_dssp CSEEEETTS---TTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEE-EEEEECCCCS---CEEECTHHHHTTTCE
T ss_pred CCEEEeCCC---chHHHHHHHHcCCCCcEEEEECCChHH-HHHHHHhccCC-CEEEEEecCC---CCccCHHHHHhCCcE
Confidence 999998876 6888889888877 8999999999875 88999999999 9999999532 234444444 44889
Q ss_pred EEeeecCCCCchhh----HHHHHHHHHcCCCCCccceeeeeccccHHHHHHH-HhcCCc-eEEEEec
Q 016363 326 VCGTYFGGLKPRSD----IATLAQKYLDKELNLGEFITHEVSFHDINKAFDL-LLEGKS-LRCIIWM 386 (390)
Q Consensus 326 i~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~-~~~~~~-~kvvl~~ 386 (390)
+.|+.+.... .++ ++.+.++++++++. ++++++|+|+++++|++. +.++.. +|+|+++
T Consensus 288 i~g~~~~~~~-~~~~~~~~~~l~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~ 351 (351)
T 1yb5_A 288 IIGVTLFSST-KEEFQQYAAALQAGMEIGWLK--PVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 351 (351)
T ss_dssp EEECCGGGCC-HHHHHHHHHHHHHHHHHTCCC--CCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred EEEEEeecCC-HHHHHHHHHHHHHHHHCCCcc--CccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 9998654322 233 34566677888654 458899999999999998 555544 4999874
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=388.31 Aligned_cols=318 Identities=14% Similarity=0.131 Sum_probs=264.4
Q ss_pred CccceeeEEEee--cC---CCCcEEEEe---------ecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccc
Q 016363 11 GKVIRCKAAICR--IP---GKPLVIEEI---------EVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76 (390)
Q Consensus 11 ~~~~t~~a~~~~--~~---~~~~~~~~~---------~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G 76 (390)
.+|.+|||++++ ++ .+.++++++ |.|+|++|||+|||++++||++|+++++|..+.. ..+|.++|
T Consensus 6 ~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-~~~p~v~G 84 (349)
T 3pi7_A 6 TIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQP-RVKGRPAG 84 (349)
T ss_dssp CCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSC-BCTTSBCC
T ss_pred CCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCC-CCCCCCcc
Confidence 478999999999 33 223777777 9999999999999999999999999999876543 26899999
Q ss_pred cceeEEEEEeCCCC-CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccccc
Q 016363 77 HEAVGVVESVGEYV-EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNIS 155 (390)
Q Consensus 77 ~e~~G~V~~vG~~v-~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g 155 (390)
||++|+|+++|++| ++|++||+|++.. |...+ |
T Consensus 85 ~E~~G~V~~vG~~v~~~~~vGdrV~~~~---------------------------g~~~~-------------------G 118 (349)
T 3pi7_A 85 FEGVGTIVAGGDEPYAKSLVGKRVAFAT---------------------------GLSNW-------------------G 118 (349)
T ss_dssp SEEEEEEEEECSSHHHHHHTTCEEEEEC---------------------------TTSSC-------------------C
T ss_pred ceEEEEEEEECCCccCCCCCCCEEEEec---------------------------cCCCC-------------------c
Confidence 99999999999999 9999999998753 12222 5
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCC-CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG-STVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g-~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 233 (390)
+|+||+++|++.++++|+++++++||++++..+|||++ .+.++ ++| ++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus 119 ~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~-~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~ 195 (349)
T 3pi7_A 119 SWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM-FDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVT 195 (349)
T ss_dssp SSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHH-HHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEE
T ss_pred cceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHH-HHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEE
Confidence 89999999999999999999999999999999999965 46666 777 68888865 9999999999999999 99999
Q ss_pred cCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC
Q 016363 234 DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312 (390)
Q Consensus 234 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 312 (390)
+++++++++++++|+++++++++ .++.+.+++++++ ++|+||||+|+.. ...++++++++ |+++.+|..... .
T Consensus 196 ~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~-~ 269 (349)
T 3pi7_A 196 VRRDEQIALLKDIGAAHVLNEKA---PDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKR-ARWIIYGRLDPD-A 269 (349)
T ss_dssp ESCGGGHHHHHHHTCSEEEETTS---TTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTT-CEEEECCCSCCS-C
T ss_pred eCCHHHHHHHHHcCCCEEEECCc---HHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCC-CEEEEEeccCCC-C
Confidence 99999999999999999999877 7899999999987 9999999999887 78899999999 999999965432 2
Q ss_pred cccch-Hh-hhcceeEEeeecCCCC------chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEE
Q 016363 313 ISLNS-IE-ILKGRSVCGTYFGGLK------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384 (390)
Q Consensus 313 ~~~~~-~~-~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 384 (390)
..++. .. +.+++++.|+..+.+. ..++++++++++++|+++ +.++++|+|+++++||+.+.++..+|+|+
T Consensus 270 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~gKvvl 347 (349)
T 3pi7_A 270 TVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWS--TDVTAVVPLAEAIAWVPAELTKPNGKVFI 347 (349)
T ss_dssp CCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCC--C-CCEEEEHHHHHHHHHHHHTSSSSCEEE
T ss_pred CCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcc--cccceEEcHHHHHHHHHHHhCCCCceEEE
Confidence 33444 33 4459999998654321 135678888999999875 45889999999999999666655569999
Q ss_pred ec
Q 016363 385 WM 386 (390)
Q Consensus 385 ~~ 386 (390)
++
T Consensus 348 ~p 349 (349)
T 3pi7_A 348 RP 349 (349)
T ss_dssp EC
T ss_pred eC
Confidence 75
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-50 Score=382.19 Aligned_cols=302 Identities=14% Similarity=0.144 Sum_probs=243.9
Q ss_pred ceeeEEEeec-CCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 14 IRCKAAICRI-PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 14 ~t~~a~~~~~-~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
.||||+++++ ++. +++.++|.|+|++|||+|||.+++||++|+++++|..+.. .+|.++|||++|+|+++|++|++
T Consensus 3 ~tMka~~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~ 79 (315)
T 3goh_A 3 EQHQVWAYQTKTHS-VTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINW--SNGHVPGVDGAGVIVKVGAKVDS 79 (315)
T ss_dssp CEEEEEEEETTTTE-EEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCC--CTTCCCCSEEEEEEEEECTTSCG
T ss_pred cceEEEEEeCCCCe-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcC--CCCCEeeeeeEEEEEEeCCCCCC
Confidence 4799999995 444 9999999999999999999999999999999999987655 78999999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||||++.+. ...+ |+|+||+++|++.++++|
T Consensus 80 ~~vGdrV~~~~~---------------------------~~~~-------------------G~~aey~~v~~~~~~~iP 113 (315)
T 3goh_A 80 KMLGRRVAYHTS---------------------------LKRH-------------------GSFAEFTVLNTDRVMTLP 113 (315)
T ss_dssp GGTTCEEEEECC---------------------------TTSC-------------------CSSBSEEEEETTSEEECC
T ss_pred CCCCCEEEEeCC---------------------------CCCC-------------------cccccEEEEcHHHhccCc
Confidence 999999997632 1112 589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++||+++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++ +++|+++++++|+++++
T Consensus 114 ~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 114 DNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLY 190 (315)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEE
T ss_pred CCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEE
Confidence 9999999999999999999999 89999999999999999999999999999999 999999 99999999999999988
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecC
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 332 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (390)
+ + .+.+ ++++|+||||+|+.. ...++++++++ |+++.+|........+ .+.+++.+....+.
T Consensus 191 ~--d------~~~v----~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~----~~~~~~~~~~~~~~ 252 (315)
T 3goh_A 191 R--E------PSQV----TQKYFAIFDAVNSQN-AAALVPSLKAN-GHIICIQDRIPAPIDP----AFTRTISYHEIALG 252 (315)
T ss_dssp S--S------GGGC----CSCEEEEECC--------TTGGGEEEE-EEEEEECCC--------------CCSEEEEECGG
T ss_pred c--C------HHHh----CCCccEEEECCCchh-HHHHHHHhcCC-CEEEEEeCCCCccccc----hhhhcceeeEEEee
Confidence 4 1 1222 449999999999987 68899999999 9999997543221111 11223333333221
Q ss_pred -----CCC-----chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecCC
Q 016363 333 -----GLK-----PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK 388 (390)
Q Consensus 333 -----~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~~ 388 (390)
... ..+.++++++++++|+++ ++++++|+|+++++||+.+. ...+|+++++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~-~~~gKvvi~~~~ 315 (315)
T 3goh_A 253 ALHDFGDRQDWQILMQQGEALLTLIAQGKME--IAAPDIFRFEQMIEALDHSE-QTKLKTVLTLNE 315 (315)
T ss_dssp GHHHHCCHHHHHHHHHHHHHHHHHHHTTSSC--CCCCEEEEGGGHHHHHHHHH-HHCCCEEEESCC
T ss_pred cccccCChhHHHHHHHHHHHHHHHHHCCCcc--cccceEecHHHHHHHHHHHH-hcCCcEEEEecC
Confidence 111 123578899999999875 45889999999999999998 444599999875
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-49 Score=381.95 Aligned_cols=319 Identities=20% Similarity=0.269 Sum_probs=263.7
Q ss_pred CCCccceeeEEEeecCCCC---cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 9 KAGKVIRCKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 9 ~~~~~~t~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
...||.+|||+++.+++.+ ++++++|.|+|++|||+|||.++|||++|++.+.|..+.. ..+|.++|||++|+|++
T Consensus 20 ~~~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-~~~P~v~G~E~~G~V~~ 98 (357)
T 1zsy_A 20 FQSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLL-PELPAVGGNEGVAQVVA 98 (357)
T ss_dssp CCCCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCC-CCSSEECCSCCEEEEEE
T ss_pred hhhCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCC-CCCCccccceEEEEEEE
Confidence 3468889999999999875 8899999999999999999999999999999999876543 15799999999999999
Q ss_pred eCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
+|++|++|++||||++.+. ..|+|+||+++++
T Consensus 99 vG~~v~~~~vGdrV~~~~~------------------------------------------------~~G~~aey~~v~~ 130 (357)
T 1zsy_A 99 VGSNVTGLKPGDWVIPANA------------------------------------------------GLGTWRTEAVFSE 130 (357)
T ss_dssp ECTTCCSCCTTCEEEESSS------------------------------------------------CSCCSBSEEEEEG
T ss_pred eCCCCCCCCCCCEEEEcCC------------------------------------------------CCccceeEEecCH
Confidence 9999999999999987431 0158999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh----hhH
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKF 240 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~----~~~ 240 (390)
+.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ ++|+++++. ++.
T Consensus 131 ~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~ 209 (357)
T 1zsy_A 131 EALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLS 209 (357)
T ss_dssp GGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHH
T ss_pred HHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHH
Confidence 9999999999999999999999999999877789999999999998 9999999999999999 777776543 256
Q ss_pred HHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC--CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH
Q 016363 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDG--GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 318 (390)
Q Consensus 241 ~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 318 (390)
++++++|+++++++.+ ...+.+.+++.+ ++|+||||+|+.. ...++++++++ |+++.+|.... ....++..
T Consensus 210 ~~~~~lGa~~vi~~~~----~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~ 282 (357)
T 1zsy_A 210 DRLKSLGAEHVITEEE----LRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMAK-QPVVASVS 282 (357)
T ss_dssp HHHHHTTCSEEEEHHH----HHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEEEECCCCTT-CCBCCCHH
T ss_pred HHHHhcCCcEEEecCc----chHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEEEEEecCCC-CCCCCCHH
Confidence 7889999999998643 112344555554 5999999999877 56789999999 99999985432 23445544
Q ss_pred hhh-cceeEEeeecCCC----C---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 319 EIL-KGRSVCGTYFGGL----K---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 319 ~~~-~~~~i~g~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+. +++++.|+..+.+ . ..+.++++++++++|++++. +.++|+|+++++|++.+.++... |+|+++
T Consensus 283 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 357 (357)
T 1zsy_A 283 LLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEASMKPFISSKQILTM 357 (357)
T ss_dssp HHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred HHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCc--cceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence 444 5899999865421 0 12457889999999988765 55899999999999999887754 999874
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=376.23 Aligned_cols=319 Identities=17% Similarity=0.196 Sum_probs=270.4
Q ss_pred CccceeeEEEeecCCC----CcEE-EEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 11 GKVIRCKAAICRIPGK----PLVI-EEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 11 ~~~~t~~a~~~~~~~~----~~~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
.+|.+|||+++++++. .+++ +++|.|+|++|||+|||.++|||++|++++.|..+.. ..+|.++|||++|+|++
T Consensus 19 ~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-~~~P~i~G~E~~G~V~~ 97 (362)
T 2c0c_A 19 YFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPS-VKPPFDIGFEGIGEVVA 97 (362)
T ss_dssp HHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTT-CCSCEECCSEEEEEEEE
T ss_pred cchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCC-CCCCCCCCceeEEEEEE
Confidence 3678899999999875 3788 9999999999999999999999999999999876432 26899999999999999
Q ss_pred eCCCCC-cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEee
Q 016363 86 VGEYVE-EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164 (390)
Q Consensus 86 vG~~v~-~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~ 164 (390)
+|++|+ +|++||||++... |+|+||+++|
T Consensus 98 vG~~V~~~~~vGdrV~~~~~--------------------------------------------------G~~aey~~v~ 127 (362)
T 2c0c_A 98 LGLSASARYTVGQAVAYMAP--------------------------------------------------GSFAEYTVVP 127 (362)
T ss_dssp ECTTGGGTCCTTCEEEEECS--------------------------------------------------CCSBSEEEEE
T ss_pred ECCCccCCCCCCCEEEEccC--------------------------------------------------CcceeEEEEc
Confidence 999999 9999999986421 5899999999
Q ss_pred CCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 165 ~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
++.++++|++ + .++++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.+
T Consensus 128 ~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~ 204 (362)
T 2c0c_A 128 ASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFL 204 (362)
T ss_dssp GGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred HHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHH
Confidence 9999999986 3 4677888899999999988889999999999996 9999999999999999 999999999999999
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC---------cc
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP---------IS 314 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~---------~~ 314 (390)
+++|++.++++.+ .++.+.+++.+++++|+||||+|+.. ++.++++++++ |+++.+|....... ..
T Consensus 205 ~~~Ga~~~~~~~~---~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~ 279 (362)
T 2c0c_A 205 KSLGCDRPINYKT---EPVGTVLKQEYPEGVDVVYESVGGAM-FDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGT 279 (362)
T ss_dssp HHTTCSEEEETTT---SCHHHHHHHHCTTCEEEEEECSCTHH-HHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTT
T ss_pred HHcCCcEEEecCC---hhHHHHHHHhcCCCCCEEEECCCHHH-HHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccc
Confidence 9999999998876 67888888877559999999999855 89999999999 99999996542210 02
Q ss_pred cchHhhhcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccc------eeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 315 LNSIEILKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEF------ITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 315 ~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+....+.+++++.|+....+. ..++++++++++++|++++... +++.|+|+++++|++.+.++... |++++
T Consensus 280 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~ 359 (362)
T 2c0c_A 280 LPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVE 359 (362)
T ss_dssp HHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEE
T ss_pred cHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEE
Confidence 222334458999998654432 2467899999999998887643 34678999999999999887654 99998
Q ss_pred cCC
Q 016363 386 MDK 388 (390)
Q Consensus 386 ~~~ 388 (390)
+++
T Consensus 360 ~~~ 362 (362)
T 2c0c_A 360 LPH 362 (362)
T ss_dssp CCC
T ss_pred cCC
Confidence 864
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-49 Score=374.34 Aligned_cols=316 Identities=19% Similarity=0.262 Sum_probs=266.3
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|||+++++++.+ +++.++|.|+|++|||+|||.+++||++|++++.|.. +.....+|.++|||++|+|+++|++|++
T Consensus 2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 81 (333)
T 1wly_A 2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD 81 (333)
T ss_dssp CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence 899999998754 8899999999999999999999999999999998865 1100158999999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||||+..+. . .|+|+||+++|++.++++|
T Consensus 82 ~~~GdrV~~~~~-----------------------------~-------------------~G~~aey~~v~~~~~~~iP 113 (333)
T 1wly_A 82 FTVGERVCTCLP-----------------------------P-------------------LGAYSQERLYPAEKLIKVP 113 (333)
T ss_dssp CCTTCEEEECSS-----------------------------S-------------------CCCSBSEEEEEGGGCEECC
T ss_pred CCCCCEEEEecC-----------------------------C-------------------CCcceeEEEecHHHcEeCC
Confidence 999999975321 0 1589999999999999999
Q ss_pred CCCCcch--hhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 173 PHIPLGI--ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 173 ~~~~~~~--aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
+++++++ ||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++
T Consensus 114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~ 192 (333)
T 1wly_A 114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCH 192 (333)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS
T ss_pred CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC
Confidence 9999999 99999999999999877889999999999997 9999999999999999 999999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH-hh-hcc--e
Q 016363 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EI-LKG--R 324 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~-~~~--~ 324 (390)
.++++.+ .++.+.+.+.+.+ ++|++|||+|+.. ++.++++++++ |+++.+|..... ..+++.. .+ .++ +
T Consensus 193 ~~~d~~~---~~~~~~i~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~ 266 (333)
T 1wly_A 193 HTINYST---QDFAEVVREITGGKGVDVVYDSIGKDT-LQKSLDCLRPR-GMCAAYGHASGV-ADPIRVVEDLGVRGSLF 266 (333)
T ss_dssp EEEETTT---SCHHHHHHHHHTTCCEEEEEECSCTTT-HHHHHHTEEEE-EEEEECCCTTCC-CCCCCHHHHTTTTTSCE
T ss_pred EEEECCC---HHHHHHHHHHhCCCCCeEEEECCcHHH-HHHHHHhhccC-CEEEEEecCCCC-cCCCChhHhhhhcCCcE
Confidence 9998876 7888889888876 8999999999954 89999999999 999999965422 2334443 33 447 8
Q ss_pred eEEeeecCCCCc----hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 325 SVCGTYFGGLKP----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 325 ~i~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
++.|+....... .++++++++++++|++++ .++++|+|+++++|++.+.++... |+++++++
T Consensus 267 ~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 333 (333)
T 1wly_A 267 ITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHS--SVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA 333 (333)
T ss_dssp EECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCC--CEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred EEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCC--CcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 888875421111 246889999999998764 588999999999999999887654 99999864
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-49 Score=379.24 Aligned_cols=321 Identities=17% Similarity=0.200 Sum_probs=265.3
Q ss_pred cceeeEEEeecCCCC---cEEEEeecCCCC--CCeEEEEEeeeecccccccccccCCCCCCCCCC---------cccccc
Q 016363 13 VIRCKAAICRIPGKP---LVIEEIEVEPPK--AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLP---------VIFGHE 78 (390)
Q Consensus 13 ~~t~~a~~~~~~~~~---~~~~~~~~p~~~--~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p---------~~~G~e 78 (390)
+++|||+++++++.+ ++++++|.|+|+ +|||+|||.++|||++|+++++|..+.. ..+| .++|||
T Consensus 1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~P~~~~~~~p~~i~G~E 79 (364)
T 1gu7_A 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK-PAKTTGFGTTEPAAPCGNE 79 (364)
T ss_dssp CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCC-CCCBSTTCCSSCBEECCSC
T ss_pred CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCC-CCCCccccccCcccccCce
Confidence 578999999999875 899999999887 9999999999999999999999876532 1466 899999
Q ss_pred eeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccc
Q 016363 79 AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT 158 (390)
Q Consensus 79 ~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a 158 (390)
++|+|+++|++|++|++||+|++.+. ..|+|+
T Consensus 80 ~~G~V~~vG~~v~~~~vGdrV~~~~~------------------------------------------------~~G~~a 111 (364)
T 1gu7_A 80 GLFEVIKVGSNVSSLEAGDWVIPSHV------------------------------------------------NFGTWR 111 (364)
T ss_dssp CEEEEEEECTTCCSCCTTCEEEESSS------------------------------------------------CCCCSB
T ss_pred eEEEEEEeCCCCCcCCCCCEEEecCC------------------------------------------------CCCcch
Confidence 99999999999999999999986421 015899
Q ss_pred eeEEeeCCceEEcCC-----------CCCcchhhccccchhhHHHHHHHHhCCCCC-CEEEEEcC-ChHHHHHHHHHHHc
Q 016363 159 EYSVVDITHVVKITP-----------HIPLGIACLLSCGVSTGVGAAWKVAGVEVG-STVAIFGL-GAVGLAVAEGARLN 225 (390)
Q Consensus 159 ~~~~v~~~~v~~~p~-----------~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g-~~VlI~Ga-g~vG~~ai~la~~~ 225 (390)
||++++++.++++|+ ++++++||+++++++|||+++.+.+++++| ++|||+|+ |++|++++|+|+.+
T Consensus 112 ey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~ 191 (364)
T 1gu7_A 112 THALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191 (364)
T ss_dssp SEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHH
T ss_pred heEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHC
Confidence 999999999999998 899999999999999999998666799999 99999998 99999999999999
Q ss_pred CCCeEEEecCChhh----HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhc--CC-CccEEEEcccChHHHHHHHHHhccCC
Q 016363 226 RASKIIGVDINPEK----FEIGKKFGITDFINPATCGDKTVSQVIKEMT--DG-GADYCFECIGLTSVMNDAFNSSREGW 298 (390)
Q Consensus 226 g~~~Vi~~~~~~~~----~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~--~~-g~D~vid~~g~~~~~~~~~~~l~~~~ 298 (390)
|+ +||++++++++ .++++++|+++++++++....++.+.+++++ ++ ++|+||||+|+.. ...++++++++
T Consensus 192 Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~~l~~~- 268 (364)
T 1gu7_A 192 NF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN- 268 (364)
T ss_dssp TC-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT-
T ss_pred CC-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHHHhccC-
Confidence 99 89988876655 6778899999999865200136888898887 55 9999999999887 45889999999
Q ss_pred ceEEEEcccCCCCCcccchHhhh-cceeEEeeecCCCC------chhhHHHHHHHHHcCCCCCccceeeee-ccccHHHH
Q 016363 299 GKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK------PRSDIATLAQKYLDKELNLGEFITHEV-SFHDINKA 370 (390)
Q Consensus 299 G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~-~l~~~~~A 370 (390)
|+++.+|.... ...+++...+. +++++.|+....+. ..++++++++++++|++++....+..+ +++++.+|
T Consensus 269 G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A 347 (364)
T 1gu7_A 269 GLMLTYGGMSF-QPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHEL 347 (364)
T ss_dssp CEEEECCCCSS-CCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHH
T ss_pred CEEEEecCCCC-CCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHH
Confidence 99999996542 23445554444 58999987543210 135689999999999998875544444 45699999
Q ss_pred HHHHhcCCce-EEEEec
Q 016363 371 FDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 371 ~~~~~~~~~~-kvvl~~ 386 (390)
|+.+.++... |+|+++
T Consensus 348 ~~~~~~~~~~gKvvv~~ 364 (364)
T 1gu7_A 348 YQDGVANSKDGKQLITY 364 (364)
T ss_dssp HHHHHHTGGGSCEEEEC
T ss_pred HHHHHhCCCCceEEEeC
Confidence 9999877654 999875
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-49 Score=375.29 Aligned_cols=313 Identities=14% Similarity=0.115 Sum_probs=263.0
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++++++++ ++++++|.|+|++|||+|||++++||++|++.+.|..+.. ..+|.++|||++|+|+++| +++|
T Consensus 1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~G~E~~G~V~~~G--v~~~ 77 (324)
T 3nx4_A 1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKII-RHFPMIPGIDFAGTVHASE--DPRF 77 (324)
T ss_dssp CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCC-CSSSBCCCSEEEEEEEEES--STTC
T ss_pred CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCC-CCCCccccceeEEEEEEeC--CCCC
Confidence 899999999976 8899999999999999999999999999999999976543 2789999999999999999 5789
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||||++.+. ..|...+ |+|+||+++|++.++++|+
T Consensus 78 ~vGdrV~~~~~------------------------~~g~~~~-------------------G~~aey~~v~~~~~~~iP~ 114 (324)
T 3nx4_A 78 HAGQEVLLTGW------------------------GVGENHW-------------------GGLAERARVKGDWLVALPA 114 (324)
T ss_dssp CTTCEEEEECT------------------------TBTTTBC-------------------CSSBSEEEECGGGCEECCT
T ss_pred CCCCEEEEccc------------------------ccCCCCC-------------------CceeeEEecCHHHcEECCC
Confidence 99999997531 0122222 5899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHH--HHhCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAW--KVAGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~--~~~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
++++++||++++.+.|||+++. ...++++++ +|||+|+ |++|++++|+|+.+|+ +|++++++++|.++++++|++
T Consensus 115 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~ 193 (324)
T 3nx4_A 115 GLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGAN 193 (324)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCS
T ss_pred CCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCC
Confidence 9999999999999999999875 446677743 4999998 9999999999999999 999999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEe
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 328 (390)
+++++++ .+. +++++++++|++|||+|++. ++.++++++++ |+++.+|.... ...+++...+ .+++++.|
T Consensus 194 ~vi~~~~---~~~---~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~g 264 (324)
T 3nx4_A 194 RILSRDE---FAE---SRPLEKQLWAGAIDTVGDKV-LAKVLAQMNYG-GCVAACGLAGG-FALPTTVMPFILRNVRLQG 264 (324)
T ss_dssp EEEEGGG---SSC---CCSSCCCCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTC-SEEEEESHHHHHHCCEEEE
T ss_pred EEEecCC---HHH---HHhhcCCCccEEEECCCcHH-HHHHHHHHhcC-CEEEEEecCCC-CCCCCCHHHHhhcCeEEEE
Confidence 9998866 332 44555569999999999874 99999999999 99999996643 2334444444 45999999
Q ss_pred eecCCCCc---hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 329 TYFGGLKP---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 329 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
+....... .+.++++++++++|++++ . +++|+|+++++||+.+.+++.. |+|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~ 324 (324)
T 3nx4_A 265 VDSVMTPPARRAEAWARLVKDLPESFYAQ--A-ATEITLADAPKFADAIINNQVQGRTLVKIK 324 (324)
T ss_dssp CCSTTCCHHHHHHHHHHHHHHSCHHHHHH--H-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred EeccccChHHHHHHHHHHHHHHHcCCCCC--C-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence 86554332 256788899999997654 3 7999999999999999988875 9999875
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=367.76 Aligned_cols=313 Identities=18% Similarity=0.179 Sum_probs=264.1
Q ss_pred eeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 15 RCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 15 t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
+|||+++++++.+ +++.++|.|+|++|||+|||.+++||++|++.+.|..+.. .+|.++|||++|+|+++|++|++
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~ 78 (327)
T 1qor_A 1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPP--SLPSGLGTEAAGIVSKVGSGVKH 78 (327)
T ss_dssp -CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCS--SSSBCCCSCEEEEEEEECTTCCS
T ss_pred CcEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC--CCCCCCCceeEEEEEEECCCCCC
Confidence 3899999998754 8899999999999999999999999999999999876433 68999999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++|||| +.. | .. .|+|+||+++|++.++++|
T Consensus 79 ~~~GdrV-~~~---------------------------g-~~-------------------~G~~aey~~v~~~~~~~iP 110 (327)
T 1qor_A 79 IKAGDRV-VYA---------------------------Q-SA-------------------LGAYSSVHNIIADKAAILP 110 (327)
T ss_dssp CCTTCEE-EES---------------------------C-CS-------------------SCCSBSEEEEEGGGEEECC
T ss_pred CCCCCEE-EEC---------------------------C-CC-------------------CceeeeEEEecHHHcEECC
Confidence 9999999 321 0 00 1589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.+
T Consensus 111 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~ 189 (327)
T 1qor_A 111 AAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQV 189 (327)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEE
T ss_pred CCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 999999999999999999999877889999999999996 9999999999999999 99999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhc-ceeEEe
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILK-GRSVCG 328 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~-~~~i~g 328 (390)
+++.+ .++.+.+.+.+.+ ++|++||++|. ..++.++++++++ |+++.+|..... ..+++... +.+ .+++.+
T Consensus 190 ~~~~~---~~~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (327)
T 1qor_A 190 INYRE---EDLVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSSGA-VTGVNLGILNQKGSLYVTR 263 (327)
T ss_dssp EETTT---SCHHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTTCC-CCCBCTHHHHHTTSCEEEC
T ss_pred EECCC---ccHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhcCC-CEEEEEecCCCC-CCccCHHHHhhccceEEEc
Confidence 98876 6888889888877 89999999994 4599999999999 999999965432 22344333 334 566665
Q ss_pred eecCCCC-----chhhHHHHHHHHHcCCCCCcccee--eeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 329 TYFGGLK-----PRSDIATLAQKYLDKELNLGEFIT--HEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 329 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~--~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
...+.+. ..+.++++++++++|++++ .++ ++|+|+++++|++.+.++... |+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 327 (327)
T 1qor_A 264 PSLQGYITTREELTEASNELFSLIASGVIKV--DVAEQQKYPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_dssp CCHHHHCCSHHHHHHHHHHHHHHHHTTSSCC--CCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred cchhhhcCCHHHHHHHHHHHHHHHHCCCccc--ccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 4321111 1356789999999998765 477 899999999999999887654 999864
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-47 Score=360.37 Aligned_cols=308 Identities=17% Similarity=0.156 Sum_probs=262.0
Q ss_pred ceeeEEEeecC--C----CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccc----eeEEE
Q 016363 14 IRCKAAICRIP--G----KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHE----AVGVV 83 (390)
Q Consensus 14 ~t~~a~~~~~~--~----~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e----~~G~V 83 (390)
++|||+++++. + +.+++.++|.|+|++|||||||++++||++|+..+.+.... .+|.++||| ++|+|
T Consensus 6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~---~~p~~~G~e~g~~~~G~V 82 (336)
T 4b7c_A 6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSY---IPPVGIGEVMRALGVGKV 82 (336)
T ss_dssp CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCS---SCCCCTTSBCCCEEEEEE
T ss_pred ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccccc---CCCCCCCcccCCceEEEE
Confidence 78999999861 1 23999999999999999999999999999999888764322 356677777 89999
Q ss_pred EEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEe
Q 016363 84 ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV 163 (390)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v 163 (390)
++. ++++|++||||++. |+|+||+++
T Consensus 83 ~~~--~v~~~~vGdrV~~~----------------------------------------------------G~~aey~~v 108 (336)
T 4b7c_A 83 LVS--KHPGFQAGDYVNGA----------------------------------------------------LGVQDYFIG 108 (336)
T ss_dssp EEE--CSTTCCTTCEEEEE----------------------------------------------------CCSBSEEEE
T ss_pred Eec--CCCCCCCCCEEecc----------------------------------------------------CCceEEEEe
Confidence 995 57899999999863 489999999
Q ss_pred eCCceEEcCCCCCcchh--hccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 164 DITHVVKITPHIPLGIA--CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 164 ~~~~v~~~p~~~~~~~a--a~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
|++.++++|+++++.++ ++++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.
T Consensus 109 ~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~ 187 (336)
T 4b7c_A 109 EPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKC 187 (336)
T ss_dssp CCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHH
T ss_pred chHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 99999999999988876 7789999999999988999999999999998 9999999999999999 999999999999
Q ss_pred HHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC-----CCcc
Q 016363 241 EIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-----SPIS 314 (390)
Q Consensus 241 ~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~ 314 (390)
+.+ +++|+++++++.+ .++.+.+.+.+++++|++||++|+.. +..++++++++ |+++.+|..... ...+
T Consensus 188 ~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~ 262 (336)
T 4b7c_A 188 RFLVEELGFDGAIDYKN---EDLAAGLKRECPKGIDVFFDNVGGEI-LDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGP 262 (336)
T ss_dssp HHHHHTTCCSEEEETTT---SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEECCCGGGGC------CC
T ss_pred HHHHHHcCCCEEEECCC---HHHHHHHHHhcCCCceEEEECCCcch-HHHHHHHHhhC-CEEEEEeecccccCCcccccc
Confidence 999 8999999999877 78999999988669999999999765 89999999999 999999965421 1123
Q ss_pred cchHhh-hcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 315 LNSIEI-LKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 315 ~~~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
++...+ .+++++.|+....+. ..++++++++++++|++++. +..+|+|+++++||+.+.+++.. |+|+++
T Consensus 263 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 336 (336)
T 4b7c_A 263 ANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSR--EDIVEGLETFPETLLKLFSGENFGKLVLKV 336 (336)
T ss_dssp TTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred hhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccc--eeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 333333 458999998765432 23678999999999988877 44568999999999999988775 999975
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-48 Score=367.04 Aligned_cols=319 Identities=17% Similarity=0.189 Sum_probs=256.5
Q ss_pred ccceeeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCC
Q 016363 12 KVIRCKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
|+.+|||+++++++. .++++++|.|+|++|||+|||.++|||++|++.+.|..+.. ..+|.++|||++|+|+++|
T Consensus 1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~i~G~E~~G~V~~~~-- 77 (330)
T 1tt7_A 1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIV-REYPLILGIDAAGTVVSSN-- 77 (330)
T ss_dssp -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTC-SSCSEECCSEEEEEEEECS--
T ss_pred CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCc-CCCCccccceEEEEEEEcC--
Confidence 577899999999873 48999999999999999999999999999999998865432 2589999999999999974
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceE
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 169 (390)
+++|++||||++.... .|...+ |+|+||++++++.++
T Consensus 78 v~~~~vGdrV~~~~~~------------------------~g~~~~-------------------G~~aey~~v~~~~~~ 114 (330)
T 1tt7_A 78 DPRFAEGDEVIATSYE------------------------LGVSRD-------------------GGLSEYASVPGDWLV 114 (330)
T ss_dssp STTCCTTCEEEEESTT------------------------BTTTBC-------------------CSSBSSEEECGGGEE
T ss_pred CCCCCCCCEEEEcccc------------------------cCCCCC-------------------ccceeEEEecHHHeE
Confidence 5889999999875310 122222 589999999999999
Q ss_pred EcCCCCCcchhhccccchhhHHHHHH--HHhCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 170 KITPHIPLGIACLLSCGVSTGVGAAW--KVAGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 170 ~~p~~~~~~~aa~~~~~~~tA~~~l~--~~~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
++|+++++++||.+++++.|||.++. +..++++|+ +|||+|+ |++|++++|+|+.+|+ +|+++++++++++++++
T Consensus 115 ~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~ 193 (330)
T 1tt7_A 115 PLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQ 193 (330)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHH
T ss_pred ECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 99999999999999999999998764 457899997 9999998 9999999999999999 89999999999999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcce
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGR 324 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~ 324 (390)
+|+++++++.+ .+ .+.+++++++++|+||||+|+.. ++.++++++++ |+++.+|.... ...+++...+ .+++
T Consensus 194 lGa~~v~~~~~---~~-~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~ 266 (330)
T 1tt7_A 194 LGASEVISRED---VY-DGTLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYG-GSVAVSGLTGG-GEVPATVYPFILRGV 266 (330)
T ss_dssp HTCSEEEEHHH---HC-SSCCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEE-EEEEECCCSSC-SCEEECSHHHHTSCC
T ss_pred cCCcEEEECCC---ch-HHHHHHhhcCCccEEEECCcHHH-HHHHHHhhcCC-CEEEEEecCCC-CccCcchHHHHhcCe
Confidence 99999987643 11 11223344448999999999964 99999999999 99999997543 2334444433 4589
Q ss_pred eEEeeecCCCCc---hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 325 SVCGTYFGGLKP---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 325 ~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
++.|+....... .+.++++++++++++++ ++++++|+|+++++|++.+.++... |+++++
T Consensus 267 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 330 (330)
T 1tt7_A 267 SLLGIDSVYCPMDVRAAVWERMSSDLKPDQLL--TIVDREVSLEETPGALKDILQNRIQGRVIVKL 330 (330)
T ss_dssp EEEECCSSSCCHHHHHHHHHHTTTTSCCSCST--TSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred EEEEEeccccCHHHHHHHHHHHHHHHhcCCcc--cccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 999985332221 23456666777778654 5578999999999999999877654 999864
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=361.65 Aligned_cols=320 Identities=20% Similarity=0.225 Sum_probs=258.3
Q ss_pred CCCccceeeEEEeecCCCC--cEE-EEeecCCC-CCCeEEEEEeeeecccccccccccCCC-------------CCCCCC
Q 016363 9 KAGKVIRCKAAICRIPGKP--LVI-EEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTD-------------LPKLPL 71 (390)
Q Consensus 9 ~~~~~~t~~a~~~~~~~~~--~~~-~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~-------------~~~~~~ 71 (390)
.+.++++|||+++.+++.+ +++ +++|.|+| ++|||+|||.++|||++|++++.|..+ .....+
T Consensus 15 ~~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 94 (375)
T 2vn8_A 15 TENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEF 94 (375)
T ss_dssp ---CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTC
T ss_pred ccccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccC
Confidence 3457889999999999754 888 89999984 999999999999999999999988531 111148
Q ss_pred CcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecc
Q 016363 72 PVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHF 151 (390)
Q Consensus 72 p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~ 151 (390)
|.++|||++|+|+++|++|++|++||+|++.+. ...
T Consensus 95 P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~---------------------------~~~----------------- 130 (375)
T 2vn8_A 95 PLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP---------------------------PWK----------------- 130 (375)
T ss_dssp SBCCCCEEEEEEEEECTTCCSCCTTCEEEEECC---------------------------TTS-----------------
T ss_pred CcccceeeeEEEEEeCCCCCCCCCCCEEEEecC---------------------------CCC-----------------
Confidence 999999999999999999999999999987532 011
Q ss_pred ccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhC----CCCCCEEEEEcC-ChHHHHHHHHHHHcC
Q 016363 152 LNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG----VEVGSTVAIFGL-GAVGLAVAEGARLNR 226 (390)
Q Consensus 152 ~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~----~~~g~~VlI~Ga-g~vG~~ai~la~~~g 226 (390)
.|+|+||++++++.++++|+++++++||+++++++|||+++.+.++ +++|++|||+|+ |++|++++|+|+.+|
T Consensus 131 --~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~G 208 (375)
T 2vn8_A 131 --QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWD 208 (375)
T ss_dssp --CCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTT
T ss_pred --CccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCC
Confidence 1589999999999999999999999999999999999999877788 999999999996 999999999999999
Q ss_pred CCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh-HHHHHHHHHhccCCceEEEEc
Q 016363 227 ASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 227 ~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 305 (390)
+ +|++++ ++++.++++++|++.++++.+ .++.+.+.+. +++|+||||+|+. ..++.++++++++ |+++.+|
T Consensus 209 a-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g 280 (375)
T 2vn8_A 209 A-HVTAVC-SQDASELVRKLGADDVIDYKS---GSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLV 280 (375)
T ss_dssp C-EEEEEE-CGGGHHHHHHTTCSEEEETTS---SCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESC
T ss_pred C-EEEEEe-ChHHHHHHHHcCCCEEEECCc---hHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeC
Confidence 9 999998 678999999999999999876 6787777653 4899999999998 4568889999999 9999998
Q ss_pred ccCCCCC----cccch----Hhh-h-------cceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHH
Q 016363 306 VEMHGSP----ISLNS----IEI-L-------KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINK 369 (390)
Q Consensus 306 ~~~~~~~----~~~~~----~~~-~-------~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 369 (390)
....... +.... ..+ . ++..+..... ....+.++++++++++|+++ ++++++|+|+++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~ 356 (375)
T 2vn8_A 281 TPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR--PVIEQTFPFSKVPE 356 (375)
T ss_dssp CSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHH
T ss_pred CCcccccccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc--cCcCeEECHHHHHH
Confidence 5432100 00000 011 1 2333332211 12356789999999999875 56889999999999
Q ss_pred HHHHHhcCCce-EEEEec
Q 016363 370 AFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 370 A~~~~~~~~~~-kvvl~~ 386 (390)
|++.+.++... |+|+++
T Consensus 357 A~~~~~~~~~~gKvvi~~ 374 (375)
T 2vn8_A 357 AFLKVERGHARGKTVINV 374 (375)
T ss_dssp HHHHHHHCCCSSEEEEEC
T ss_pred HHHHHHcCCCCCeEEEEe
Confidence 99999887654 999975
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-47 Score=359.15 Aligned_cols=316 Identities=15% Similarity=0.165 Sum_probs=250.8
Q ss_pred ceeeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 14 IRCKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 14 ~t~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
.+|||+++++++. .++++++|.|+|++|||+|||.+++||++|++.+.|..+.. ..+|.++|||++|+|+++ +++
T Consensus 2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~G~E~~G~V~~~--~v~ 78 (328)
T 1xa0_A 2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIV-KTYPFVPGIDLAGVVVSS--QHP 78 (328)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSC-CSSSBCCCSEEEEEEEEC--CSS
T ss_pred CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCC-CCCCcccCcceEEEEEec--CCC
Confidence 4799999999874 38899999999999999999999999999999998865432 258999999999999996 468
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
+|++||||++.... .|...+ |+|+||+++|++.++++
T Consensus 79 ~~~vGdrV~~~~~~------------------------~g~~~~-------------------G~~aey~~v~~~~~~~~ 115 (328)
T 1xa0_A 79 RFREGDEVIATGYE------------------------IGVTHF-------------------GGYSEYARLHGEWLVPL 115 (328)
T ss_dssp SCCTTCEEEEESTT------------------------BTTTBC-------------------CSSBSEEEECGGGCEEC
T ss_pred CCCCCCEEEEcccc------------------------CCCCCC-------------------ccceeEEEechHHeEEC
Confidence 89999999875310 122222 58999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHH--HHhCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAW--KVAGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~--~~~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
|+++++++|+++++++.|||.++. +..++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|
T Consensus 116 P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lG 194 (328)
T 1xa0_A 116 PKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLG 194 (328)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTT
T ss_pred CCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcC
Confidence 999999999999999999998764 457899997 9999998 9999999999999999 8999999999999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeE
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSV 326 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i 326 (390)
+++++++.+ .+ .+.+++++++++|+||||+|+.. ++.++++++++ |+++.+|.... ...+++... +.+++++
T Consensus 195 a~~~i~~~~---~~-~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i 267 (328)
T 1xa0_A 195 AKEVLARED---VM-AERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVSGLTGG-AEVPTTVHPFILRGVSL 267 (328)
T ss_dssp CSEEEECC-------------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEECSCCSS-SCCCCCSHHHHHTTCEE
T ss_pred CcEEEecCC---cH-HHHHHHhcCCcccEEEECCcHHH-HHHHHHhhccC-CEEEEEeecCC-CCCCCchhhhhhcCceE
Confidence 999998765 22 33455555558999999999965 89999999999 99999997542 223344333 3458999
Q ss_pred EeeecCCCCc---hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 327 CGTYFGGLKP---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 327 ~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
.|+....... .+.++.++++++++ ++ + ++++|+|+++++|++.+.++... |++++++
T Consensus 268 ~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~--~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 328 (328)
T 1xa0_A 268 LGIDSVYCPMDLRLRIWERLAGDLKPD-LE--R-IAQEISLAELPQALKRILRGELRGRTVVRLA 328 (328)
T ss_dssp EECCSSSCCHHHHHHHHHHHHTTTCCC-HH--H-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred EEEecccCCHHHHHHHHHHHHHHHHcC-Cc--e-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence 9874332221 23455566666666 43 3 35999999999999999887654 9999874
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-46 Score=355.75 Aligned_cols=316 Identities=16% Similarity=0.225 Sum_probs=264.1
Q ss_pred CccceeeEEEe-ecC---CC----CcEEEEeecCCC-CCCeEEEEEeeeecccccccccccC----CCCCCCCCCccccc
Q 016363 11 GKVIRCKAAIC-RIP---GK----PLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSS----TDLPKLPLPVIFGH 77 (390)
Q Consensus 11 ~~~~t~~a~~~-~~~---~~----~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~----~~~~~~~~p~~~G~ 77 (390)
.+|++|||+++ .++ |. .+++.++|.|+| ++|||+|||.++|||++|++.+.+. .... ..+|.++||
T Consensus 4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~-~~~p~v~G~ 82 (357)
T 2zb4_A 4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITP-WQLSQVVDG 82 (357)
T ss_dssp --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCC-CCBTSBCEE
T ss_pred cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCC-CCCCccccc
Confidence 57899999999 565 43 399999999998 9999999999999999999877752 2111 257899999
Q ss_pred ceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccccccc
Q 016363 78 EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 157 (390)
Q Consensus 78 e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~ 157 (390)
|++|+|++ ++|++|++||||++.. |+|
T Consensus 83 E~~G~V~~--~~v~~~~vGdrV~~~~---------------------------------------------------G~~ 109 (357)
T 2zb4_A 83 GGIGIIEE--SKHTNLTKGDFVTSFY---------------------------------------------------WPW 109 (357)
T ss_dssp EEEEEEEE--ECSTTCCTTCEEEEEE---------------------------------------------------EES
T ss_pred cEEEEEEe--cCCCCCCCCCEEEecC---------------------------------------------------CCc
Confidence 99999999 8899999999998642 489
Q ss_pred ceeEEeeCCceEEcCCCC-----CcchhhccccchhhHHHHHHHHhCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCe
Q 016363 158 TEYSVVDITHVVKITPHI-----PLGIACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASK 229 (390)
Q Consensus 158 a~~~~v~~~~v~~~p~~~-----~~~~aa~~~~~~~tA~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~ 229 (390)
+||++++++.++++|+++ +++ +++++++++|||+++.+.+++++| ++|||+|+ |++|++++|+++..|+++
T Consensus 110 aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~ 188 (357)
T 2zb4_A 110 QTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSR 188 (357)
T ss_dssp BSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSE
T ss_pred EEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCe
Confidence 999999999999999999 555 778888999999999888999999 99999998 999999999999999878
Q ss_pred EEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 230 IIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 230 Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
|+++++++++.+.+++ +|++.++++.+ .++.+.+.+.+.+++|++|||+|+.. ++.++++++++ |+++.+|...
T Consensus 189 Vi~~~~~~~~~~~~~~~~g~~~~~d~~~---~~~~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~-G~iv~~G~~~ 263 (357)
T 2zb4_A 189 VVGICGTHEKCILLTSELGFDAAINYKK---DNVAEQLRESCPAGVDVYFDNVGGNI-SDTVISQMNEN-SHIILCGQIS 263 (357)
T ss_dssp EEEEESCHHHHHHHHHTSCCSEEEETTT---SCHHHHHHHHCTTCEEEEEESCCHHH-HHHHHHTEEEE-EEEEECCCGG
T ss_pred EEEEeCCHHHHHHHHHHcCCceEEecCc---hHHHHHHHHhcCCCCCEEEECCCHHH-HHHHHHHhccC-cEEEEECCcc
Confidence 9999999999999887 99999998876 68888898887768999999999754 89999999999 9999999654
Q ss_pred CC-CCcccc--------hHhhhcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcC
Q 016363 309 HG-SPISLN--------SIEILKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 377 (390)
Q Consensus 309 ~~-~~~~~~--------~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~ 377 (390)
.. ..+++. ...+.+++++.|+....+. ..++++++++++++|++++.. ..+|+|+++++||+.+.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~~~~~~ 341 (357)
T 2zb4_A 264 QYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKE--TVINGLENMGAAFQSMMTG 341 (357)
T ss_dssp GTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCE--EEEECGGGHHHHHHHHHTT
T ss_pred ccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCcc--ceecCHHHHHHHHHHHHcC
Confidence 32 122222 1223458899988653321 246789999999999988763 4569999999999999887
Q ss_pred Cc-eEEEEecCC
Q 016363 378 KS-LRCIIWMDK 388 (390)
Q Consensus 378 ~~-~kvvl~~~~ 388 (390)
.. +|+|+++++
T Consensus 342 ~~~gKvvi~~~~ 353 (357)
T 2zb4_A 342 GNIGKQIVCISE 353 (357)
T ss_dssp CCSBEEEEECCC
T ss_pred CCCceEEEEEec
Confidence 65 499999875
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=362.35 Aligned_cols=316 Identities=15% Similarity=0.176 Sum_probs=256.2
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-------------------------
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------------------------- 66 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~------------------------- 66 (390)
.+++||+++.......++++++|.|+|++|||||||.+++||++|+++++|..+.
T Consensus 4 ~~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~ 83 (379)
T 3iup_A 4 SALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRS 83 (379)
T ss_dssp EEEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHH
T ss_pred chhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccc
Confidence 4678999988654445999999999999999999999999999999999885210
Q ss_pred --CCCCCCcccccceeEEEEEeCCCC-CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccc
Q 016363 67 --PKLPLPVIFGHEAVGVVESVGEYV-EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 143 (390)
Q Consensus 67 --~~~~~p~~~G~e~~G~V~~vG~~v-~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~ 143 (390)
....+|.++|||++|+|+++|++| ++|++||+|++.+.
T Consensus 84 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~--------------------------------------- 124 (379)
T 3iup_A 84 MAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGG--------------------------------------- 124 (379)
T ss_dssp HGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCS---------------------------------------
T ss_pred cccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCC---------------------------------------
Confidence 012578999999999999999999 88999999987532
Q ss_pred cCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEc--CChHHHHHHHH
Q 016363 144 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG--LGAVGLAVAEG 221 (390)
Q Consensus 144 ~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~G--ag~vG~~ai~l 221 (390)
|+|+||+++|++.++++|+++++++|+++++..+|||+++ +... ++|++|||+| +|++|++++|+
T Consensus 125 -----------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~ 191 (379)
T 3iup_A 125 -----------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQI 191 (379)
T ss_dssp -----------CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHH
T ss_pred -----------CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHH
Confidence 5899999999999999999999999999999999999766 5555 8999999994 49999999999
Q ss_pred HHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhc-----
Q 016363 222 ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR----- 295 (390)
Q Consensus 222 a~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~----- 295 (390)
|+.+|+ +||+++++++|+++++++|+++++++.+ .++.+.+++++++ ++|+||||+|+....+.++++++
T Consensus 192 a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r 267 (379)
T 3iup_A 192 CLKDGI-KLVNIVRKQEQADLLKAQGAVHVCNAAS---PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNK 267 (379)
T ss_dssp HHHHTC-CEEEEESSHHHHHHHHHTTCSCEEETTS---TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHT
T ss_pred HHHCCC-EEEEEECCHHHHHHHHhCCCcEEEeCCC---hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhc
Confidence 999999 8999999999999999999999999887 7899999999988 99999999998776788888885
Q ss_pred cC----------CceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCC---ch----hhHHHHHHHHHcCCCCCccce
Q 016363 296 EG----------WGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK---PR----SDIATLAQKYLDKELNLGEFI 358 (390)
Q Consensus 296 ~~----------~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~i 358 (390)
++ +|+++.+|... ....++.. .+.+++++.|+.++.+. .. +.++++++++.+ + +.+.+
T Consensus 268 ~~G~~~~~G~~~~g~iv~~G~~~-~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--l~~~i 342 (379)
T 3iup_A 268 SAREYSRYGSTTHKQVYLYGGLD-TSPTEFNR-NFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-T--FASHY 342 (379)
T ss_dssp TCCSCCTTCCCSCEEEEECCCSE-EEEEEECC-CSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-T--TCCCC
T ss_pred cccceeecccccCceEEEecCCC-CCcccccc-ccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-c--CCCcc
Confidence 33 04444444322 11222322 24458889887654431 12 233555566655 3 45568
Q ss_pred eeeeccccH--HHHHHHHhcCCce-EEEEecCC
Q 016363 359 THEVSFHDI--NKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 359 ~~~~~l~~~--~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
+++|+|+++ ++||+.+.++... |+|+++++
T Consensus 343 ~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~ 375 (379)
T 3iup_A 343 SKEISLAEVLDLDMIAVYNKRATGEKYLINPNK 375 (379)
T ss_dssp SEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred eEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence 899999999 9999999988765 99999875
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=336.42 Aligned_cols=295 Identities=19% Similarity=0.252 Sum_probs=243.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++++++++..+++.|.|+|++|||+|||.+++||++|++++.|..+.. ..+|.++|||++|+|+
T Consensus 1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~i~G~e~~G~V~----------- 68 (302)
T 1iz0_A 1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTR-LHPPFIPGMEVVGVVE----------- 68 (302)
T ss_dssp CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC-CCSSBCCCCEEEEEET-----------
T ss_pred CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC-CCCCCcccceEEEEEE-----------
Confidence 7999999998865677889999999999999999999999999999865542 2589999999999998
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||||++... .|+|+||++++++.++++|+++
T Consensus 69 GdrV~~~~~-------------------------------------------------~G~~aey~~v~~~~~~~iP~~~ 99 (302)
T 1iz0_A 69 GRRYAALVP-------------------------------------------------QGGLAERVAVPKGALLPLPEGL 99 (302)
T ss_dssp TEEEEEECS-------------------------------------------------SCCSBSEEEEEGGGCEECCTTC
T ss_pred CcEEEEecC-------------------------------------------------CcceeeEEEEcHHHcEeCCCCC
Confidence 999987531 1589999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++++||+++++++|||+++.+.. +++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++++
T Consensus 100 ~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~ 177 (302)
T 1iz0_A 100 SPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATY 177 (302)
T ss_dssp CHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred CHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEEC
Confidence 99999999999999999987677 999999999998 9999999999999999 99999999999999999999998875
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 333 (390)
.+ ..++.+.+ +++|+||| +|+.. ++.++++++++ |+++.+|..... ..+++... +.+++++.|+.++.
T Consensus 178 ~~--~~~~~~~~-----~~~d~vid-~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~ 246 (302)
T 1iz0_A 178 AE--VPERAKAW-----GGLDLVLE-VRGKE-VEESLGLLAHG-GRLVYIGAAEGE-VAPIPPLRLMRRNLAVLGFWLTP 246 (302)
T ss_dssp GG--HHHHHHHT-----TSEEEEEE-CSCTT-HHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHH
T ss_pred Cc--chhHHHHh-----cCceEEEE-CCHHH-HHHHHHhhccC-CEEEEEeCCCCC-CCCcCHHHHHhCCCeEEEEeccc
Confidence 32 01333333 58999999 99854 89999999999 999999965432 11333333 45589999986532
Q ss_pred C-CchhhHHHHHH---HHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 334 L-KPRSDIATLAQ---KYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 334 ~-~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
. ...++++++++ ++++|+++ +.++++|+|+++++|++.+.++... |+++++
T Consensus 247 ~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 302 (302)
T 1iz0_A 247 LLREGALVEEALGFLLPRLGRELR--PVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302 (302)
T ss_dssp HTTCHHHHHHHHHHHGGGBTTTBC--CCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred hhhhHHHHHHHHhhhHHHHcCCcc--cccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1 12567899999 99999775 4588999999999999999877654 999864
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=327.91 Aligned_cols=308 Identities=20% Similarity=0.226 Sum_probs=252.3
Q ss_pred ccceeeEEEeecC--C----CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 12 KVIRCKAAICRIP--G----KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 12 ~~~t~~a~~~~~~--~----~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
.+++||++++.++ + +.+++.++|.|+|++|||+|||.++|||+.|... . ... .+|.++|||++|+|++
T Consensus 4 ~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~--~~p~~~g~e~~G~Vv~ 77 (333)
T 1v3u_A 4 FMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRL--KEGAVMMGQQVARVVE 77 (333)
T ss_dssp CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTC--CTTSBCCCCEEEEEEE
T ss_pred ccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcC--CCCcccccceEEEEEe
Confidence 4678999999885 3 2389999999999999999999999999988732 1 112 5788999999999999
Q ss_pred eCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
. ++++|++||||++. |+|+||++++.
T Consensus 78 ~--~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~ 103 (333)
T 1v3u_A 78 S--KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDG 103 (333)
T ss_dssp E--SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEESS
T ss_pred c--CCCCCCCCCEEEec----------------------------------------------------CceEEEEEech
Confidence 5 57889999999863 47999999999
Q ss_pred CceEEcCCC----CCcch-hhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 166 THVVKITPH----IPLGI-ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 166 ~~v~~~p~~----~~~~~-aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
+.++++|++ +++++ +++++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++
T Consensus 104 ~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~ 182 (333)
T 1v3u_A 104 KGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEK 182 (333)
T ss_dssp TTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHH
T ss_pred HHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHH
Confidence 999999997 88888 48899999999999878889999999999998 9999999999999999 99999999999
Q ss_pred HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCC----C-cc
Q 016363 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS----P-IS 314 (390)
Q Consensus 240 ~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~----~-~~ 314 (390)
.+.++++|++.++|..+ ..++.+.+.+.+.+++|++||++|... +..++++++++ |+++.+|...... . ..
T Consensus 183 ~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~ 258 (333)
T 1v3u_A 183 IAYLKQIGFDAAFNYKT--VNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPG 258 (333)
T ss_dssp HHHHHHTTCSEEEETTS--CSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEECCCCC-------CCBC
T ss_pred HHHHHhcCCcEEEecCC--HHHHHHHHHHHhCCCCeEEEECCChHH-HHHHHHHHhcC-CEEEEEeccccccCCCCCCCC
Confidence 99999999998887653 247888888877668999999999865 89999999999 9999999654311 1 11
Q ss_pred cchHh-hhcceeEEeeecCCCC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 315 LNSIE-ILKGRSVCGTYFGGLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 315 ~~~~~-~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+... +.+++++.|+..+.+. ..+.++++++++++|++++... .+++|+++++||+.+.++... |+++++
T Consensus 259 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 333 (333)
T 1v3u_A 259 PSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH--VTKGFENMPAAFIEMLNGANLGKAVVTA 333 (333)
T ss_dssp CCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEE--EEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred cCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccc--cccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 23333 3458999998655432 1456888999999998887643 457999999999999887654 999864
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=332.59 Aligned_cols=316 Identities=19% Similarity=0.194 Sum_probs=254.8
Q ss_pred ccceeeEEEeecC-----CC-CcEEE--EeecCC-CCCCeEEEEEeeeecccccccccccCCCCCC--CCCCccccccee
Q 016363 12 KVIRCKAAICRIP-----GK-PLVIE--EIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--LPLPVIFGHEAV 80 (390)
Q Consensus 12 ~~~t~~a~~~~~~-----~~-~~~~~--~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~ 80 (390)
||+|||++++... +. .++++ +++.|. |++|||||||.++++|+.|. .+.|...... ..+|.++|||++
T Consensus 1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~ 79 (345)
T 2j3h_A 1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ 79 (345)
T ss_dssp CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence 5778898888764 32 38887 888886 89999999999999998875 4445432210 136889999999
Q ss_pred EEEEE--eCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccc
Q 016363 81 GVVES--VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT 158 (390)
Q Consensus 81 G~V~~--vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a 158 (390)
|+|++ +|+++++|++||||++. |+|+
T Consensus 80 G~~~~GvV~~~v~~~~vGdrV~~~----------------------------------------------------g~~a 107 (345)
T 2j3h_A 80 GYGVSRIIESGHPDYKKGDLLWGI----------------------------------------------------VAWE 107 (345)
T ss_dssp EEEEEEEEEECSTTCCTTCEEEEE----------------------------------------------------EESB
T ss_pred cceEEEEEecCCCCCCCCCEEEee----------------------------------------------------cCce
Confidence 99999 99999999999999863 4799
Q ss_pred eeEEeeCCc--eEEcCC---CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE
Q 016363 159 EYSVVDITH--VVKITP---HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIG 232 (390)
Q Consensus 159 ~~~~v~~~~--v~~~p~---~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~ 232 (390)
||++++++. ++++|+ +++++ +++++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|++
T Consensus 108 ey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~ 185 (345)
T 2j3h_A 108 EYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVG 185 (345)
T ss_dssp SEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred eEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEE
Confidence 999998876 999996 35555 67888899999999878899999999999998 9999999999999999 9999
Q ss_pred ecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC-
Q 016363 233 VDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG- 310 (390)
Q Consensus 233 ~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~- 310 (390)
+++++++.+.++ ++|++.++++.+ ..++.+.+++.+++++|++||++|+. .++.++++++++ |+++.+|.....
T Consensus 186 ~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~ 261 (345)
T 2j3h_A 186 SAGSKEKVDLLKTKFGFDDAFNYKE--ESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMH-GRIAVCGMISQYN 261 (345)
T ss_dssp EESSHHHHHHHHHTSCCSEEEETTS--CSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEE-EEEEECCCGGGTT
T ss_pred EeCCHHHHHHHHHHcCCceEEecCC--HHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcC-CEEEEEccccccc
Confidence 999999999998 799999988764 23677888887755899999999985 489999999999 999999965431
Q ss_pred ---CCcccchHh-hhcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEE
Q 016363 311 ---SPISLNSIE-ILKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 383 (390)
Q Consensus 311 ---~~~~~~~~~-~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 383 (390)
....++... +.+++++.|+...... ..+.++++++++++|++++ .++++|+|+++++||+.+.++... |++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvv 339 (345)
T 2j3h_A 262 LENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITY--VEDVADGLEKAPEALVGLFHGKNVGKQV 339 (345)
T ss_dssp CSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCC--CEEEEESGGGSHHHHHHHHTTCCSSEEE
T ss_pred cCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcC--cccccCCHHHHHHHHHHHHcCCCceEEE
Confidence 122333333 3448889887554321 1345889999999998774 466789999999999999887765 999
Q ss_pred EecCC
Q 016363 384 IWMDK 388 (390)
Q Consensus 384 l~~~~ 388 (390)
+.+++
T Consensus 340 v~~~~ 344 (345)
T 2j3h_A 340 VVVAR 344 (345)
T ss_dssp EESSC
T ss_pred EEeCC
Confidence 99875
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=374.48 Aligned_cols=305 Identities=18% Similarity=0.187 Sum_probs=258.1
Q ss_pred eEEEeecCCCC--cEEEEeec--CCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 17 KAAICRIPGKP--LVIEEIEV--EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 17 ~a~~~~~~~~~--~~~~~~~~--p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
..+.+..+|.+ +++.+.+. |+|++|||+|||.++|||++|++++.|..+ .|.++|||++|+|+++|++|++
T Consensus 211 ~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~-----~~~~lG~E~aG~V~~vG~~V~~ 285 (795)
T 3slk_A 211 WRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP-----GVASLGSEGAGVVVETGPGVTG 285 (795)
T ss_dssp CCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS-----SCCCSCCCEEEEEEEECSSCCS
T ss_pred EEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC-----CCccccceeEEEEEEeCCCCCc
Confidence 44666677654 78877764 568999999999999999999999988653 4567999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||||++... |+|+||++++.+.++++|
T Consensus 286 ~~vGDrV~~~~~--------------------------------------------------G~~ae~~~v~~~~~~~iP 315 (795)
T 3slk_A 286 LAPGDRVMGMIP--------------------------------------------------KAFGPLAVADHRMVTRIP 315 (795)
T ss_dssp SCTTCEEEECCS--------------------------------------------------SCSSSEEEEETTSEEECC
T ss_pred CCCCCEEEEEec--------------------------------------------------CCCcCEEEeehHHEEECC
Confidence 999999987432 589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +||++++++ |.+.++ +|++++
T Consensus 316 ~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v 392 (795)
T 3slk_A 316 AGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHL 392 (795)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGE
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhhe
Confidence 999999999999999999999888899999999999997 9999999999999999 899999665 666666 999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (390)
+++.+ .++.+.+++.+++ |+|+|||++|++. ++.++++++++ |+++.+|......... .....+++++.+..
T Consensus 393 ~~~~~---~~~~~~i~~~t~g~GvDvVld~~gg~~-~~~~l~~l~~~-Gr~v~iG~~~~~~~~~--~~~~~~~~~~~~~~ 465 (795)
T 3slk_A 393 ASSRT---CDFEQQFLGATGGRGVDVVLNSLAGEF-ADASLRMLPRG-GRFLELGKTDVRDPVE--VADAHPGVSYQAFD 465 (795)
T ss_dssp ECSSS---STHHHHHHHHSCSSCCSEEEECCCTTT-THHHHTSCTTC-EEEEECCSTTCCCHHH--HHHHSSSEEEEECC
T ss_pred eecCC---hhHHHHHHHHcCCCCeEEEEECCCcHH-HHHHHHHhcCC-CEEEEeccccccCccc--ccccCCCCEEEEee
Confidence 99887 7899999999998 9999999999876 89999999999 9999999654322211 12223477777665
Q ss_pred cCCCC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 331 FGGLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 331 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
+.... ..+.++++++++++|++++ +++++|+++++++||+.+.++... |+|+++++
T Consensus 466 l~~~~~~~~~~~l~~~~~l~~~g~l~p--~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~ 525 (795)
T 3slk_A 466 TVEAGPQRIGEMLHELVELFEGRVLEP--LPVTAWDVRQAPEALRHLSQARHVGKLVLTMPP 525 (795)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHTTSCCC--CCEEEEEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred ccccCHHHHHHHHHHHHHHHHcCCcCC--CcceeEcHHHHHHHHHHHhcCCccceEEEecCc
Confidence 43211 1356889999999998765 477999999999999999988876 99999764
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-33 Score=317.46 Aligned_cols=294 Identities=15% Similarity=0.125 Sum_probs=237.9
Q ss_pred cEEEEeecCC-CC--CCeEEEEEeeeecccccccccccCCCCCC-----CCCCcccccceeEEEEEeCCCCCcCCCCCEE
Q 016363 28 LVIEEIEVEP-PK--AWEIRIKILCTSLCHSDVTFWKSSTDLPK-----LPLPVIFGHEAVGVVESVGEYVEEVKERDLV 99 (390)
Q Consensus 28 ~~~~~~~~p~-~~--~~evlV~v~~~~i~~~D~~~~~g~~~~~~-----~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V 99 (390)
+.+.+.+... +. ++||+|+|.++|+|+.|+++..|..+... ...|.++|+|++|+|. +||+|
T Consensus 1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV 1613 (2512)
T 2vz8_A 1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRV 1613 (2512)
T ss_dssp EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCE
T ss_pred eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEE
Confidence 6666554333 33 79999999999999999999988654220 1346789999999883 79999
Q ss_pred eeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcch
Q 016363 100 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179 (390)
Q Consensus 100 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~ 179 (390)
+++.. .|+|++|+++|++.++++|+++++++
T Consensus 1614 ~g~~~-------------------------------------------------~G~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A 1614 MGMVP-------------------------------------------------AEGLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp EEECS-------------------------------------------------SCCSBSEEECCGGGEEECCTTSCHHH
T ss_pred EEeec-------------------------------------------------CCceeeEEEcccceEEEeCCCCCHHH
Confidence 87532 15899999999999999999999999
Q ss_pred hhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcC
Q 016363 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINP 254 (390)
Q Consensus 180 aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~ 254 (390)
||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +||+++++++|.+.+++ +|+++++++
T Consensus 1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~ 1723 (2512)
T 2vz8_A 1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANS 1723 (2512)
T ss_dssp HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEES
T ss_pred HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecC
Confidence 99999999999999988899999999999987 9999999999999999 99999999999999986 788999998
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
.+ .++.+.+++.+++ |+|+|||++++.. +..++++++++ |+++.+|..............+.+++++.++....
T Consensus 1724 ~~---~~~~~~i~~~t~g~GvDvVld~~g~~~-l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 1798 (2512)
T 2vz8_A 1724 RD---TSFEQHVLRHTAGKGVDLVLNSLAEEK-LQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDS 1798 (2512)
T ss_dssp SS---SHHHHHHHHTTTSCCEEEEEECCCHHH-HHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGG
T ss_pred CC---HHHHHHHHHhcCCCCceEEEECCCchH-HHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHH
Confidence 77 7899999999988 9999999998554 99999999999 99999995432111222233455688999876543
Q ss_pred CC--chhhHHHHHHHH----HcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 334 LK--PRSDIATLAQKY----LDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 334 ~~--~~~~~~~~~~~~----~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
.. ..+.+.++++++ .++++. ++++++|+++++++|++.+.++... |+|+++++
T Consensus 1799 ~~~~~~~~~~~~l~~l~~~~~~g~l~--p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~~ 1858 (2512)
T 2vz8_A 1799 LFEEGGATWQEVSELLKAGIQEGVVQ--PLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVRE 1858 (2512)
T ss_dssp TTSSCCHHHHHHHHHHHHHHTTTCSC--CCCEEEEESSTHHHHHHHHHTTCCSSEEEEECSC
T ss_pred HhhhCHHHHHHHHHHHHHHHHcCCcC--CCcceEecHHHHHHHHHhhhccCccceEEEECCC
Confidence 21 123455555554 456554 4578999999999999999988775 99998864
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=6e-23 Score=180.09 Aligned_cols=184 Identities=21% Similarity=0.219 Sum_probs=140.2
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
+.++++|+++++++|+.+++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS 80 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 4688999999999999999999999999877789999999999996 9999999999999999 9999999999999999
Q ss_pred hcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcc
Q 016363 245 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 323 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 323 (390)
++|++.+++..+ .++.+.+.+.+.+ ++|++||++|... ++.++++++++ |+++.+|........+++...+.++
T Consensus 81 ~~g~~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (198)
T 1pqw_A 81 RLGVEYVGDSRS---VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKS 155 (198)
T ss_dssp TTCCSEEEETTC---STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTT
T ss_pred HcCCCEEeeCCc---HHHHHHHHHHhCCCCCeEEEECCchHH-HHHHHHHhccC-CEEEEEcCCCCcCcCcCChhHhcCC
Confidence 999988888766 6788888887766 8999999998755 89999999999 9999999754222222333334457
Q ss_pred eeEEeeec------CCCCchhhHHHHHHHHHcCCCCCc
Q 016363 324 RSVCGTYF------GGLKPRSDIATLAQKYLDKELNLG 355 (390)
Q Consensus 324 ~~i~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 355 (390)
+++.+... ......+.++++++++++|++++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~ 193 (198)
T 1pqw_A 156 ASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL 193 (198)
T ss_dssp CEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred cEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence 77776532 111114678899999999988765
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.12 E-value=6e-10 Score=100.18 Aligned_cols=166 Identities=14% Similarity=0.036 Sum_probs=110.5
Q ss_pred CCCCCEEeeec-------ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 93 VKERDLVLPIF-------HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 93 ~~vGd~V~~~~-------~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
+++||+|++.+ ...||.|.+|..|..+.|......+ |+..+
T Consensus 4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~~--------------------------G~~~~------ 51 (248)
T 2yvl_A 4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKPE--------------------------GVKIN------ 51 (248)
T ss_dssp CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCCT--------------------------TEEET------
T ss_pred CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCCC--------------------------CCEEE------
Confidence 89999999987 7789999999999988887543211 12212
Q ss_pred CceEEcCCCCCcchhh-----ccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 166 THVVKITPHIPLGIAC-----LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa-----~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
..+++.|+...+.+.+ .+..+.. +.. +....+++++++||.+|+| .|..++.+++. +. +|++++.+++..
T Consensus 52 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~ 126 (248)
T 2yvl_A 52 GFEVYRPTLEEIILLGFERKTQIIYPKD-SFY-IALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFY 126 (248)
T ss_dssp TEEEECCCHHHHHHHTSCCSSCCCCHHH-HHH-HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHH
T ss_pred EEEEeCCCHHHHHHhcCcCCCCcccchh-HHH-HHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHH
Confidence 2333333322222111 1111222 222 4477889999999999998 69999999988 66 999999999988
Q ss_pred HHHHh----cCC--cEEEcCCCCCCcCHHHHHHhhc-CC-CccEEEEcccCh-HHHHHHHHHhccCCceEEEEc
Q 016363 241 EIGKK----FGI--TDFINPATCGDKTVSQVIKEMT-DG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 241 ~~~~~----~g~--~~v~~~~~~~~~~~~~~i~~~~-~~-g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+++ .+. ...+... ++.+ .. .+ ++|+|+...+.. ..++.+.+.|+++ |+++...
T Consensus 127 ~~a~~~~~~~~~~~~~~~~~~-----d~~~----~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 190 (248)
T 2yvl_A 127 KTAQKNLKKFNLGKNVKFFNV-----DFKD----AEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLL 190 (248)
T ss_dssp HHHHHHHHHTTCCTTEEEECS-----CTTT----SCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEE
T ss_pred HHHHHHHHHcCCCCcEEEEEc-----Chhh----cccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEe
Confidence 87765 242 1112111 1111 12 23 899999888766 5688999999999 9988765
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.93 E-value=2.2e-11 Score=117.94 Aligned_cols=182 Identities=14% Similarity=0.120 Sum_probs=129.2
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccc
Q 016363 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 153 (390)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 153 (390)
..|++.++.|..+|++++++.+|+.++.-.... ++ .-...
T Consensus 76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~------------------------~~----------------~~~~~ 115 (404)
T 1gpj_A 76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKK------------------------AY----------------DRAAR 115 (404)
T ss_dssp EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH------------------------HH----------------HHHHH
T ss_pred ecCchHhhhheeeccCCCCCcCCcchhHHHHHH------------------------HH----------------HHHHH
Confidence 479999999999999999999999874311000 00 00011
Q ss_pred ccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHh---CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 016363 154 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA---GVEVGSTVAIFGLGAVGLAVAEGARLNRASKI 230 (390)
Q Consensus 154 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~---~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~V 230 (390)
.|++++|+..+...++.+|++++.+.++.. .+..++|.++.... +-.+|++|+|+|+|.+|.++++.++..|+++|
T Consensus 116 ~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V 194 (404)
T 1gpj_A 116 LGTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAV 194 (404)
T ss_dssp HTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEE
T ss_pred cCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEE
Confidence 246788888888889999998887776653 46778887763322 23589999999999999999999999998799
Q ss_pred EEecCChhhH-HHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHH--HHHHH--h--ccCCceEEE
Q 016363 231 IGVDINPEKF-EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMN--DAFNS--S--REGWGKTVI 303 (390)
Q Consensus 231 i~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~--~~~~~--l--~~~~G~~v~ 303 (390)
+++++++++. ++++++|++ +++. .++.+.+ .++|+|++|++....+. ..+.. + +++ +.++.
T Consensus 195 ~v~~r~~~ra~~la~~~g~~-~~~~-----~~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~ 262 (404)
T 1gpj_A 195 LVANRTYERAVELARDLGGE-AVRF-----DELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILI 262 (404)
T ss_dssp EEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEE
T ss_pred EEEeCCHHHHHHHHHHcCCc-eecH-----HhHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEE
Confidence 9999999886 677788875 3332 2343333 26999999998765331 44554 4 445 67777
Q ss_pred EcccC
Q 016363 304 LGVEM 308 (390)
Q Consensus 304 ~g~~~ 308 (390)
++...
T Consensus 263 vdia~ 267 (404)
T 1gpj_A 263 IDIAN 267 (404)
T ss_dssp EECCS
T ss_pred EEccC
Confidence 77543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.76 E-value=2e-08 Score=95.67 Aligned_cols=138 Identities=18% Similarity=0.137 Sum_probs=95.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE--EEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
+++|+|+|+|++|+++++.++.+|+ +|+++++++++.+.+++++... +++.+. .++.+.+. ++|+||+|
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~DvVI~~ 237 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA-----EADLLIGA 237 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH-----TCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH---HHHHHHHc-----CCCEEEEC
Confidence 4899999999999999999999999 9999999999999988766443 343322 23433332 69999999
Q ss_pred ccChHH------HHHHHHHhccCCceEEEEcccCCCC-----CcccchHhhh-cceeEEeeecCC--CC-------chhh
Q 016363 281 IGLTSV------MNDAFNSSREGWGKTVILGVEMHGS-----PISLNSIEIL-KGRSVCGTYFGG--LK-------PRSD 339 (390)
Q Consensus 281 ~g~~~~------~~~~~~~l~~~~G~~v~~g~~~~~~-----~~~~~~~~~~-~~~~i~g~~~~~--~~-------~~~~ 339 (390)
++.+.. ....++.++++ |.++.++...+.. ..+++...+. +++++.+...-. .. .+..
T Consensus 238 ~~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~ 316 (361)
T 1pjc_A 238 VLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNST 316 (361)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHH
T ss_pred CCcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHH
Confidence 987542 46678899998 9999998654221 1223332333 377777653111 00 1234
Q ss_pred HHHHHHHHHcC
Q 016363 340 IATLAQKYLDK 350 (390)
Q Consensus 340 ~~~~~~~~~~~ 350 (390)
++.+++++.+|
T Consensus 317 ~~~l~~l~~~G 327 (361)
T 1pjc_A 317 LPYVVKLANQG 327 (361)
T ss_dssp HHHHHHHHHHG
T ss_pred HHHHHHHHhCC
Confidence 56788888877
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=8.7e-08 Score=91.96 Aligned_cols=167 Identities=16% Similarity=0.196 Sum_probs=104.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCC----C--------Cc----CHHH
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATC----G--------DK----TVSQ 264 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~----~--------~~----~~~~ 264 (390)
++++|+|+|+|.+|++++++++.+|+ +|+++++++++.+.++++|++.+ ++..+. . +. ...+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 68999999999999999999999999 89999999999999988998654 222110 0 00 0112
Q ss_pred HHHhhcCCCccEEEEcc---cCh--HH-HHHHHHHhccCCceEEEEcccCCCC-CcccchHhhh-cceeEEeeecCCCCc
Q 016363 265 VIKEMTDGGADYCFECI---GLT--SV-MNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEIL-KGRSVCGTYFGGLKP 336 (390)
Q Consensus 265 ~i~~~~~~g~D~vid~~---g~~--~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~~i~g~~~~~~~~ 336 (390)
.+.+... ++|+||+|+ |.+ .. ....++.|+++ +.++.++...+.. ..+.+...+. +++++.|+... .
T Consensus 250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~---p 324 (384)
T 1l7d_A 250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV---P 324 (384)
T ss_dssp HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG---G
T ss_pred HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC---c
Confidence 2333333 699999999 432 21 26788999998 9999998643221 1111222233 37888886432 1
Q ss_pred hhhHHHHHHHHHcCCCCCccce-ee---eeccccHHHHHHHH
Q 016363 337 RSDIATLAQKYLDKELNLGEFI-TH---EVSFHDINKAFDLL 374 (390)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~i-~~---~~~l~~~~~A~~~~ 374 (390)
.....++.+++.++.+++-..+ .+ .+.+..-.+.++..
T Consensus 325 ~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 366 (384)
T 1l7d_A 325 SRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGT 366 (384)
T ss_dssp GGGHHHHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHHH
T ss_pred chhHHHHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhcC
Confidence 2334557777777655532222 11 34444445555543
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.1e-07 Score=88.81 Aligned_cols=140 Identities=19% Similarity=0.202 Sum_probs=88.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|.+...+..+ ..++.+.+. ++|+|++|
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~~~-----~~DvVi~~ 236 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT--EANIKKSVQ-----HADLLIGA 236 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC--HHHHHHHHH-----HCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC--HHHHHHHHh-----CCCEEEEC
Confidence 46899999999999999999999999 99999999999888766 77664333222 123333332 69999999
Q ss_pred ccChHH------HHHHHHHhccCCceEEEEcccCCCC-----CcccchHhhh-cceeEEeeecCCCC---------chhh
Q 016363 281 IGLTSV------MNDAFNSSREGWGKTVILGVEMHGS-----PISLNSIEIL-KGRSVCGTYFGGLK---------PRSD 339 (390)
Q Consensus 281 ~g~~~~------~~~~~~~l~~~~G~~v~~g~~~~~~-----~~~~~~~~~~-~~~~i~g~~~~~~~---------~~~~ 339 (390)
++.+.. .+..++.|+++ |.++.++...... ..+++...+. +++.+.+...-... .++.
T Consensus 237 ~g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~ 315 (369)
T 2eez_A 237 VLVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQT 315 (369)
T ss_dssp CC-------CCSCHHHHTTSCTT-CEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHH
T ss_pred CCCCccccchhHHHHHHHhhcCC-CEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHH
Confidence 996542 46788999988 9999998654321 1122222222 36776665311100 1244
Q ss_pred HHHHHHHHHcC
Q 016363 340 IATLAQKYLDK 350 (390)
Q Consensus 340 ~~~~~~~~~~~ 350 (390)
++.+++++.++
T Consensus 316 ~~~l~~l~~~g 326 (369)
T 2eez_A 316 LPYVLKLAEKG 326 (369)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhcC
Confidence 66777887776
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=3.3e-07 Score=87.60 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=76.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
+|++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|.+..++... ..++.+.+. ++|+|++|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~--~~~l~~~l~-----~aDvVi~~ 238 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS--AYELEGAVK-----RADLVIGA 238 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC--HHHHHHHHH-----HCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC--HHHHHHHHc-----CCCEEEEC
Confidence 58999999999999999999999999 99999999999888876 67653232211 023333332 58999999
Q ss_pred ccChHH------HHHHHHHhccCCceEEEEcccC
Q 016363 281 IGLTSV------MNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 281 ~g~~~~------~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
++.+.. ....++.|+++ +.++.++...
T Consensus 239 ~~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~ 271 (377)
T 2vhw_A 239 VLVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQ 271 (377)
T ss_dssp CCCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGT
T ss_pred CCcCCCCCcceecHHHHhcCCCC-cEEEEEecCC
Confidence 986653 46788999998 9999998543
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1.1e-06 Score=86.40 Aligned_cols=105 Identities=20% Similarity=0.247 Sum_probs=83.9
Q ss_pred hhhHHHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHH
Q 016363 187 VSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 265 (390)
Q Consensus 187 ~~tA~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 265 (390)
..++|+++.+..+ ..+|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+.+.++++|++ ++ ++.+.
T Consensus 257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~--------~l~e~ 326 (494)
T 3ce6_A 257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV--------TVEEA 326 (494)
T ss_dssp HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHHH
T ss_pred hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee--------cHHHH
Confidence 4556666533322 7899999999999999999999999999 999999999998888888985 22 23222
Q ss_pred HHhhcCCCccEEEEcccChHHHH-HHHHHhccCCceEEEEccc
Q 016363 266 IKEMTDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 266 i~~~~~~g~D~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 307 (390)
+ .++|+|+++++....+. ..++.|+++ |+++.+|..
T Consensus 327 l-----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~ 363 (494)
T 3ce6_A 327 I-----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHF 363 (494)
T ss_dssp G-----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSS
T ss_pred H-----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCC
Confidence 2 26999999999877555 788999998 999999854
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=2e-06 Score=82.79 Aligned_cols=125 Identities=18% Similarity=0.176 Sum_probs=83.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCC--C--------CcCH----HHHH
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATC--G--------DKTV----SQVI 266 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~--~--------~~~~----~~~i 266 (390)
++++|+|+|+|.+|+.++++++.+|+ +|+++++++++.+.++++|++.+. +..+. . ..++ .+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 58999999999999999999999999 999999999999999889886542 11000 0 0011 1123
Q ss_pred HhhcCCCccEEEEcccCh-----HH-HHHHHHHhccCCceEEEEcccCCCCCcccc--hH--hhhcceeEEeee
Q 016363 267 KEMTDGGADYCFECIGLT-----SV-MNDAFNSSREGWGKTVILGVEMHGSPISLN--SI--EILKGRSVCGTY 330 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~~--~~~~~~~i~g~~ 330 (390)
.+... ++|+||++++.+ .. ....++.|+++ +.++.++...+. .++.. .. ...+++++.|..
T Consensus 250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg-~v~~~~~~~p~~~~~gv~i~g~~ 320 (401)
T 1x13_A 250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGG-NCEYTVPGEIFTTENGVKVIGYT 320 (401)
T ss_dssp HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTSEEECTTSCEEECCS
T ss_pred HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCC-CcCcccCCCceEEECCEEEEeeC
Confidence 33322 699999995332 21 25788999998 999999964222 12221 11 223488888864
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.2e-06 Score=69.19 Aligned_cols=107 Identities=15% Similarity=0.111 Sum_probs=76.6
Q ss_pred chhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHH-HHhcCCcEEEcCCCCCCcCHHH
Q 016363 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQ 264 (390)
Q Consensus 186 ~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~ 264 (390)
++++++.++ +.+....+++|+|+|+|.+|.+.++.++..|+ +|++.++++++.+. .++++.+.. .. .++.+
T Consensus 5 ~~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~~-~~-----~~~~~ 76 (144)
T 3oj0_A 5 KVSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEYV-LI-----NDIDS 76 (144)
T ss_dssp CCSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEEE-EC-----SCHHH
T ss_pred cccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCceE-ee-----cCHHH
Confidence 455667665 44444459999999999999999999888999 69999999988765 456775332 22 23444
Q ss_pred HHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 265 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 265 ~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.+. ++|+|+.+++...... ....++++ +.++.++.+
T Consensus 77 ~~~-----~~Divi~at~~~~~~~-~~~~l~~g-~~vid~~~p 112 (144)
T 3oj0_A 77 LIK-----NNDVIITATSSKTPIV-EERSLMPG-KLFIDLGNP 112 (144)
T ss_dssp HHH-----TCSEEEECSCCSSCSB-CGGGCCTT-CEEEECCSS
T ss_pred Hhc-----CCCEEEEeCCCCCcEe-eHHHcCCC-CEEEEccCC
Confidence 443 5899999999765222 22677777 888888753
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=2e-05 Score=65.18 Aligned_cols=93 Identities=20% Similarity=0.158 Sum_probs=66.4
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
....++++|+|+|+|.+|...++.++..|. +|+++++++++.+.++ ..|...+. .+. .+ .+.+.+....++|+
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d~---~~-~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GDA---AE-FETLKECGMEKADM 87 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SCT---TS-HHHHHTTTGGGCSE
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ecC---CC-HHHHHHcCcccCCE
Confidence 345678999999999999999999999999 9999999999988777 66765433 221 12 23343321237999
Q ss_pred EEEcccChHHHHHHHHHhcc
Q 016363 277 CFECIGLTSVMNDAFNSSRE 296 (390)
Q Consensus 277 vid~~g~~~~~~~~~~~l~~ 296 (390)
||.+++.......+...++.
T Consensus 88 Vi~~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 88 VFAFTNDDSTNFFISMNARY 107 (155)
T ss_dssp EEECSSCHHHHHHHHHHHHH
T ss_pred EEEEeCCcHHHHHHHHHHHH
Confidence 99999987755555555554
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.3e-05 Score=76.49 Aligned_cols=125 Identities=19% Similarity=0.215 Sum_probs=82.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC-C---C-CCCcCHH------------H
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP-A---T-CGDKTVS------------Q 264 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~-~---~-~~~~~~~------------~ 264 (390)
++.+|+|+|+|.+|+.++++++.+|+ +|++.++++++.+.++++|++.+... . + .....+. +
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 57899999999999999999999999 99999999999999999987532210 0 0 0000011 1
Q ss_pred HHHhhcCCCccEEEEcccChH------HHHHHHHHhccCCceEEEEcccCCCCCcccc-h-Hhhhc-ceeEEeee
Q 016363 265 VIKEMTDGGADYCFECIGLTS------VMNDAFNSSREGWGKTVILGVEMHGSPISLN-S-IEILK-GRSVCGTY 330 (390)
Q Consensus 265 ~i~~~~~~g~D~vid~~g~~~------~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~~~-~~~i~g~~ 330 (390)
.+.+... ++|+||.|+..+. ..+..++.|+++ ..++.++...+.. +... + ..+.. ++++++..
T Consensus 268 ~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG~-~e~t~~~~~~~~~GV~~~gv~ 339 (405)
T 4dio_A 268 LVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGGN-IEGAEAGKVTEVGGVRIVGHL 339 (405)
T ss_dssp HHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTCS-BTTCCTTEEEEETTEEEEECS
T ss_pred HHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCCC-ccccCCCCeEEECCEEEEEeC
Confidence 2222221 7999999964221 246889999998 9999998643321 2111 1 11223 77777764
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=98.02 E-value=2e-05 Score=71.79 Aligned_cols=102 Identities=17% Similarity=0.268 Sum_probs=72.8
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCC-cEE-EcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGI-TDF-INPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~-~~v-~~~~~~~~~~~~~~i 266 (390)
+.....+.++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++ .+. +.+ +.. .++.+.
T Consensus 104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~-----~d~~~~- 176 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV-----RDISEG- 176 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC-----CCGGGC-
T ss_pred HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE-----CCHHHc-
Confidence 44677899999999999977 888888998864 3399999999998877754 343 211 211 122221
Q ss_pred HhhcCCCccEEEEcccCh-HHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 305 (390)
+..+.+|+|+...+.. ..+..+.+.|+++ |+++...
T Consensus 177 --~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~ 213 (277)
T 1o54_A 177 --FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC 213 (277)
T ss_dssp --CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred --ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEe
Confidence 2223799999776655 4578899999998 9988764
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.01 E-value=1e-05 Score=76.53 Aligned_cols=105 Identities=21% Similarity=0.221 Sum_probs=75.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC-CCCCCcCH------------HHHHHh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP-ATCGDKTV------------SQVIKE 268 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~-~~~~~~~~------------~~~i~~ 268 (390)
++.+|+|+|+|.+|+.+++.++.+|+ +|++.++++++.+.++++|++.+... +..+...+ .+.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 67899999999999999999999999 99999999999999999987543100 00000001 112222
Q ss_pred hcCCCccEEEEcccChH------HHHHHHHHhccCCceEEEEcccCC
Q 016363 269 MTDGGADYCFECIGLTS------VMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~------~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
.. .++|+||.++..+. ..+..++.|+++ ..++.++...+
T Consensus 262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~G 306 (381)
T 3p2y_A 262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETG 306 (381)
T ss_dssp HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGT
T ss_pred HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCC
Confidence 22 27999999873321 237889999998 99999986543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=97.96 E-value=8.2e-05 Score=57.88 Aligned_cols=94 Identities=12% Similarity=0.132 Sum_probs=65.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+.+|+|+|+|.+|..+++.+...| . +|+++++++++.+.+...+...+. +..+ .+.+.+... ++|+||+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~~-~~d~vi~ 75 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRMGVATKQVDAKD------EAGLAKALG-GFDAVIS 75 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTTTCEEEECCTTC------HHHHHHHTT-TCSEEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhCCCcEEEecCCC------HHHHHHHHc-CCCEEEE
Confidence 3568999999999999999999999 6 999999999998888766655433 2221 234444433 7999999
Q ss_pred cccChHHHHHHHHHhccCCceEEEE
Q 016363 280 CIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+++..........++..+ -.++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~g-~~~~~~ 99 (118)
T 3ic5_A 76 AAPFFLTPIIAKAAKAAG-AHYFDL 99 (118)
T ss_dssp CSCGGGHHHHHHHHHHTT-CEEECC
T ss_pred CCCchhhHHHHHHHHHhC-CCEEEe
Confidence 998766333344444444 444433
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.7e-05 Score=71.76 Aligned_cols=93 Identities=14% Similarity=0.162 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.++.+||.+|+|. |..+..+++.. +. +|++++.+++..+.+++.+.. .++..+. .++ .+..+.+|+|+
T Consensus 84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~-----~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTCEEEEE
T ss_pred CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch---hhC-----CCCCCceeEEE
Confidence 6889999999987 98899999886 66 999999999999998876543 2222221 111 12234799999
Q ss_pred EcccChHHHHHHHHHhccCCceEEEEc
Q 016363 279 ECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.... ...+..+.+.|+++ |+++...
T Consensus 154 ~~~~-~~~l~~~~~~L~pg-G~l~~~~ 178 (269)
T 1p91_A 154 RIYA-PCKAEELARVVKPG-GWVITAT 178 (269)
T ss_dssp EESC-CCCHHHHHHHEEEE-EEEEEEE
T ss_pred EeCC-hhhHHHHHHhcCCC-cEEEEEE
Confidence 6444 44489999999999 9988765
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=8.6e-05 Score=71.01 Aligned_cols=101 Identities=16% Similarity=0.228 Sum_probs=77.8
Q ss_pred HHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 191 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|... .++.+.+
T Consensus 207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v---------~~Leeal--- 273 (435)
T 3gvp_A 207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL---------VKLNEVI--- 273 (435)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---------CCHHHHT---
T ss_pred HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe---------ccHHHHH---
Confidence 444544444 4589999999999999999999999999 9999999988776666666421 1343333
Q ss_pred cCCCccEEEEcccChHHHH-HHHHHhccCCceEEEEccc
Q 016363 270 TDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 307 (390)
...|+|+.|.|+...+. ..+..|+++ +.++.+|..
T Consensus 274 --~~ADIVi~atgt~~lI~~e~l~~MK~g-ailINvgrg 309 (435)
T 3gvp_A 274 --RQVDIVITCTGNKNVVTREHLDRMKNS-CIVCNMGHS 309 (435)
T ss_dssp --TTCSEEEECSSCSCSBCHHHHHHSCTT-EEEEECSST
T ss_pred --hcCCEEEECCCCcccCCHHHHHhcCCC-cEEEEecCC
Confidence 26899999988766554 789999998 999998854
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=5.2e-05 Score=69.31 Aligned_cols=98 Identities=13% Similarity=0.162 Sum_probs=73.5
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i~~~ 269 (390)
..++++++++||.+|+|+.+..++.+++..|+ +|++++.+++..+.+++ .|.+. ++.. +..+ +
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~g------Da~~----l 184 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITG------DETV----I 184 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEES------CGGG----G
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEC------chhh----C
Confidence 45789999999999999888888888888898 99999999998888765 35432 2221 2211 2
Q ss_pred cCCCccEEEEcccCh---HHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
.++.||+|+.....+ ..+..+.+.|+++ |+++...
T Consensus 185 ~d~~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~ 222 (298)
T 3fpf_A 185 DGLEFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRT 222 (298)
T ss_dssp GGCCCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEE
T ss_pred CCCCcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEc
Confidence 234899999655543 3578899999999 9998765
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.82 E-value=3.1e-05 Score=72.61 Aligned_cols=104 Identities=14% Similarity=0.167 Sum_probs=68.0
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhc----C------------Cc-EEEcCC
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF----G------------IT-DFINPA 255 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~----g------------~~-~v~~~~ 255 (390)
+.....+.+|++||-+|+|. |..++.+++..|. .+|++++.++...+.+++. + .. .++..+
T Consensus 97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d 175 (336)
T 2b25_A 97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD 175 (336)
T ss_dssp HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence 34667899999999999976 7888888887763 4999999999887777542 1 11 222211
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChH-HHHHHHHHhccCCceEEEEc
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTS-VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~-~~~~~~~~l~~~~G~~v~~g 305 (390)
- .+. +..+..+.+|+|+-....+. .+..+.+.|+++ |+++...
T Consensus 176 ~---~~~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~ 219 (336)
T 2b25_A 176 I---SGA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV 219 (336)
T ss_dssp T---TCC---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred h---HHc---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence 1 111 11122236999986555443 478899999999 9998664
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00025 Score=60.09 Aligned_cols=96 Identities=17% Similarity=0.242 Sum_probs=68.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC-CCccEEEEc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD-GGADYCFEC 280 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~-~g~D~vid~ 280 (390)
+++|+|+|+|.+|...++.++.. |. +|+++++++++.+.+++.|...+..... + .+.+.+.++ .++|+||.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~----~-~~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDAT----D-PDFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTT----C-HHHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCC----C-HHHHHhccCCCCCCEEEEe
Confidence 67899999999999999999998 99 8999999999999998888765542111 1 233444412 389999999
Q ss_pred ccChHHHHHHHHHhccCC--ceEEEE
Q 016363 281 IGLTSVMNDAFNSSREGW--GKTVIL 304 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~--G~~v~~ 304 (390)
++.......+...++..+ ..++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 113 MPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 998764444444444431 455543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00013 Score=67.08 Aligned_cols=93 Identities=20% Similarity=0.244 Sum_probs=72.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
-.|++|+|+|+|.+|.++++.++..|+ +|++.++++++.+.+.++|+.. ++. .++.+.+ ..+|+|+.+
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~-----~~l~~~l-----~~aDvVi~~ 220 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI-----SKAAQEL-----RDVDVCINT 220 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG-----GGHHHHT-----TTCSEEEEC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh-----hhHHHHh-----cCCCEEEEC
Confidence 478999999999999999999999999 9999999998877777788653 221 1232222 269999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
++....-...+..++++ +.++.++.
T Consensus 221 ~p~~~i~~~~l~~mk~~-~~lin~ar 245 (293)
T 3d4o_A 221 IPALVVTANVLAEMPSH-TFVIDLAS 245 (293)
T ss_dssp CSSCCBCHHHHHHSCTT-CEEEECSS
T ss_pred CChHHhCHHHHHhcCCC-CEEEEecC
Confidence 98644234677889988 89998884
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0006 Score=55.12 Aligned_cols=96 Identities=9% Similarity=0.118 Sum_probs=68.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
-.++|+|+|+|.+|...++.++..|. +|+++++++++.+.+++.|...+.... .-.+.+.+..-.++|+++-++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~-----~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNA-----ANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCT-----TSHHHHHHTTGGGCSEEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCC-----CCHHHHHhcCcccCCEEEEEC
Confidence 35789999999999999999999999 999999999999999888876554221 223344443223799999999
Q ss_pred cChHHHH---HHHHHhccCCceEEEE
Q 016363 282 GLTSVMN---DAFNSSREGWGKTVIL 304 (390)
Q Consensus 282 g~~~~~~---~~~~~l~~~~G~~v~~ 304 (390)
+...... ...+.+.+. .+++..
T Consensus 80 ~~~~~n~~~~~~a~~~~~~-~~iiar 104 (140)
T 3fwz_A 80 PNGYEAGEIVASARAKNPD-IEIIAR 104 (140)
T ss_dssp SCHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred CChHHHHHHHHHHHHHCCC-CeEEEE
Confidence 9866322 233444445 555543
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00038 Score=62.14 Aligned_cols=104 Identities=12% Similarity=0.030 Sum_probs=69.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccEEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~vid 279 (390)
++|||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+-+.+.. +..+-.+..++.+.+.+... +++|++++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 68999998 9999999999999999 99999999988877765444332 22111111223333333222 37999999
Q ss_pred cccChH-------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 280 CIGLTS-------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 280 ~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+.|... ..+.+...|.+.+|+++.++...
T Consensus 82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~ 135 (247)
T 3ged_A 82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTR 135 (247)
T ss_dssp CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecc
Confidence 987422 13445556655449999988543
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00018 Score=66.27 Aligned_cols=94 Identities=17% Similarity=0.204 Sum_probs=72.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
-.|.+|+|+|+|.+|..+++.++..|+ +|++.++++++.+.+.++|.. +++. .++.+ +. ..+|+|+.+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~-----~~l~~----~l-~~aDvVi~~ 222 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT-----DELKE----HV-KDIDICINT 222 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG-----GGHHH----HS-TTCSEEEEC
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch-----hhHHH----Hh-hCCCEEEEC
Confidence 468999999999999999999999999 999999999888777777764 2222 12322 22 269999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEccc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++....-...++.++++ +.++.++..
T Consensus 223 ~p~~~i~~~~~~~mk~g-~~lin~a~g 248 (300)
T 2rir_A 223 IPSMILNQTVLSSMTPK-TLILDLASR 248 (300)
T ss_dssp CSSCCBCHHHHTTSCTT-CEEEECSST
T ss_pred CChhhhCHHHHHhCCCC-CEEEEEeCC
Confidence 98754234577888888 899999853
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00037 Score=63.17 Aligned_cols=102 Identities=17% Similarity=0.194 Sum_probs=71.8
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHhc-----C--Cc--EEEcCCCCCCcCHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF-----G--IT--DFINPATCGDKTVS 263 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~~-----g--~~--~v~~~~~~~~~~~~ 263 (390)
+.....++++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++. | .+ .++. . ++.
T Consensus 91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~-~-----d~~ 163 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV-S-----DLA 163 (280)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC-S-----CGG
T ss_pred HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEE-C-----chH
Confidence 4466789999999999998 7888888988753 23999999999988777542 4 22 2222 1 221
Q ss_pred HHHHhhcCCCccEEEEcccCh-HHHHHHHHHhccCCceEEEEc
Q 016363 264 QVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 264 ~~i~~~~~~g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 305 (390)
+. .+..+.+|+|+...... ..+..+.+.|+++ |+++...
T Consensus 164 ~~--~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~ 203 (280)
T 1i9g_A 164 DS--ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV 203 (280)
T ss_dssp GC--CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred hc--CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEe
Confidence 11 11123799999766554 4578899999998 9988765
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00019 Score=65.07 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=72.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++|.... +..+-.+..++.+.+.+... |++|
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999998 9999999999999999 999999999987655 55665432 21111112223333333322 3799
Q ss_pred EEEEcccChH-------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 276 YCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 276 ~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+++++.|... ..+.++..|+++ |+|+.++..
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~ 161 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGST 161 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCG
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeeh
Confidence 9999988522 245566788887 999988754
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00035 Score=62.46 Aligned_cols=102 Identities=17% Similarity=0.216 Sum_probs=72.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i 266 (390)
+.....++++++||-+|+|. |..+..+++.++ ..+|++++.+++..+.+++ .|... .+... ++.+.
T Consensus 85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~- 157 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-----DIYEG- 157 (255)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-----CGGGC-
T ss_pred HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-----chhhc-
Confidence 44677899999999999976 888888888853 3399999999998877754 34321 22111 22211
Q ss_pred HhhcCCCccEEEEcccChH-HHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIGLTS-VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~~-~~~~~~~~l~~~~G~~v~~g 305 (390)
+..+.+|+|+...+... .++.+.+.|+++ |+++.+.
T Consensus 158 --~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 194 (255)
T 3mb5_A 158 --IEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT 194 (255)
T ss_dssp --CCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred --cCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence 22237999997776653 588999999999 9998764
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00028 Score=67.61 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=76.3
Q ss_pred HHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 191 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|... + ++.+.+.
T Consensus 234 vdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v--------~LeElL~-- 301 (464)
T 3n58_A 234 VDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-V--------TLDDAAS-- 301 (464)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C--------CHHHHGG--
T ss_pred HHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-c--------cHHHHHh--
Confidence 334434333 4689999999999999999999999999 9999999887766665566532 1 2333332
Q ss_pred cCCCccEEEEcccChHHH-HHHHHHhccCCceEEEEccc
Q 016363 270 TDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 307 (390)
..|+|+.+.|+...+ ...+..|+++ +.++.+|-.
T Consensus 302 ---~ADIVv~atgt~~lI~~e~l~~MK~G-AILINvGRg 336 (464)
T 3n58_A 302 ---TADIVVTTTGNKDVITIDHMRKMKDM-CIVGNIGHF 336 (464)
T ss_dssp ---GCSEEEECCSSSSSBCHHHHHHSCTT-EEEEECSSS
T ss_pred ---hCCEEEECCCCccccCHHHHhcCCCC-eEEEEcCCC
Confidence 589999999877644 5788999998 899988843
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00029 Score=68.54 Aligned_cols=101 Identities=18% Similarity=0.249 Sum_probs=75.9
Q ss_pred HHHHHHHhCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 191 VGAAWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 191 ~~~l~~~~~~-~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.++.+..+. -.|++++|+|+|.+|.++++.++..|+ +|+++++++.+...+...+.+ +.+ ..+.
T Consensus 252 ~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~--------lee~---- 317 (488)
T 3ond_A 252 PDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLT--------LEDV---- 317 (488)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC--------GGGT----
T ss_pred HHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCC--------HHHH----
Confidence 3344444554 479999999999999999999999999 999999999888777776653 211 1111
Q ss_pred cCCCccEEEEcccChHHH-HHHHHHhccCCceEEEEccc
Q 016363 270 TDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 307 (390)
...+|+++++.|....+ ...+..++++ +.++..|..
T Consensus 318 -~~~aDvVi~atG~~~vl~~e~l~~mk~g-aiVvNaG~~ 354 (488)
T 3ond_A 318 -VSEADIFVTTTGNKDIIMLDHMKKMKNN-AIVCNIGHF 354 (488)
T ss_dssp -TTTCSEEEECSSCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred -HHhcCEEEeCCCChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence 12699999999976645 3488889988 888888854
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00074 Score=54.47 Aligned_cols=77 Identities=17% Similarity=0.184 Sum_probs=59.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
..+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.+...+.. +. .-.+.+.+..-.++|+||.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~g-d~----~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVIA-DP----TDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEEC-CT----TCHHHHHHSCCTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEEC-CC----CCHHHHHhCCcccCCEEEEecC
Confidence 4689999999999999999999999 9999999999999888877654432 21 2233444443338999999999
Q ss_pred ChH
Q 016363 283 LTS 285 (390)
Q Consensus 283 ~~~ 285 (390)
...
T Consensus 80 ~~~ 82 (141)
T 3llv_A 80 DDE 82 (141)
T ss_dssp CHH
T ss_pred CHH
Confidence 755
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00014 Score=65.01 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=72.7
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHhc-----CCcEEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF-----GITDFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~~-----g~~~v~~~~~~~~~~~~~~i~ 267 (390)
+.....++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++. |.+.+-... .++.+.
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~----~d~~~~-- 160 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHL----GKLEEA-- 160 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE----SCGGGC--
T ss_pred HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE----Cchhhc--
Confidence 44667899999999999985 888889998864 23999999999988877653 532221111 122111
Q ss_pred hhcCCCccEEEEcccCh-HHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+..+.+|+|+...+.. ..+..+.+.|+++ |+++.+.
T Consensus 161 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 198 (258)
T 2pwy_A 161 ELEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYL 198 (258)
T ss_dssp CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred CCCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEe
Confidence 11223799999766654 5578899999998 9988765
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0002 Score=63.72 Aligned_cols=105 Identities=11% Similarity=0.135 Sum_probs=69.2
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
++-.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+....-.... ..|-.+ ..++.+.+.+ . +++|+
T Consensus 7 dlf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~-~-g~iDi 81 (242)
T 4b79_A 7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD--SQRLQRLFEA-L-PRLDV 81 (242)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC--HHHHHHHHHH-C-SCCSE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC--HHHHHHHHHh-c-CCCCE
Confidence 3457999999998 9999999999999999 9999999887765332211111 122222 1223333322 2 47999
Q ss_pred EEEcccChH-----------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 277 CFECIGLTS-----------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 277 vid~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
.+++.|... ..+.++..|+..+|+||.++...
T Consensus 82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~ 136 (242)
T 4b79_A 82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY 136 (242)
T ss_dssp EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence 999988521 23455567765449999998543
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00046 Score=55.51 Aligned_cols=77 Identities=19% Similarity=0.313 Sum_probs=55.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
++++|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.+...+. .+. .+ .+.+.+..-+++|+|+.++
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-~d~---~~-~~~l~~~~~~~~d~vi~~~ 78 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANA---TE-ENELLSLGIRNFEYVIVAI 78 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEE-CCT---TC-HHHHHTTTGGGCSEEEECC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEE-eCC---CC-HHHHHhcCCCCCCEEEECC
Confidence 35679999999999999999999998 899999998887777666654332 221 12 2344433223799999999
Q ss_pred cCh
Q 016363 282 GLT 284 (390)
Q Consensus 282 g~~ 284 (390)
+..
T Consensus 79 ~~~ 81 (144)
T 2hmt_A 79 GAN 81 (144)
T ss_dssp CSC
T ss_pred CCc
Confidence 975
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00069 Score=60.93 Aligned_cols=103 Identities=12% Similarity=0.095 Sum_probs=68.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH---HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG---KKFGITD-FI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~---~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ .+.+... .+ |-.+ +.+..+.+.+... |
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD--DAQCRDAVAQTIATFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 5889999998 9999999999999999 999999887765443 3344332 22 2222 2233333333322 3
Q ss_pred CccEEEEcccChH------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 273 GADYCFECIGLTS------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 273 g~D~vid~~g~~~------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++|+++++.|... ..+.++..|+..+|+||.++..
T Consensus 83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~ 141 (258)
T 4gkb_A 83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK 141 (258)
T ss_dssp CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence 7999999998521 2344556666544999999853
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0014 Score=58.69 Aligned_cols=106 Identities=19% Similarity=0.206 Sum_probs=70.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEEcCCCCC-CcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCG-DKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~~~~~~~-~~~~~~~i~~~~~--~g 273 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+.....-|.. +.+..+.+.+... |+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 5889999998 9999999999999999 999999998876544 334544333221111 2233333333332 37
Q ss_pred ccEEEEcccChH-------------------------HHHHHHHHhc--cCCceEEEEcccC
Q 016363 274 ADYCFECIGLTS-------------------------VMNDAFNSSR--EGWGKTVILGVEM 308 (390)
Q Consensus 274 ~D~vid~~g~~~-------------------------~~~~~~~~l~--~~~G~~v~~g~~~ 308 (390)
+|+++++.|... ..+.+++.|. ..+|+|+.++...
T Consensus 87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~ 148 (255)
T 4g81_D 87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT 148 (255)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence 999999998522 2344556662 2339999998543
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0012 Score=63.34 Aligned_cols=99 Identities=19% Similarity=0.282 Sum_probs=74.5
Q ss_pred HHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 191 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.++.+..+ .-.|.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|... .++.+.+.
T Consensus 198 ldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~---------~sL~eal~-- 265 (436)
T 3h9u_A 198 VDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQV---------LLVEDVVE-- 265 (436)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---------CCHHHHTT--
T ss_pred HHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCee---------cCHHHHHh--
Confidence 334434334 3479999999999999999999999999 9999999988877776666532 13433332
Q ss_pred cCCCccEEEEcccChHHHH-HHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g 305 (390)
..|+|+.+.++...+. ..+..|+++ ..++.+|
T Consensus 266 ---~ADVVilt~gt~~iI~~e~l~~MK~g-AIVINvg 298 (436)
T 3h9u_A 266 ---EAHIFVTTTGNDDIITSEHFPRMRDD-AIVCNIG 298 (436)
T ss_dssp ---TCSEEEECSSCSCSBCTTTGGGCCTT-EEEEECS
T ss_pred ---hCCEEEECCCCcCccCHHHHhhcCCC-cEEEEeC
Confidence 5899999888755343 678889988 8888887
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0016 Score=57.86 Aligned_cols=81 Identities=19% Similarity=0.089 Sum_probs=55.2
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
...++++|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++.....+..-+ -.-.+.+.++.. +++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCN---LANKEECSNLISKTSNL 85 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECC---TTSHHHHHHHHHTCSCC
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcC---CCCHHHHHHHHHhcCCC
Confidence 3457899999998 9999999999999999 9999999998877664 344332222222 111222333222 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 86 d~li~~Ag~ 94 (249)
T 3f9i_A 86 DILVCNAGI 94 (249)
T ss_dssp SEEEECCC-
T ss_pred CEEEECCCC
Confidence 999999884
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00089 Score=58.99 Aligned_cols=99 Identities=11% Similarity=0.075 Sum_probs=67.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...++..+- .+.+.+.. +++|+||++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl------~~~~~~~~-~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANL------EEDFSHAF-ASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCT------TSCCGGGG-TTCSEEEEC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEccc------HHHHHHHH-cCCCEEEEC
Confidence 4789999998 9999999999999999 9999999999988887766622332221 12222222 279999999
Q ss_pred ccChH-------------HHHHHHHHhccC-CceEEEEcccC
Q 016363 281 IGLTS-------------VMNDAFNSSREG-WGKTVILGVEM 308 (390)
Q Consensus 281 ~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~~ 308 (390)
.|... ....+++.++.. .++++.++...
T Consensus 92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 133 (236)
T 3e8x_A 92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG 133 (236)
T ss_dssp CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence 98531 122334444332 26888887643
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00059 Score=61.17 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=68.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-FINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
-.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +++... .+..+-.+..++.+.+.+... +++|
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 35789999998 9999999999999999 9999999998876654 344332 222111011222222222211 3799
Q ss_pred EEEEcccChH-------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 276 YCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 276 ~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+++++.|... ..+.++..+++. |+|+.++...
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~ 141 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSVA 141 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCGG
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECChh
Confidence 9999987421 123344555666 8999988543
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0016 Score=58.26 Aligned_cols=106 Identities=15% Similarity=0.199 Sum_probs=69.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEE-cCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFI-NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~-~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+... ..+-.+..++.+.+.+... |+
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5889999998 9999999999999999 999999999886544 345654332 1111112233333333222 37
Q ss_pred ccEEEEcccChH--------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 274 ADYCFECIGLTS--------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 274 ~D~vid~~g~~~--------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
+|+++++.|... ..+.+++.|.+ ++|+||.++...
T Consensus 85 iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~ 146 (254)
T 4fn4_A 85 IDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIA 146 (254)
T ss_dssp CCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechh
Confidence 999999988311 23455565543 339999998543
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0009 Score=60.67 Aligned_cols=79 Identities=20% Similarity=0.304 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCC--c-EEE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI--T-DFI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~--~-~v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+. . .++ |-.+ ..++.+.+.+...
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIRS 107 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4689999998 9999999999988999 9999999987765442 2332 1 122 2222 1223333332222
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 108 ~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 108 QHSGVDICINNAGL 121 (279)
T ss_dssp HHCCCSEEEECCCC
T ss_pred hCCCCCEEEECCCC
Confidence 379999999883
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0015 Score=57.64 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=65.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ ++... .+..+-.+..++.+.+.+... +++|++
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 81 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV 81 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence 578999998 9999999999889999 99999999988766543 33221 221111011223333333222 379999
Q ss_pred EEcccChH-------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 278 FECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 278 id~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+++.|... ..+.++..++..+|+++.++..
T Consensus 82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~ 136 (235)
T 3l6e_A 82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSS 136 (235)
T ss_dssp EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCE
T ss_pred EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCH
Confidence 99988521 1244455565543788888753
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0014 Score=58.50 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=66.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... .+..+-.+..++.+.+.+... +++|+
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4678999998 9999999999988999 999999998876655 3344332 222111011223333333221 36999
Q ss_pred EEEcccChH-------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 277 CFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 277 vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+|++.|... ..+.++..++..+|+++.++..
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~ 139 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV 139 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcch
Confidence 999988421 1234445555433899988854
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0017 Score=58.29 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCC-c-EEEcCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-T-DFINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~-~-~v~~~~~~~~~~~~~~i~~~~~- 271 (390)
.|+++||+|+ | ++|.+.++.+...|+ +|+.+++++++.+.+. +++. . ..+.-+-.++.+..+.+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD 83 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5889999997 5 899999999999999 9999999987765553 3442 2 2222111112233333333222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 84 ~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 84 VGNIDGVYHSIAF 96 (256)
T ss_dssp HCCCSEEEECCCC
T ss_pred hCCCCEEEecccc
Confidence 379999998874
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0025 Score=57.20 Aligned_cols=105 Identities=15% Similarity=0.197 Sum_probs=65.8
Q ss_pred CCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC-c-EEEcCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GA--VGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-T-DFINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~--vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~-~-~v~~~~~~~~~~~~~~i~~~~~- 271 (390)
.+.++||+|+ |. +|.+.++.+...|+ +|++++++++..+.+.+ ++. . .++..+-.+..++.+.+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 4789999987 66 99999998888999 99999988765444433 332 1 2222221112333333433322
Q ss_pred -CCccEEEEcccChH-----------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 272 -GGADYCFECIGLTS-----------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 272 -~g~D~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+++|+++++.|... ..+.++..+++. |+|+.++...
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 150 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEG-GSIVTLTYLG 150 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTC-EEEEEEECGG
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCC-ceEEEEeccc
Confidence 37999999887421 123344556666 9999988543
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0016 Score=56.16 Aligned_cols=99 Identities=13% Similarity=0.150 Sum_probs=70.2
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHH
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~ 267 (390)
.....++++++||-+|+|. |..++.+++. +. +|++++.+++..+.+++ .|.. .++..+ ..+.+.
T Consensus 48 l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d------~~~~~~ 118 (204)
T 3njr_A 48 LAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGT------APAALA 118 (204)
T ss_dssp HHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC------TTGGGT
T ss_pred HHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCc------hhhhcc
Confidence 4667889999999999975 8888888887 77 99999999998877754 4543 223222 111111
Q ss_pred hhcCCCccEEEEcccChH-HHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECIGLTS-VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~~~-~~~~~~~~l~~~~G~~v~~g 305 (390)
. .+.+|+|+...+... .++.+.+.|+++ |+++...
T Consensus 119 ~--~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~ 154 (204)
T 3njr_A 119 D--LPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANA 154 (204)
T ss_dssp T--SCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEE
T ss_pred c--CCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEe
Confidence 1 127999996554333 578889999999 9998665
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0029 Score=56.89 Aligned_cols=79 Identities=18% Similarity=0.211 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+ |-.+ ..++.+.+.+... +++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHHcCCC
Confidence 4689999998 9999999999999999 9999999988876554 34322 222 2222 1223333333222 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 82 D~lvnnAg~ 90 (263)
T 2a4k_A 82 HGVAHFAGV 90 (263)
T ss_dssp CEEEEGGGG
T ss_pred cEEEECCCC
Confidence 999999874
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0042 Score=53.93 Aligned_cols=99 Identities=8% Similarity=0.036 Sum_probs=64.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEecCChh-hHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGAR-LNRASKIIGVDINPE-KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~-~~g~~~Vi~~~~~~~-~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+|||+|+ |.+|.+.++.+. ..|+ +|++++++++ +.+.+...+.. .++..+- .+ .+.+.+... ++|++|+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~d-~~~~~~~~~-~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSF---QN-PGXLEQAVT-NAEVVFV 79 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCT---TC-HHHHHHHHT-TCSEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCC---CC-HHHHHHHHc-CCCEEEE
Confidence 46999998 999999998887 8999 9999999988 76665322222 2222211 11 223333332 7999999
Q ss_pred cccChH-HHHHHHHHhccCC-ceEEEEcccC
Q 016363 280 CIGLTS-VMNDAFNSSREGW-GKTVILGVEM 308 (390)
Q Consensus 280 ~~g~~~-~~~~~~~~l~~~~-G~~v~~g~~~ 308 (390)
+.|... ....+++.++..+ ++++.++...
T Consensus 80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 80 GAMESGSDMASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred cCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence 998632 1345555555432 5888887543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0031 Score=55.32 Aligned_cols=100 Identities=12% Similarity=0.075 Sum_probs=63.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcE-EE--cCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FI--NPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~-v~--~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ ++... .+ |-.+ .+-.+.+.+...+.+|+++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLAS---HQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTC---HHHHHHHHHSCSSCCSEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCC---HHHHHHHHHHHhhcCCEEE
Confidence 36899998 9999999999999999 89999999988776654 43221 12 2222 2222222222233469999
Q ss_pred EcccChH-------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 279 ECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 279 d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++.|... ..+.++..+.+.+++++.++..
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~ 131 (230)
T 3guy_A 78 HSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMST 131 (230)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCG
T ss_pred EeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeec
Confidence 9988421 1234455565543688888754
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0023 Score=57.26 Aligned_cols=81 Identities=21% Similarity=0.259 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMT--DGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ .+++... .+..+-.+..++.+.+.+.. -+++|+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 9999999999989999 999999998876655 3455432 22211101122333333322 237999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 86 lv~~Ag~ 92 (259)
T 4e6p_A 86 LVNNAAL 92 (259)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999885
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0035 Score=54.40 Aligned_cols=92 Identities=16% Similarity=0.225 Sum_probs=64.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+|||+|+ |.+|...++.+...|. +|+++++++++.+.+..-+...+. |..+ .+. +.+ +++|+||++.|
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d---~~~-~~~-----~~~d~vi~~ag 71 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV---LTE-ADL-----DSVDAVVDALS 71 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG---CCH-HHH-----TTCSEEEECCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc---ccH-hhc-----ccCCEEEECCc
Confidence 5899998 9999999999998999 999999999887766444443332 2222 222 211 37999999998
Q ss_pred Ch----------HHHHHHHHHhccCCceEEEEcc
Q 016363 283 LT----------SVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 283 ~~----------~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
.. .....+++.++..+++++.++.
T Consensus 72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 62 1234566666665378888863
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0026 Score=58.14 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=67.1
Q ss_pred CCCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhhc--C
Q 016363 201 EVGSTVAIFGL-GA--VGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~--vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~--~ 271 (390)
-.|+++||+|+ |. +|.+.++.+...|+ +|++++++++..+.++ +.+....+..+-.+..++.+.+.+.. -
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 46789999997 66 99999999999999 8999998865444333 23432333222111122333333222 1
Q ss_pred CCccEEEEcccChH-----------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 272 GGADYCFECIGLTS-----------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 272 ~g~D~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+++|++|++.|... ..+.++..+++. |+|+.++...
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~~ 172 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYYG 172 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECGG
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeehh
Confidence 37999999988431 134455566777 9999988543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0026 Score=57.32 Aligned_cols=81 Identities=19% Similarity=0.244 Sum_probs=55.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++.... +..+-.+..++.+.+.+... +++|+
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 9999999999999999 999999998887655 44564432 22111011223333332222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 105 lvnnAg~ 111 (266)
T 3grp_A 105 LVNNAGI 111 (266)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999985
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0034 Score=56.94 Aligned_cols=81 Identities=20% Similarity=0.240 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.... +..+-.+..++.+.+.+... +++|+
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999998 9999999999999999 9999999988776553 3554322 22111011223333333222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 105 lv~nAg~ 111 (277)
T 4dqx_A 105 LVNNAGF 111 (277)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999884
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0019 Score=58.14 Aligned_cols=79 Identities=20% Similarity=0.262 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEE---cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFI---NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~---~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+..... |-.+ ..++.+.+.+...
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD--RHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4678999998 9999999999999999 9999999988766543 23433222 2222 1223333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 80 g~iD~lVnnAG~ 91 (264)
T 3tfo_A 80 GRIDVLVNNAGV 91 (264)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999884
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0025 Score=58.34 Aligned_cols=81 Identities=12% Similarity=0.238 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ | ++|.+.++.+...|+ +|++++++++..+.++ +.+....+..+-.+..++.+.+.+... +
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 6 999999999889999 9999999876544443 344333332222112233333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 108 ~iD~lVnnAG~ 118 (296)
T 3k31_A 108 SLDFVVHAVAF 118 (296)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999884
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0017 Score=59.07 Aligned_cols=81 Identities=12% Similarity=0.154 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCc-EEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~-~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ + +.. ..+..+-.+..++.+.+.+... +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 99999999887655432 2 222 2222221111223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 111 ~iD~lvnnAG~ 121 (281)
T 4dry_A 111 RLDLLVNNAGS 121 (281)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0024 Score=57.75 Aligned_cols=82 Identities=15% Similarity=0.125 Sum_probs=53.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
..+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+..+-.+..++.+.+.+... +++|
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 35788999998 9999999999999999 9999999988876553 45432 2222111011223333332222 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++++.|.
T Consensus 105 ~lVnnAg~ 112 (272)
T 4dyv_A 105 VLFNNAGT 112 (272)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0021 Score=57.24 Aligned_cols=78 Identities=19% Similarity=0.190 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC-CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTD-GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~-~g~D~v 277 (390)
.|+++||+|+ +++|.+.++.+...|+ +|+.++++.. ..+.+++.|.+.....-|..++. .++++.. +++|+.
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~---~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPL---AAKDSFTDAGFDIL 83 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT---TTTTSSTTTCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH---HHHHHHHhCCCCEE
Confidence 5889999998 9999999999999999 9999998753 34566666654332111101122 1222222 489999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
+++.|.
T Consensus 84 VNNAGi 89 (247)
T 4hp8_A 84 VNNAGI 89 (247)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0026 Score=57.69 Aligned_cols=81 Identities=19% Similarity=0.325 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++.. ..+..+-.+..++.+.+.+... +++|+
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 9999999999999999 999999998877655 345533 2222111011222333332222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 107 lvnnAg~ 113 (277)
T 3gvc_A 107 LVANAGV 113 (277)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999885
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0028 Score=56.20 Aligned_cols=81 Identities=17% Similarity=0.206 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcC---CcEEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++. .-.++..+-.+..++.+.+.+... +++
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4688999998 9999999999888999 9999999987765543 232 112222221011223333332221 369
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 84 d~li~~Ag~ 92 (251)
T 1zk4_A 84 STLVNNAGI 92 (251)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999874
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0031 Score=57.94 Aligned_cols=82 Identities=20% Similarity=0.233 Sum_probs=54.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
-.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+... .+..+-.+..++.+.+.+... +
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 36789999998 9999999999999999 9999999988866543 234332 222111011223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 108 ~id~lvnnAg~ 118 (301)
T 3tjr_A 108 GVDVVFSNAGI 118 (301)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999884
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0017 Score=58.10 Aligned_cols=80 Identities=20% Similarity=0.282 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~vi 278 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+..+++.. ..+..+-.+..++.+.+.+... +++|++|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 82 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV 82 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999998 9999999999999999 99999998877333444442 3332222111223333333221 3799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 83 ~~Ag~ 87 (256)
T 2d1y_A 83 NNAAI 87 (256)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99874
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0085 Score=47.63 Aligned_cols=77 Identities=17% Similarity=0.241 Sum_probs=54.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+.+ ++...+.. +. .+ .+.+.+..-.++|+||.++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~-d~---~~-~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVING-DC---TK-IKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEES-CT---TS-HHHHHHTTTTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEc-CC---CC-HHHHHHcCcccCCEEEEee
Confidence 4579999999999999999988898 89999999988877764 46543321 11 11 2233332223799999999
Q ss_pred cChH
Q 016363 282 GLTS 285 (390)
Q Consensus 282 g~~~ 285 (390)
+...
T Consensus 78 ~~~~ 81 (140)
T 1lss_A 78 GKEE 81 (140)
T ss_dssp SCHH
T ss_pred CCch
Confidence 9865
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0031 Score=57.21 Aligned_cols=104 Identities=20% Similarity=0.257 Sum_probs=65.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HH----HHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FE----IGKKFGITDF-INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~----~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++ .+ .+++.+.+.. +..+-.+..++.+.+.+... +
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4789999998 9999999999999999 99999988654 22 2334454322 22111011223333332222 3
Q ss_pred CccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 273 GADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 273 g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++|++|++.|... ..+.+.+.|+.. |+++.++..
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~ 165 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI 165 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence 7999999988421 124445566556 899998854
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0055 Score=52.90 Aligned_cols=92 Identities=13% Similarity=0.208 Sum_probs=63.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+|||+|+ |.+|...++.+...|. +|+++++++++.+.+. -+...+. |..+ .+. +.+ +++|+||.++|
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d---~~~-~~~-----~~~d~vi~~ag 70 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFD---LTL-SDL-----SDQNVVVDAYG 70 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGG---CCH-HHH-----TTCSEEEECCC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccC---hhh-hhh-----cCCCEEEECCc
Confidence 6999998 9999999999999998 9999999988877654 2333222 2222 222 222 37999999998
Q ss_pred Ch--------HHHHHHHHHhccC-CceEEEEccc
Q 016363 283 LT--------SVMNDAFNSSREG-WGKTVILGVE 307 (390)
Q Consensus 283 ~~--------~~~~~~~~~l~~~-~G~~v~~g~~ 307 (390)
.. .....+++.++.. .++++.++..
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred CCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 63 2245666666654 2688877643
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0031 Score=56.25 Aligned_cols=76 Identities=12% Similarity=-0.044 Sum_probs=52.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---cCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+.+.... +. .++.+.+.+... +++|++
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~---~~v~~~~~~~~~~~g~iD~l 76 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-SE---QEPAELIEAVTSAYGQVDVL 76 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-CC---CSHHHHHHHHHHHHSCCCEE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-CH---HHHHHHHHHHHHHhCCCCEE
Confidence 46899998 9999999999999999 99999998877655432 34332221 22 345444443322 379999
Q ss_pred EEcccCh
Q 016363 278 FECIGLT 284 (390)
Q Consensus 278 id~~g~~ 284 (390)
|++.|..
T Consensus 77 v~nAg~~ 83 (254)
T 1zmt_A 77 VSNDIFA 83 (254)
T ss_dssp EEECCCC
T ss_pred EECCCcC
Confidence 9988743
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0029 Score=56.25 Aligned_cols=81 Identities=23% Similarity=0.305 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEEEcCCCCC-CcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCG-DKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~-~~~~~~~i~~~~~--~g~D~ 276 (390)
.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ .+++.......-|.. ..++.+.+.+... +++|+
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 5789999998 9999999999999999 999999998887655 345544332221211 1222233332221 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 84 lv~nAg~ 90 (247)
T 3rwb_A 84 LVNNASI 90 (247)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999884
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0038 Score=56.09 Aligned_cols=104 Identities=21% Similarity=0.227 Sum_probs=64.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc-----CCc-EEEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF-----GIT-DFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~-----g~~-~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ +.. ..+..+-.+..++.+.+.+...
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 4679999998 9999999999999999 9999999987765432 22 111 1222111011223333333221
Q ss_pred CCccEEEEcccChH-----------------HHHHHHHHhcc-----CCceEEEEccc
Q 016363 272 GGADYCFECIGLTS-----------------VMNDAFNSSRE-----GWGKTVILGVE 307 (390)
Q Consensus 272 ~g~D~vid~~g~~~-----------------~~~~~~~~l~~-----~~G~~v~~g~~ 307 (390)
+++|++|++.|... ..+.+++.++. . |+++.++..
T Consensus 85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~ 141 (267)
T 2gdz_A 85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSL 141 (267)
T ss_dssp SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCc
Confidence 37999999998421 12334455543 4 889988754
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0037 Score=57.11 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=64.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HHH----HHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEI----GKKFGITDF-INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~----~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.|+++||+|+ |++|.+.++.+...|+ +|+++++++++ .+. +++.+.... +..+-.+..++.+.+.+... +
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 99999987653 222 233454332 21111011223333333222 3
Q ss_pred CccEEEEcccChH--------------------------HHHHHHHHhccCCceEEEEcc
Q 016363 273 GADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 273 g~D~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
++|++|++.|... ..+.++..+++. |+|+.++.
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS 183 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTAS 183 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECC
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEec
Confidence 7999999877320 133444556666 89998874
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0049 Score=54.95 Aligned_cols=81 Identities=16% Similarity=0.222 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--HHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+...+.... +..+-.+..++.+.+.+... +++|
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999998 9999999999999999 99999988752 122333343322 22111011223333332222 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|++.|.
T Consensus 82 ~lv~~Ag~ 89 (255)
T 2q2v_A 82 ILVNNAGI 89 (255)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999873
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.004 Score=56.35 Aligned_cols=79 Identities=19% Similarity=0.173 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhcC-C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMTD-G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~~-~ 272 (390)
.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. ..+... .+ |-.+ ..++.+.+.+... +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE--AGAGTDLIERAEAIA 108 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS--TTHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 5789999998 9999999999999999 9999999887755442 234332 22 2222 2223222222211 4
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 109 ~iD~lvnnAg~ 119 (275)
T 4imr_A 109 PVDILVINASA 119 (275)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 89999999984
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0025 Score=57.04 Aligned_cols=81 Identities=21% Similarity=0.255 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc-----CCc-EEEcCCCCCCcCHHHHHHhhcCC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF-----GIT-DFINPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~-----g~~-~v~~~~~~~~~~~~~~i~~~~~~- 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ +.. ..+..+-.+..++.+.+.+....
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4689999998 9999999999888999 9999999987765442 22 212 22221110112333334333333
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 85 gid~lv~~Ag~ 95 (260)
T 2z1n_A 85 GADILVYSTGG 95 (260)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 59999999883
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0027 Score=57.86 Aligned_cols=79 Identities=19% Similarity=0.133 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEE-EcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
+|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ ++.... +..+-.+..++.+.+.+. +++|++|
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv 91 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLI 91 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence 5789999998 9999999999999999 99999999988776643 443322 211110011222222222 4799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 92 ~nAg~ 96 (291)
T 3rd5_A 92 NNAGI 96 (291)
T ss_dssp ECCCC
T ss_pred ECCcC
Confidence 99884
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0052 Score=55.44 Aligned_cols=104 Identities=22% Similarity=0.352 Sum_probs=65.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.|+++||+|+ +++|.+.++.+...|+ +|++++++ .++.+.+ ++.+.... +..+-.+..++.+.+.+... +
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 88888544 3444332 33454432 22221111223333333322 3
Q ss_pred CccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 273 GADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 273 g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++|++|++.|... ..+.+...+++. |+++.++..
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~ 167 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSN 167 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCG
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeCh
Confidence 7999999988411 234455667777 999988753
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0029 Score=54.26 Aligned_cols=102 Identities=12% Similarity=0.135 Sum_probs=70.7
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~ 267 (390)
+....+++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+.+ .++..+- .+.+.
T Consensus 32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~------~~~~~ 104 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA------PEGLD 104 (204)
T ss_dssp HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT------TTTCT
T ss_pred HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh------hhhhh
Confidence 34667899999999999974 8888888888644499999999998887754 3432 2222211 11111
Q ss_pred hhcCCCccEEEEcccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.+|+|+..... ...++.+.+.|+++ |+++...
T Consensus 105 --~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 142 (204)
T 3e05_A 105 --DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNA 142 (204)
T ss_dssp --TSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEE
T ss_pred --cCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 01379999976542 33467888999999 9998764
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0035 Score=55.31 Aligned_cols=77 Identities=9% Similarity=0.101 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCC--CccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDG--GADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~v 277 (390)
++.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++....++..+- .+ .+.+.++... ++|++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~v 80 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL---GD-WEATERALGSVGPVDLL 80 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT---TC-HHHHHHHHTTCCCCCEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeC---CC-HHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999999999999 9999999988776553 332223332221 11 2233333323 79999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|++.|.
T Consensus 81 i~~Ag~ 86 (244)
T 3d3w_A 81 VNNAAV 86 (244)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999884
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0026 Score=56.45 Aligned_cols=79 Identities=20% Similarity=0.243 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++...+ .|-.+ ..++.+.+.+... +++|+
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~ 80 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG 80 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4678999998 9999999999999999 9999999988776554 3453222 12222 1223333333222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 81 lvn~Ag~ 87 (245)
T 1uls_A 81 VVHYAGI 87 (245)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999883
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.004 Score=51.86 Aligned_cols=103 Identities=19% Similarity=0.205 Sum_probs=70.8
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~ 269 (390)
.....++++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++ .+.. .++...+ ..+.+..
T Consensus 18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d-----~~~~~~~- 90 (178)
T 3hm2_A 18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQG-----APRAFDD- 90 (178)
T ss_dssp HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECC-----TTGGGGG-
T ss_pred HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecc-----hHhhhhc-
Confidence 3566789999999999985 8888888888743399999999988877764 3443 2221111 1111111
Q ss_pred cCCCccEEEEcccCh--HHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCFECIGLT--SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vid~~g~~--~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.+|+|+...... ..++.+.+.|+++ |+++...
T Consensus 91 ~~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 127 (178)
T 3hm2_A 91 VPDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANA 127 (178)
T ss_dssp CCSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEE
T ss_pred cCCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEe
Confidence 114799999655433 2588999999999 9998665
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0069 Score=51.31 Aligned_cols=99 Identities=20% Similarity=0.192 Sum_probs=65.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC---------CeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHh
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRA---------SKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKE 268 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~---------~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~ 268 (390)
-++++++||.+|+|. |..+..+++..+. .+|++++.++... +..-..+ ..+- ...++.+.+.+
T Consensus 19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~-~~~~~~~~~~~ 91 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADV-TDPRTSQRILE 91 (196)
T ss_dssp CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCT-TSHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccC-CCHHHHHHHHH
Confidence 368999999999987 9999999998873 4899999887531 1111233 2211 11223444444
Q ss_pred hcCC-CccEEEE-----cccCh------------HHHHHHHHHhccCCceEEEEc
Q 016363 269 MTDG-GADYCFE-----CIGLT------------SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~-g~D~vid-----~~g~~------------~~~~~~~~~l~~~~G~~v~~g 305 (390)
..++ .+|+|+. +++.. ..+..+.+.|+++ |+++..-
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~ 145 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKT 145 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEe
Confidence 4555 8999994 33332 3466788999999 9998664
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0021 Score=57.37 Aligned_cols=81 Identities=12% Similarity=0.163 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----c--C-C-cEEEcCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--G-I-TDFINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~--g-~-~~v~~~~~~~~~~~~~~i~~~~~- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ . + . -..+..+-.+..++.+.+.+...
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 5789999998 9999999998888999 99999999887665532 1 2 1 12222221011223333333222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 379999999985
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0028 Score=57.29 Aligned_cols=79 Identities=19% Similarity=0.224 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc---C---Cc-EEE--cCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---G---IT-DFI--NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~---g---~~-~v~--~~~~~~~~~~~~~i~~~~ 270 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ . .. ..+ |-.+ ..++.+.+.+..
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~ 81 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL 81 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC--HHHHHHHHHHHH
Confidence 4678999998 9999999998888999 9999999988766542 22 2 11 122 2222 122333333222
Q ss_pred C--CCccEEEEcccC
Q 016363 271 D--GGADYCFECIGL 283 (390)
Q Consensus 271 ~--~g~D~vid~~g~ 283 (390)
. +++|++|++.|.
T Consensus 82 ~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 82 GKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHSCCCEEEECCC-
T ss_pred HHcCCCCEEEECCCC
Confidence 2 379999999874
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0041 Score=56.99 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCC---c-EEE--cCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI---T-DFI--NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~---~-~v~--~~~~~~~~~~~~~i~~~~ 270 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+. . .++ |-.+ ..++.+.+.+..
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 101 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL 101 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC--HHHHHHHHHHHH
Confidence 4688999998 9999999999999999 9999999988765442 2232 2 222 2222 122333333222
Q ss_pred C--CCccEEEEcccC
Q 016363 271 D--GGADYCFECIGL 283 (390)
Q Consensus 271 ~--~g~D~vid~~g~ 283 (390)
. +++|++|++.|.
T Consensus 102 ~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 102 AKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 1 379999998873
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0049 Score=55.18 Aligned_cols=81 Identities=14% Similarity=0.132 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHHH----hcCCcEE-EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGK----KFGITDF-INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~----~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ |++|.+.++.+...|+ +|+++ .+++++.+.+. +.+.... +..+-.+..++.+.+.+... +
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 88886 88877655442 2344322 22111011223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 82 ~id~lv~nAg~ 92 (258)
T 3oid_A 82 RLDVFVNNAAS 92 (258)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0028 Score=57.15 Aligned_cols=81 Identities=16% Similarity=0.182 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +.....+..+-.+..++.+.+.+... +++|++
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 86 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999999999999 99999999887765543 33222232221011223333332221 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|++.|.
T Consensus 87 v~nAg~ 92 (270)
T 1yde_A 87 VNNAGH 92 (270)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998874
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0048 Score=55.61 Aligned_cols=106 Identities=22% Similarity=0.248 Sum_probs=66.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHH----HHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEI----GKKFGITDF-INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~----~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~-- 271 (390)
-.|.++||+|+ +++|.+.++.+...|+ +|++++++ +++.+. ++..+.+.. +..+-.+..++.+.+.+...
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35789999998 9999999999999999 88887654 444333 334454432 22221111223333333322
Q ss_pred CCccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 272 GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 272 ~g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+++|+++++.|... ..+.++..++++ |+++.++...
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~ 155 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT 155 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence 37999999888421 234556677777 9999998643
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0037 Score=56.31 Aligned_cols=101 Identities=15% Similarity=0.224 Sum_probs=63.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHH----HhcCCcEE-E--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGITDF-I--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~~g~~~v-~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.+ +..+.... + |-.+ ..++.+.+.+...
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD--PAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 5789999998 9999999998888999 88877 5555554433 33444322 2 2222 1223333332222
Q ss_pred -CCccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEcc
Q 016363 272 -GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 272 -~g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+++|++|++.|... ..+.++..++.. |+++.++.
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS 162 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMST 162 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeC
Confidence 37999999988421 133455667777 99998874
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0034 Score=56.23 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEecCChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.+|||+|+ |.+|.+.++.+.. .|+ +|+++++++++.+.+ +..+.. .++..+-.+..++.+.+.+... +
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5789999998 9999999888887 899 999999998765543 222422 2222211011223333332221 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 82 ~id~li~~Ag~ 92 (276)
T 1wma_A 82 GLDVLVNNAGI 92 (276)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999874
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0062 Score=53.45 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=51.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-----hcCCcEE-EcCCCCCCcCHHHHHHhhc--CCC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-----KFGITDF-INPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-----~~g~~~v-~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ..+.... +..+-.+..++.+.+.+.. .++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 678999998 9999999999999999 8999999988765442 2344332 2211100111211111111 137
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 81 id~li~~Ag~ 90 (235)
T 3l77_A 81 VDVVVANAGL 90 (235)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999884
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0044 Score=54.70 Aligned_cols=76 Identities=16% Similarity=0.215 Sum_probs=52.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEEEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCFE 279 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~vid 279 (390)
+.++||+|+ |++|.+.++.+...|+ +|+++++++++ ..++++.. .+..+-.+ .++.+.+.+... +++|++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~-~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~ 76 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAV-PLPTDLEK-DDPKGLVKRALEALGGLHVLVH 76 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCE-EEECCTTT-SCHHHHHHHHHHHHTSCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcE-EEecCCch-HHHHHHHHHHHHHcCCCCEEEE
Confidence 578999998 9999999999999999 99999998876 33445532 22222111 344444443322 37999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+.|.
T Consensus 77 ~Ag~ 80 (239)
T 2ekp_A 77 AAAV 80 (239)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9874
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0064 Score=55.02 Aligned_cols=81 Identities=21% Similarity=0.289 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-------------ChhhHHHH----HhcCCcEEE---cCCCCC
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-------------NPEKFEIG----KKFGITDFI---NPATCG 258 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-------------~~~~~~~~----~~~g~~~v~---~~~~~~ 258 (390)
--.|+++||+|+ +++|.+.++.+...|+ +|+++++ ++++.+.+ +..+..... |-.+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-- 88 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD-- 88 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC--
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC--
Confidence 346889999998 9999999999999999 9999987 45555443 233433222 2222
Q ss_pred CcCHHHHHHhhcC--CCccEEEEcccC
Q 016363 259 DKTVSQVIKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 259 ~~~~~~~i~~~~~--~g~D~vid~~g~ 283 (390)
..++.+.+.+... +++|+++++.|.
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 1223333332222 379999999884
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0034 Score=56.86 Aligned_cols=81 Identities=20% Similarity=0.213 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+.. ..+..+-.+..++.+.+.+... ++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 9999999988765543 23432 2222211111223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 110 iD~lvnnAg~ 119 (276)
T 3r1i_A 110 IDIAVCNAGI 119 (276)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0094 Score=55.83 Aligned_cols=101 Identities=22% Similarity=0.209 Sum_probs=64.5
Q ss_pred HHhCC--CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-------------EcCCCCCCc
Q 016363 196 KVAGV--EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-------------INPATCGDK 260 (390)
Q Consensus 196 ~~~~~--~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-------------~~~~~~~~~ 260 (390)
+..+. -.|++|+|.|.|.+|+.+++.++..|+ +|++.+.++.+.+..++++++.+ +.... . .
T Consensus 166 ~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~-~-~ 242 (355)
T 1c1d_A 166 AHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAM-G-G 242 (355)
T ss_dssp HHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSC-S-C
T ss_pred HhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHH-H-h
Confidence 33454 579999999999999999999999999 99999988776555666665432 11000 0 0
Q ss_pred CH-HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEE
Q 016363 261 TV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 261 ~~-~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~ 303 (390)
.+ .+.+..+ +.++|+++..++.+.+.+.+.|..+ |.++.
T Consensus 243 ~I~~~~~~~l---k~~iVie~AN~p~t~~eA~~~L~~~-gIlv~ 282 (355)
T 1c1d_A 243 VITTEVARTL---DCSVVAGAANNVIADEAASDILHAR-GILYA 282 (355)
T ss_dssp CBCHHHHHHC---CCSEECCSCTTCBCSHHHHHHHHHT-TCEEC
T ss_pred hcCHHHHhhC---CCCEEEECCCCCCCCHHHHHHHHhC-CEEEE
Confidence 01 1122211 4677777776665333556677766 65543
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0034 Score=56.40 Aligned_cols=81 Identities=23% Similarity=0.251 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c-----CCcE-EEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GITD-FINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~-----g~~~-v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ + +... .+..+-.+..++.+.+.+...
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4789999998 9999999999888999 99999999887654421 1 4332 221111011223333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 91 g~id~lv~nAg~ 102 (267)
T 1iy8_A 91 GRIDGFFNNAGI 102 (267)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999999873
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0018 Score=55.80 Aligned_cols=100 Identities=15% Similarity=0.049 Sum_probs=69.8
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~ 267 (390)
+.+...++++++||-+|+| .|..+..+++. +. +|++++.+++..+.+++ .+.. .++.. +..+...
T Consensus 69 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~------d~~~~~~ 139 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHG------DGWQGWQ 139 (210)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEES------CGGGCCG
T ss_pred HHHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEEC------CcccCCc
Confidence 3467788999999999997 47788888887 66 99999999998877754 3432 22221 1211111
Q ss_pred hhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.+|+|+....-......+.+.|+++ |+++..-
T Consensus 140 --~~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~ 174 (210)
T 3lbf_A 140 --ARAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV 174 (210)
T ss_dssp --GGCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred --cCCCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence 1238999998766555456788999998 8887653
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0037 Score=55.64 Aligned_cols=96 Identities=17% Similarity=0.190 Sum_probs=63.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC--CccEEEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG--GADYCFE 279 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~vid 279 (390)
+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+. ....++-.+ ..++.+.+.+.... ++|++|+
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d--~~~v~~~~~~~~~~~g~iD~li~ 93 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSG--EEEIKSVIEKINSKSIKVDTFVC 93 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSS--HHHHHHHHHHHHTTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCC--HHHHHHHHHHHHHHcCCCCEEEE
Confidence 679999998 9999999999999999 89999998765421 111122111 13344444444332 7999999
Q ss_pred cccCh-------H-------------------HHHHHHHHhccCCceEEEEccc
Q 016363 280 CIGLT-------S-------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 280 ~~g~~-------~-------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+.|.. . ..+.+...+++. |+|+.++..
T Consensus 94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~ 146 (251)
T 3orf_A 94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGAS 146 (251)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEech
Confidence 98831 0 133445566666 899998854
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0074 Score=54.64 Aligned_cols=101 Identities=20% Similarity=0.220 Sum_probs=63.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC------------hhhHHHH----HhcCCcEE-E--cCCCCCCcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEIG----KKFGITDF-I--NPATCGDKT 261 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~------------~~~~~~~----~~~g~~~v-~--~~~~~~~~~ 261 (390)
.|.++||+|+ +++|.+.++.+...|+ +|++++++ .++.+.+ +..+.... + |-.+ ..+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD--RAA 85 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC--HHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC--HHH
Confidence 5789999998 9999999999999999 99999876 4443332 23443322 2 2222 122
Q ss_pred HHHHHHhhcC--CCccEEEEcccChH-----------------------HHHHHHHHhccCCceEEEEcc
Q 016363 262 VSQVIKEMTD--GGADYCFECIGLTS-----------------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 262 ~~~~i~~~~~--~g~D~vid~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+.+.+.+... +++|++|++.|... ..+.++..+... |+++.++.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS 154 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-ASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC-cEEEEecc
Confidence 3233333222 37999999988421 123344455556 89998875
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0038 Score=55.48 Aligned_cols=81 Identities=19% Similarity=0.222 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+... .+..+-.+..++.+.+.+... ++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 9999999999999999 9999999988765442 234332 222111011223333332222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 85 id~lv~nAg~ 94 (247)
T 2jah_A 85 LDILVNNAGI 94 (247)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998873
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0017 Score=57.23 Aligned_cols=101 Identities=19% Similarity=0.264 Sum_probs=71.0
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEE-EcCCCCCCcCHHHHHHh
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDF-INPATCGDKTVSQVIKE 268 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v-~~~~~~~~~~~~~~i~~ 268 (390)
+.+...++++++||.+|+| .|..++.+++..+. +|++++.+++..+.+++ .|...+ +... ++. ..
T Consensus 83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~-----d~~---~~ 152 (235)
T 1jg1_A 83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG-----DGS---KG 152 (235)
T ss_dssp HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-----CGG---GC
T ss_pred HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC-----Ccc---cC
Confidence 3466788999999999998 78889999998874 99999999988777754 343222 1111 221 11
Q ss_pred hcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 269 MTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+..+ ++|+|+.+..-......+.+.|+++ |+++..-
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~ 189 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPV 189 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred CCCCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEE
Confidence 2223 5999998766555456788999998 8876543
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0036 Score=56.12 Aligned_cols=79 Identities=28% Similarity=0.416 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc----CCcE-EE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GITD-FI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~----g~~~-v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ +... .+ |-.+ ..++.+.+.+...
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT--PEGVDAVVESVRSS 82 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4688999998 9999999999999999 9999999988765442 22 4332 22 2222 1223333332222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 83 ~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 83 FGGADILVNNAGT 95 (263)
T ss_dssp HSSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 379999999874
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0024 Score=57.08 Aligned_cols=81 Identities=17% Similarity=0.171 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+... .+..+-.+..++.+.+.+... ++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999999999999 99999999988765543 23322 222111011223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 84 id~lv~nAg~ 93 (257)
T 3imf_A 84 IDILINNAAG 93 (257)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0088 Score=54.61 Aligned_cols=105 Identities=14% Similarity=0.157 Sum_probs=65.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh--hHHH----HHhcCCcEEEcCCCCCCc-CHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEI----GKKFGITDFINPATCGDK-TVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~----~~~~g~~~v~~~~~~~~~-~~~~~i~~~~~-- 271 (390)
.|+++||+|+ +++|.+.++.+...|+ +|++++++.+ +.+. +++.+....+..-+..+. ++.+.+.+...
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5789999998 9999999999999999 9999887632 2322 233454433322221112 22222222222
Q ss_pred CCccEEEEcccChH--------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 272 GGADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 272 ~g~D~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+++|+++++.|... ..+.++..++++ |+|+.++...
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~~ 188 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSIQ 188 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCGG
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECChh
Confidence 37999999888411 123444566667 8999988543
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0031 Score=56.11 Aligned_cols=81 Identities=23% Similarity=0.266 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+... .+..+-.+..++.+.+.+... ++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 99999999887665432 24322 222221111222233332221 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 87 id~li~~Ag~ 96 (253)
T 3qiv_A 87 IDYLVNNAAI 96 (253)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999875
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0039 Score=55.70 Aligned_cols=81 Identities=19% Similarity=0.218 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +++... .+..+-.+..++.+.+.+... +++|+
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4689999998 9999999999999999 9999999998877654 455432 222211111223333333222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 87 li~~Ag~ 93 (261)
T 3n74_A 87 LVNNAGI 93 (261)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999874
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0024 Score=57.33 Aligned_cols=81 Identities=14% Similarity=0.167 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcC-Cc-EEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFG-IT-DFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g-~~-~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+ .. ..+..+-.+..++.+.+.+... +
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 5789999998 9999999999999999 9999999988765442 233 22 2222211011223333332222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 88 ~id~lvnnAg~ 98 (262)
T 3pk0_A 88 GIDVVCANAGV 98 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0056 Score=53.96 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCC--CccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG--GADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~v 277 (390)
++.++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.+ .....++..+- .+ .+.+.++..+ ++|++
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~v 80 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDL---GD-WDATEKALGGIGPVDLL 80 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT---TC-HHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecC---CC-HHHHHHHHHHcCCCCEE
Confidence 4679999998 9999999999999999 99999999887665543 32223332221 11 2233333333 69999
Q ss_pred EEccc
Q 016363 278 FECIG 282 (390)
Q Consensus 278 id~~g 282 (390)
|++.|
T Consensus 81 i~~Ag 85 (244)
T 1cyd_A 81 VNNAA 85 (244)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99988
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.002 Score=55.33 Aligned_cols=131 Identities=18% Similarity=0.248 Sum_probs=78.6
Q ss_pred ccceeEE-eeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhC--CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEE
Q 016363 156 SFTEYSV-VDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG--VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIG 232 (390)
Q Consensus 156 ~~a~~~~-v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~--~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~ 232 (390)
.|.+|.. .+....+.+++++.+..... .+.-. +.+... ++++++||-+|+|. |..+..+++ .+..+|++
T Consensus 17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-----~~~~~-~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~ 88 (205)
T 3grz_A 17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-----QTTQL-AMLGIERAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLA 88 (205)
T ss_dssp TTCCCCCSSTTCEEEEESCC-----CCH-----HHHHH-HHHHHHHHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEE
T ss_pred cccccccCCCCceeEEecCCcccCCCCC-----ccHHH-HHHHHHHhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEE
Confidence 4777777 67788888888876655421 11111 112222 67899999999875 667777766 45559999
Q ss_pred ecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH---HHHHHHHHhccCCceEEE
Q 016363 233 VDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS---VMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 233 ~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~---~~~~~~~~l~~~~G~~v~ 303 (390)
++.+++..+.+++ .+.. .++..+ +.+ ...+.+|+|+....... .++.+.+.|+++ |+++.
T Consensus 89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d------~~~----~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~ 157 (205)
T 3grz_A 89 TDISDESMTAAEENAALNGIYDIALQKTS------LLA----DVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIF 157 (205)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCCEEEESS------TTT----TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEecc------ccc----cCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEE
Confidence 9999988877754 3432 222221 111 12348999997554332 134455678888 88887
Q ss_pred Ec
Q 016363 304 LG 305 (390)
Q Consensus 304 ~g 305 (390)
..
T Consensus 158 ~~ 159 (205)
T 3grz_A 158 SG 159 (205)
T ss_dssp EE
T ss_pred Ee
Confidence 54
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0026 Score=56.46 Aligned_cols=79 Identities=20% Similarity=0.186 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.++..-..+..+- .+.+-.+.+.+.. +++|++|++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-~~id~lv~~ 81 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDV-TKKKQIDQFANEV-ERLDVLFNV 81 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCT-TCHHHHHHHHHHC-SCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeC-CCHHHHHHHHHHh-CCCCEEEEC
Confidence 4788999998 9999999999999999 9999999987765544332112222111 1122222222222 379999999
Q ss_pred ccC
Q 016363 281 IGL 283 (390)
Q Consensus 281 ~g~ 283 (390)
.|.
T Consensus 82 Ag~ 84 (246)
T 2ag5_A 82 AGF 84 (246)
T ss_dssp CCC
T ss_pred Ccc
Confidence 884
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0031 Score=56.29 Aligned_cols=81 Identities=20% Similarity=0.229 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++... .+..+-.+..++.+.+.+... +++|+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999998 9999999999999999 9999999988766543 344322 221111011223333333222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 83 lv~nAg~ 89 (254)
T 1hdc_A 83 LVNNAGI 89 (254)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999874
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0032 Score=55.20 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=52.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~vi 278 (390)
+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.-..+..+-.+..++.+.+.+... +++|++|
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV 83 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 568999998 9999999999989999 9999999988776554 343222332221111223333332221 3799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 84 ~~Ag~ 88 (234)
T 2ehd_A 84 NNAGV 88 (234)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99883
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0026 Score=58.23 Aligned_cols=81 Identities=14% Similarity=0.164 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc---C-Cc-EEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---G-IT-DFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~---g-~~-~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ + .. ..+..+-.+..++.+.+.+... +
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 9999999988765543 22 3 12 2222211011222333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 119 ~iD~lvnnAg~ 129 (293)
T 3rih_A 119 ALDVVCANAGI 129 (293)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0044 Score=55.28 Aligned_cols=79 Identities=15% Similarity=0.088 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEE-EcCCCCCCcCH---HHHHHhhcCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF-INPATCGDKTV---SQVIKEMTDG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v-~~~~~~~~~~~---~~~i~~~~~~ 272 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +.+.... +..+-.+..++ .+.+.+. +
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g 82 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--A 82 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--S
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--C
Confidence 5789999998 9999999999999999 9999999988766543 2343322 21111011222 2223332 5
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 83 ~id~lv~nAg~ 93 (252)
T 3h7a_A 83 PLEVTIFNVGA 93 (252)
T ss_dssp CEEEEEECCCC
T ss_pred CceEEEECCCc
Confidence 89999999884
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0025 Score=57.19 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
-.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+... ++..+-.+..++.+.+.+... +
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 35789999998 9999999999888999 9999999988765543 234332 221111011223333332221 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|+++|.
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999885
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0046 Score=55.37 Aligned_cols=81 Identities=16% Similarity=0.174 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +... ..+..+-.+..++.+.+.+... +++|+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999998 9999999999999999 99999999887765543 3221 2222111011223333332221 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 90 lv~~Ag~ 96 (263)
T 3ak4_A 90 LCANAGV 96 (263)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999883
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.004 Score=56.65 Aligned_cols=81 Identities=12% Similarity=0.157 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ .+... .+..+-.+..++.+.+.+... ++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999998 9999999999999999 99999999887665532 23332 222211111223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 106 iD~lVnnAg~ 115 (283)
T 3v8b_A 106 LDIVVANAGI 115 (283)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0065 Score=52.62 Aligned_cols=96 Identities=11% Similarity=0.112 Sum_probs=63.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|||+|+ |.+|...++.+...|. +|+++++++++.+.+ .+. .++..+- .+..+.+.+... ++|+||.++|.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~---~d~~~~~~~~~~-~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDV---DWTPEEMAKQLH-GMDAIINVSGS 73 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCT---TSCHHHHHTTTT-TCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEecc---cCCHHHHHHHHc-CCCEEEECCcC
Confidence 6999998 9999999999999998 999999998765433 122 2332222 121345555443 79999999985
Q ss_pred hH---------HHHHHHHHhccCC-ceEEEEcccC
Q 016363 284 TS---------VMNDAFNSSREGW-GKTVILGVEM 308 (390)
Q Consensus 284 ~~---------~~~~~~~~l~~~~-G~~v~~g~~~ 308 (390)
.. ....+++.++..+ ++++.++...
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 32 2334455555441 5888887543
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0017 Score=57.17 Aligned_cols=102 Identities=13% Similarity=0.114 Sum_probs=68.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~~~ 269 (390)
......++++||-+|+| .|..++.+++.....+|++++.+++..+.+++ .|.. ..+.. .++.+.+...
T Consensus 48 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~-----~d~~~~~~~~ 121 (233)
T 2gpy_A 48 HLLKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLF-----GDALQLGEKL 121 (233)
T ss_dssp HHHHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC-----SCGGGSHHHH
T ss_pred HHHhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE-----CCHHHHHHhc
Confidence 44456688999999998 78888889988732399999999998887765 3432 11211 1233323333
Q ss_pred c-CCCccEEEEcccC---hHHHHHHHHHhccCCceEEEE
Q 016363 270 T-DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 270 ~-~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 304 (390)
. .+.+|+|+..... ...+..+.+.|+++ |+++..
T Consensus 122 ~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~ 159 (233)
T 2gpy_A 122 ELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSD 159 (233)
T ss_dssp TTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEE
T ss_pred ccCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 2 3489999865543 23467788899998 998765
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0042 Score=56.19 Aligned_cols=81 Identities=11% Similarity=0.134 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+... .+..+-.+..++.+.+.+.. -++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 9999999999999999 999999998776543 2234332 22211101122333333222 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 100 iD~lv~~Ag~ 109 (277)
T 2rhc_B 100 VDVLVNNAGR 109 (277)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999873
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0034 Score=55.96 Aligned_cols=82 Identities=18% Similarity=0.194 Sum_probs=53.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----c-CCc-EEE--cCCCCCCcCHHHHHHhhc-
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F-GIT-DFI--NPATCGDKTVSQVIKEMT- 270 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~-g~~-~v~--~~~~~~~~~~~~~i~~~~- 270 (390)
-.|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ . +.. ..+ |....+..++.+.+.+..
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 35789999998 9999999999989999 99999999887655432 1 211 222 221111122333333322
Q ss_pred -CCCccEEEEcccC
Q 016363 271 -DGGADYCFECIGL 283 (390)
Q Consensus 271 -~~g~D~vid~~g~ 283 (390)
.+++|++|++.|.
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 2379999999884
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.005 Score=54.73 Aligned_cols=81 Identities=21% Similarity=0.226 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHH-HHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE-IGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~-~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++ ++.+ .+++.+... .+..+-.+..++.+.+.+... +++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999998 9999999999999999 999999987 6554 344555432 222111011223333332221 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|++.|.
T Consensus 85 ~lv~nAg~ 92 (249)
T 2ew8_A 85 ILVNNAGI 92 (249)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0056 Score=54.75 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHH---hhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIK---EMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~---~~~ 270 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+... .+ |-.+ ..++.+.+. +..
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999999888999 9999999987765432 234332 22 2222 122222222 222
Q ss_pred CCCccEEEEcccC
Q 016363 271 DGGADYCFECIGL 283 (390)
Q Consensus 271 ~~g~D~vid~~g~ 283 (390)
.+++|++|++.|.
T Consensus 85 ~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 85 HGKLNILVNNAGI 97 (260)
T ss_dssp TTCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 2579999999883
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0067 Score=54.25 Aligned_cols=103 Identities=18% Similarity=0.184 Sum_probs=62.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.|.++||+|+ +++|.+.++.+...|+ +|+++ .+++++.+.+ ++.+.. ..+..+-.+..++.+.+.+... +
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 5789999998 9999999999999999 88888 5555544332 334433 2222211011223333333222 3
Q ss_pred CccEEEEcccChH--------------------------HHHHHHHHhccCCceEEEEcc
Q 016363 273 GADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 273 g~D~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
++|+++++.|... ..+.++..+++. |+++.++.
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS 144 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKG-GAIVTFSS 144 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CEEEEEcC
Confidence 7999999887430 123344455566 89998875
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0036 Score=55.42 Aligned_cols=82 Identities=13% Similarity=0.146 Sum_probs=53.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcC-Cc-EEE--cCCCCCCcCHHHHHHhhcC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFG-IT-DFI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g-~~-~v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
-.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+ .. .++ +.+..+..++.+.+.+...
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 35789999998 9999999999999999 9999999988766543 233 21 222 2211111222222332221
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 91 ~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 91 EFGRLDGLLHNASI 104 (247)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 379999999884
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0043 Score=55.66 Aligned_cols=79 Identities=13% Similarity=0.144 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh---HHHH----HhcCCcEE-E--cCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK---FEIG----KKFGITDF-I--NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~---~~~~----~~~g~~~v-~--~~~~~~~~~~~~~i~~~~ 270 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.++++... .+.+ +..+.... + |-.+ ..++.+.+.+..
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 86 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN--EEEVAKLFDFAE 86 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS--HHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHH
Confidence 5789999998 9999999999999999 89998765433 3222 22343322 2 2222 122333333222
Q ss_pred C--CCccEEEEcccC
Q 016363 271 D--GGADYCFECIGL 283 (390)
Q Consensus 271 ~--~g~D~vid~~g~ 283 (390)
. +++|+++++.|.
T Consensus 87 ~~~g~iD~lvnnAg~ 101 (262)
T 3ksu_A 87 KEFGKVDIAINTVGK 101 (262)
T ss_dssp HHHCSEEEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 2 379999999983
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0022 Score=57.57 Aligned_cols=79 Identities=11% Similarity=0.046 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH-HHHHhcCCcEEE-cCCCCCCcCHHHHHHhhc--CCCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGITDFI-NPATCGDKTVSQVIKEMT--DGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~--~~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++. +.+++.+...+. |-.+ ..++.+.+.+.. -+++|+
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~ 102 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC--ETGIMAFIDLLKTQTSSLRA 102 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS--HHHHHHHHHHHHHHCSCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC--HHHHHHHHHHHHHhcCCCCE
Confidence 4678999998 9999999999989999 899999988763 444555643322 2222 122333333322 237999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 103 lv~nAg~ 109 (260)
T 3gem_A 103 VVHNASE 109 (260)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999884
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0028 Score=56.38 Aligned_cols=79 Identities=25% Similarity=0.362 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. ..+ |-.+ ..++.+.+.+... +++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN--PESIEAVLKAITDEFGGV 84 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence 5789999998 9999999999999999 99999999887765543 3322 222 2222 1223333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++++.|.
T Consensus 85 D~lv~nAg~ 93 (248)
T 3op4_A 85 DILVNNAGI 93 (248)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999884
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0056 Score=55.47 Aligned_cols=96 Identities=13% Similarity=0.079 Sum_probs=64.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+|||+|+ |.+|...++.+... |. +|+++++++++...+...+...+. |..+ .+.+.+... ++|+||.+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d------~~~l~~~~~-~~d~vi~~a 73 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN------QESMVEAFK-GMDTVVFIP 73 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC------HHHHHHHTT-TCSEEEECC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC------HHHHHHHHh-CCCEEEEeC
Confidence 5899998 99999999988877 88 999999998876555444443332 2222 233444433 799999998
Q ss_pred cCh-------HHHHHHHHHhccCC-ceEEEEcccC
Q 016363 282 GLT-------SVMNDAFNSSREGW-GKTVILGVEM 308 (390)
Q Consensus 282 g~~-------~~~~~~~~~l~~~~-G~~v~~g~~~ 308 (390)
+.. .....+++.++..+ ++++.++...
T Consensus 74 ~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 74 SIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 852 12345566665542 4788887644
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0021 Score=55.63 Aligned_cols=101 Identities=15% Similarity=0.208 Sum_probs=71.2
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC--CCeEEEecCChhhHHHHHh----cCCcEE-EcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR--ASKIIGVDINPEKFEIGKK----FGITDF-INPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g--~~~Vi~~~~~~~~~~~~~~----~g~~~v-~~~~~~~~~~~~~~i 266 (390)
+.+...+.++++||.+|+| .|..+..+++..+ . +|++++.+++..+.+++ .+...+ +... ++.+
T Consensus 69 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~-----d~~~-- 139 (215)
T 2yxe_A 69 MCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDG-LVVSIERIPELAEKAERTLRKLGYDNVIVIVG-----DGTL-- 139 (215)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTS-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEES-----CGGG--
T ss_pred HHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC-----Cccc--
Confidence 3466788999999999998 5888889998876 5 99999999988877754 343221 1111 2211
Q ss_pred Hhhc-CCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMT-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~-~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+. .+.+|+|+.+..-......+.+.|+++ |+++..-
T Consensus 140 -~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~ 177 (215)
T 2yxe_A 140 -GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPV 177 (215)
T ss_dssp -CCGGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred -CCCCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEE
Confidence 111 237999998776555457888999998 9887654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0087 Score=54.04 Aligned_cols=81 Identities=22% Similarity=0.202 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-------------ChhhHHHH----HhcCCcEEE-cCCCCCCcCH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-------------NPEKFEIG----KKFGITDFI-NPATCGDKTV 262 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-------------~~~~~~~~----~~~g~~~v~-~~~~~~~~~~ 262 (390)
.|.++||+|+ +++|.+.++.+...|+ +|+++++ ++++.+.+ ...+..... ..+-.+..++
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 5789999998 9999999999999999 9999987 44444333 233433222 1111011223
Q ss_pred HHHHHhhcC--CCccEEEEcccC
Q 016363 263 SQVIKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 263 ~~~i~~~~~--~g~D~vid~~g~ 283 (390)
.+.+.+... +++|+++++.|.
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 333333222 379999999884
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0061 Score=54.98 Aligned_cols=79 Identities=15% Similarity=0.186 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHH---Hhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVI---KEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i---~~~~ 270 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+... .+ |-.+ ..++.+.+ .+..
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999999999999 9999999987765432 234332 22 2222 12222222 2222
Q ss_pred CCCccEEEEcccC
Q 016363 271 DGGADYCFECIGL 283 (390)
Q Consensus 271 ~~g~D~vid~~g~ 283 (390)
++++|++|++.|.
T Consensus 97 ~g~id~lv~nAg~ 109 (273)
T 1ae1_A 97 DGKLNILVNNAGV 109 (273)
T ss_dssp TSCCCEEEECCCC
T ss_pred CCCCcEEEECCCC
Confidence 2589999999884
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0036 Score=56.79 Aligned_cols=81 Identities=15% Similarity=0.153 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.|.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++.... +..+-.+..++.+.+.+... +++|+
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4789999998 9999999999999999 99999999988766643 443322 22111011223333333222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 83 lvnnAg~ 89 (281)
T 3zv4_A 83 LIPNAGI 89 (281)
T ss_dssp EECCCCC
T ss_pred EEECCCc
Confidence 9999884
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0042 Score=56.25 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc---CCcEEEcCCCCCCcCHHHHHHhhc--CCCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GITDFINPATCGDKTVSQVIKEMT--DGGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~---g~~~v~~~~~~~~~~~~~~i~~~~--~~g~ 274 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++ +.-..+..+-.+..++.+.+.+.. -+++
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999998 9999999999999999 9999999988765442 23 311122111101112222233221 2379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 107 D~lvnnAg~ 115 (276)
T 2b4q_A 107 DILVNNAGT 115 (276)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999883
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0047 Score=56.06 Aligned_cols=81 Identities=20% Similarity=0.206 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c---CCcEEEcCCCCCCc-CHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDK-TVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~---g~~~v~~~~~~~~~-~~~~~i~~~~~--~g 273 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ + +....+..-+..+. ++.+.+.+... ++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 99999999887665532 2 33332222121112 22222222221 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 86 iD~lvnnAg~ 95 (280)
T 3tox_A 86 LDTAFNNAGA 95 (280)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.011 Score=54.35 Aligned_cols=88 Identities=19% Similarity=0.254 Sum_probs=66.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++++ +.+.++|+... ++.+.+. ..|+|+.++
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---------~l~ell~-----~aDvV~l~~ 204 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV---------DLETLLK-----ESDVVTIHV 204 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC---------CHHHHHH-----HCSEEEECC
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc---------CHHHHHh-----hCCEEEEec
Confidence 57899999999999999999999999 99999998877 55666776321 2333333 479999888
Q ss_pred cChH----HH-HHHHHHhccCCceEEEEcc
Q 016363 282 GLTS----VM-NDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 282 g~~~----~~-~~~~~~l~~~~G~~v~~g~ 306 (390)
+... .+ ...+..|+++ ..++.++.
T Consensus 205 p~~~~t~~li~~~~l~~mk~g-a~lin~ar 233 (307)
T 1wwk_A 205 PLVESTYHLINEERLKLMKKT-AILINTSR 233 (307)
T ss_dssp CCSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred CCChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence 7432 12 3567888887 88888874
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0047 Score=55.45 Aligned_cols=80 Identities=19% Similarity=0.181 Sum_probs=54.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhc--
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMT-- 270 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~-- 270 (390)
-.+.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +.+... .+ |-.+ ..++.+.+.+..
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD--DAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 46789999998 9999999999999999 9999999988766543 234332 22 2222 122333333322
Q ss_pred CCCccEEEEcccC
Q 016363 271 DGGADYCFECIGL 283 (390)
Q Consensus 271 ~~g~D~vid~~g~ 283 (390)
-+++|++|++.|.
T Consensus 86 ~g~id~lv~nAg~ 98 (264)
T 3ucx_A 86 YGRVDVVINNAFR 98 (264)
T ss_dssp TSCCSEEEECCCS
T ss_pred cCCCcEEEECCCC
Confidence 2379999998864
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0049 Score=54.55 Aligned_cols=81 Identities=14% Similarity=0.174 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +.+... .+..+-.+..++.+.+.+.. .++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999999888999 9999999988765543 234332 22221111122333333332 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (247)
T 3lyl_A 83 IDILVNNAGI 92 (247)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0033 Score=56.87 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. ..+..+-.+..++.+.+.+... +++|+
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4678999998 9999999999999999 99999999988766543 4433 2222211011223333333222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 83 lv~~Ag~ 89 (281)
T 3m1a_A 83 LVNNAGR 89 (281)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999884
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.01 Score=52.71 Aligned_cols=80 Identities=14% Similarity=0.214 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhc--CCc-EEE--cCCCCCC-cCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKF--GIT-DFI--NPATCGD-KTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~--g~~-~v~--~~~~~~~-~~~~~~i~~~~~- 271 (390)
.+.++||+|+ |++|.+.++.+...|+++|++++++++ ..+.+.+. +.. .++ |-.+ . .++.+.+.+...
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV--PVAESKKLLKKIFDQ 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS--CHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC--ChHHHHHHHHHHHHh
Confidence 4678999998 999999999999999944888888763 34444433 222 122 2222 1 223333333222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 82 ~g~id~lv~~Ag~ 94 (254)
T 1sby_A 82 LKTVDILINGAGI 94 (254)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 379999999884
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0075 Score=53.23 Aligned_cols=39 Identities=18% Similarity=0.265 Sum_probs=33.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
..+.++||+|+ |++|.+.++.+...|+ +|+++++++++.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~ 44 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEE 44 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhc
Confidence 45789999998 9999999999999999 999999887653
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0057 Score=55.02 Aligned_cols=80 Identities=16% Similarity=0.328 Sum_probs=53.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-----hcCCcEE-E--cCCCCCCcCHHHHHHhhcC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-----KFGITDF-I--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-----~~g~~~v-~--~~~~~~~~~~~~~i~~~~~ 271 (390)
-.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+.... + |-.+ ..++.+.+.+...
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKE 95 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence 35789999998 9999999999999999 9999999987765432 2354322 2 2222 1223333332221
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 96 ~~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 96 KFGKLDTVVNAAGI 109 (267)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 379999999884
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0053 Score=55.34 Aligned_cols=81 Identities=19% Similarity=0.181 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+... ++..+-.+..++.+.+.+.. -++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 4689999998 9999999999999999 9999999987765442 234332 22222101122333333222 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 109 iD~li~~Ag~ 118 (272)
T 1yb1_A 109 VSILVNNAGV 118 (272)
T ss_dssp CSEEEECCCC
T ss_pred CcEEEECCCc
Confidence 9999999874
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0058 Score=53.72 Aligned_cols=98 Identities=16% Similarity=0.203 Sum_probs=60.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHH---HHHHhhcC-CCccEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS---QVIKEMTD-GGADYC 277 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~i~~~~~-~g~D~v 277 (390)
+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+ +....+..+-.+..++. +.+.+..+ +++|++
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l 76 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 76 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 568999998 9999999999999999 9999998876532 11112111110011122 22222222 489999
Q ss_pred EEcccC--------hH------------------HHHHHHHHhccCCceEEEEccc
Q 016363 278 FECIGL--------TS------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 278 id~~g~--------~~------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
|++.|. .. ..+.+...+++. |+++.++..
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~ 131 (236)
T 1ooe_A 77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA 131 (236)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 999883 11 123444556566 899988753
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0037 Score=55.87 Aligned_cols=81 Identities=19% Similarity=0.192 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEE-EcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF-INPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+.... +..+-.+..++.+.+.+... ++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999998888999 9999999988765443 3344322 22211011223333332222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 90 id~lv~nAg~ 99 (256)
T 3gaf_A 90 ITVLVNNAGG 99 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0049 Score=55.88 Aligned_cols=80 Identities=15% Similarity=0.180 Sum_probs=52.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEE-E--cCCCCCCcCHHHHHHhhcC-
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF-I--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v-~--~~~~~~~~~~~~~i~~~~~- 271 (390)
..++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+.... + |-.+ ..++.+.+.+...
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS--TDEVHAAVAAAVER 98 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 35789999998 9999999999889999 9999999988765442 2343322 2 2222 1223333333222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 99 ~g~id~lv~nAg~ 111 (279)
T 3sju_A 99 FGPIGILVNSAGR 111 (279)
T ss_dssp HCSCCEEEECCCC
T ss_pred cCCCcEEEECCCC
Confidence 379999999884
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0058 Score=54.22 Aligned_cols=79 Identities=15% Similarity=0.275 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE--EE--cCCCCCCcCHHHHHHhhc-CCCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD--FI--NPATCGDKTVSQVIKEMT-DGGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~--v~--~~~~~~~~~~~~~i~~~~-~~g~ 274 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... .+ |..+ ..++.+.+.+.. .+++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~i 86 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD--AEAMTAAAAEAEAVAPV 86 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC--HHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC--HHHHHHHHHHHHhhCCC
Confidence 4689999998 9999999999988999 999999998876654 3344322 22 2222 122222222211 1479
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 87 d~li~~Ag~ 95 (254)
T 2wsb_A 87 SILVNSAGI 95 (254)
T ss_dssp CEEEECCCC
T ss_pred cEEEECCcc
Confidence 999999874
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0046 Score=55.78 Aligned_cols=79 Identities=16% Similarity=0.187 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... .+ |-.+ ..++.+.+.+... +++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN--EVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC--HHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999999999999 999999998876655 3455332 22 2222 1223333332222 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++++.|.
T Consensus 87 d~lv~nAg~ 95 (271)
T 3tzq_B 87 DIVDNNAAH 95 (271)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999998884
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.011 Score=56.72 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=70.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+++|+|+|.|.+|+.+++.++..|. .|++++.++++.+.++..|...+... ..-.+.+++..-..+|+|+-++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GD-----at~~~~L~~agi~~A~~viv~~ 76 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGD-----ATRMDLLESAGAAKAEVLINAI 76 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESC-----TTCHHHHHHTTTTTCSEEEECC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcC-----CCCHHHHHhcCCCccCEEEECC
Confidence 45679999999999999999999999 99999999999999999887655432 1223345544333899999999
Q ss_pred cChHHHHH---HHHHhccCCceEEEEc
Q 016363 282 GLTSVMND---AFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~~~~---~~~~l~~~~G~~v~~g 305 (390)
+....-.. ..+.+.+. .+++.-.
T Consensus 77 ~~~~~n~~i~~~ar~~~p~-~~Iiara 102 (413)
T 3l9w_A 77 DDPQTNLQLTEMVKEHFPH-LQIIARA 102 (413)
T ss_dssp SSHHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred CChHHHHHHHHHHHHhCCC-CeEEEEE
Confidence 98663323 33444444 4565443
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0038 Score=55.71 Aligned_cols=91 Identities=16% Similarity=0.216 Sum_probs=57.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-------------------hhHHHH----HhcCCc-EEEcCCCCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFEIG----KKFGIT-DFINPATCG 258 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~~~----~~~g~~-~v~~~~~~~ 258 (390)
+.+|+|+|+|++|..+++.+...|..+++.+++.. .|.+.+ .++.+. .+......
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~- 109 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL- 109 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC-
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc-
Confidence 47899999999999999999999988999999886 565444 233332 22111110
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccC
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREG 297 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~ 297 (390)
-+ .+.+.++. .++|+||+|+++..+...+.+.....
T Consensus 110 -~~-~~~~~~~~-~~~DvVi~~~d~~~~~~~l~~~~~~~ 145 (249)
T 1jw9_B 110 -LD-DAELAALI-AEHDLVLDCTDNVAVRNQLNAGCFAA 145 (249)
T ss_dssp -CC-HHHHHHHH-HTSSEEEECCSSHHHHHHHHHHHHHH
T ss_pred -CC-HhHHHHHH-hCCCEEEEeCCCHHHHHHHHHHHHHc
Confidence 11 11222222 26999999999877444444444433
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0056 Score=54.49 Aligned_cols=80 Identities=16% Similarity=0.242 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +..+... ++..+-.+..++.+.+.+... ++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999999888999 999999998765433 2234332 222221011223333333221 37
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|.+.|
T Consensus 91 id~vi~~Ag 99 (260)
T 3awd_A 91 VDILVACAG 99 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999887
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0052 Score=55.22 Aligned_cols=79 Identities=16% Similarity=0.324 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCcE-EE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITD-FI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~~-v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.|.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ .+... .+ |-.+ ..++.+.+.+...
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE--PDAPAELARRAAEA 95 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence 4789999998 9999999999999999 99999999887654422 34332 22 2222 2333333333322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 96 ~g~id~lv~nAg~ 108 (266)
T 4egf_A 96 FGGLDVLVNNAGI 108 (266)
T ss_dssp HTSCSEEEEECCC
T ss_pred cCCCCEEEECCCc
Confidence 379999998874
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0047 Score=55.30 Aligned_cols=79 Identities=14% Similarity=0.176 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++... ..+ |-.+ ..++.+.+.+... +++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i 82 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGGL 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 4689999998 9999999999888999 9999999988766543 33322 222 2222 1223333333222 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 83 D~lv~~Ag~ 91 (260)
T 1nff_A 83 HVLVNNAGI 91 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999883
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0042 Score=54.88 Aligned_cols=81 Identities=16% Similarity=0.265 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCcE-EEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITD-FINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~~-v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
.+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+... .+..+-.+..++.+.+.+.. -+
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4678999998 9999999999888999 99999999877654432 34332 22221101122333333222 23
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 85 ~~d~vi~~Ag~ 95 (248)
T 2pnf_A 85 GIDILVNNAGI 95 (248)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.016 Score=52.62 Aligned_cols=74 Identities=19% Similarity=0.182 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcC-----CcE-EEcCCCCCCcCHHHHHHhhcCCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFG-----ITD-FINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g-----~~~-v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
-.+.++||+|+|++|.+++..+...|+++|+++.|++++.+.+ ++++ ... ..+. .++.+.+. .
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~-----~~l~~~l~-----~ 194 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA-----RGIEDVIA-----A 194 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS-----TTHHHHHH-----H
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH-----HHHHHHHh-----c
Confidence 4688999999999999999999999997899999999887655 3332 121 2222 24544443 4
Q ss_pred ccEEEEcccCh
Q 016363 274 ADYCFECIGLT 284 (390)
Q Consensus 274 ~D~vid~~g~~ 284 (390)
+|+||+|++..
T Consensus 195 ~DiVInaTp~G 205 (283)
T 3jyo_A 195 ADGVVNATPMG 205 (283)
T ss_dssp SSEEEECSSTT
T ss_pred CCEEEECCCCC
Confidence 89999998743
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0048 Score=55.13 Aligned_cols=81 Identities=26% Similarity=0.321 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++... ++..+-.+..++.+.+.+... +++|+
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 4689999998 9999999999999999 999999998776544 3455432 222211011223333332221 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 90 li~~Ag~ 96 (265)
T 2o23_A 90 AVNCAGI 96 (265)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9998873
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.003 Score=55.72 Aligned_cols=104 Identities=13% Similarity=0.101 Sum_probs=69.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
......++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 54 ~l~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~~~~~~ 129 (239)
T 2hnk_A 54 ILTKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL---GSALETLQVLI 129 (239)
T ss_dssp HHHHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHH
T ss_pred HHHHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---CCHHHHHHHHH
Confidence 34456678999999987 5888889999874 2399999999998877755 34321011111 23444443331
Q ss_pred --------------C-CCccEEEEcccCh---HHHHHHHHHhccCCceEEEE
Q 016363 271 --------------D-GGADYCFECIGLT---SVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 271 --------------~-~g~D~vid~~g~~---~~~~~~~~~l~~~~G~~v~~ 304 (390)
+ +.+|+|+...... ..++.+.+.|+++ |.++..
T Consensus 130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~ 180 (239)
T 2hnk_A 130 DSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIAD 180 (239)
T ss_dssp HCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred hhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 2 5799999765544 3457888999998 998864
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0056 Score=54.83 Aligned_cols=79 Identities=23% Similarity=0.366 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+... .+ |-.+ ..++.+.+.+...
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF 82 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence 4789999998 9999999999999999 9999999987765442 224332 22 2222 1223233332222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 83 g~id~lv~nAg~ 94 (262)
T 1zem_A 83 GKIDFLFNNAGY 94 (262)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.013 Score=52.11 Aligned_cols=75 Identities=17% Similarity=0.139 Sum_probs=52.5
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
...+.++||+|+ |++|.+.++.+...|+ +|++++++++.. ++++...++ -+. ..++.+.+.+.. ++|++|
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~--~D~-~~~~~~~~~~~~--~iD~lv 86 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV--CDL-RKDLDLLFEKVK--EVDILV 86 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE--CCT-TTCHHHHHHHSC--CCSEEE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH---HhhCCeEEE--eeH-HHHHHHHHHHhc--CCCEEE
Confidence 446889999998 9999999999989999 999999987443 344422222 221 134444444332 799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 87 ~~Ag~ 91 (249)
T 1o5i_A 87 LNAGG 91 (249)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99874
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.006 Score=54.46 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=36.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~ 47 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET 47 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence 4679999998 9999999998888999 999999998876654
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0072 Score=54.00 Aligned_cols=81 Identities=16% Similarity=0.272 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HHHHH-hc----CCcE-EEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIGK-KF----GITD-FINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~-~~----g~~~-v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+. ++ +... .+..+-.+..++.+.+.+...
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4678999998 9999999999999999 99999998776 54432 22 4332 222111011223333332222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 82 g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 82 GRIDILVNNAGI 93 (260)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999873
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0021 Score=57.95 Aligned_cols=80 Identities=16% Similarity=0.132 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~vi 278 (390)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+..-.. ..+..+-.+..++.+.+.+... +++|++|
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 92 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKIYGPADAIV 92 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 4689999998 9999999999999999 99999998877654432111 2221111011223333333222 3799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 93 nnAg~ 97 (266)
T 3p19_A 93 NNAGM 97 (266)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99884
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.005 Score=53.57 Aligned_cols=96 Identities=18% Similarity=0.230 Sum_probs=61.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.+|||+|+ |.+|...++.+...|. +|+++++++++.+.+. ..-.++..+- .+ .+.+.+... ++|+||.++|
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~Dl---~d-~~~~~~~~~-~~d~vi~~a~ 76 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN--EHLKVKKADV---SS-LDEVCEVCK-GADAVISAFN 76 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC--TTEEEECCCT---TC-HHHHHHHHT-TCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc--CceEEEEecC---CC-HHHHHHHhc-CCCEEEEeCc
Confidence 58999998 9999999999999998 9999999987653321 1112222211 11 233333333 6999999988
Q ss_pred ChH-----------HHHHHHHHhccCC-ceEEEEccc
Q 016363 283 LTS-----------VMNDAFNSSREGW-GKTVILGVE 307 (390)
Q Consensus 283 ~~~-----------~~~~~~~~l~~~~-G~~v~~g~~ 307 (390)
... ....+++.++..+ .+++.++..
T Consensus 77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 113 (227)
T 3dhn_A 77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA 113 (227)
T ss_dssp C------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence 641 2344555555541 478887743
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0058 Score=54.49 Aligned_cols=80 Identities=15% Similarity=0.129 Sum_probs=51.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhc--CCCc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--DGGA 274 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g~ 274 (390)
+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+... .+..+-.+..++.+.+.+.. -+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 568999998 9999999999999999 9999999987765442 234332 22211101122333333221 2379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 81 d~lv~nAg~ 89 (256)
T 1geg_A 81 DVIVNNAGV 89 (256)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999873
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.006 Score=54.74 Aligned_cols=79 Identities=15% Similarity=0.081 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCc--EEE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT--DFI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~--~v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ .+.. ..+ |-.+ ..++.+.+.+...
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD--ALQVRAFAEACER 83 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC--HHHHHHHHHHHHH
Confidence 4789999998 9999999999999999 99999999887654422 3322 222 2222 1222222332222
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 84 ~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 84 TLGCASILVNNAGQ 97 (265)
T ss_dssp HHCSCSEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 379999999984
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0069 Score=54.79 Aligned_cols=78 Identities=18% Similarity=0.290 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcE-EEcCCCCCCcCHHHHHHhhcC-CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-FINPATCGDKTVSQVIKEMTD-GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~i~~~~~-~g~D~v 277 (390)
.|.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +++... ++..+-.+..++.+.+.+... ++.|++
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 4789999998 9999999999989999 9999999998876654 455432 222221112233344444411 279999
Q ss_pred EEc
Q 016363 278 FEC 280 (390)
Q Consensus 278 id~ 280 (390)
|.+
T Consensus 108 v~~ 110 (281)
T 3ppi_A 108 VVA 110 (281)
T ss_dssp EEC
T ss_pred EEc
Confidence 988
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.011 Score=54.53 Aligned_cols=99 Identities=12% Similarity=0.202 Sum_probs=70.2
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CCc---EEEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~~---~v~~~~~~~~~~~~~~i 266 (390)
+.+..+++++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++. |.. .++. . ++.
T Consensus 82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-~-----d~~--- 150 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL-Q-----GWE--- 150 (318)
T ss_dssp HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE-S-----CGG---
T ss_pred HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-C-----ChH---
Confidence 34556788999999999976 8888888887788 999999999988877653 321 2221 1 221
Q ss_pred HhhcCCCccEEEEc-----ccC---hHHHHHHHHHhccCCceEEEEcc
Q 016363 267 KEMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 267 ~~~~~~g~D~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
++ ++.+|+|+.. ++. ...+..+.+.|+++ |+++....
T Consensus 151 -~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 195 (318)
T 2fk8_A 151 -DF-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSS 195 (318)
T ss_dssp -GC-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred -HC-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 11 2579999875 332 23467788999999 99887653
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0069 Score=55.40 Aligned_cols=100 Identities=15% Similarity=0.238 Sum_probs=71.7
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i 266 (390)
+.+..+++++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++ .|.. .++. . ++.
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~-~-----d~~--- 132 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI-Q-----GWE--- 132 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE-C-----CGG---
T ss_pred HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-C-----CHH---
Confidence 44667789999999999975 8888899998887 99999999998877754 3432 1222 1 221
Q ss_pred HhhcCCCccEEEEcccC---------------hHHHHHHHHHhccCCceEEEEccc
Q 016363 267 KEMTDGGADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++ ++.+|+|+....- ...+..+.+.|+++ |+++.....
T Consensus 133 -~~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~ 185 (302)
T 3hem_A 133 -EF-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTIT 185 (302)
T ss_dssp -GC-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEE
T ss_pred -Hc-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEe
Confidence 22 4589999864221 23467888999999 999877643
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0038 Score=55.78 Aligned_cols=81 Identities=19% Similarity=0.310 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ ++++.. ..+..+-.+..++.+.+.+... +++|+
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 9999999999999999 999999998776544 334432 2222111011223333333222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 85 lv~nAg~ 91 (257)
T 3tpc_A 85 LVNCAGT 91 (257)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999884
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0083 Score=53.44 Aligned_cols=78 Identities=17% Similarity=0.295 Sum_probs=50.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEecCChhhHHHHHh-cCCcEE-E--cCCCCCCcCHHHHHHhhcC--CC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPEKFEIGKK-FGITDF-I--NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g--~~~Vi~~~~~~~~~~~~~~-~g~~~v-~--~~~~~~~~~~~~~i~~~~~--~g 273 (390)
|+++||+|+ +++|.+.++.+...| + +|+.+++++++.+.+.+ ++.... + |-.+ ..++.+.+.+... ++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITE--DSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTS--HHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence 578999998 999999887766664 6 89999999888766543 443322 2 2222 1223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 79 id~lvnnAg~ 88 (254)
T 3kzv_A 79 IDSLVANAGV 88 (254)
T ss_dssp CCEEEEECCC
T ss_pred ccEEEECCcc
Confidence 9999998885
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0054 Score=56.06 Aligned_cols=80 Identities=14% Similarity=0.113 Sum_probs=51.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCC-c-EEE--cCCCCCC-cCHHHHHHhhc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGI-T-DFI--NPATCGD-KTVSQVIKEMT 270 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~-~-~v~--~~~~~~~-~~~~~~i~~~~ 270 (390)
..+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+. . .++ |-.+ . ..+.+.+..+.
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~v~~~~~~~~ 86 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD--PIATMSSLADFIK 86 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS--CHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC--cHHHHHHHHHHHH
Confidence 35789999998 9999999999888999 999999998875443 22232 2 222 2222 1 11222222221
Q ss_pred C--CCccEEEEcccC
Q 016363 271 D--GGADYCFECIGL 283 (390)
Q Consensus 271 ~--~g~D~vid~~g~ 283 (390)
. +++|++|++.|.
T Consensus 87 ~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 87 THFGKLDILVNNAGV 101 (311)
T ss_dssp HHHSSCCEEEECCCC
T ss_pred HhCCCCCEEEECCcc
Confidence 1 379999999985
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0021 Score=57.04 Aligned_cols=74 Identities=11% Similarity=0.183 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHH-----hhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIK-----EMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~-----~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+.. |. +|+++++++++.+.+.+......+.. ++.+... +... ++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~------D~~~~~~~~~~~~~~~~~~~ 75 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES------DIVKEVLEEGGVDKLKNLDH 75 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC------CHHHHHHTSSSCGGGTTCSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec------ccchHHHHHHHHHHHHhcCC
Confidence 3688999998 9999998887655 87 89999999988887766432222221 2222211 1112 27
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 76 id~lv~~Ag~ 85 (245)
T 3e9n_A 76 VDTLVHAAAV 85 (245)
T ss_dssp CSEEEECC--
T ss_pred CCEEEECCCc
Confidence 9999999885
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.013 Score=54.11 Aligned_cols=89 Identities=18% Similarity=0.215 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
-.|.+|.|+|.|.+|...++.++..|+ +|++.++++++. .+.++|+.. .++.+.+. ..|+|+.+
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~---------~~l~ell~-----~aDvVvl~ 203 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA---------VSLEELLK-----NSDVISLH 203 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE---------CCHHHHHH-----HCSEEEEC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee---------cCHHHHHh-----hCCEEEEe
Confidence 357899999999999999999999999 999999988765 456677542 12333333 47999988
Q ss_pred ccChHH----H-HHHHHHhccCCceEEEEcc
Q 016363 281 IGLTSV----M-NDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 281 ~g~~~~----~-~~~~~~l~~~~G~~v~~g~ 306 (390)
++.... + ...+..|+++ +.++.++.
T Consensus 204 ~P~~~~t~~li~~~~l~~mk~g-a~lIn~ar 233 (313)
T 2ekl_A 204 VTVSKDAKPIIDYPQFELMKDN-VIIVNTSR 233 (313)
T ss_dssp CCCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred ccCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence 874331 2 4567788887 88887764
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.024 Score=51.41 Aligned_cols=87 Identities=20% Similarity=0.236 Sum_probs=62.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-|++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDvvi~~vp~ 67 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA--------ATPCEVVE-----SCPVTFAMLAD 67 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECCSS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEEcCC
Confidence 479999999999999999988998 99999999999998887765321 23444443 36888888886
Q ss_pred hHHHHHHH-------HHhccCCceEEEEc
Q 016363 284 TSVMNDAF-------NSSREGWGKTVILG 305 (390)
Q Consensus 284 ~~~~~~~~-------~~l~~~~G~~v~~g 305 (390)
+......+ ..++++ ..++.++
T Consensus 68 ~~~~~~v~~~~~~l~~~l~~~-~~vi~~s 95 (287)
T 3pef_A 68 PAAAEEVCFGKHGVLEGIGEG-RGYVDMS 95 (287)
T ss_dssp HHHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred HHHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence 54454444 445554 4555443
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0038 Score=54.92 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=63.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+|||+|+ |.+|.+.++.+...| + +|+++++++++.+.+..-+.. ++..+- .+ .+.+.++.. ++|+||.+.
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~~Dl---~d-~~~~~~~~~-~~D~vv~~a 96 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIMGDV---LN-HAALKQAMQ-GQDIVYANL 96 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEECCT---TC-HHHHHHHHT-TCSEEEEEC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcE-EEEecC---CC-HHHHHHHhc-CCCEEEEcC
Confidence 57999998 999999999999999 7 999999998775443222222 221111 11 223333332 689999988
Q ss_pred cChH---HHHHHHHHhccCC-ceEEEEccc
Q 016363 282 GLTS---VMNDAFNSSREGW-GKTVILGVE 307 (390)
Q Consensus 282 g~~~---~~~~~~~~l~~~~-G~~v~~g~~ 307 (390)
+... ..+.+++.++..+ ++||.++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~ 126 (236)
T 3qvo_A 97 TGEDLDIQANSVIAAMKACDVKRLIFVLSL 126 (236)
T ss_dssp CSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence 8643 2344556665532 688888753
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0073 Score=54.49 Aligned_cols=81 Identities=17% Similarity=0.244 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEEcCCCCC-CcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCG-DKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~~~~~~~-~~~~~~~i~~~~--~~g 273 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +..+....+..-|.. ..++.+.+.+.. .++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 5789999998 9999999999999999 999999998876544 233544332221211 122223333222 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 104 iD~lv~nAg~ 113 (271)
T 4ibo_A 104 VDILVNNAGI 113 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0072 Score=54.58 Aligned_cols=80 Identities=18% Similarity=0.188 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---cCCcE-EEcCCCCCCcCHHHHHHhhc--CCCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-FINPATCGDKTVSQVIKEMT--DGGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g~ 274 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++++...+..++ .+... .+..+- .+.+-.+.+.+.. .+++
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADL-ADLEGAANVAEELAATRRV 107 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCT-TCHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHhcCCC
Confidence 5789999998 9999999999999999 99999976544444433 33322 221111 1122222222211 1479
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 108 D~lv~nAg~ 116 (273)
T 3uf0_A 108 DVLVNNAGI 116 (273)
T ss_dssp CEEEECCCC
T ss_pred cEEEECCCC
Confidence 999999884
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0039 Score=57.75 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC--c-EEEcCCCCCCcCHHHHHHhhc--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--T-DFINPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~--~-~v~~~~~~~~~~~~~~i~~~~--~ 271 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+. . .++..+-.+..++.+.+.+.. -
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 5789999998 9999999999999999 99999999987665432 232 2 222211101122333333322 2
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999999983
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0055 Score=55.29 Aligned_cols=79 Identities=16% Similarity=0.164 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+.. ..+ |-.+ ..++.+.+.+...
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND--ATAVDALVESTLKEF 103 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999999999999 9999999988765442 23432 222 2222 1223333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 104 g~iD~lvnnAg~ 115 (270)
T 3ftp_A 104 GALNVLVNNAGI 115 (270)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999883
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0071 Score=55.21 Aligned_cols=80 Identities=13% Similarity=0.096 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCcE-EEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITD-FINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~~-v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ + +... ++..+-.+..++.+.+.+.. .+
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 9999999999999999 99999999877654322 2 4332 22211101122333333221 23
Q ss_pred CccEEEEccc
Q 016363 273 GADYCFECIG 282 (390)
Q Consensus 273 g~D~vid~~g 282 (390)
.+|++|++.|
T Consensus 104 ~id~li~~Ag 113 (302)
T 1w6u_A 104 HPNIVINNAA 113 (302)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999988
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=96.51 E-value=0.007 Score=54.15 Aligned_cols=81 Identities=19% Similarity=0.074 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHh---hcCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKE---MTDG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~---~~~~ 272 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+... .+..+-.+..++.+.+.+ ...+
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999999999999 9999999987765432 234332 222111011122222222 2225
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 92 ~id~li~~Ag~ 102 (266)
T 1xq1_A 92 KLDILINNLGA 102 (266)
T ss_dssp CCSEEEEECCC
T ss_pred CCcEEEECCCC
Confidence 79999998884
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0052 Score=54.20 Aligned_cols=80 Identities=16% Similarity=0.258 Sum_probs=53.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEecCChhhHHHHHhc-CCc-EEEcCCCCCCcCHHHHHHh---hcCC-C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPEKFEIGKKF-GIT-DFINPATCGDKTVSQVIKE---MTDG-G 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g--~~~Vi~~~~~~~~~~~~~~~-g~~-~v~~~~~~~~~~~~~~i~~---~~~~-g 273 (390)
+.+|||+|+ |++|.+.++.+...| + +|+++++++++.+.+.++ +.. .++..+-.+...+.+.+.+ ..+. +
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 578999998 999999999998899 7 999999999888777665 322 2222111011222222222 2222 6
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 82 id~li~~Ag~ 91 (250)
T 1yo6_A 82 LSLLINNAGV 91 (250)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCcc
Confidence 9999998873
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0028 Score=56.31 Aligned_cols=75 Identities=17% Similarity=0.199 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~vi 278 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. + ...|-.+ ..++.+.+.+... +++|++|
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~--~~~~~~~~~~~~~~~g~id~lv 86 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV 86 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence 4688999998 9999999999989999 9999998876543322 1 2223322 1223333332221 3799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 87 ~~Ag~ 91 (247)
T 1uzm_A 87 SNAGL 91 (247)
T ss_dssp EECSC
T ss_pred ECCCC
Confidence 98884
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.005 Score=54.61 Aligned_cols=81 Identities=17% Similarity=0.167 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +..+... .+..+-.+..++.+.+.+... ++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4688999998 9999999999888999 999999998775543 2234332 222111011223333332211 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 89 ~d~vi~~Ag~ 98 (255)
T 1fmc_A 89 VDILVNNAGG 98 (255)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998874
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0085 Score=54.32 Aligned_cols=81 Identities=20% Similarity=0.255 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHHH----hc-CCcEE-EcCCCCCCcCHHHHHHhhc--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGK----KF-GITDF-INPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~----~~-g~~~v-~~~~~~~~~~~~~~i~~~~--~ 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+. .. +.... +..+-.+..++.+.+.+.. -
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 4689999998 9999999999999999 9999998 555544332 22 33222 2111101122333333222 1
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 103 g~iD~lv~nAg~ 114 (281)
T 3v2h_A 103 GGADILVNNAGV 114 (281)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999885
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.018 Score=50.20 Aligned_cols=115 Identities=12% Similarity=0.081 Sum_probs=69.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.|.+|||+|+|.+|...++.+...|+ +|+++++... .++.+.+-+.-..+. ..+.+.+ -.++|+||-+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~-~~~~~~d---------L~~adLVIaA 98 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKR-KKVGEED---------LLNVFFIVVA 98 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEEC-SCCCGGG---------SSSCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEE-CCCCHhH---------hCCCCEEEEC
Confidence 47889999999999999999999999 8888886543 233333333222332 2211111 1279999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeee
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (390)
++.+. .+..+...+.. |..|.+........+.++.. +.+ .+.+-=+.
T Consensus 99 T~d~~-~N~~I~~~ak~-gi~VNvvD~p~~~~f~~Pai-v~rg~l~iaIST 146 (223)
T 3dfz_A 99 TNDQA-VNKFVKQHIKN-DQLVNMASSFSDGNIQIPAQ-FSRGRLSLAIST 146 (223)
T ss_dssp CCCTH-HHHHHHHHSCT-TCEEEC-----CCSEECCEE-EEETTEEEEEEC
T ss_pred CCCHH-HHHHHHHHHhC-CCEEEEeCCcccCeEEEeeE-EEeCCEEEEEEC
Confidence 99887 66655555556 88887765433333333322 233 45544343
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0069 Score=53.84 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=52.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcE-EEcCCCCCCcCHHHHHHhhcCC--CccEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-FINPATCGDKTVSQVIKEMTDG--GADYCF 278 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~i~~~~~~--g~D~vi 278 (390)
.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++... .+..+-.+..++.+.+.+.... ++|++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 79 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV 79 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 36899998 9999999999989999 9999999988776553 344322 2222110112333344433332 799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 80 nnAg~ 84 (248)
T 3asu_A 80 NNAGL 84 (248)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 98874
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0061 Score=54.00 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH----HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+ +..+... .+ |-.+ ..++.+.+.+...
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN--AEDVTNMVKQTVDV 79 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4678999998 9999999999999999 9999988 77665443 2234332 22 2222 1223333332222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 80 ~g~id~lv~nAg~ 92 (246)
T 2uvd_A 80 FGQVDILVNNAGV 92 (246)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 379999999884
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0066 Score=54.77 Aligned_cols=80 Identities=21% Similarity=0.250 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. ..+... .+..+-.+..++.+.+.+... ++
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 9999999998888899 9999998876654432 234332 222211011223333333221 36
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|++.|
T Consensus 112 id~li~~Ag 120 (279)
T 3ctm_A 112 IDVFVANAG 120 (279)
T ss_dssp CSEEEECGG
T ss_pred CCEEEECCc
Confidence 999999887
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0072 Score=54.46 Aligned_cols=79 Identities=9% Similarity=0.019 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHHH-hc----CCcE-EE--cCCCCCC----cCHHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGK-KF----GITD-FI--NPATCGD----KTVSQVIK 267 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~-~~----g~~~-v~--~~~~~~~----~~~~~~i~ 267 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+. ++ +... .+ |-.+ . .++.+.+.
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL--SSSLLDCCEDIID 86 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS--STTHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC--ccccHHHHHHHHH
Confidence 4678999998 9999999999989999 9999999 877655442 22 4332 22 2222 2 22222222
Q ss_pred hhcC--CCccEEEEcccC
Q 016363 268 EMTD--GGADYCFECIGL 283 (390)
Q Consensus 268 ~~~~--~g~D~vid~~g~ 283 (390)
+... +++|++|++.|.
T Consensus 87 ~~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 2221 379999999883
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0097 Score=53.14 Aligned_cols=80 Identities=11% Similarity=0.108 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhc---CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT---DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~---~~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+... .+..+-.+..++.+.+.+.. .+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999998 9999999999999999 9999999987765442 224322 22111101122333333321 35
Q ss_pred CccEEEEccc
Q 016363 273 GADYCFECIG 282 (390)
Q Consensus 273 g~D~vid~~g 282 (390)
++|+++++.|
T Consensus 83 ~id~lvnnAg 92 (260)
T 2qq5_A 83 RLDVLVNNAY 92 (260)
T ss_dssp CCCEEEECCC
T ss_pred CceEEEECCc
Confidence 7999999984
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0066 Score=54.22 Aligned_cols=81 Identities=12% Similarity=0.140 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +..+... .+..+-.+..++.+.+.+... ++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 999999998776543 2234332 221111011223233332221 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 92 iD~lv~~Ag~ 101 (260)
T 2zat_A 92 VDILVSNAAV 101 (260)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999873
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0085 Score=58.61 Aligned_cols=92 Identities=21% Similarity=0.194 Sum_probs=69.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.-.|.+|+|+|.|.+|..+++.++.+|+ +|++.++++.+.......|... .++.+.+ ...|+|+-
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~---------~~l~ell-----~~aDiVi~ 338 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV---------VTMEYAA-----DKADIFVT 338 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE---------CCHHHHT-----TTCSEEEE
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe---------CCHHHHH-----hcCCEEEE
Confidence 3578999999999999999999999999 9999999988754444455431 1233332 25899999
Q ss_pred cccChHHH-HHHHHHhccCCceEEEEccc
Q 016363 280 CIGLTSVM-NDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 280 ~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 307 (390)
++++...+ ...++.|+++ ..++.+|..
T Consensus 339 ~~~t~~lI~~~~l~~MK~g-AilINvgrg 366 (494)
T 3d64_A 339 ATGNYHVINHDHMKAMRHN-AIVCNIGHF 366 (494)
T ss_dssp CSSSSCSBCHHHHHHCCTT-EEEEECSSS
T ss_pred CCCcccccCHHHHhhCCCC-cEEEEcCCC
Confidence 98765534 4678899988 888888853
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0056 Score=52.17 Aligned_cols=97 Identities=13% Similarity=0.138 Sum_probs=60.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.+|||+|+ |.+|...++.+...|. +|+++++++++.+.....+. .++..+- .+ .+.+.+... ++|+||.+.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~---~~-~~~~~~~~~-~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDV---LQ-AADVDKTVA-GQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCT---TS-HHHHHHHHT-TCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCce-EEEEecC---CC-HHHHHHHHc-CCCEEEECcc
Confidence 68999998 9999999999988898 99999999876533211122 2222211 11 223333332 6899999988
Q ss_pred ChH----------HHHHHHHHhccC-CceEEEEccc
Q 016363 283 LTS----------VMNDAFNSSREG-WGKTVILGVE 307 (390)
Q Consensus 283 ~~~----------~~~~~~~~l~~~-~G~~v~~g~~ 307 (390)
... ....+++.+... -++++.++..
T Consensus 77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 532 133444444432 1578877743
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0093 Score=56.31 Aligned_cols=92 Identities=16% Similarity=0.137 Sum_probs=66.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
-+|+|+|+|.+|..+++.+.. .. .|.+.+++.++.+.+++......+|..+ .+.+.++.. +.|+|++|++.
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d------~~~l~~~~~-~~DvVi~~~p~ 87 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN------FDKLVEVMK-EFELVIGALPG 87 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC------HHHHHHHHT-TCSEEEECCCG
T ss_pred cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC------HHHHHHHHh-CCCEEEEecCC
Confidence 469999999999998887754 35 8899999999988887654333344333 233444333 68999999997
Q ss_pred hHHHHHHHHHhccCCceEEEEc
Q 016363 284 TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 284 ~~~~~~~~~~l~~~~G~~v~~g 305 (390)
......+-.|+..+ -.++.+.
T Consensus 88 ~~~~~v~~~~~~~g-~~yvD~s 108 (365)
T 3abi_A 88 FLGFKSIKAAIKSK-VDMVDVS 108 (365)
T ss_dssp GGHHHHHHHHHHHT-CEEEECC
T ss_pred cccchHHHHHHhcC-cceEeee
Confidence 76566677777776 7787765
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0065 Score=56.97 Aligned_cols=79 Identities=22% Similarity=0.252 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-----------HHHHHhcCCcEE-E--cCCCCCCcCHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-----------FEIGKKFGITDF-I--NPATCGDKTVSQVI 266 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-----------~~~~~~~g~~~v-~--~~~~~~~~~~~~~i 266 (390)
.|.++||+|+ +++|.+.++.+...|+ +|+++++++++ .+.++..+.... + |-.+ ..++.+.+
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~ 120 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD--EQQISAAV 120 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHH
Confidence 5789999998 9999999999999999 99999988764 233344454322 2 2222 12233333
Q ss_pred HhhcC--CCccEEEEcccC
Q 016363 267 KEMTD--GGADYCFECIGL 283 (390)
Q Consensus 267 ~~~~~--~g~D~vid~~g~ 283 (390)
.+... +++|++|++.|.
T Consensus 121 ~~~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 33322 379999999984
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0054 Score=54.89 Aligned_cols=82 Identities=12% Similarity=0.161 Sum_probs=53.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcC---CCeEEEecCChhhHHHHHhc---CCc-EEEcCCCCCCcCHHHHHHhh---
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNR---ASKIIGVDINPEKFEIGKKF---GIT-DFINPATCGDKTVSQVIKEM--- 269 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g---~~~Vi~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~i~~~--- 269 (390)
.++.++||+|+ |.+|.+.++.+...| + +|+++++++++.+.++++ +.. .++..+-.+..++.+.+.+.
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence 45678999998 999999999998889 7 999999998765544432 322 22221111123343333332
Q ss_pred cCC-CccEEEEcccC
Q 016363 270 TDG-GADYCFECIGL 283 (390)
Q Consensus 270 ~~~-g~D~vid~~g~ 283 (390)
.+. ++|++|.++|.
T Consensus 98 ~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 98 TKDQGLNVLFNNAGI 112 (267)
T ss_dssp HGGGCCSEEEECCCC
T ss_pred cCCCCccEEEECCCc
Confidence 232 69999999873
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0089 Score=54.61 Aligned_cols=80 Identities=14% Similarity=0.159 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---------cCCcE-EEcCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---------FGITD-FINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---------~g~~~-v~~~~~~~~~~~~~~i~~~~ 270 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+... .+..+-.+..++.+.+.+..
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 4689999998 9999999999989999 99999999877654321 13222 22111101122333333322
Q ss_pred C--CCccEEEEccc
Q 016363 271 D--GGADYCFECIG 282 (390)
Q Consensus 271 ~--~g~D~vid~~g 282 (390)
. +++|++|++.|
T Consensus 96 ~~~g~id~li~~Ag 109 (303)
T 1yxm_A 96 DTFGKINFLVNNGG 109 (303)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1 37999999988
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0043 Score=54.97 Aligned_cols=74 Identities=7% Similarity=-0.031 Sum_probs=51.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-c--CChhhHHHHH-hc-CCcEEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-D--INPEKFEIGK-KF-GITDFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~--~~~~~~~~~~-~~-g~~~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
+.++||+|+ |++|.+.++.+...|+ +|+++ + +++++.+.+. ++ +. .+.+. .++.+.+.+... +++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~-----~~v~~~~~~~~~~~g~i 73 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAE-----QKPERLVDATLQHGEAI 73 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCC-----CCGGGHHHHHGGGSSCE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCH-----HHHHHHHHHHHHHcCCC
Confidence 468999998 9999999999999999 99999 6 8888776553 34 32 23322 234344443332 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 74 D~lv~~Ag~ 82 (244)
T 1zmo_A 74 DTIVSNDYI 82 (244)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999873
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0055 Score=55.48 Aligned_cols=81 Identities=20% Similarity=0.293 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCC---cE-EEcCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGI---TD-FINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~---~~-v~~~~~~~~~~~~~~i~~~~~- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++.+. .. .+..+-.+..++.+.+.+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 999999998876544 23333 21 221111011223333333222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 379999999985
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0066 Score=54.56 Aligned_cols=79 Identities=16% Similarity=0.103 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcC--CcE-EEcCCCCCCcCHHHHHHhhcCCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFG--ITD-FINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g--~~~-v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+ ... .+..+- .+.+..+.+.+. -++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-~~~~~~~~~~~~-~g~ 85 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADL-GTEQGCQDVIEK-YPK 85 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-TSHHHHHHHHHH-CCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-CCHHHHHHHHHh-cCC
Confidence 4788999998 9999999999999999 9999999987765432 222 221 121111 112222222222 137
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 86 id~lv~nAg~ 95 (267)
T 3t4x_A 86 VDILINNLGI 95 (267)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0075 Score=53.30 Aligned_cols=80 Identities=16% Similarity=0.239 Sum_probs=51.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc----CCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+.++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. ++ +.. .++..+-.+..++.+.+.+... ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 578999998 9999999999888999 9999999988766543 22 322 2222111011223333332222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 81 id~li~~Ag~ 90 (250)
T 2cfc_A 81 IDVLVNNAGI 90 (250)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998873
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0051 Score=54.60 Aligned_cols=81 Identities=23% Similarity=0.239 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |.+|...++.+...|+ +|++++++ +++.+.+. ..+... ++..+-.+..++.+.+.+... +
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999888999 99999998 66654432 224322 222111011223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 85 ~id~vi~~Ag~ 95 (258)
T 3afn_B 85 GIDVLINNAGG 95 (258)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.027 Score=51.76 Aligned_cols=75 Identities=19% Similarity=0.180 Sum_probs=57.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
-.+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-|++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~~~~~-----~aDvvi~~vp 86 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC--------ESPAEVIK-----KCKYTIAMLS 86 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECCS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc--------CCHHHHHH-----hCCEEEEEcC
Confidence 3589999999999999999999999 99999999999998888775321 23444443 3688888887
Q ss_pred ChHHHHHHH
Q 016363 283 LTSVMNDAF 291 (390)
Q Consensus 283 ~~~~~~~~~ 291 (390)
.+......+
T Consensus 87 ~~~~~~~v~ 95 (310)
T 3doj_A 87 DPCAALSVV 95 (310)
T ss_dssp SHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 765455444
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.028 Score=51.20 Aligned_cols=86 Identities=15% Similarity=0.221 Sum_probs=62.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|... . .++.+.+. ++|+||.|++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~-----~~~~~~~~-----~~D~vi~~v~~~ 72 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A-----STAKAIAE-----QCDVIITMLPNS 72 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C-----SSHHHHHH-----HCSEEEECCSSH
T ss_pred eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c-----CCHHHHHh-----CCCEEEEECCCH
Confidence 79999999999999988888898 8999999999988887766421 1 23444443 479999999876
Q ss_pred HHHHHHH-------HHhccCCceEEEEc
Q 016363 285 SVMNDAF-------NSSREGWGKTVILG 305 (390)
Q Consensus 285 ~~~~~~~-------~~l~~~~G~~v~~g 305 (390)
......+ ..++++ ..++.++
T Consensus 73 ~~~~~~~~~~~~l~~~l~~~-~~vv~~s 99 (299)
T 1vpd_A 73 PHVKEVALGENGIIEGAKPG-TVLIDMS 99 (299)
T ss_dssp HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred HHHHHHHhCcchHhhcCCCC-CEEEECC
Confidence 5455444 445555 5565554
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0081 Score=54.32 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-h----cCCcE-EE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K----FGITD-FI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~----~g~~~-v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.|.++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+. + .+... .+ |-.+ ..++.+.+.+...
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA--PPAVMAAVDQALKE 102 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 9999999987654432 2 24332 22 2222 1223333333222
Q ss_pred -CCccEEEEccc
Q 016363 272 -GGADYCFECIG 282 (390)
Q Consensus 272 -~g~D~vid~~g 282 (390)
+++|+++++.|
T Consensus 103 ~g~id~lv~nAg 114 (277)
T 4fc7_A 103 FGRIDILINCAA 114 (277)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 37999999998
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0084 Score=53.51 Aligned_cols=80 Identities=16% Similarity=0.227 Sum_probs=50.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--HHHH-Hh---cCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIG-KK---FGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~-~~---~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+.++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+ ++ .+... .+..+-.+..++.+.+.+... +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG 80 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 578999998 9999999998888899 99999998776 4433 22 24332 221111011223333332221 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 81 ~iD~lv~nAg~ 91 (258)
T 3a28_C 81 GFDVLVNNAGI 91 (258)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.014 Score=52.70 Aligned_cols=91 Identities=9% Similarity=-0.018 Sum_probs=61.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCC--cEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--TDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~--~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.+.+++|+|+|++|.+++..+...|+++|+++.|++++.+.+ ++++. -.++...+ + ....+|+||
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~-----l-------~~~~~DivI 186 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA-----L-------EGQSFDIVV 186 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG-----G-------TTCCCSEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH-----h-------cccCCCEEE
Confidence 588999999999999999988899977999999999887655 44543 22332221 1 113799999
Q ss_pred EcccChHHHH---HHHHHhccCCceEEEEc
Q 016363 279 ECIGLTSVMN---DAFNSSREGWGKTVILG 305 (390)
Q Consensus 279 d~~g~~~~~~---~~~~~l~~~~G~~v~~g 305 (390)
++++....-. .....++++ ..++++.
T Consensus 187 naTp~gm~~~~~~i~~~~l~~~-~~V~Dlv 215 (272)
T 3pwz_A 187 NATSASLTADLPPLPADVLGEA-ALAYELA 215 (272)
T ss_dssp ECSSGGGGTCCCCCCGGGGTTC-SEEEESS
T ss_pred ECCCCCCCCCCCCCCHHHhCcC-CEEEEee
Confidence 9988543110 112345555 5555554
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0093 Score=53.64 Aligned_cols=81 Identities=21% Similarity=0.279 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCC--c-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--T-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~--~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ .+++. . .++..+-.+..++.+.+.+... +++
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999999888999 999999988765544 33432 1 2222221111223333332221 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 94 d~li~~Ag~ 102 (278)
T 2bgk_A 94 DIMFGNVGV 102 (278)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCcc
Confidence 999998873
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0086 Score=56.16 Aligned_cols=89 Identities=16% Similarity=0.168 Sum_probs=64.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++...+.+.++|...+ .++.+.+. ..|+|+-++
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~~ 228 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV--------EDLNEMLP-----KCDVIVINM 228 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC--------SCHHHHGG-----GCSEEEECS
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc--------CCHHHHHh-----cCCEEEECC
Confidence 58899999999999999999999999 89999998777777777775331 13333332 478888777
Q ss_pred cChH-----HHHHHHHHhccCCceEEEEc
Q 016363 282 GLTS-----VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~-----~~~~~~~~l~~~~G~~v~~g 305 (390)
+... .-...+..|+++ ..++.++
T Consensus 229 Plt~~t~~li~~~~l~~mk~g-ailIN~a 256 (351)
T 3jtm_A 229 PLTEKTRGMFNKELIGKLKKG-VLIVNNA 256 (351)
T ss_dssp CCCTTTTTCBSHHHHHHSCTT-EEEEECS
T ss_pred CCCHHHHHhhcHHHHhcCCCC-CEEEECc
Confidence 6321 114566777776 7777666
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0096 Score=53.71 Aligned_cols=82 Identities=23% Similarity=0.278 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC------------hhhHHHH----HhcCCcEE-EcCCCCCCcCH
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEIG----KKFGITDF-INPATCGDKTV 262 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~------------~~~~~~~----~~~g~~~v-~~~~~~~~~~~ 262 (390)
-.|.++||+|+ +++|.+.++.+...|+ +|++++++ +++.+.+ +..+.... +..+-.+..++
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 35789999998 9999999999999999 99999876 4444332 33444332 22111011223
Q ss_pred HHHHHhhcC--CCccEEEEcccC
Q 016363 263 SQVIKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 263 ~~~i~~~~~--~g~D~vid~~g~ 283 (390)
.+.+.+... +++|++|++.|.
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 333333222 379999999885
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.029 Score=51.34 Aligned_cols=75 Identities=20% Similarity=0.214 Sum_probs=55.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
.+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|......... + .+ ...|+||-|++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~----e---~~-----~~aDvvi~~vp~ 74 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAR----E---FA-----GVVDALVILVVN 74 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSST----T---TT-----TTCSEEEECCSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHH----H---HH-----hcCCEEEEECCC
Confidence 579999999999999998888999 9999999999999988877655222111 1 11 157888888887
Q ss_pred hHHHHHHH
Q 016363 284 TSVMNDAF 291 (390)
Q Consensus 284 ~~~~~~~~ 291 (390)
+......+
T Consensus 75 ~~~~~~v~ 82 (303)
T 3g0o_A 75 AAQVRQVL 82 (303)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65455443
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.042 Score=51.05 Aligned_cols=76 Identities=20% Similarity=0.218 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh----hHHHHHhc------CCcEEEcCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE----KFEIGKKF------GITDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~----~~~~~~~~------g~~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
.+.+|||+|+ |.+|...++.+...|. +|+++++++. ..+.+... ..-.++..+- .+ .+.+.++.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~ 98 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI---RD-LTTCEQVM 98 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT---TC-HHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC---CC-HHHHHHHh
Confidence 3679999998 9999999999999998 9999998654 23333332 2122332221 11 23444444
Q ss_pred CCCccEEEEcccC
Q 016363 271 DGGADYCFECIGL 283 (390)
Q Consensus 271 ~~g~D~vid~~g~ 283 (390)
. ++|+||++++.
T Consensus 99 ~-~~d~Vih~A~~ 110 (351)
T 3ruf_A 99 K-GVDHVLHQAAL 110 (351)
T ss_dssp T-TCSEEEECCCC
T ss_pred c-CCCEEEECCcc
Confidence 3 79999999985
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.37 E-value=0.012 Score=53.17 Aligned_cols=81 Identities=21% Similarity=0.198 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC------------hhhHHH----HHhcCCcEE-EcCCCCCCcCHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEI----GKKFGITDF-INPATCGDKTVS 263 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~------------~~~~~~----~~~~g~~~v-~~~~~~~~~~~~ 263 (390)
.+.++||+|+ +++|.+.++.+...|+ +|++++++ .++.+. ++..+.... +..+-.+..++.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 5789999998 9999999999999999 99999986 333332 233454332 211110112233
Q ss_pred HHHHhhcC--CCccEEEEcccC
Q 016363 264 QVIKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 264 ~~i~~~~~--~g~D~vid~~g~ 283 (390)
+.+.+... +++|+++++.|.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCC
Confidence 33332221 379999999884
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.013 Score=49.74 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=68.2
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCC--c-EEEcCCCCCCcCHHHHHH
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGI--T-DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~--~-~v~~~~~~~~~~~~~~i~ 267 (390)
....++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++ .+. . .++.. ++.+ +.
T Consensus 16 ~~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~------d~~~-~~ 87 (197)
T 3eey_A 16 IKMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD------GHQN-MD 87 (197)
T ss_dssp HHHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS------CGGG-GG
T ss_pred HHhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC------CHHH-Hh
Confidence 345688999999999865 778888888764 2399999999988877754 333 1 22222 2211 11
Q ss_pred hhcCCCccEEEEcccC---------------hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
...++.+|+|+...+- ...+..+.+.|+++ |+++...
T Consensus 88 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~ 139 (197)
T 3eey_A 88 KYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVI 139 (197)
T ss_dssp GTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred hhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEE
Confidence 1223489999865432 13578889999999 9998765
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0054 Score=53.45 Aligned_cols=87 Identities=11% Similarity=0.169 Sum_probs=58.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.+.++||+|+ +++|.+.++.+...|+ +|++++++++ .|-.+ ..++.+.+.++ +++|+++++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~--~~~v~~~~~~~--g~id~lv~n 66 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD--EKSVYHYFETI--GAFDHLIVT 66 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC--HHHHHHHHHHH--CSEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC--HHHHHHHHHHh--CCCCEEEEC
Confidence 4678999998 9999999999888899 9999997754 22222 12233333333 478999988
Q ss_pred ccChH--------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 281 IGLTS--------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 281 ~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.|... ..+.+.+.+++. |+++.++..
T Consensus 67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~ 118 (223)
T 3uce_A 67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGM 118 (223)
T ss_dssp CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecch
Confidence 87430 123344556666 899988854
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.025 Score=50.88 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=62.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+.+++|+|+|++|.+++..+...|. +|+++.|+++|.+.+.+++.. ...+++ + . .+|+||+|++
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~-----l-------~--~~DiVInaTp 181 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPP-----K-------S--AFDLIINATS 181 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCC-----S-------S--CCSEEEECCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHH-----h-------c--cCCEEEEccc
Confidence 8899999999999999999999995 999999999988766577743 333322 1 1 6999999987
Q ss_pred ChH------HHHHHHHHhccCCceEEEEc
Q 016363 283 LTS------VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 283 ~~~------~~~~~~~~l~~~~G~~v~~g 305 (390)
... ..+.+...++++ ..++++.
T Consensus 182 ~Gm~~~~~l~~~~l~~~l~~~-~~v~D~v 209 (269)
T 3phh_A 182 ASLHNELPLNKEVLKGYFKEG-KLAYDLA 209 (269)
T ss_dssp TCCCCSCSSCHHHHHHHHHHC-SEEEESC
T ss_pred CCCCCCCCCChHHHHhhCCCC-CEEEEeC
Confidence 542 112223356776 6777765
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0075 Score=54.74 Aligned_cols=81 Identities=14% Similarity=0.197 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+... .+..+-.+..++.+.+.+.. .++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999998 9999999998888899 8999998877765432 234332 22211101122333333222 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 122 id~li~~Ag~ 131 (285)
T 2c07_A 122 VDILVNNAGI 131 (285)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999874
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0062 Score=55.29 Aligned_cols=80 Identities=18% Similarity=0.185 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE--EEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+... ++..+-.+..++.+.+.+.. .+
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 9999999999888999 9999999988766543 234322 22211101112222222221 13
Q ss_pred CccEEEEc-cc
Q 016363 273 GADYCFEC-IG 282 (390)
Q Consensus 273 g~D~vid~-~g 282 (390)
++|++|++ .|
T Consensus 106 ~iD~li~naag 116 (286)
T 1xu9_A 106 GLDMLILNHIT 116 (286)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999988 44
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0055 Score=54.48 Aligned_cols=104 Identities=12% Similarity=0.109 Sum_probs=69.5
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~ 269 (390)
......++.+||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++ .|.. .+- ... .+..+.+..+
T Consensus 57 ~l~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~-~~~---~d~~~~l~~~ 131 (248)
T 3tfw_A 57 LLVRLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVT-LRE---GPALQSLESL 131 (248)
T ss_dssp HHHHHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEE-EEE---SCHHHHHHTC
T ss_pred HHHhhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEE-EEE---cCHHHHHHhc
Confidence 334566789999999864 778888888764 3399999999998877754 3433 111 111 3455555554
Q ss_pred cCC-CccEEEEcccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDG-GADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~-g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
... .+|+|+-.... ...++.+.+.|+++ |.++.-.
T Consensus 132 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 170 (248)
T 3tfw_A 132 GECPAFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDN 170 (248)
T ss_dssp CSCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEEC
T ss_pred CCCCCeEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeC
Confidence 433 89999843332 23467888999998 9887654
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.005 Score=55.75 Aligned_cols=79 Identities=20% Similarity=0.243 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC---c-EEE--cCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---T-DFI--NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~---~-~v~--~~~~~~~~~~~~~i~~~~ 270 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+. . ..+ |-.+ ..++.+.+.+..
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~ 81 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL 81 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC--HHHHHHHHHHHH
Confidence 4678999998 9999999999999999 99999999887655422 232 2 222 2222 122323333222
Q ss_pred C--CCccEEEEcccC
Q 016363 271 D--GGADYCFECIGL 283 (390)
Q Consensus 271 ~--~g~D~vid~~g~ 283 (390)
. +++|++|++.|.
T Consensus 82 ~~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGA 96 (280)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 2 379999998873
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0074 Score=54.04 Aligned_cols=81 Identities=20% Similarity=0.302 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcC-Cc-EEEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-G-AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFG-IT-DFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g-~~-~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+.+. +.+ .. .++..+-.+..++.+.+.+...
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 5789999998 7 799999999888999 9999999988765443 222 22 2222111011223333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 100 g~id~li~~Ag~ 111 (266)
T 3o38_A 100 GRLDVLVNNAGL 111 (266)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 379999999884
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.022 Score=53.08 Aligned_cols=87 Identities=18% Similarity=0.360 Sum_probs=62.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++++ +.+.++|... .++.+.+. ..|+|+.++
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~---------~~l~~~l~-----~aDvVil~v 212 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF---------KPLEDLLR-----ESDFVVLAV 212 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE---------CCHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc---------CCHHHHHh-----hCCEEEECC
Confidence 57799999999999999999999999 99999998877 5555566421 12333333 368888877
Q ss_pred cChHH----H-HHHHHHhccCCceEEEEc
Q 016363 282 GLTSV----M-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~----~-~~~~~~l~~~~G~~v~~g 305 (390)
+.... + ...+..|+++ ..++.++
T Consensus 213 p~~~~t~~~i~~~~~~~mk~~-ailIn~s 240 (334)
T 2dbq_A 213 PLTRETYHLINEERLKLMKKT-AILINIA 240 (334)
T ss_dssp CCCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred CCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence 65431 2 3456677776 6666665
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.011 Score=53.73 Aligned_cols=34 Identities=29% Similarity=0.277 Sum_probs=31.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.|.++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence 5789999998 9999999999999999 99999876
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.031 Score=51.63 Aligned_cols=88 Identities=15% Similarity=0.208 Sum_probs=63.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
..+|.|+|+|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-|++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~e~~~-----~aDvVi~~vp 96 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH--------EQARAAAR-----DADIVVSMLE 96 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE--------SSHHHHHT-----TCSEEEECCS
T ss_pred CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee--------CCHHHHHh-----cCCEEEEECC
Confidence 4589999999999999999888999 99999999999988877765322 13333332 5788888888
Q ss_pred ChHHHHHHH------HHhccCCceEEEEc
Q 016363 283 LTSVMNDAF------NSSREGWGKTVILG 305 (390)
Q Consensus 283 ~~~~~~~~~------~~l~~~~G~~v~~g 305 (390)
.+......+ ..++++ ..++.++
T Consensus 97 ~~~~~~~v~~~~~~~~~l~~~-~~vi~~s 124 (320)
T 4dll_A 97 NGAVVQDVLFAQGVAAAMKPG-SLFLDMA 124 (320)
T ss_dssp SHHHHHHHHTTTCHHHHCCTT-CEEEECS
T ss_pred CHHHHHHHHcchhHHhhCCCC-CEEEecC
Confidence 765455444 245554 4555554
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0081 Score=54.55 Aligned_cols=79 Identities=23% Similarity=0.308 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-----------HHHHHhcCCcEE-E--cCCCCCCcCHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-----------FEIGKKFGITDF-I--NPATCGDKTVSQVI 266 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-----------~~~~~~~g~~~v-~--~~~~~~~~~~~~~i 266 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+++++++++ .+.++..+.... + |-.+ ..++.+.+
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD--GDAVAAAV 84 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS--HHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHH
Confidence 4789999998 9999999999989999 99999998763 222334454322 2 2222 12233333
Q ss_pred HhhcC--CCccEEEEcccC
Q 016363 267 KEMTD--GGADYCFECIGL 283 (390)
Q Consensus 267 ~~~~~--~g~D~vid~~g~ 283 (390)
.+... +++|++|++.|.
T Consensus 85 ~~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 33222 379999999884
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0098 Score=57.93 Aligned_cols=92 Identities=20% Similarity=0.276 Sum_probs=68.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.-.|.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|.. + .++.+.+ ...|+|+-
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~--------~~l~ell-----~~aDiVi~ 318 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-V--------VTLDEIV-----DKGDFFIT 318 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-E--------CCHHHHT-----TTCSEEEE
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-e--------cCHHHHH-----hcCCEEEE
Confidence 4578999999999999999999999999 999999998876445555542 1 1233332 25899998
Q ss_pred cccChHHH-HHHHHHhccCCceEEEEccc
Q 016363 280 CIGLTSVM-NDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 280 ~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 307 (390)
+.++...+ ...++.|+++ ..++.+|..
T Consensus 319 ~~~t~~lI~~~~l~~MK~g-ailiNvgrg 346 (479)
T 1v8b_A 319 CTGNVDVIKLEHLLKMKNN-AVVGNIGHF 346 (479)
T ss_dssp CCSSSSSBCHHHHTTCCTT-CEEEECSST
T ss_pred CCChhhhcCHHHHhhcCCC-cEEEEeCCC
Confidence 87665533 3677888888 888888743
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.034 Score=51.77 Aligned_cols=131 Identities=14% Similarity=0.158 Sum_probs=80.2
Q ss_pred CEEEEEcCChHHHHHHHHHH-Hc-CCCeEE-EecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEE
Q 016363 204 STVAIFGLGAVGLAVAEGAR-LN-RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~-~~-g~~~Vi-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vi 278 (390)
-+|.|+|+|.+|...++.++ .. ++ +++ +.++++++.+.+ +++|...+++ ++.+.+ .. ++|+|+
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~-~~vav~d~~~~~~~~~a~~~g~~~~~~-------~~~~~l----~~~~~D~V~ 76 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGV-KLVAACALDSNQLEWAKNELGVETTYT-------NYKDMI----DTENIDAIF 76 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSE-EEEEEECSCHHHHHHHHHTTCCSEEES-------CHHHHH----TTSCCSEEE
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCc-EEEEEecCCHHHHHHHHHHhCCCcccC-------CHHHHh----cCCCCCEEE
Confidence 47899999999998888776 43 66 654 567888877554 5577654442 333332 33 799999
Q ss_pred EcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccc-hHhhh-----c-ceeEEeeecCCCCchhhHHHHHHHHHcCC
Q 016363 279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEIL-----K-GRSVCGTYFGGLKPRSDIATLAQKYLDKE 351 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~~-----~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 351 (390)
.|++.....+.+..+++. |+-+.+..+.. .+.. ...+. . ++.+.... .......+..+.+++++|.
T Consensus 77 i~tp~~~h~~~~~~al~~--G~~v~~eKp~~---~~~~~~~~l~~~a~~~~~~~~~~~~--~~r~~p~~~~~~~~i~~g~ 149 (346)
T 3cea_A 77 IVAPTPFHPEMTIYAMNA--GLNVFCEKPLG---LDFNEVDEMAKVIKSHPNQIFQSGF--MRRYDDSYRYAKKIVDNGD 149 (346)
T ss_dssp ECSCGGGHHHHHHHHHHT--TCEEEECSCCC---SCHHHHHHHHHHHHTCTTSCEECCC--GGGTCHHHHHHHHHHHTTT
T ss_pred EeCChHhHHHHHHHHHHC--CCEEEEcCCCC---CCHHHHHHHHHHHHhCCCCeEEEec--ccccCHHHHHHHHHHHcCC
Confidence 999988767788888875 56555642211 1111 11121 2 33332221 1122346788888999886
Q ss_pred CC
Q 016363 352 LN 353 (390)
Q Consensus 352 ~~ 353 (390)
+-
T Consensus 150 iG 151 (346)
T 3cea_A 150 IG 151 (346)
T ss_dssp TC
T ss_pred CC
Confidence 53
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.014 Score=52.76 Aligned_cols=80 Identities=16% Similarity=0.218 Sum_probs=52.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH----HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
..+.++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+ ...+... .+ |-.+ ..++.+.+.+...
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~ 103 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD--LSSHQATVDAVVA 103 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS--GGGHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHH
Confidence 45789999998 9999999999999999 8999885 65554433 3344432 22 2222 2334444443322
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 104 ~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 104 EFGRIDCLVNNAGI 117 (280)
T ss_dssp HHSCCCEEEEECC-
T ss_pred HcCCCCEEEECCCc
Confidence 379999999885
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.032 Score=45.32 Aligned_cols=94 Identities=9% Similarity=-0.013 Sum_probs=60.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHHHh---cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKK---FGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
..+|+|+|+|.+|...++.+...|. +|++++++ +++.+.+.+ .|...+. .+. .-.+.+.+..-.++|+|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~-gd~----~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GDS----NDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SCT----TSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEE-cCC----CCHHHHHHcChhhCCEEE
Confidence 4679999999999999999999998 89999987 455555543 2443332 221 223344444334899999
Q ss_pred EcccChHHHHH----HHHHhccCCceEEEE
Q 016363 279 ECIGLTSVMND----AFNSSREGWGKTVIL 304 (390)
Q Consensus 279 d~~g~~~~~~~----~~~~l~~~~G~~v~~ 304 (390)
-+++... .+. ..+.+.+. .+++..
T Consensus 77 ~~~~~d~-~n~~~~~~a~~~~~~-~~ii~~ 104 (153)
T 1id1_A 77 ALSDNDA-DNAFVVLSAKDMSSD-VKTVLA 104 (153)
T ss_dssp ECSSCHH-HHHHHHHHHHHHTSS-SCEEEE
T ss_pred EecCChH-HHHHHHHHHHHHCCC-CEEEEE
Confidence 9999765 332 23344344 466543
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0065 Score=54.15 Aligned_cols=81 Identities=20% Similarity=0.215 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+ +..+... ++..+-.+..++.+.+.+... +
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999998 9999999998888999 9999998 76655433 2234332 222111011223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 85 ~id~li~~Ag~ 95 (261)
T 1gee_A 85 KLDVMINNAGL 95 (261)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.021 Score=51.53 Aligned_cols=74 Identities=14% Similarity=0.065 Sum_probs=52.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
++.+++|+|+|++|.++++.+...|+ +|+++.+++++.+.+ ++++...-++..+ + +.+.+ +++|+++++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~-----~-~~~~~---~~~DivVn~ 187 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS-----M-DELEG---HEFDLIINA 187 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC-----S-GGGTT---CCCSEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec-----H-HHhcc---CCCCEEEEC
Confidence 67899999999999999999999997 999999999886554 4454310011111 1 01111 479999999
Q ss_pred ccChH
Q 016363 281 IGLTS 285 (390)
Q Consensus 281 ~g~~~ 285 (390)
++...
T Consensus 188 t~~~~ 192 (271)
T 1nyt_A 188 TSSGI 192 (271)
T ss_dssp CSCGG
T ss_pred CCCCC
Confidence 99765
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.014 Score=54.67 Aligned_cols=88 Identities=17% Similarity=0.152 Sum_probs=63.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++ +.+.+.+.|...+ .++.+.+. ..|+|+-++
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~--------~~l~ell~-----~aDiV~l~~ 223 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA--------ESKDALFE-----QSDVLSVHL 223 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe--------CCHHHHHh-----hCCEEEEec
Confidence 47899999999999999999999999 999999875 3455556665321 13444443 378888877
Q ss_pred cChHH-----HHHHHHHhccCCceEEEEc
Q 016363 282 GLTSV-----MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~-----~~~~~~~l~~~~G~~v~~g 305 (390)
+.... -...+..|+++ ..++.++
T Consensus 224 Plt~~t~~li~~~~l~~mk~g-ailIN~a 251 (352)
T 3gg9_A 224 RLNDETRSIITVADLTRMKPT-ALFVNTS 251 (352)
T ss_dssp CCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred cCcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence 63321 13567778887 8888777
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.01 Score=53.59 Aligned_cols=79 Identities=20% Similarity=0.244 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-------HH----HHHhcCCcEE-E--cCCCCCCcCHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FE----IGKKFGITDF-I--NPATCGDKTVSQVI 266 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-------~~----~~~~~g~~~v-~--~~~~~~~~~~~~~i 266 (390)
.|+++||+|+ +++|.+.++.+...|+ +|++++++.++ .+ .++..+.... + |-.+ ..++.+.+
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~ 81 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE--EDQVRAAV 81 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC--HHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHH
Confidence 5789999998 9999999999999999 99999988653 22 2223343322 2 2222 12233333
Q ss_pred HhhcC--CCccEEEEcccC
Q 016363 267 KEMTD--GGADYCFECIGL 283 (390)
Q Consensus 267 ~~~~~--~g~D~vid~~g~ 283 (390)
.+... +++|+++++.|.
T Consensus 82 ~~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCc
Confidence 33222 379999999984
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0082 Score=54.07 Aligned_cols=81 Identities=15% Similarity=0.166 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+ +..+.... +..+-.+..++.+.+.+... +
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 8988887 55544433 33444322 22111011223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 106 ~id~lv~nAg~ 116 (269)
T 4dmm_A 106 RLDVLVNNAGI 116 (269)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999885
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.014 Score=53.38 Aligned_cols=81 Identities=17% Similarity=0.192 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC------------hhhHHH----HHhcCCcEEE-cCCCCCCcCHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEI----GKKFGITDFI-NPATCGDKTVS 263 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~------------~~~~~~----~~~~g~~~v~-~~~~~~~~~~~ 263 (390)
.|.++||+|+ +++|.+.++.+...|+ +|++++++ +++.+. ++..+..... ..+-.+..++.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 5789999998 9999999999999999 99999876 444332 2344544322 11110112233
Q ss_pred HHHHhhcC--CCccEEEEcccC
Q 016363 264 QVIKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 264 ~~i~~~~~--~g~D~vid~~g~ 283 (390)
+.+.+... +++|++|++.|.
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhCCCCEEEECCCC
Confidence 33333222 379999998873
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0082 Score=54.01 Aligned_cols=81 Identities=19% Similarity=0.237 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|++++++ ++..+.+ ++.+... ++..+-.+..++.+.+.+... +
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 106 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG 106 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5789999998 9999999999889999 99999984 4443333 3344332 222222111223333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 107 ~id~li~nAg~ 117 (271)
T 4iin_A 107 GLSYLVNNAGV 117 (271)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999885
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0084 Score=54.13 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCC--c-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI--T-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~--~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++.. . ..+..+-.+..++.+.+.+... +++|+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 100 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG 100 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 68999998 9999999999999999 9999999988776553 2321 1 2222111011233333433322 26899
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 101 lvnnAG~ 107 (272)
T 2nwq_A 101 LINNAGL 107 (272)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999874
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0072 Score=52.70 Aligned_cols=102 Identities=15% Similarity=0.175 Sum_probs=69.7
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHH
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~ 267 (390)
......++++||-+|+| .|..++.+++... ..+|++++.+++..+.+++ .|.. .++. .+..+.+.
T Consensus 63 ~l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~------~d~~~~~~ 135 (229)
T 2avd_A 63 NLARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL------KPALETLD 135 (229)
T ss_dssp HHHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHH
T ss_pred HHHHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE------cCHHHHHH
Confidence 34456778999999987 7888888888763 3399999999998877764 2431 2222 24444444
Q ss_pred hhcC----CCccEEEEcccCh---HHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTD----GGADYCFECIGLT---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~----~g~D~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
++.. +.+|+|+...... ..+..+.+.|+++ |.++...
T Consensus 136 ~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~ 179 (229)
T 2avd_A 136 ELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR 179 (229)
T ss_dssp HHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred HHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEC
Confidence 4432 4799998543332 3477888999998 9988654
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.016 Score=53.94 Aligned_cols=88 Identities=24% Similarity=0.360 Sum_probs=65.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++.+ +.+.++|+.. .++.+.+. ..|+|+.++
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~---------~~l~ell~-----~aDvV~l~~ 227 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ---------LPLEEIWP-----LCDFITVHT 227 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE---------CCHHHHGG-----GCSEEEECC
T ss_pred CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee---------CCHHHHHh-----cCCEEEEec
Confidence 57899999999999999999999999 99999988766 3556677532 12333222 589999888
Q ss_pred cChHH----H-HHHHHHhccCCceEEEEcc
Q 016363 282 GLTSV----M-NDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 282 g~~~~----~-~~~~~~l~~~~G~~v~~g~ 306 (390)
+.... + ...+..|+++ +.++.++.
T Consensus 228 P~t~~t~~li~~~~l~~mk~g-ailIN~ar 256 (335)
T 2g76_A 228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCAR 256 (335)
T ss_dssp CCCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred CCCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence 75431 2 3567788887 88888874
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0094 Score=56.25 Aligned_cols=90 Identities=19% Similarity=0.251 Sum_probs=64.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCe-EEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASK-IIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~-Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.|.+|.|+|.|.+|...++.++..|+ + |++.++++.+.+.+.++|+..+ .++.+.+. ..|+|+.+
T Consensus 163 ~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~ 228 (364)
T 2j6i_A 163 EGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGARRV--------ENIEELVA-----QADIVTVN 228 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTEEEC--------SSHHHHHH-----TCSEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCcEec--------CCHHHHHh-----cCCEEEEC
Confidence 68899999999999999999999999 6 9999988877766666764321 13433332 47888887
Q ss_pred ccChH----HH-HHHHHHhccCCceEEEEcc
Q 016363 281 IGLTS----VM-NDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 281 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~ 306 (390)
++... .+ ...+..|+++ ..++.++.
T Consensus 229 ~P~t~~t~~li~~~~l~~mk~g-a~lIn~ar 258 (364)
T 2j6i_A 229 APLHAGTKGLINKELLSKFKKG-AWLVNTAR 258 (364)
T ss_dssp CCCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred CCCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence 77531 12 3456777776 77777763
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.016 Score=51.42 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=70.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc----EEEcCCCCCCcCHHHHHHhh
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT----DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.....++++.+||-+|+| .|..+..+++..+. +|++++.+++.++.+++.... .++..+- .++ ..
T Consensus 47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~-----~~ 116 (266)
T 3ujc_A 47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI---LTK-----EF 116 (266)
T ss_dssp HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT---TTC-----CC
T ss_pred HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc---ccC-----CC
Confidence 3355678899999999987 67888888887787 999999999999988875422 2222111 111 11
Q ss_pred cCCCccEEEEcccCh--------HHHHHHHHHhccCCceEEEEcc
Q 016363 270 TDGGADYCFECIGLT--------SVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 270 ~~~g~D~vid~~g~~--------~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
..+.+|+|+....-. ..+..+.+.|+++ |+++....
T Consensus 117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~ 160 (266)
T 3ujc_A 117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY 160 (266)
T ss_dssp CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence 234899999753321 2357788899998 99887754
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0061 Score=54.91 Aligned_cols=78 Identities=18% Similarity=0.305 Sum_probs=50.6
Q ss_pred hCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 198 AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 198 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
..-..+++|||+|+ +++|.+.++.+...|+ +|+++++++++.. +....+ |-.+ ..++.+.+.+... +
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV-----NVSDHFKIDVTN--EEEVKEAVEKTTKKYG 80 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT-----TSSEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc-----CceeEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 34557899999998 9999999999999999 9999998876541 111222 2222 1223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 81 ~iD~lv~nAg~ 91 (269)
T 3vtz_A 81 RIDILVNNAGI 91 (269)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999884
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.002 Score=58.02 Aligned_cols=75 Identities=16% Similarity=0.176 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~vi 278 (390)
.|.++||+|+ |++|.+.++.+...|+ +|++++++.++.+....+. .|-.+ .....+.+.+... +++|+++
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~----~Dv~~--~~~~~~~~~~~~~~~g~iD~lv 99 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHLP----GDLRE--AAYADGLPGAVAAGLGRLDIVV 99 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEECC----CCTTS--HHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhccC----cCCCC--HHHHHHHHHHHHHhcCCCCEEE
Confidence 5789999998 9999999999999999 9999998866543221110 11111 1112222222211 3799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 100 nnAg~ 104 (266)
T 3uxy_A 100 NNAGV 104 (266)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99884
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0058 Score=56.51 Aligned_cols=102 Identities=23% Similarity=0.329 Sum_probs=69.8
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i 266 (390)
+.+...++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ .|... ++.. ++.+.+
T Consensus 67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~------d~~~~~ 139 (317)
T 1dl5_A 67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG------DGYYGV 139 (317)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES------CGGGCC
T ss_pred HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC------Chhhcc
Confidence 44667899999999999976 7888888887542 379999999998877754 34332 2221 221111
Q ss_pred HhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
. ..+.+|+|+....-......+.+.|+++ |+++..-
T Consensus 140 ~--~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~ 175 (317)
T 1dl5_A 140 P--EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI 175 (317)
T ss_dssp G--GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred c--cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence 0 1237999997766555346788999998 9887653
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.013 Score=53.09 Aligned_cols=83 Identities=16% Similarity=0.228 Sum_probs=52.9
Q ss_pred CCCCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEecCCh--hhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhc--C
Q 016363 200 VEVGSTVAIFGL-GA--VGLAVAEGARLNRASKIIGVDINP--EKFEIGKK-FGITDFINPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~--vG~~ai~la~~~g~~~Vi~~~~~~--~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~--~ 271 (390)
.-.+.++||+|+ |. +|.+.++.+...|+ +|+++++++ +..+.+.+ .+.-..+..+-.+..++.+.+.+.. -
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 345789999986 55 99999999889999 999999887 55555533 3433333222211122333333322 1
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 102 g~id~li~nAg~ 113 (280)
T 3nrc_A 102 DGLDAIVHSIAF 113 (280)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 379999999874
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.034 Score=48.40 Aligned_cols=102 Identities=13% Similarity=0.105 Sum_probs=67.5
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHH
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~ 267 (390)
...+.+++.+||-+|+| .|..++.+++.+ +. +|++++.+++..+.+++ .|.. .+--.. .+..+.+.
T Consensus 50 ~~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~----gda~~~l~ 123 (221)
T 3dr5_A 50 ATTNGNGSTGAIAITPA-AGLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFLL----SRPLDVMS 123 (221)
T ss_dssp HHSCCTTCCEEEEESTT-HHHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC----SCHHHHGG
T ss_pred HhhCCCCCCCEEEEcCC-chHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE----cCHHHHHH
Confidence 34455566799988875 578888888876 45 99999999998877754 3432 221111 24444443
Q ss_pred hhcCCCccEEEEcccCh---HHHHHHHHHhccCCceEEEE
Q 016363 268 EMTDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~~---~~~~~~~~~l~~~~G~~v~~ 304 (390)
.+..+.||+||-..... ..++.+.+.|+++ |.++.-
T Consensus 124 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d 162 (221)
T 3dr5_A 124 RLANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLA 162 (221)
T ss_dssp GSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEET
T ss_pred HhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEe
Confidence 33345899998543322 2467888999998 988754
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.015 Score=52.83 Aligned_cols=82 Identities=21% Similarity=0.145 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCC--CeEEEecCChhhHHHHHh-c-----CCcE-EEcCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRA--SKIIGVDINPEKFEIGKK-F-----GITD-FINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~--~~Vi~~~~~~~~~~~~~~-~-----g~~~-v~~~~~~~~~~~~~~i~~~~~ 271 (390)
.|.++||+|+ +++|.+.++.+...|+ .+|+.+++++++.+.+.+ + +... .+..+-.+..++.+.+.+...
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4789999998 9999998877666654 289999999888765532 2 3322 222111113345555554433
Q ss_pred C--CccEEEEcccC
Q 016363 272 G--GADYCFECIGL 283 (390)
Q Consensus 272 ~--g~D~vid~~g~ 283 (390)
. ++|++|++.|.
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 3 79999999883
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.014 Score=59.20 Aligned_cols=79 Identities=18% Similarity=0.154 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC---------ChhhHHH----HHhcCCcEEEcCCCCCCcCHHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI---------NPEKFEI----GKKFGITDFINPATCGDKTVSQVIK 267 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~---------~~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~i~ 267 (390)
.|.++||+|+ +++|.+.++.+...|+ +|+++++ +.++.+. ++..+...+.+..+ ..+..+.+.
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d--~~~~~~~~~ 94 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNS--VIDGAKVIE 94 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCC--GGGHHHHHC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCC--HHHHHHHHH
Confidence 5789999998 9999999999989999 9999876 4444333 33455555666544 223333343
Q ss_pred hhcCC--CccEEEEcccC
Q 016363 268 EMTDG--GADYCFECIGL 283 (390)
Q Consensus 268 ~~~~~--g~D~vid~~g~ 283 (390)
+.... ++|++|++.|.
T Consensus 95 ~~~~~~g~iDiLVnnAGi 112 (613)
T 3oml_A 95 TAIKAFGRVDILVNNAGI 112 (613)
T ss_dssp ----------CEECCCCC
T ss_pred HHHHHCCCCcEEEECCCC
Confidence 33332 79999999884
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.011 Score=52.23 Aligned_cols=81 Identities=21% Similarity=0.217 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|...++.+...|+ +|+++ .+++++.+.+ +..+... .+..+-.+..++.+.+.+... +
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4678999998 9999999999999999 89988 6666554433 2334332 222111011223333332221 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 83 ~~d~vi~~Ag~ 93 (247)
T 2hq1_A 83 RIDILVNNAGI 93 (247)
T ss_dssp CCCEEEECC--
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.028 Score=48.66 Aligned_cols=75 Identities=12% Similarity=0.051 Sum_probs=56.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|+|+|+|.+|...++.+...|. .|+++++++++.+.+.+ ++...+. .+. .-.+.+++..-.++|+|+-+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~-gd~----~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIH-GDG----SHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEE-SCT----TSHHHHHHHTCCTTCEEEECCSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEE-cCC----CCHHHHHhcCcccCCEEEEecCC
Confidence 58999999999999999999999 99999999999887654 5654333 222 22344544433489999999998
Q ss_pred hH
Q 016363 284 TS 285 (390)
Q Consensus 284 ~~ 285 (390)
..
T Consensus 76 d~ 77 (218)
T 3l4b_C 76 DE 77 (218)
T ss_dssp HH
T ss_pred cH
Confidence 76
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.027 Score=50.87 Aligned_cols=98 Identities=13% Similarity=0.171 Sum_probs=68.4
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CC--c-EEEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GI--T-DFINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~--~-~v~~~~~~~~~~~~~~i 266 (390)
+.+..+++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++. +. . .++. . ++.
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~-~-----d~~--- 124 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL-A-----GWE--- 124 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE-S-----CGG---
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE-C-----Chh---
Confidence 34556788999999999865 7778888877798 999999999988877652 32 1 1221 1 221
Q ss_pred HhhcCCCccEEEEc-----ccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
++. +.+|+|+.. ++. ...++.+.+.|+++ |+++...
T Consensus 125 -~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 168 (287)
T 1kpg_A 125 -QFD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHT 168 (287)
T ss_dssp -GCC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred -hCC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEE
Confidence 222 579999864 221 23467888999999 9988665
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.017 Score=52.66 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=35.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhhHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG 243 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~~ 243 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++ +++++.+.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~ 50 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL 50 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence 4678999998 9999999999999999 999999 988776544
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=96.17 E-value=0.023 Score=53.30 Aligned_cols=90 Identities=19% Similarity=0.302 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
-.|.+|.|+|.|.+|...++.++ ..|. +|++.++++++.+...++|...+ .++.+.+. ..|+|+.
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvVil 226 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV--------DSLEELAR-----RSDCVSV 226 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHHH-----HCSEEEE
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe--------CCHHHHhc-----cCCEEEE
Confidence 35789999999999999999999 9999 99999998877666655664321 12333332 3677777
Q ss_pred cccChHH----H-HHHHHHhccCCceEEEEc
Q 016363 280 CIGLTSV----M-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 280 ~~g~~~~----~-~~~~~~l~~~~G~~v~~g 305 (390)
++..... + ...+..|+++ ..++.++
T Consensus 227 ~vp~~~~t~~li~~~~l~~mk~g-ailin~s 256 (348)
T 2w2k_A 227 SVPYMKLTHHLIDEAFFAAMKPG-SRIVNTA 256 (348)
T ss_dssp CCCCSGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred eCCCChHHHHHhhHHHHhcCCCC-CEEEECC
Confidence 7664321 1 2345566665 5565554
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.018 Score=53.09 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=52.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC---hhhHHHHH-h----cCCc-EEEcCCCCCCcCHHHHHHhhcCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---PEKFEIGK-K----FGIT-DFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~---~~~~~~~~-~----~g~~-~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
.+.++||+|+|++|.+++..+...|+++|+++.|+ .++.+.+. + ++.. .++..++ ..++.+.+.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~--~~~l~~~l~----- 225 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED--HEQLRKEIA----- 225 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHHH-----
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch--HHHHHhhhc-----
Confidence 68899999999999999999999999889999999 66655442 2 2322 2333332 011222222
Q ss_pred CccEEEEcccCh
Q 016363 273 GADYCFECIGLT 284 (390)
Q Consensus 273 g~D~vid~~g~~ 284 (390)
.+|+||+|++..
T Consensus 226 ~aDiIINaTp~G 237 (315)
T 3tnl_A 226 ESVIFTNATGVG 237 (315)
T ss_dssp TCSEEEECSSTT
T ss_pred CCCEEEECccCC
Confidence 599999998743
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0084 Score=54.95 Aligned_cols=95 Identities=12% Similarity=0.002 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCc--EEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT--DFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
-.+.+|+|+|+|++|.+++..+...|+.+|++..+++++.+.+ +.++.. .++ ++ +.+.+.. +++|+|
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--------~~-~~~~~~~-~~aDiv 208 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF--------SL-AEAETRL-AEYDII 208 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE--------CH-HHHHHTG-GGCSEE
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee--------eH-HHHHhhh-ccCCEE
Confidence 3678999999999999999999999987999999999886555 455542 222 12 1232222 269999
Q ss_pred EEcccChHHH-----HHHHHHhccCCceEEEEcc
Q 016363 278 FECIGLTSVM-----NDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 278 id~~g~~~~~-----~~~~~~l~~~~G~~v~~g~ 306 (390)
|+|++..... ......++++ ..++.+..
T Consensus 209 In~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y 241 (297)
T 2egg_A 209 INTTSVGMHPRVEVQPLSLERLRPG-VIVSDIIY 241 (297)
T ss_dssp EECSCTTCSSCCSCCSSCCTTCCTT-CEEEECCC
T ss_pred EECCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC
Confidence 9999865410 0112345555 56666653
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=96.17 E-value=0.022 Score=52.70 Aligned_cols=89 Identities=17% Similarity=0.174 Sum_probs=63.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++ ++++ +.+.++|... . .++.+.+. ..|+|+.+
T Consensus 145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~-------~~l~ell~-----~aDvVil~ 209 (320)
T 1gdh_A 145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H-------DSLDSLLS-----VSQFFSLN 209 (320)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C-------SSHHHHHH-----HCSEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c-------CCHHHHHh-----hCCEEEEe
Confidence 57899999999999999999999999 9999998 7766 3455566532 1 13434333 47888888
Q ss_pred ccChH----HH-HHHHHHhccCCceEEEEcc
Q 016363 281 IGLTS----VM-NDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 281 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~ 306 (390)
++... .+ ...+..|+++ ..++.++.
T Consensus 210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar 239 (320)
T 1gdh_A 210 APSTPETRYFFNKATIKSLPQG-AIVVNTAR 239 (320)
T ss_dssp CCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred ccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence 77432 11 3456778877 77777763
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0084 Score=53.27 Aligned_cols=75 Identities=21% Similarity=0.268 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhc--CCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~--~~g~D~v 277 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++++++. ++.+...+ .|-.+ ..++.+.+.+.. -+++|++
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~id~l 78 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD--AAQVAQVCQRLLAETERLDAL 78 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC--HHHHHHHHHHHHHHCSCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 9999999999999999 99999988653 22332221 12222 122333333322 2379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|++.|.
T Consensus 79 v~~Ag~ 84 (250)
T 2fwm_X 79 VNAAGI 84 (250)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999884
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.006 Score=54.84 Aligned_cols=74 Identities=16% Similarity=0.112 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE--cCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI--NPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++. +.....+ |-.+ ..+..+.+.+... |++|+
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-----~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~iDi 81 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-----LPEELFVEADLTT--KEGCAIVAEATRQRLGGVDV 81 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-----SCTTTEEECCTTS--HHHHHHHHHHHHHHTSSCSE
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-----CCcEEEEEcCCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 6899999998 9999999999999999 999999875431 2211122 2222 1222222332222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 82 lVnnAG~ 88 (261)
T 4h15_A 82 IVHMLGG 88 (261)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998773
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=96.15 E-value=0.011 Score=53.68 Aligned_cols=81 Identities=12% Similarity=0.063 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHHHHH-----hcCCcE-EEcCCCCC----CcCHHHHHHhh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIGK-----KFGITD-FINPATCG----DKTVSQVIKEM 269 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~-----~~g~~~-v~~~~~~~----~~~~~~~i~~~ 269 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++ ++.+.+. ..+... .+..+-.+ ..++.+.+.+.
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 4688999998 9999999999888999 999999987 6654332 234332 22222101 11222222222
Q ss_pred cC--CCccEEEEcccC
Q 016363 270 TD--GGADYCFECIGL 283 (390)
Q Consensus 270 ~~--~g~D~vid~~g~ 283 (390)
.. +++|++|++.|.
T Consensus 101 ~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 11 379999998873
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.013 Score=54.27 Aligned_cols=77 Identities=19% Similarity=0.088 Sum_probs=50.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-----CCc-EEE-cCCCCCCcCHHHHHHhhcCC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-----GIT-DFI-NPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-----g~~-~v~-~~~~~~~~~~~~~i~~~~~~ 272 (390)
.++.+|||+|+ |.+|...++.+...|. +|+++++++++.+.+... +.. .++ ..+- .+.+ .+.++..
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~d~~---~~~~~~~- 82 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM-LKQG---AYDEVIK- 82 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCT-TSTT---TTTTTTT-
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCC-cChH---HHHHHHc-
Confidence 45789999998 9999999998888899 999999998776554331 222 222 1111 1111 1222222
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+||++++.
T Consensus 83 ~~d~vih~A~~ 93 (342)
T 1y1p_A 83 GAAGVAHIASV 93 (342)
T ss_dssp TCSEEEECCCC
T ss_pred CCCEEEEeCCC
Confidence 79999999874
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.011 Score=54.75 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-----hhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-----PEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-----~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~ 271 (390)
+.++||+|+ |++|.+.++.+...|+ +|++++++ +++.+.+. ..+... .+..+-.+..++.+.+.+...
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 578999998 9999999999999999 99987765 33444332 234332 222221112233333433322
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 84 ~~g~iD~lVnnAG~ 97 (324)
T 3u9l_A 84 EDGRIDVLIHNAGH 97 (324)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 379999999983
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.02 Score=52.76 Aligned_cols=91 Identities=15% Similarity=0.207 Sum_probs=61.2
Q ss_pred CEEEEEcCChHHHHHHHHHHH--cCCCeEEEecCChhh--HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEE
Q 016363 204 STVAIFGLGAVGLAVAEGARL--NRASKIIGVDINPEK--FEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~--~g~~~Vi~~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vi 278 (390)
-+|.|+|+|.+|...+..+.. -+.+-+.+.++++++ .+.++++|..... .++ +.+.+.+.+ ++|+||
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~-------~~~-e~ll~~~~~~~iDvV~ 76 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-------AGV-EGLIKLPEFADIDFVF 76 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-------SHH-HHHHHSGGGGGEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc-------CCH-HHHHhccCCCCCcEEE
Confidence 479999999999988887743 456344556666666 4566778764221 123 334333333 799999
Q ss_pred EcccChHHHHHHHHHhcc--CCceEEE
Q 016363 279 ECIGLTSVMNDAFNSSRE--GWGKTVI 303 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~--~~G~~v~ 303 (390)
++++.....+.+...+.. + ..++.
T Consensus 77 ~atp~~~h~~~a~~al~a~~G-k~Vi~ 102 (312)
T 1nvm_B 77 DATSASAHVQNEALLRQAKPG-IRLID 102 (312)
T ss_dssp ECSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred ECCChHHHHHHHHHHHHhCCC-CEEEE
Confidence 999977767778888887 6 66654
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=96.13 E-value=0.014 Score=55.57 Aligned_cols=89 Identities=16% Similarity=0.112 Sum_probs=59.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++.+.+...++|+... .++.+.+. ..|+|+.++
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~--------~~l~ell~-----~aDvV~l~~ 255 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATREDMYP-----VCDVVTLNC 255 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHGG-----GCSEEEECS
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec--------CCHHHHHh-----cCCEEEEec
Confidence 58899999999999999999999999 99999988766666666665321 12322221 467777666
Q ss_pred cChH----HH-HHHHHHhccCCceEEEEc
Q 016363 282 GLTS----VM-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~----~~-~~~~~~l~~~~G~~v~~g 305 (390)
.... .+ ...+..|+++ ..++.++
T Consensus 256 Plt~~t~~li~~~~l~~mk~g-ailIN~a 283 (393)
T 2nac_A 256 PLHPETEHMINDETLKLFKRG-AYIVNTA 283 (393)
T ss_dssp CCCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred CCchHHHHHhhHHHHhhCCCC-CEEEECC
Confidence 5321 11 3455566665 5666555
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.011 Score=52.72 Aligned_cols=77 Identities=18% Similarity=0.289 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE-EE--cCCCCCCcCHHHHHHhhc-CCCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FI--NPATCGDKTVSQVIKEMT-DGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~-v~--~~~~~~~~~~~~~i~~~~-~~g~D~ 276 (390)
.+.++||+|+ +++|.+.++.+...|+ +|++++++.++ ..++++... .+ |-.+ ..++.+.+.... -+++|+
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~g~id~ 82 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTD--EAAVASALDLAETMGTLRI 82 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTC--HHHHHHHHHHHHHHSCEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhCCCCE
Confidence 4689999998 9999999999889999 99999985543 334455332 22 2222 122222222111 248999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 83 lv~nAg~ 89 (257)
T 3tl3_A 83 VVNCAGT 89 (257)
T ss_dssp EEECGGG
T ss_pred EEECCCC
Confidence 9999984
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=96.13 E-value=0.011 Score=53.11 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++ .-....+ .|-.+ ..++.+.+.+... +++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g~iD~l 78 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTN--PDQVKASIDHIFKEYGSISVL 78 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTC--HHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4688999998 9999999999999999 99999988765 1111111 12222 1223333333222 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|++.|.
T Consensus 79 v~~Ag~ 84 (264)
T 2dtx_A 79 VNNAGI 84 (264)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999884
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.01 Score=51.70 Aligned_cols=101 Identities=17% Similarity=0.067 Sum_probs=68.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-----CCeEEEecCChhhHHHHHh----cC-----Cc--EEEcCCCCCCcCH
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNR-----ASKIIGVDINPEKFEIGKK----FG-----IT--DFINPATCGDKTV 262 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g-----~~~Vi~~~~~~~~~~~~~~----~g-----~~--~v~~~~~~~~~~~ 262 (390)
.++++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++ .+ .. .++..+. ...+
T Consensus 77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~~ 153 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI--YQVN 153 (227)
T ss_dssp TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG--GGCC
T ss_pred hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh--Hhcc
Confidence 688999999999976 888888888876 1289999999988877754 23 11 2222211 0011
Q ss_pred HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 263 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 263 ~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+.. ...+.+|+|+........+..+.+.|+++ |+++..-
T Consensus 154 ~~~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~ 193 (227)
T 2pbf_A 154 EEEK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPI 193 (227)
T ss_dssp HHHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEE
T ss_pred cccC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence 0000 11237999997776655568889999998 9887654
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.014 Score=54.08 Aligned_cols=82 Identities=20% Similarity=0.227 Sum_probs=52.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC----------hhhHHH----HHhcCCcEEEcCCCCC-CcCHHH
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN----------PEKFEI----GKKFGITDFINPATCG-DKTVSQ 264 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~----------~~~~~~----~~~~g~~~v~~~~~~~-~~~~~~ 264 (390)
-.|.++||+|+ +++|.+.++.+...|+ +|++++++ .++.+. +...+....+..-+.. ..++.+
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 46789999998 9999999999889999 99999876 444332 3334543332222211 122222
Q ss_pred HHHhhcC--CCccEEEEcccC
Q 016363 265 VIKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 265 ~i~~~~~--~g~D~vid~~g~ 283 (390)
.+.+... +++|++|++.|.
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 2332222 379999999884
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.012 Score=54.68 Aligned_cols=88 Identities=19% Similarity=0.309 Sum_probs=60.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++.+.+....+|... .++.+.+. ..|+|+-++
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~---------~~l~ell~-----~aDvV~l~~ 208 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ---------VACSELFA-----SSDFILLAL 208 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE---------CCHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee---------CCHHHHHh-----hCCEEEEcC
Confidence 47899999999999999999999999 9999999876666565566421 12333332 257777666
Q ss_pred cChH----HH-HHHHHHhccCCceEEEEc
Q 016363 282 GLTS----VM-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~----~~-~~~~~~l~~~~G~~v~~g 305 (390)
+... .+ ...+..|+++ ..++.++
T Consensus 209 P~t~~t~~li~~~~l~~mk~g-ailIN~a 236 (330)
T 4e5n_A 209 PLNADTLHLVNAELLALVRPG-ALLVNPC 236 (330)
T ss_dssp CCSTTTTTCBCHHHHTTSCTT-EEEEECS
T ss_pred CCCHHHHHHhCHHHHhhCCCC-cEEEECC
Confidence 5321 11 3455666666 6666665
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.011 Score=51.99 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHHH----hcCCcE-E-EcCCCCCCcCHHHHHHhhcC--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGK----KFGITD-F-INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~----~~g~~~-v-~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++++||+|+ |++|...++.+...|+ +|+++ ++++++.+.+. ..+... . +..+-.+..++.+.+.+... +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG 79 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence 357999998 9999999999988999 89988 88877765442 234332 2 22221011222233332221 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 80 ~~d~li~~Ag~ 90 (245)
T 2ph3_A 80 GLDTLVNNAGI 90 (245)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.005 Score=54.77 Aligned_cols=89 Identities=20% Similarity=0.320 Sum_probs=57.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCH--HHHHHhhc---CCCccEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV--SQVIKEMT---DGGADYC 277 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~--~~~i~~~~---~~g~D~v 277 (390)
.++||+|+ |++|.+.++.+...|+ +|+++++++++.+. . + . .|+ .+.+.++. .+++|++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~--~---~---~Dl~~~~~v~~~~~~~~~~id~l 66 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D--L---S---TAEGRKQAIADVLAKCSKGMDGL 66 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C--T---T---SHHHHHHHHHHHHTTCTTCCSEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c--c---c---cCCCCHHHHHHHHHHhCCCCCEE
Confidence 37899998 9999999999988999 99999988765321 0 0 0 111 12233222 2478999
Q ss_pred EEcccChH------------------HHHHHHHHhcc-CCceEEEEccc
Q 016363 278 FECIGLTS------------------VMNDAFNSSRE-GWGKTVILGVE 307 (390)
Q Consensus 278 id~~g~~~------------------~~~~~~~~l~~-~~G~~v~~g~~ 307 (390)
|++.|... ..+.+++.+.. +.|+++.++..
T Consensus 67 v~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~ 115 (257)
T 1fjh_A 67 VLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV 115 (257)
T ss_dssp EECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred EECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence 99988532 13344455543 22899988754
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.017 Score=53.70 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=35.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhhHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG 243 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~~ 243 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++ +++++.+.+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~ 87 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL 87 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence 4688999998 9999999999999999 999999 888776544
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.016 Score=53.60 Aligned_cols=76 Identities=20% Similarity=0.198 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH--HHHHhcCC--c-EEEcCCCCCCcCHHHHHHhhcCC-Ccc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF--EIGKKFGI--T-DFINPATCGDKTVSQVIKEMTDG-GAD 275 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~--~~~~~~g~--~-~v~~~~~~~~~~~~~~i~~~~~~-g~D 275 (390)
+.+|||+|+ |.+|...++.+...|+ +|+++++++++. +.++.++. . .++..+- .+ .+.+.++..+ ++|
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~~~~~d 77 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDL---LE-FSNIIRTIEKVQPD 77 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCT---TC-HHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCC---CC-HHHHHHHHHhcCCC
Confidence 578999998 9999999998888898 999999887653 34444421 1 2221111 11 2233333333 689
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+||++++.
T Consensus 78 ~vih~A~~ 85 (345)
T 2z1m_A 78 EVYNLAAQ 85 (345)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.05 Score=51.23 Aligned_cols=97 Identities=14% Similarity=0.161 Sum_probs=66.9
Q ss_pred HHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC----hhh---------HHHHHhcCCcEEEcCCCCCCcC
Q 016363 196 KVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN----PEK---------FEIGKKFGITDFINPATCGDKT 261 (390)
Q Consensus 196 ~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~----~~~---------~~~~~~~g~~~v~~~~~~~~~~ 261 (390)
+..+ --++.+|+|.|+|..|..+++++..+|+++|+.++++ .++ ..++++... ... ..+
T Consensus 184 ~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~----~~~---~~~ 256 (388)
T 1vl6_A 184 KLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP----ERL---SGD 256 (388)
T ss_dssp HHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT----TCC---CSC
T ss_pred HHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc----cCc---hhh
Confidence 4444 3367899999999999999999999999899999988 544 233333221 011 145
Q ss_pred HHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 262 ~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+.++ ++|++|-+++.....+..++.|+++ -.++.++
T Consensus 257 L~eav~-----~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalS 294 (388)
T 1vl6_A 257 LETALE-----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALA 294 (388)
T ss_dssp HHHHHT-----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECC
T ss_pred HHHHHc-----cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcC
Confidence 666664 5899999888433346778888876 5555554
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0098 Score=53.30 Aligned_cols=81 Identities=19% Similarity=0.234 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+ +..+... .+..+-.+..++.+.+.+... +
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 9999999999999999 9999998 66655433 3335432 222111011223333332221 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 99 ~~d~vi~~Ag~ 109 (274)
T 1ja9_A 99 GLDFVMSNSGM 109 (274)
T ss_dssp CEEEEECCCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.007 Score=54.01 Aligned_cols=73 Identities=21% Similarity=0.194 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE--cCCCCCCcCHHHHHHhhc--CCCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI--NPATCGDKTVSQVIKEMT--DGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~i~~~~--~~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+. . ..+ |-.+ ..++.+.+.+.. -+++|+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~-~~~~~Dl~d--~~~v~~~~~~~~~~~g~iD~ 90 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----F-LAVKCDITD--TEQVEQAYKEIEETHGPVEV 90 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----S-EEEECCTTS--HHHHHHHHHHHHHHTCSCSE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----c-eEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4678999998 9999999999999999 99999988765432 1 222 2222 122333333322 237999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 91 lv~nAg~ 97 (253)
T 2nm0_A 91 LIANAGV 97 (253)
T ss_dssp EEEECSC
T ss_pred EEECCCC
Confidence 9998874
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.035 Score=50.36 Aligned_cols=73 Identities=16% Similarity=0.184 Sum_probs=54.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-|+..+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~advvi~~v~~~ 68 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA--------SSPAEVCA-----ACDITIAMLADP 68 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC--------SCHHHHHH-----HCSEEEECCSSH
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHH-----cCCEEEEEcCCH
Confidence 68899999999998888888898 89999999999988877765321 23444443 368888888876
Q ss_pred HHHHHHH
Q 016363 285 SVMNDAF 291 (390)
Q Consensus 285 ~~~~~~~ 291 (390)
..+...+
T Consensus 69 ~~~~~v~ 75 (287)
T 3pdu_A 69 AAAREVC 75 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4355444
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=96.06 E-value=0.019 Score=51.66 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=62.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
+|||+|+ |.+|...++.+... |. +|+++++++++.+.+...+...+. |..+ .+.+.+... ++|+||.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d------~~~l~~~~~-~~d~vi~~ 73 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ------PESLQKAFA-GVSKLLFI 73 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC------HHHHHHHTT-TCSEEEEC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC------HHHHHHHHh-cCCEEEEc
Confidence 6899998 99999999888877 88 899999998877666554544332 2222 233444433 69999999
Q ss_pred ccCh-------HHHHHHHHHhccCC-ceEEEEccc
Q 016363 281 IGLT-------SVMNDAFNSSREGW-GKTVILGVE 307 (390)
Q Consensus 281 ~g~~-------~~~~~~~~~l~~~~-G~~v~~g~~ 307 (390)
.+.. .....+++.++..+ ++++.++..
T Consensus 74 a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 74 SGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred CCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 8741 12334455555441 478877743
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.01 Score=54.82 Aligned_cols=81 Identities=7% Similarity=0.028 Sum_probs=49.1
Q ss_pred hCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--HHHHHhcC--Cc-EEEcCCCCCCcCHHHHHHhhcC
Q 016363 198 AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFG--IT-DFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 198 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~~g--~~-~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
..-+++.+|||+|+ |.+|...++.+...|. +|+++++++.+ .+.+..+. .. .++..+- .+ .+.+.++..
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~ 83 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDM---AD-ACSVQRAVI 83 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCT---TC-HHHHHHHHH
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCC---CC-HHHHHHHHH
Confidence 34568899999998 9999999998888898 99999987654 22333331 11 2222111 11 223333333
Q ss_pred C-CccEEEEcccC
Q 016363 272 G-GADYCFECIGL 283 (390)
Q Consensus 272 ~-g~D~vid~~g~ 283 (390)
+ ++|+||.+++.
T Consensus 84 ~~~~d~Vih~A~~ 96 (335)
T 1rpn_A 84 KAQPQEVYNLAAQ 96 (335)
T ss_dssp HHCCSEEEECCSC
T ss_pred HcCCCEEEECccc
Confidence 4 68999999874
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.019 Score=49.21 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=67.4
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE--EEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
...+.++.+||-+|+|. |..+..+++. +. +|++++.+++.++.+++.+... ++..+- .++ ...+.+
T Consensus 41 l~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~---~~~------~~~~~~ 108 (218)
T 3ou2_A 41 LRAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL---FDW------TPDRQW 108 (218)
T ss_dssp HTTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT---TSC------CCSSCE
T ss_pred HhcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc---ccC------CCCCce
Confidence 34478889999999864 6677777776 77 9999999999999998766222 222111 111 223489
Q ss_pred cEEEEcccC--------hHHHHHHHHHhccCCceEEEEccc
Q 016363 275 DYCFECIGL--------TSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 275 D~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
|+|+....- ...++.+.+.|+++ |.++.....
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~ 148 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT 148 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence 999864331 23467888999998 998877543
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.03 Score=49.85 Aligned_cols=94 Identities=19% Similarity=0.355 Sum_probs=64.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
++++++||-+|+|. |..++.+++ .|. +|++++.++...+.+++ .+.. .++. .++.+. +..+.+
T Consensus 118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~------~d~~~~---~~~~~f 185 (254)
T 2nxc_A 118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEAA---LPFGPF 185 (254)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHHH---GGGCCE
T ss_pred cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE------CChhhc---CcCCCC
Confidence 68899999999865 777776666 577 99999999998877764 3432 2221 234332 223489
Q ss_pred cEEEEcccCh---HHHHHHHHHhccCCceEEEEcc
Q 016363 275 DYCFECIGLT---SVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 275 D~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
|+|+...... ..+..+.+.|+++ |+++..+.
T Consensus 186 D~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~ 219 (254)
T 2nxc_A 186 DLLVANLYAELHAALAPRYREALVPG-GRALLTGI 219 (254)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CEEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEee
Confidence 9999654222 2356777899998 99987764
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.023 Score=55.38 Aligned_cols=94 Identities=16% Similarity=0.117 Sum_probs=60.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHh-cCCcEE-EcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~-~g~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
++.+|+|+|+|.+|.+++..+... +. +|+++++++++.+.+.+ .+...+ ++..+ . +.+.++.. ++|+||
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d-----~-~~l~~~l~-~~DvVI 93 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD-----D-SALDKVLA-DNDVVI 93 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC-----H-HHHHHHHH-TSSEEE
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC-----H-HHHHHHHc-CCCEEE
Confidence 356899999999999999888877 67 89999999988776643 333222 22222 2 12222221 699999
Q ss_pred EcccChHHHHHHHHHhccCCceEEEE
Q 016363 279 ECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+|++..........++..+ -.++..
T Consensus 94 n~tp~~~~~~v~~a~l~~g-~~vvd~ 118 (467)
T 2axq_A 94 SLIPYTFHPNVVKSAIRTK-TDVVTS 118 (467)
T ss_dssp ECSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred ECCchhhhHHHHHHHHhcC-CEEEEe
Confidence 9999764333444566655 455543
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.016 Score=53.41 Aligned_cols=82 Identities=20% Similarity=0.240 Sum_probs=51.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC------------hhhHHH----HHhcCCcEEE-cCCCCCCcCH
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEI----GKKFGITDFI-NPATCGDKTV 262 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~------------~~~~~~----~~~~g~~~v~-~~~~~~~~~~ 262 (390)
-.|.++||+|+ +++|.+.++.+...|+ +|++++++ +++.+. ++..+....+ ..+-.+..++
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 46789999998 9999999999999999 99998765 344332 2334543322 1111011223
Q ss_pred HHHHHhhcC--CCccEEEEcccC
Q 016363 263 SQVIKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 263 ~~~i~~~~~--~g~D~vid~~g~ 283 (390)
.+.+.+... +++|++|++.|.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 333333222 379999999884
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.017 Score=51.63 Aligned_cols=81 Identities=15% Similarity=0.188 Sum_probs=51.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCCh---hhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCC--
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG-- 272 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~---~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~-- 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++ +..+.+.+ .+....+..+-.+..++.+.+.+....
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4688999986 5999999999988999 999999887 23333322 343233322211112333334433333
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 87 ~iD~lv~~Ag~ 97 (265)
T 1qsg_A 87 KFDGFVHSIGF 97 (265)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.012 Score=52.84 Aligned_cols=83 Identities=16% Similarity=0.096 Sum_probs=51.7
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHHH----hcCCcEE-EcCCCCCCcCHHHHHHhhcC-
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGK----KFGITDF-INPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~----~~g~~~v-~~~~~~~~~~~~~~i~~~~~- 271 (390)
...+.++||+|+ |++|.+.++.+...|+ +|+++ .+++++.+.+. +.+.... +..+-.+..++.+.+.+...
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 345789999998 9999999999999999 78766 77776655442 3343322 22111111223333333222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 102 ~g~id~li~nAg~ 114 (272)
T 4e3z_A 102 FGRLDGLVNNAGI 114 (272)
T ss_dssp HSCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 379999998873
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.011 Score=49.49 Aligned_cols=100 Identities=16% Similarity=0.191 Sum_probs=66.0
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~~~ 269 (390)
....++++++||=+|+|. |..+..+++. +. +|++++.+++..+.+++ .+.+ .++. .+ . ..+...
T Consensus 16 l~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~-----~-~~l~~~ 85 (185)
T 3mti_A 16 LAEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG-----H-ENLDHY 85 (185)
T ss_dssp HHTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC-----G-GGGGGT
T ss_pred HHHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc-----H-HHHHhh
Confidence 345688999999999864 7777778777 66 99999999988777754 3432 2332 21 1 112223
Q ss_pred cCCCccEEEEcccC-----------h----HHHHHHHHHhccCCceEEEEcc
Q 016363 270 TDGGADYCFECIGL-----------T----SVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 270 ~~~g~D~vid~~g~-----------~----~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
.++.+|+|+...+- . ..+..+.+.|+++ |+++.+..
T Consensus 86 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 136 (185)
T 3mti_A 86 VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY 136 (185)
T ss_dssp CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 33479999865321 1 1347788999999 99987653
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.02 Score=50.29 Aligned_cols=73 Identities=18% Similarity=0.070 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+.+|||+|+ |.+|...++.+... |. +|+++++++++.+.+ .-+...+. |..+ .+.+.++.. ++|+|
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d------~~~~~~~~~-~~d~v 73 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD------ADSINPAFQ-GIDAL 73 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS------HHHHHHHHT-TCSEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC------HHHHHHHHc-CCCEE
Confidence 4678999998 99999999988888 78 999999988776543 11222222 2221 233444333 69999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.+.
T Consensus 74 i~~a~~ 79 (253)
T 1xq6_A 74 VILTSA 79 (253)
T ss_dssp EECCCC
T ss_pred EEeccc
Confidence 998873
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.00 E-value=0.03 Score=52.65 Aligned_cols=49 Identities=24% Similarity=0.322 Sum_probs=41.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT 249 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~ 249 (390)
--.|.+|+|+|.|.+|..+++.+...|+ +|++.++++++.+.+ ++++++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~ 219 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD 219 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence 3578999999999999999999999999 899999998887644 446653
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.019 Score=53.15 Aligned_cols=79 Identities=19% Similarity=0.185 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC---------ChhhHHH----HHhcCCcEEEcCCCCCCcCHHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI---------NPEKFEI----GKKFGITDFINPATCGDKTVSQVIK 267 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~---------~~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~i~ 267 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+. ++..+...+.|..+ ..++.+.+.
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~--~~~~~~~~~ 84 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK 84 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC--HHHHHHHHH
Confidence 4788999998 9999999999989999 8998653 4554433 23345444555544 122333333
Q ss_pred hhc--CCCccEEEEcccC
Q 016363 268 EMT--DGGADYCFECIGL 283 (390)
Q Consensus 268 ~~~--~~g~D~vid~~g~ 283 (390)
+.. -+++|++|++.|.
T Consensus 85 ~~~~~~g~iD~lVnnAG~ 102 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGI 102 (319)
T ss_dssp HHHHHTSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 222 2379999999883
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.017 Score=51.98 Aligned_cols=91 Identities=16% Similarity=0.167 Sum_probs=63.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
.+|||+|+|.+|...+..+...|. +|+++++++.+.+.+...+.+.+.. +- .++. -.++|+||.+.+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-D~---~d~~-------~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLW-PG---EEPS-------LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEES-SS---SCCC-------CTTCCEEEECCCC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEe-cc---cccc-------cCCCCEEEECCCc
Confidence 589999999999999999988899 9999999999888777666544432 11 1211 2379999999874
Q ss_pred h----HHHHHHHHHhcc--C-CceEEEEcc
Q 016363 284 T----SVMNDAFNSSRE--G-WGKTVILGV 306 (390)
Q Consensus 284 ~----~~~~~~~~~l~~--~-~G~~v~~g~ 306 (390)
. .....+++.++. . -.+++.++.
T Consensus 74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 74 DSGGDPVLAALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence 3 123444555443 1 157777663
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.04 Score=55.62 Aligned_cols=102 Identities=16% Similarity=0.136 Sum_probs=64.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh---------hhHH----HHHhcCCcEEEcCCCCCCcCHHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP---------EKFE----IGKKFGITDFINPATCGDKTVSQVIK 267 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~---------~~~~----~~~~~g~~~v~~~~~~~~~~~~~~i~ 267 (390)
.|+++||+|+ +++|.+.++.+...|+ +|++++++. ++.+ .++..|...+.+..+ ..+..+.+.
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d--~~~~~~~v~ 83 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNN--VLDGDKIVE 83 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCC--TTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCC--HHHHHHHHH
Confidence 4678999998 9999999999999999 999987654 3333 233345545555544 122333333
Q ss_pred hhcC--CCccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcc
Q 016363 268 EMTD--GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV 306 (390)
Q Consensus 268 ~~~~--~g~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~ 306 (390)
+... |.+|+++++.|... ..+.++..|+. ++|+||.++.
T Consensus 84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS 150 (604)
T 2et6_A 84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS 150 (604)
T ss_dssp HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 2222 37999999988411 23455566643 2389999875
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=95.94 E-value=0.062 Score=49.39 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=51.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC---hhhHHHHH-hc----CCc-EEEcCCCCCCcCH-HHHHHhhcC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---PEKFEIGK-KF----GIT-DFINPATCGDKTV-SQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~---~~~~~~~~-~~----g~~-~v~~~~~~~~~~~-~~~i~~~~~ 271 (390)
.+.++||+|+|++|.+++..+...|+++|+++.|+ .+|.+.+. ++ +.. .++...+ .++ .+.+.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~---l~~~~~~l~---- 219 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD---QHAFTEALA---- 219 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC---HHHHHHHHH----
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh---hhhhHhhcc----
Confidence 57899999999999999999999999889999999 65554442 22 222 2333322 111 22222
Q ss_pred CCccEEEEcccCh
Q 016363 272 GGADYCFECIGLT 284 (390)
Q Consensus 272 ~g~D~vid~~g~~ 284 (390)
.+|+||+|++..
T Consensus 220 -~~DiIINaTp~G 231 (312)
T 3t4e_A 220 -SADILTNGTKVG 231 (312)
T ss_dssp -HCSEEEECSSTT
T ss_pred -CceEEEECCcCC
Confidence 489999998854
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=95.94 E-value=0.014 Score=51.33 Aligned_cols=80 Identities=16% Similarity=0.185 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-ecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~-~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
|.+|||+|+ |++|...++.+...|+ +|++ ..+++++.+.+ +..+... .+..+-.+..++.+.+.+.. -++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 468999998 9999999999999999 8888 47887765543 2234332 22111101122333333222 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 80 id~li~~Ag~ 89 (244)
T 1edo_A 80 IDVVVNNAGI 89 (244)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999998873
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.015 Score=51.10 Aligned_cols=81 Identities=15% Similarity=0.116 Sum_probs=51.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCC------eEEEecCChhhHHHHHh-c---CCcE-EEcCCCCCCcCHHHHHHhhc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRAS------KIIGVDINPEKFEIGKK-F---GITD-FINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~------~Vi~~~~~~~~~~~~~~-~---g~~~-v~~~~~~~~~~~~~~i~~~~ 270 (390)
+.+|||+|+ |++|.+.++.+...|+. +|+++++++++.+.+.+ + +... .+..+-.+...+.+.+.+..
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 568999998 99999999888888875 79999999877665432 2 3322 22211101122333333222
Q ss_pred --CCCccEEEEcccC
Q 016363 271 --DGGADYCFECIGL 283 (390)
Q Consensus 271 --~~g~D~vid~~g~ 283 (390)
-+++|++|++.|.
T Consensus 82 ~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHTSCCSEEEECCCC
T ss_pred HhCCCCCEEEEcCCc
Confidence 1379999999873
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.046 Score=51.36 Aligned_cols=134 Identities=18% Similarity=0.189 Sum_probs=82.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHc-CCCeEEEe-cCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGLGAVGLAVAEGARLN-RASKIIGV-DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
-+|.|+|+|.+|...+..++.. ++ +++++ ++++++.+.++++|... + .++.+.+.+ ..+|+|+.|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~~---~-----~~~~~ll~~---~~~D~V~i~t 73 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLKI---Y-----ESYEAVLAD---EKVDAVLIAT 73 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCCB---C-----SCHHHHHHC---TTCCEEEECS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCce---e-----CCHHHHhcC---CCCCEEEEcC
Confidence 3689999999999888877766 66 67654 77888877777777531 2 245444432 3799999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccCCCCCccc-chHhhhc--ceeEEeeecCCCCchhhHHHHHHHHHcCCCC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN 353 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (390)
+.....+.+..+|.. |+-|++.-+.....-.. ......+ ++.+.-.. .......+..+.+++++|.+-
T Consensus 74 p~~~h~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG 144 (359)
T 3e18_A 74 PNDSHKELAISALEA--GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ--NRRWDEDFLIIKEMFEQKTIG 144 (359)
T ss_dssp CGGGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHHTTTS
T ss_pred CcHHHHHHHHHHHHC--CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--eeccCHHHHHHHHHHHcCCCC
Confidence 988867788888885 56566653221110000 0111112 34332221 222345678888888888653
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.023 Score=51.13 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=60.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
+|||+|+ |.+|...++.+... |. +|+++++++++.+.+...+...+. |..+ .+.+.+... ++|+||.+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d------~~~~~~~~~-~~d~vi~~ 72 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGD------EAALTSALQ-GVEKLLLI 72 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTC------HHHHHHHTT-TCSEEEEC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCC------HHHHHHHHh-CCCEEEEe
Confidence 4899998 99999999988877 88 899999998877666554544332 2222 233444433 69999999
Q ss_pred ccCh-----HHHHHHHHHhccCC-ceEEEEccc
Q 016363 281 IGLT-----SVMNDAFNSSREGW-GKTVILGVE 307 (390)
Q Consensus 281 ~g~~-----~~~~~~~~~l~~~~-G~~v~~g~~ 307 (390)
.+.. .....+++.+...+ ++++.++..
T Consensus 73 a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~ 105 (286)
T 2zcu_A 73 SSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLL 105 (286)
T ss_dssp C--------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred CCCCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 8742 12344455554431 578877753
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.013 Score=51.50 Aligned_cols=103 Identities=21% Similarity=0.209 Sum_probs=68.6
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhc
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
.....++++||-+|+| .|..++.+++.+ +. +|++++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 67 l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~l~~l~ 141 (232)
T 3cbg_A 67 LISLTGAKQVLEIGVF-RGYSALAMALQLPPDG-QIIACDQDPNATAIAKKYWQKAGVAEKISLRL---GPALATLEQLT 141 (232)
T ss_dssp HHHHHTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHHHHHH
T ss_pred HHHhcCCCEEEEecCC-CCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHH
Confidence 3445677899999987 788888999876 45 99999999998877754 34321111111 24444454443
Q ss_pred C----CCccEEEEcccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 271 D----GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 271 ~----~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
. +.+|+||-.... ...++.+.+.|+++ |.++.-.
T Consensus 142 ~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~ 182 (232)
T 3cbg_A 142 QGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDN 182 (232)
T ss_dssp TSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEEC
T ss_pred hcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeC
Confidence 2 479999843322 22467888999998 9987643
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=95.92 E-value=0.035 Score=51.61 Aligned_cols=88 Identities=20% Similarity=0.248 Sum_probs=60.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++++.+.+.++|.... ++.+.+. ..|+|+.++
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---------~l~e~l~-----~aDvVi~~v 218 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV---------STPELAA-----QSDFIVVAC 218 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC---------CHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC---------CHHHHHh-----hCCEEEEeC
Confidence 47799999999999999999999999 89999988776666655554221 2333332 368888877
Q ss_pred cChH----HH-HHHHHHhccCCceEEEEc
Q 016363 282 GLTS----VM-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~----~~-~~~~~~l~~~~G~~v~~g 305 (390)
+... .+ ...+..++++ ..++.++
T Consensus 219 p~~~~t~~~i~~~~~~~mk~g-ailIn~s 246 (330)
T 2gcg_A 219 SLTPATEGLCNKDFFQKMKET-AVFINIS 246 (330)
T ss_dssp CCCTTTTTCBSHHHHHHSCTT-CEEEECS
T ss_pred CCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence 6432 11 3455667766 6666555
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.016 Score=51.89 Aligned_cols=84 Identities=14% Similarity=0.196 Sum_probs=53.2
Q ss_pred CCCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhhc-
Q 016363 199 GVEVGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMT- 270 (390)
Q Consensus 199 ~~~~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~- 270 (390)
...++++|||+|+ +++|.+.++.+...|+ +|++++++++..+.++ +.+...++..+-.+..++.+.+.+..
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 3457899999984 6899999999989999 9999988865444443 23432333222211122333333322
Q ss_pred -CCCccEEEEcccC
Q 016363 271 -DGGADYCFECIGL 283 (390)
Q Consensus 271 -~~g~D~vid~~g~ 283 (390)
.+++|++|++.|.
T Consensus 89 ~~g~id~lv~nAg~ 102 (271)
T 3ek2_A 89 HWDSLDGLVHSIGF 102 (271)
T ss_dssp HCSCEEEEEECCCC
T ss_pred HcCCCCEEEECCcc
Confidence 2379999998874
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.013 Score=52.13 Aligned_cols=79 Identities=10% Similarity=0.113 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH---cCCCeEEEecCChhhHHHHH-hc-----CCcE-EE--cCCCCCCcCHHHHHHh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARL---NRASKIIGVDINPEKFEIGK-KF-----GITD-FI--NPATCGDKTVSQVIKE 268 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~---~g~~~Vi~~~~~~~~~~~~~-~~-----g~~~-v~--~~~~~~~~~~~~~i~~ 268 (390)
.+.++||+|+ |++|.+.++.+.. .|+ +|+++++++++.+.+. ++ +... .+ |-.+ ..++.+.+.+
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~ 81 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT--EAGVQRLLSA 81 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS--HHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC--HHHHHHHHHH
Confidence 4678999998 9999998888777 899 9999999988765443 22 3222 22 2222 1233333333
Q ss_pred hcC----CCcc--EEEEcccC
Q 016363 269 MTD----GGAD--YCFECIGL 283 (390)
Q Consensus 269 ~~~----~g~D--~vid~~g~ 283 (390)
... +++| +++++.|.
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCC
T ss_pred HHhccccccCCccEEEECCcc
Confidence 322 3678 99998773
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.025 Score=51.49 Aligned_cols=36 Identities=31% Similarity=0.315 Sum_probs=32.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
...+|+|+|+|++|..+++.+...|..++..++...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 457999999999999999999999998999998654
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.057 Score=49.61 Aligned_cols=74 Identities=18% Similarity=0.274 Sum_probs=55.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
.+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|... . .+..+.+. .+|+||.|+..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~-----~~~~~~~~-----~~DvVi~av~~ 96 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---G-----RTPAEVVS-----TCDITFACVSD 96 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---C-----SCHHHHHH-----HCSEEEECCSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---c-----CCHHHHHh-----cCCEEEEeCCC
Confidence 579999999999999888888898 8999999999988887766421 1 13333332 47899999986
Q ss_pred hHHHHHHH
Q 016363 284 TSVMNDAF 291 (390)
Q Consensus 284 ~~~~~~~~ 291 (390)
+......+
T Consensus 97 ~~~~~~v~ 104 (316)
T 2uyy_A 97 PKAAKDLV 104 (316)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55455554
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.017 Score=53.44 Aligned_cols=77 Identities=16% Similarity=0.107 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHH----HHh-cCCc-EEEcCCCCCCcCHHHHHHhhcC-CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKK-FGIT-DFINPATCGDKTVSQVIKEMTD-GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~-~g 273 (390)
.+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+. +.. .+.. .++..+- .+ .+.+.++.. ++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~~~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDV---SD-ERALARIFDAHP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT---TC-HHHHHHHHHHSC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeec---CC-HHHHHHHHhccC
Confidence 4578999998 9999999999999999 99999987654322 221 1222 2232221 11 223333332 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+||++.+.
T Consensus 79 ~d~vih~A~~ 88 (341)
T 3enk_A 79 ITAAIHFAAL 88 (341)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECccc
Confidence 9999999875
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.021 Score=51.49 Aligned_cols=100 Identities=11% Similarity=0.093 Sum_probs=67.6
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHhc-----CCcEE-EcCCCCCCcCHHHHH
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKF-----GITDF-INPATCGDKTVSQVI 266 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~~-----g~~~v-~~~~~~~~~~~~~~i 266 (390)
.....++++++||-+|+| .|..+..+++.. +. +|++++.+++..+.+++. |.+.+ +... ++.+
T Consensus 103 ~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~-----d~~~-- 173 (275)
T 1yb2_A 103 IMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-----DIAD-- 173 (275)
T ss_dssp ---CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-----CTTT--
T ss_pred HHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC-----chhc--
Confidence 356678999999999987 577777888774 45 999999999988877652 43221 1111 2211
Q ss_pred HhhcCCCccEEEEcccCh-HHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+..+.+|+|+...... ..+..+.+.|+++ |+++...
T Consensus 174 -~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 211 (275)
T 1yb2_A 174 -FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL 211 (275)
T ss_dssp -CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred -cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEe
Confidence 11223799999766544 3478889999998 9988765
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.021 Score=51.04 Aligned_cols=81 Identities=17% Similarity=0.296 Sum_probs=50.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChh---hHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~---~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++++++ ..+.+.+ .+....+..+-.+..++.+.+.+... +
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999986 5999999998888899 9999998875 3333322 34323332221011223333332222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 86 ~iD~lv~~Ag~ 96 (261)
T 2wyu_A 86 GLDYLVHAIAF 96 (261)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.0059 Score=54.72 Aligned_cols=75 Identities=15% Similarity=0.224 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE--cCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI--NPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.. .. ..+ |-.+ ..++.+.+.+... +++|+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~-~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD~ 99 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DI-HTVAGDISK--PETADRIVREGIERFGRIDS 99 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TE-EEEESCTTS--HHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ce-EEEEccCCC--HHHHHHHHHHHHHHCCCCCE
Confidence 5689999998 9999999999999999 999999886653221 11 122 2222 1223333332222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 100 lv~nAg~ 106 (260)
T 3un1_A 100 LVNNAGV 106 (260)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999874
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.056 Score=49.20 Aligned_cols=93 Identities=13% Similarity=0.078 Sum_probs=58.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-----hhhHHHHHh---cCCcEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-----PEKFEIGKK---FGITDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-----~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
..+|||+|+ |.+|...++.+...|. +|++++++ +++.+.++. .+.. ++..+- .+ .+.+.+... +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~---~d-~~~l~~~~~-~ 76 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASL---DD-HQRLVDALK-Q 76 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCS---SC-HHHHHHHHT-T
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCC---CC-HHHHHHHHh-C
Confidence 357999998 9999999999888898 89999998 445444433 2433 332211 11 233443333 6
Q ss_pred ccEEEEcccCh------HHHHHHHHHhccCC--ceEE
Q 016363 274 ADYCFECIGLT------SVMNDAFNSSREGW--GKTV 302 (390)
Q Consensus 274 ~D~vid~~g~~------~~~~~~~~~l~~~~--G~~v 302 (390)
+|+||.+++.. .....+++.++..+ .+++
T Consensus 77 ~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 77 VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred CCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 99999998753 12345556555541 3666
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.082 Score=48.41 Aligned_cols=88 Identities=14% Similarity=0.089 Sum_probs=63.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-+++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~e~~~-----~aDvVi~~vp 74 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC--------ESVKAALS-----ASPATIFVLL 74 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC--------SSHHHHHH-----HSSEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEEeC
Confidence 4579999999999999999888999 89999999999988877775321 23444443 3789999998
Q ss_pred ChHHHHHHH-----HHhccCCceEEEEc
Q 016363 283 LTSVMNDAF-----NSSREGWGKTVILG 305 (390)
Q Consensus 283 ~~~~~~~~~-----~~l~~~~G~~v~~g 305 (390)
.+......+ ..+.++ ..++.++
T Consensus 75 ~~~~~~~v~~~~~l~~~~~g-~ivid~s 101 (306)
T 3l6d_A 75 DNHATHEVLGMPGVARALAH-RTIVDYT 101 (306)
T ss_dssp SHHHHHHHHTSTTHHHHTTT-CEEEECC
T ss_pred CHHHHHHHhcccchhhccCC-CEEEECC
Confidence 765444433 234444 4555554
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=95.82 E-value=0.019 Score=50.74 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+ +..+.+.. +..+-.+..++.+.+.+... +
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999999999 8888766 44544433 33454332 22211011223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 82 ~id~lv~nAg~ 92 (246)
T 3osu_A 82 SLDVLVNNAGI 92 (246)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.027 Score=51.09 Aligned_cols=90 Identities=10% Similarity=-0.059 Sum_probs=59.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCC---cEEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI---TDFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~---~~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+.+++|+|+|++|.+++..+...|+++|+++.|++++.+.+ ++++. -.+....+ +. ..+|+|
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------------l~-~~aDiI 191 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------------LK-QSYDVI 191 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CC-SCEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------------hc-CCCCEE
Confidence 688999999999999999988889977999999999886655 33432 12332221 11 379999
Q ss_pred EEcccChHHHHH---HHHHhccCCceEEEEc
Q 016363 278 FECIGLTSVMND---AFNSSREGWGKTVILG 305 (390)
Q Consensus 278 id~~g~~~~~~~---~~~~l~~~~G~~v~~g 305 (390)
|++++....-+. ....++++ ..++++.
T Consensus 192 InaTp~gm~~~~~~l~~~~l~~~-~~V~Dlv 221 (281)
T 3o8q_A 192 INSTSASLDGELPAIDPVIFSSR-SVCYDMM 221 (281)
T ss_dssp EECSCCCC----CSCCGGGEEEE-EEEEESC
T ss_pred EEcCcCCCCCCCCCCCHHHhCcC-CEEEEec
Confidence 999986541111 12345554 4455554
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.019 Score=51.63 Aligned_cols=81 Identities=10% Similarity=0.158 Sum_probs=50.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChh---hHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGKK-FGITDFINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~---~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++++++ ..+.+.+ .+...++..+-.+..++.+.+.+.. -+
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999986 6999999999998999 9999998875 3333332 3422222222101122333333222 23
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 84 ~id~lv~nAg~ 94 (275)
T 2pd4_A 84 SLDFIVHSVAF 94 (275)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999874
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.042 Score=50.80 Aligned_cols=73 Identities=16% Similarity=0.255 Sum_probs=46.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcC-HHHHHHhhcCCCccEEEEcc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT-VSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~~i~~~~~~g~D~vid~~ 281 (390)
+|||+|+ |.+|...++.+... |. +|+++++++++.+.+.....-.++..+-.+..+ +.+.+. ++|+||.++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A 75 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLV 75 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECB
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEcc
Confidence 6999998 99999999988887 88 999999988765433221111222221100112 222222 689999987
Q ss_pred cC
Q 016363 282 GL 283 (390)
Q Consensus 282 g~ 283 (390)
+.
T Consensus 76 ~~ 77 (345)
T 2bll_A 76 AI 77 (345)
T ss_dssp CC
T ss_pred cc
Confidence 73
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.027 Score=50.77 Aligned_cols=94 Identities=18% Similarity=0.249 Sum_probs=65.0
Q ss_pred ccccchhhHHHHHHHHhCC-CCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC
Q 016363 182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Gag-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 259 (390)
.+||+...++..+ +..+. -.|.+++|+|.| .+|..+++++...|+ +|+...+. .
T Consensus 140 ~~PcTp~gv~~lL-~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~-------------------t--- 195 (285)
T 3l07_A 140 LESCTPKGIMTML-REYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRF-------------------T--- 195 (285)
T ss_dssp CCCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT-------------------C---
T ss_pred CCCCCHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCC-------------------c---
Confidence 4555544444434 44443 489999999985 589999999999999 88777532 1
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+||.++|.+..+ -.+.++++ ..++.+|..
T Consensus 196 ~~L~~~~~-----~ADIVI~Avg~p~~I--~~~~vk~G-avVIDvgi~ 235 (285)
T 3l07_A 196 TDLKSHTT-----KADILIVAVGKPNFI--TADMVKEG-AVVIDVGIN 235 (285)
T ss_dssp SSHHHHHT-----TCSEEEECCCCTTCB--CGGGSCTT-CEEEECCCE
T ss_pred hhHHHhcc-----cCCEEEECCCCCCCC--CHHHcCCC-cEEEEeccc
Confidence 24444443 589999999977522 23567777 788888854
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=95.80 E-value=0.018 Score=50.24 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=69.0
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CCcEEEcCCCCCCcCHHHHHHhh
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.+...+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++. +.-.++.. ++.+.+ .
T Consensus 62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~------d~~~~~--~ 130 (231)
T 1vbf_A 62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILG------DGTLGY--E 130 (231)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEES------CGGGCC--G
T ss_pred HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEEC------Cccccc--c
Confidence 34667889999999999975 77888888764 5 999999999988888653 21122221 221111 0
Q ss_pred cCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.+|+|+....-......+.+.|+++ |+++..-
T Consensus 131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~ 165 (231)
T 1vbf_A 131 EEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPI 165 (231)
T ss_dssp GGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred cCCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEE
Confidence 1237999997665544456788999998 9887664
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=95.79 E-value=0.041 Score=51.29 Aligned_cols=78 Identities=21% Similarity=0.196 Sum_probs=52.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHh-cCC-c-EEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK-FGI-T-DFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~-~g~-~-~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
-.+.+|||+|+ |.+|...++.+... |..+|+++++++.+.+.+.. +.. . ..+..+- .+ .+.+.++.. ++|
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl---~d-~~~l~~~~~-~~D 93 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDV---RD-LERLNYALE-GVD 93 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCT---TC-HHHHHHHTT-TCS
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCC---CC-HHHHHHHHh-cCC
Confidence 45789999998 99999999888877 86689999999887765543 321 1 2222111 11 233444433 799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+||.+++.
T Consensus 94 ~Vih~Aa~ 101 (344)
T 2gn4_A 94 ICIHAAAL 101 (344)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999875
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.021 Score=51.65 Aligned_cols=81 Identities=17% Similarity=0.209 Sum_probs=50.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChh---hHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGKK-FGITDFINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~---~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++++++ ..+.+.+ .+....+..+-.+..++.+.+.+.. -+
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999986 5999999998888999 9999998875 2333322 3422222221101122333333222 23
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 99 ~iD~lv~~Ag~ 109 (285)
T 2p91_A 99 SLDIIVHSIAY 109 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.038 Score=50.46 Aligned_cols=92 Identities=12% Similarity=0.081 Sum_probs=59.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.+|||+|+ |.+|...++.+...|. +|+++++++.+.+ +. +.. ++..+ -. .+.+.++.. ++|+||.+++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~~D----l~-~~~~~~~~~-~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRVSD----YT-LEDLINQLN-DVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEECC----CC-HHHHHHHTT-TCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEEcc----cc-HHHHHHhhc-CCCEEEEccc
Confidence 58999998 9999999999999999 9999999865554 43 332 23222 24 556666554 8999999987
Q ss_pred ChH-------------HHHHHHHHhccCC-ceEEEEcc
Q 016363 283 LTS-------------VMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 283 ~~~-------------~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
... ....+++.++..+ .+++.++.
T Consensus 72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 72 TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp CCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 521 1234445554431 46777764
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.076 Score=48.89 Aligned_cols=89 Identities=22% Similarity=0.272 Sum_probs=62.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHH-HHHhhcCCCccEEEEc
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQ-VIKEMTDGGADYCFEC 280 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~-~i~~~~~~g~D~vid~ 280 (390)
.+|.|+|+|.+|.+.++.++..|.. +|++.++++++.+.+.++|.. ..... ..+ .+ ..+|+||-|
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~-------~~~~~~-----~~aDvVila 101 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS-------IAKVED-----FSPDFVMLS 101 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC-------TTGGGG-----GCCSEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCC-------HHHHhh-----ccCCEEEEe
Confidence 6899999999999999999988864 799999999999999888853 22221 111 11 268999999
Q ss_pred ccChHH---HHHHHHHhccCCceEEEEc
Q 016363 281 IGLTSV---MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 281 ~g~~~~---~~~~~~~l~~~~G~~v~~g 305 (390)
+..... +..+...++++ ..++.++
T Consensus 102 vp~~~~~~vl~~l~~~l~~~-~iv~d~~ 128 (314)
T 3ggo_A 102 SPVRTFREIAKKLSYILSED-ATVTDQG 128 (314)
T ss_dssp SCGGGHHHHHHHHHHHSCTT-CEEEECC
T ss_pred CCHHHHHHHHHHHhhccCCC-cEEEECC
Confidence 987552 22334455555 5555554
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.022 Score=50.39 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=31.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFE 241 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~ 241 (390)
.++++||+|+ +++|.+.++.+...|+ +|+++ .+++++.+
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~ 46 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAE 46 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHH
Confidence 5789999998 9999999999999999 88775 55555544
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=95.73 E-value=0.016 Score=50.58 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC------CeEEEecCChhhHHHHHhc----C-------CcEEEcCCCCCCcC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRA------SKIIGVDINPEKFEIGKKF----G-------ITDFINPATCGDKT 261 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~------~~Vi~~~~~~~~~~~~~~~----g-------~~~v~~~~~~~~~~ 261 (390)
.++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++. + .-.++.. +
T Consensus 81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~------d 153 (227)
T 1r18_A 81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG------D 153 (227)
T ss_dssp TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES------C
T ss_pred hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC------C
Confidence 588999999999975 8888888887652 3899999999887776542 2 1122221 1
Q ss_pred HHHHHHhhcC-CCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 262 VSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 262 ~~~~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
..+ .+.. +.+|+|+...........+.+.|+++ |+++..
T Consensus 154 ~~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 193 (227)
T 1r18_A 154 GRK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP 193 (227)
T ss_dssp GGG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred ccc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEE
Confidence 211 1122 37999997776655568889999998 888754
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.028 Score=46.96 Aligned_cols=99 Identities=14% Similarity=0.190 Sum_probs=68.1
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC-c--EEEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-T--DFINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~-~--~v~~~~~~~~~~~~~~i 266 (390)
+.....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ .+. + .++. .++.+.+
T Consensus 25 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~------~d~~~~~ 95 (192)
T 1l3i_A 25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME------GDAPEAL 95 (192)
T ss_dssp HHHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE------SCHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEe------cCHHHhc
Confidence 34567889999999999976 77777777766 5 99999999988877754 343 1 1221 2343322
Q ss_pred HhhcC-CCccEEEEcccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTD-GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~-~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.. +.+|+|+..... ...+..+.+.|+++ |.++...
T Consensus 96 ---~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~ 134 (192)
T 1l3i_A 96 ---CKIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA 134 (192)
T ss_dssp ---TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred ---ccCCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 22 379999965442 23467778889998 8887653
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.059 Score=51.54 Aligned_cols=97 Identities=15% Similarity=0.084 Sum_probs=62.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC--CeEEEecCChhhHHHHHh-cCC-----cEEEcCCCCCCcCHHHHHHhhcCC-Cc
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRA--SKIIGVDINPEKFEIGKK-FGI-----TDFINPATCGDKTVSQVIKEMTDG-GA 274 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~--~~Vi~~~~~~~~~~~~~~-~g~-----~~v~~~~~~~~~~~~~~i~~~~~~-g~ 274 (390)
.+|+|+|+|.+|..+++.+...|. .+|++.++++++.+.+.+ ++. -..+..+- .+ .+.+.++..+ ++
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~---~d-~~~l~~~l~~~~~ 77 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDA---DS-IEELVALINEVKP 77 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCT---TC-HHHHHHHHHHHCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecC---CC-HHHHHHHHHhhCC
Confidence 379999999999999998887773 389999999988765533 321 12221111 11 2233333333 69
Q ss_pred cEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 275 DYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 275 D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
|+||++++.......+..++..+ -.++.+.
T Consensus 78 DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a 107 (405)
T 4ina_A 78 QIVLNIALPYQDLTIMEACLRTG-VPYLDTA 107 (405)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHT-CCEEESS
T ss_pred CEEEECCCcccChHHHHHHHHhC-CCEEEec
Confidence 99999998655455566677766 6666554
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.043 Score=51.62 Aligned_cols=87 Identities=26% Similarity=0.389 Sum_probs=57.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.+++. +.+.+...|+.. .++.+.+. ..|+|+-++
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~---------~~l~ell~-----~aDvV~l~~ 238 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP---------ASLEDVLT-----KSDFIFVVA 238 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE---------CCHHHHHH-----SCSEEEECS
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee---------CCHHHHHh-----cCCEEEEcC
Confidence 37899999999999999999999999 999999875 334444555421 12333332 366666655
Q ss_pred cChHH----H-HHHHHHhccCCceEEEEc
Q 016363 282 GLTSV----M-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~----~-~~~~~~l~~~~G~~v~~g 305 (390)
+.... + ...+..|+++ ..++.++
T Consensus 239 Plt~~T~~li~~~~l~~mk~g-ailIN~a 266 (365)
T 4hy3_A 239 AVTSENKRFLGAEAFSSMRRG-AAFILLS 266 (365)
T ss_dssp CSSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred cCCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence 53210 1 3455566666 6666665
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.049 Score=53.78 Aligned_cols=81 Identities=16% Similarity=0.160 Sum_probs=52.6
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-------HHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhc
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FEIGKKFGITDFI-NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-------~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~ 270 (390)
++++.++||+|+ |++|...+..+...|+++|+.++++... .+.++..|....+ ..+-.+...+.+.+.+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-- 333 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-- 333 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--
Confidence 568899999998 9999999988888898678999887632 1233445644322 1111001122222322
Q ss_pred CCCccEEEEcccC
Q 016363 271 DGGADYCFECIGL 283 (390)
Q Consensus 271 ~~g~D~vid~~g~ 283 (390)
+++|+||++.|.
T Consensus 334 -~~ld~VVh~AGv 345 (511)
T 2z5l_A 334 -YPPNAVFHTAGI 345 (511)
T ss_dssp -SCCSEEEECCCC
T ss_pred -CCCcEEEECCcc
Confidence 479999999884
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=95.68 E-value=0.013 Score=51.53 Aligned_cols=98 Identities=17% Similarity=0.181 Sum_probs=67.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC----CcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
..+|.+||-+|+| .|..+..+++..+. +|++++.+++-++.+++.. ....+.. .++.+.+..+..+.||
T Consensus 58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~-----~~a~~~~~~~~~~~FD 130 (236)
T 3orh_A 58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK-----GLWEDVAPTLPDGHFD 130 (236)
T ss_dssp TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE-----SCHHHHGGGSCTTCEE
T ss_pred ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe-----ehHHhhcccccccCCc
Confidence 5789999999987 47777778776666 8999999999888887632 2222211 2344444444444899
Q ss_pred EEE-EcccCh----------HHHHHHHHHhccCCceEEEEc
Q 016363 276 YCF-ECIGLT----------SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 276 ~vi-d~~g~~----------~~~~~~~~~l~~~~G~~v~~g 305 (390)
.|+ |++... ..++.+.+.|+++ |+++.+.
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~ 170 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN 170 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred eEEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence 984 655431 1356788999999 9998653
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.095 Score=47.62 Aligned_cols=87 Identities=15% Similarity=0.227 Sum_probs=60.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
.+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|.. + . .++.+.+. .+|+||-|++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~-----~~~~~~~~-----~~D~vi~~vp~ 70 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ-A--C-----ENNQKVAA-----ASDIIFTSLPN 70 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE-E--C-----SSHHHHHH-----HCSEEEECCSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe-e--c-----CCHHHHHh-----CCCEEEEECCC
Confidence 479999999999998888888898 899999999988877765542 1 1 13434343 37899999876
Q ss_pred hHHHHHHH-------HHhccCCceEEEEc
Q 016363 284 TSVMNDAF-------NSSREGWGKTVILG 305 (390)
Q Consensus 284 ~~~~~~~~-------~~l~~~~G~~v~~g 305 (390)
+......+ ..++++ ..++.++
T Consensus 71 ~~~~~~v~~~~~~l~~~l~~~-~~vv~~~ 98 (301)
T 3cky_A 71 AGIVETVMNGPGGVLSACKAG-TVIVDMS 98 (301)
T ss_dssp HHHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred HHHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence 65454444 345544 4455443
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.026 Score=49.02 Aligned_cols=97 Identities=16% Similarity=0.147 Sum_probs=66.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCC------c-EEEcCCCCCCcCHHHHH
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGI------T-DFINPATCGDKTVSQVI 266 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~------~-~v~~~~~~~~~~~~~~i 266 (390)
.++++++||-+|+|. |..+..+++..|. .+|++++.++...+.+++ .+. . .++.. +..+..
T Consensus 74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~------d~~~~~ 146 (226)
T 1i1n_A 74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG------DGRMGY 146 (226)
T ss_dssp TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES------CGGGCC
T ss_pred hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC------CcccCc
Confidence 378999999999975 8888888887763 299999999998877753 221 1 22221 111100
Q ss_pred HhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
...+.+|+|+....-...+..+.+.|+++ |+++..-
T Consensus 147 --~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~ 182 (226)
T 1i1n_A 147 --AEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPV 182 (226)
T ss_dssp --GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred --ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence 11237999997666555568889999998 9887653
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.069 Score=48.07 Aligned_cols=92 Identities=12% Similarity=0.046 Sum_probs=62.6
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+...+.+++|+|+|+.|.+++..+...|+++|+++.|+.+|.+.+ ++++.+ .. . + . ....+|+
T Consensus 114 ~~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~-~-~-----~-------~~~~~Di 178 (271)
T 1npy_A 114 YHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YI-N-S-----L-------ENQQADI 178 (271)
T ss_dssp TTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EE-S-C-----C-------TTCCCSE
T ss_pred hCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cc-h-h-----h-------hcccCCE
Confidence 3444678999999999999999989999987899999998886554 456641 11 0 1 1 0126999
Q ss_pred EEEcccChHHH-------HHHHHHhccCCceEEEEc
Q 016363 277 CFECIGLTSVM-------NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 277 vid~~g~~~~~-------~~~~~~l~~~~G~~v~~g 305 (390)
||++++..... ......+.++ ..++++.
T Consensus 179 vInaTp~gm~~~~~~~~~~~~~~~l~~~-~~v~Dlv 213 (271)
T 1npy_A 179 LVNVTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVV 213 (271)
T ss_dssp EEECSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECC
T ss_pred EEECCCCCccCccccCCCCCCHHHcCCC-CEEEEee
Confidence 99999865411 0113456665 6666665
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=95.64 E-value=0.021 Score=48.55 Aligned_cols=62 Identities=18% Similarity=0.348 Sum_probs=43.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
++||+|+ |.+|...++.+. .|+ +|++++++++ ....|..+ ..++.+.+.+. +++|++|.+.|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN--IDSIKKMYEQV--GKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC--HHHHHHHHHHH--CCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC--HHHHHHHHHHh--CCCCEEEECCC
Confidence 7999998 999999998888 898 9999998764 12223222 12233333333 46899999887
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.047 Score=51.08 Aligned_cols=98 Identities=11% Similarity=0.149 Sum_probs=60.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH--HHHHhc-CCcEEEcCC-CCCCcCHHHHHHhhcCCCccEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF--EIGKKF-GITDFINPA-TCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~--~~~~~~-g~~~v~~~~-~~~~~~~~~~i~~~~~~g~D~v 277 (390)
+.+|||+|+ |.+|...++.+...|. +|+++++++++. +.+... +. .++..+ - .+ .+.+.+... ++|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~~~v-~~v~~D~l---~d-~~~l~~~~~-~~d~V 77 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNV-TLFQGPLL---NN-VPLMDTLFE-GAHLA 77 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTE-EEEESCCT---TC-HHHHHHHHT-TCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhcCCc-EEEECCcc---CC-HHHHHHHHh-cCCEE
Confidence 568999998 9999999988888898 899999887765 333332 22 222222 1 11 122333322 68999
Q ss_pred EEcccCh-----HHHHHHHHHhccCC--ceEEEEccc
Q 016363 278 FECIGLT-----SVMNDAFNSSREGW--GKTVILGVE 307 (390)
Q Consensus 278 id~~g~~-----~~~~~~~~~l~~~~--G~~v~~g~~ 307 (390)
|.+.+.. .....+++.++..+ ++++.++..
T Consensus 78 i~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 78 FINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp EECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 9777643 11244555555441 488887754
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=95.63 E-value=0.036 Score=51.84 Aligned_cols=88 Identities=24% Similarity=0.294 Sum_probs=56.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++.+. ....+|+..+ .++.+.+. ..|+|+-++
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~--------~~l~ell~-----~aDvV~l~~ 231 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLF-----HSDCVTLHC 231 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchh-hHhhcCCeec--------CCHHHHHh-----cCCEEEEcC
Confidence 57899999999999999999999999 999999876542 2344554221 12333332 256666665
Q ss_pred cChH----HH-HHHHHHhccCCceEEEEc
Q 016363 282 GLTS----VM-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~----~~-~~~~~~l~~~~G~~v~~g 305 (390)
+... .+ ...+..|+++ ..++.++
T Consensus 232 P~t~~t~~li~~~~l~~mk~g-ailIN~a 259 (347)
T 1mx3_A 232 GLNEHNHHLINDFTVKQMRQG-AFLVNTA 259 (347)
T ss_dssp CCCTTCTTSBSHHHHTTSCTT-EEEEECS
T ss_pred CCCHHHHHHhHHHHHhcCCCC-CEEEECC
Confidence 5321 11 3445566655 5565555
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.61 E-value=0.024 Score=50.40 Aligned_cols=79 Identities=16% Similarity=0.262 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH-HHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhc--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-IGK----KFGITD-FI--NPATCGDKTVSQVIKEMT-- 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~-- 270 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+ .++ ..+... .+ |..+ ..++.+.+.+..
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD 89 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC--HHHHHHHHHHHHHh
Confidence 4678999998 9999999999888999 9999998655432 222 224332 22 2222 122333333322
Q ss_pred CCCccEEEEcccC
Q 016363 271 DGGADYCFECIGL 283 (390)
Q Consensus 271 ~~g~D~vid~~g~ 283 (390)
-+++|++|++.|.
T Consensus 90 ~~~id~li~~Ag~ 102 (265)
T 1h5q_A 90 LGPISGLIANAGV 102 (265)
T ss_dssp SCSEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2369999999874
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.028 Score=51.08 Aligned_cols=92 Identities=13% Similarity=0.113 Sum_probs=58.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-------hhHHHHH---hcCCcEEE-cCCCCCCcCHHHHHHhhc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-------EKFEIGK---KFGITDFI-NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-------~~~~~~~---~~g~~~v~-~~~~~~~~~~~~~i~~~~ 270 (390)
+.+|||+|+ |.+|...++.+...|. +|+++++++ ++.+.++ ..+...+. |..+ .+.+.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d------~~~l~~~~ 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND------HETLVKAI 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC------HHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC------HHHHHHHH
Confidence 467999998 9999999998888898 899999886 5554443 33544332 2222 22333333
Q ss_pred CCCccEEEEcccCh--HHHHHHHHHhccCC--ceEE
Q 016363 271 DGGADYCFECIGLT--SVMNDAFNSSREGW--GKTV 302 (390)
Q Consensus 271 ~~g~D~vid~~g~~--~~~~~~~~~l~~~~--G~~v 302 (390)
. ++|+||.+++.. .....+++.++..+ .+++
T Consensus 75 ~-~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 75 K-QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp T-TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred h-CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 3 699999998853 22344555555431 3565
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.03 Score=49.52 Aligned_cols=100 Identities=19% Similarity=0.229 Sum_probs=68.5
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i 266 (390)
+.....++++++||-+|+|. |..+..+++..+. +|++++.+++.++.+++ .|.. .++..+- .++
T Consensus 28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~---~~~---- 98 (256)
T 1nkv_A 28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGY---- 98 (256)
T ss_dssp HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTC----
T ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh---HhC----
Confidence 44667889999999999875 7788888888888 99999999988777654 3421 2222111 111
Q ss_pred HhhcCCCccEEEEcc------cChHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECI------GLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
...+.+|+|+..- .-...+..+.+.|+++ |+++...
T Consensus 99 --~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~ 140 (256)
T 1nkv_A 99 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE 140 (256)
T ss_dssp --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred --CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence 0124799998521 1233477888999998 9887654
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.59 E-value=0.019 Score=51.19 Aligned_cols=80 Identities=14% Similarity=0.160 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++++. +..+.+.+ .+.. .++..+-.+..++.+.+.+... +
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3578999998 9999999999999999 898886554 33444432 2322 2222111011223333333322 3
Q ss_pred CccEEEEccc
Q 016363 273 GADYCFECIG 282 (390)
Q Consensus 273 g~D~vid~~g 282 (390)
++|++|.+.|
T Consensus 85 ~id~lv~~Ag 94 (264)
T 3i4f_A 85 KIDFLINNAG 94 (264)
T ss_dssp CCCEEECCCC
T ss_pred CCCEEEECCc
Confidence 7999999998
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=95.58 E-value=0.059 Score=50.11 Aligned_cols=87 Identities=16% Similarity=0.092 Sum_probs=61.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|+ +|++.++++++. +.++ .. .. .++.+.+. ..|+|+.++
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~----~~----~~l~ell~-----~aDvV~l~~ 207 (333)
T 1j4a_A 145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GY----YV----DSLDDLYK-----QADVISLHV 207 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TC----BC----SCHHHHHH-----HCSEEEECS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Ce----ec----CCHHHHHh-----hCCEEEEcC
Confidence 47899999999999999999999999 999999887765 2332 21 11 13434333 478998888
Q ss_pred cChHH----H-HHHHHHhccCCceEEEEcc
Q 016363 282 GLTSV----M-NDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 282 g~~~~----~-~~~~~~l~~~~G~~v~~g~ 306 (390)
+.... + ...+..|+++ +.++.++.
T Consensus 208 p~~~~t~~li~~~~l~~mk~g-a~lIn~ar 236 (333)
T 1j4a_A 208 PDVPANVHMINDESIAKMKQD-VVIVNVSR 236 (333)
T ss_dssp CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred CCcHHHHHHHhHHHHhhCCCC-cEEEECCC
Confidence 75331 1 3566788887 78887763
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.014 Score=54.54 Aligned_cols=76 Identities=12% Similarity=0.012 Sum_probs=49.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc--CC-cEEEcCCCCCCcCHHHHHHhhcCC-CccE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF--GI-TDFINPATCGDKTVSQVIKEMTDG-GADY 276 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~--g~-~~v~~~~~~~~~~~~~~i~~~~~~-g~D~ 276 (390)
+.+|||+|+ |.+|...++.+...|. +|+++++++.+.+.+. .+ +. -.++..+- .+ .+.+.++..+ ++|+
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~~~~~d~ 83 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDI---RD-QNKLLESIREFQPEI 83 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCT---TC-HHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccc---cC-HHHHHHHHHhcCCCE
Confidence 578999998 9999999998888898 9999998876543222 11 11 12222221 11 1233333333 6999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
||.+++.
T Consensus 84 vih~A~~ 90 (357)
T 1rkx_A 84 VFHMAAQ 90 (357)
T ss_dssp EEECCSC
T ss_pred EEECCCC
Confidence 9999883
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.01 Score=52.37 Aligned_cols=75 Identities=20% Similarity=0.233 Sum_probs=46.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEecCChh-hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~-~g~~~Vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
++.++||+|+ +++|.+.++.+.. .|+ +|+.++++++ +.+.+ ..+..+-.+..++.+.+.....+++|+++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~id~lv 75 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAENL------KFIKADLTKQQDITNVLDIIKNVSFDGIF 75 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCTTE------EEEECCTTCHHHHHHHHHHTTTCCEEEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEeccccccccccc------eEEecCcCCHHHHHHHHHHHHhCCCCEEE
Confidence 4678999998 9999998877666 677 8999887765 22111 22211111122334444333323899999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 76 ~nAg~ 80 (244)
T 4e4y_A 76 LNAGI 80 (244)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99885
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=95.56 E-value=0.018 Score=54.08 Aligned_cols=77 Identities=14% Similarity=0.226 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+.+|||+|+ |.+|...++.+... |. +|+++++++++.+.+.....-.++..+-.++.+ .+.+... ++|+||.
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~---~~~~~~~-~~d~Vih 97 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITINKE---WVEYHVK-KCDVILP 97 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTTCHH---HHHHHHH-HCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCCCHH---HHHHHhc-cCCEEEE
Confidence 3578999998 99999999988877 88 999999998776554432222233221100122 2222222 6999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+++.
T Consensus 98 ~A~~ 101 (372)
T 3slg_A 98 LVAI 101 (372)
T ss_dssp CBCC
T ss_pred cCcc
Confidence 8874
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.054 Score=53.12 Aligned_cols=85 Identities=15% Similarity=0.112 Sum_probs=55.0
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh---H----HHHHhcCCcEE-EcCCCCCCcCHHHHHHhh
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK---F----EIGKKFGITDF-INPATCGDKTVSQVIKEM 269 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~---~----~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~ 269 (390)
.++++.++||+|+ |++|...++.+...|+++|+.++++... . +.++..|.... +..+-.+...+.+.+.+.
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 3578899999998 9999999988888898669999988642 1 23444565432 221110112334444444
Q ss_pred cCC-CccEEEEcccC
Q 016363 270 TDG-GADYCFECIGL 283 (390)
Q Consensus 270 ~~~-g~D~vid~~g~ 283 (390)
... .+|.||++.|.
T Consensus 302 ~~~g~ld~VIh~AG~ 316 (486)
T 2fr1_A 302 GDDVPLSAVFHAAAT 316 (486)
T ss_dssp CTTSCEEEEEECCCC
T ss_pred HhcCCCcEEEECCcc
Confidence 222 78999999884
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.022 Score=49.90 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=60.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.+.+|||+|+ |.+|...++.+...|+. +|+++++++++.+....-+...+. |..+ .+.+.++.. ++|+||
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d------~~~~~~~~~-~~d~vi 89 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK------LDDYASAFQ-GHDVGF 89 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG------GGGGGGGGS-SCSEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCC------HHHHHHHhc-CCCEEE
Confidence 3678999998 99999999988888863 799999887654322211222211 1111 112323222 799999
Q ss_pred EcccChH--------------HHHHHHHHhccC-CceEEEEcccC
Q 016363 279 ECIGLTS--------------VMNDAFNSSREG-WGKTVILGVEM 308 (390)
Q Consensus 279 d~~g~~~--------------~~~~~~~~l~~~-~G~~v~~g~~~ 308 (390)
++.|... ....+++.+.+. .++++.++...
T Consensus 90 ~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~ 134 (242)
T 2bka_A 90 CCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG 134 (242)
T ss_dssp ECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence 9998632 122334444433 26888887543
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=95.51 E-value=0.022 Score=49.82 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=67.7
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC---Cc-EEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---IT-DFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g---~~-~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
+...++++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++.- .. .++..+. .+... ...+ .
T Consensus 68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~---~~~~~-~~~~-~ 141 (230)
T 1fbn_A 68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQE-YANI-V 141 (230)
T ss_dssp CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGGG-GTTT-S
T ss_pred cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC---CCccc-cccc-C
Confidence 334578899999999976 888888998877449999999998887775421 11 1221111 11000 0011 1
Q ss_pred CCccEEEEcccCh---H-HHHHHHHHhccCCceEEEE
Q 016363 272 GGADYCFECIGLT---S-VMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 272 ~g~D~vid~~g~~---~-~~~~~~~~l~~~~G~~v~~ 304 (390)
+.+|+|+..+... . .+..+.+.|+++ |+++..
T Consensus 142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 177 (230)
T 1fbn_A 142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA 177 (230)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ccEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence 4799999665554 2 367888899998 998875
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.029 Score=50.31 Aligned_cols=82 Identities=10% Similarity=0.114 Sum_probs=49.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
..+.++||+|+ |++|.+.++.+...|+ +|++++ ++.++.+.. ...+.. .++..+-.+..++.+.+.+...
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35788999998 9999999999999999 898887 454443332 223332 2222211011223333332222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 102 g~id~li~nAg~ 113 (269)
T 3gk3_A 102 GKVDVLINNAGI 113 (269)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999999884
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.041 Score=52.61 Aligned_cols=85 Identities=21% Similarity=0.195 Sum_probs=54.0
Q ss_pred hCC-CCCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEecCChhhH----------------HHHHhcCCcEE-EcCCCC
Q 016363 198 AGV-EVGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINPEKF----------------EIGKKFGITDF-INPATC 257 (390)
Q Consensus 198 ~~~-~~g~~VlI~Ga-g~vG~~ai~la~~-~g~~~Vi~~~~~~~~~----------------~~~~~~g~~~v-~~~~~~ 257 (390)
..+ +.++++||+|+ +++|++.++.+.. .|+ +|++++++.+.. +.+++.|.... +.-+-.
T Consensus 55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt 133 (422)
T 3s8m_A 55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF 133 (422)
T ss_dssp CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence 445 35788999998 8999998888777 999 999988765431 34455665432 222221
Q ss_pred CCcCH---HHHHHhhcCCCccEEEEcccC
Q 016363 258 GDKTV---SQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 258 ~~~~~---~~~i~~~~~~g~D~vid~~g~ 283 (390)
+.... .+.+.+..+|++|+++++.|.
T Consensus 134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 134 SDAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 11222 333333332589999998875
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.053 Score=50.56 Aligned_cols=90 Identities=10% Similarity=0.160 Sum_probs=64.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
.+|.|+|.|.+|.+.+..++..|. +|++.++++++.+.+.++|.... .++.+.+.+. ..+.|+||-|+..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~--------~~~~e~~~~a-~~~aDlVilavP~ 78 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS--------ADLEATLQRA-AAEDALIVLAVPM 78 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE--------SCHHHHHHHH-HHTTCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee--------CCHHHHHHhc-ccCCCEEEEeCCH
Confidence 579999999999999999999998 99999999999999988887432 2344444332 1157999999995
Q ss_pred hHHHHHHHHH---hccCCceEEEEc
Q 016363 284 TSVMNDAFNS---SREGWGKTVILG 305 (390)
Q Consensus 284 ~~~~~~~~~~---l~~~~G~~v~~g 305 (390)
.. ....++. ++++ ..++.++
T Consensus 79 ~~-~~~vl~~l~~~~~~-~iv~Dv~ 101 (341)
T 3ktd_A 79 TA-IDSLLDAVHTHAPN-NGFTDVV 101 (341)
T ss_dssp HH-HHHHHHHHHHHCTT-CCEEECC
T ss_pred HH-HHHHHHHHHccCCC-CEEEEcC
Confidence 44 4433332 3444 5555555
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.036 Score=48.70 Aligned_cols=101 Identities=16% Similarity=0.211 Sum_probs=66.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhc----C-CcEEEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF----G-ITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~----g-~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+...++||++||=+|+| .|..+..+|+..|. .+|++++.+++..+.+++. + ...+.. +. .+. +.. ..
T Consensus 71 ~~l~ikpG~~VldlG~G-~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~-d~---~~p-~~~-~~ 143 (233)
T 4df3_A 71 IELPVKEGDRILYLGIA-SGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILG-DA---RFP-EKY-RH 143 (233)
T ss_dssp SCCCCCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEES-CT---TCG-GGG-TT
T ss_pred hhcCCCCCCEEEEecCc-CCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEE-ec---cCc-ccc-cc
Confidence 45679999999999985 37778888888874 3899999999988877653 2 122222 21 111 111 11
Q ss_pred cCCCccEEEEcccChH----HHHHHHHHhccCCceEEEE
Q 016363 270 TDGGADYCFECIGLTS----VMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~----~~~~~~~~l~~~~G~~v~~ 304 (390)
..+.+|+||....... .+..+.+.|+++ |+++..
T Consensus 144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~ 181 (233)
T 4df3_A 144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA 181 (233)
T ss_dssp TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ccceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence 1237999986555432 356777899999 998754
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=95.49 E-value=0.1 Score=46.29 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=30.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
+.+|+|+|+|++|..++..+...|..++..++..
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5799999999999999999999999888888654
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=95.48 E-value=0.065 Score=52.02 Aligned_cols=93 Identities=13% Similarity=-0.002 Sum_probs=57.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+.+|+|+|+|.+|.++++.+...|. +|+++++++++.+.+.+ ++....+..+- .+. +.+.++.. ++|+|++|+
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv---~d~-~~l~~~l~-~~DvVIn~a 76 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV---NDD-AALDAEVA-KHDLVISLI 76 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCT---TCH-HHHHHHHT-TSSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeec---CCH-HHHHHHHc-CCcEEEECC
Confidence 5689999999999999998888898 89999999887765543 33212221111 122 22333322 699999999
Q ss_pred cChHHHHHHHHHhccCCceEE
Q 016363 282 GLTSVMNDAFNSSREGWGKTV 302 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v 302 (390)
+..........++.++ ..++
T Consensus 77 ~~~~~~~i~~a~l~~g-~~vv 96 (450)
T 1ff9_A 77 PYTFHATVIKSAIRQK-KHVV 96 (450)
T ss_dssp C--CHHHHHHHHHHHT-CEEE
T ss_pred ccccchHHHHHHHhCC-CeEE
Confidence 8643233344555554 3444
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.026 Score=50.87 Aligned_cols=93 Identities=12% Similarity=0.241 Sum_probs=60.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+.+|||+|+|.+|...++.+...|. +|+++++++++. .-+...+. |..+ .+ .+.++..+.+|+||.++
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----~~~~~~~~~Dl~d---~~---~~~~~~~~~~d~vih~a 71 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQPM----PAGVQTLIADVTR---PD---TLASIVHLRPEILVYCV 71 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSCC----CTTCCEEECCTTC---GG---GCTTGGGGCCSEEEECH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcccc----ccCCceEEccCCC---hH---HHHHhhcCCCCEEEEeC
Confidence 4579999999999999999999999 999999987663 12233222 2222 21 22223333599999998
Q ss_pred cChH------------HHHHHHHHhccCC-ceEEEEcc
Q 016363 282 GLTS------------VMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 282 g~~~------------~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
+... ....+++.++..+ ++++.++.
T Consensus 72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 72 AASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp HHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6421 2445666666542 47887764
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=95.47 E-value=0.062 Score=49.23 Aligned_cols=100 Identities=15% Similarity=0.223 Sum_probs=67.6
Q ss_pred HHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHH
Q 016363 196 KVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 196 ~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~ 267 (390)
+... ++++++||-+|+|. |..+..+++..++ +|++++.+++..+.+++ .|.. .++..+- .++
T Consensus 110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~----- 179 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM---LDT----- 179 (312)
T ss_dssp TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----
T ss_pred HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hcC-----
Confidence 3444 78899999999864 7777788887787 99999999998877754 3422 2222111 111
Q ss_pred hhcCCCccEEEEc-----ccChHHHHHHHHHhccCCceEEEEcc
Q 016363 268 EMTDGGADYCFEC-----IGLTSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 268 ~~~~~g~D~vid~-----~g~~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
.+..+.+|+|+.. .+-...+..+.+.|+++ |+++....
T Consensus 180 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 222 (312)
T 3vc1_A 180 PFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG 222 (312)
T ss_dssp CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 0123489999863 22234578889999999 99987653
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=95.46 E-value=0.0089 Score=55.55 Aligned_cols=80 Identities=18% Similarity=0.188 Sum_probs=48.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH----HHHHhc------CCc-EEEcCCCCCCcCHHHHHHhhc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF----EIGKKF------GIT-DFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~----~~~~~~------g~~-~v~~~~~~~~~~~~~~i~~~~ 270 (390)
+.+|||+|+ |++|.+.+..+...|+ +|+.+.++.++. +.++.. +.. .++..+-.+..++.+.+.+..
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 568999998 9999999999999998 777776554332 222222 122 222222111223344444443
Q ss_pred CCCccEEEEcccC
Q 016363 271 DGGADYCFECIGL 283 (390)
Q Consensus 271 ~~g~D~vid~~g~ 283 (390)
.+++|++|++.|.
T Consensus 81 ~g~iD~lVnnAG~ 93 (327)
T 1jtv_A 81 EGRVDVLVCNAGL 93 (327)
T ss_dssp TSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3479999999873
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=95.46 E-value=0.019 Score=53.04 Aligned_cols=78 Identities=10% Similarity=0.041 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH-HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+.+|||+|+ |.+|...++.+...|. +|+++++++.+.. .+..+..-.++..+-.+..++.+.+.+. ++|+||+
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih 94 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVH 94 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEE
Confidence 4678999998 9999999998888898 9999998654322 1122221122221110011223333222 7999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+++.
T Consensus 95 ~A~~ 98 (330)
T 2pzm_A 95 SAAA 98 (330)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9874
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=95.45 E-value=0.14 Score=46.28 Aligned_cols=75 Identities=16% Similarity=0.198 Sum_probs=52.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc----CCc-EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GIT-DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~----g~~-~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
-+|.++||+|+ |++|.+++..+...|+ +|+++++++++.+.+. ++ +.. ...+..+ .+.+.+... .
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~------~~~~~~~~~-~ 188 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD------DASRAEAVK-G 188 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS------HHHHHHHTT-T
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC------HHHHHHHHH-h
Confidence 36889999995 9999999999999999 7999999988765442 22 322 2223322 123333322 5
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++++++|.
T Consensus 189 ~DvlVn~ag~ 198 (287)
T 1lu9_A 189 AHFVFTAGAI 198 (287)
T ss_dssp CSEEEECCCT
T ss_pred CCEEEECCCc
Confidence 8999999974
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.037 Score=51.84 Aligned_cols=76 Identities=13% Similarity=0.123 Sum_probs=43.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH--HHHHhc-------CCcEEEcCCCCCCcCHHHHHHhhcCC-
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF--EIGKKF-------GITDFINPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~--~~~~~~-------g~~~v~~~~~~~~~~~~~~i~~~~~~- 272 (390)
.+|||+|+ |.+|...++.+...|. +|+++++++++. +.+..+ +....+..-+. .+ .+.+.++..+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d-~~~~~~~~~~~ 77 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL--SD-TSNLTRILREV 77 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCCS--SC-HHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccchHHHHHHhhccccCCCceEEEECCC--CC-HHHHHHHHHhc
Confidence 57999998 9999999998888898 999999886542 222222 11111111111 11 2234343334
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+||++.+.
T Consensus 78 ~~d~vih~A~~ 88 (372)
T 1db3_A 78 QPDEVYNLGAM 88 (372)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 68999998874
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.017 Score=51.29 Aligned_cols=84 Identities=13% Similarity=0.109 Sum_probs=49.5
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhhHH----HHHhcCCcE-EEcCCCCCCcCHHHHHHhhc-
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFE----IGKKFGITD-FINPATCGDKTVSQVIKEMT- 270 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~----~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~- 270 (390)
...++++|||+|+ |++|.+.++.+...|+ +|++++ ++.++.+ .++..+.+. .+..+-.+..++.+.+.+..
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA 87 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence 3457889999998 9999999999889999 888877 4444332 233344332 22222101122333333322
Q ss_pred -CCCccEEEEcccC
Q 016363 271 -DGGADYCFECIGL 283 (390)
Q Consensus 271 -~~g~D~vid~~g~ 283 (390)
-+++|++|++.|.
T Consensus 88 ~~g~id~lv~~Ag~ 101 (256)
T 3ezl_A 88 EVGEIDVLVNNAGI 101 (256)
T ss_dssp HTCCEEEEEECCCC
T ss_pred hcCCCCEEEECCCC
Confidence 2379999999884
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.059 Score=50.27 Aligned_cols=87 Identities=20% Similarity=0.269 Sum_probs=59.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++.+.+... +...+ .++.+.+. ..|+|+-++
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~--------~~l~ell~-----~sDvV~l~~ 235 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH--------DTLDSLLG-----ASDIFLIAA 235 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC--------SSHHHHHH-----TCSEEEECS
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe--------CCHHHHHh-----hCCEEEEec
Confidence 47899999999999999999999999 9999998865444332 33211 13433333 467777777
Q ss_pred cChH----HH-HHHHHHhccCCceEEEEc
Q 016363 282 GLTS----VM-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~----~~-~~~~~~l~~~~G~~v~~g 305 (390)
+... .+ ...+..|+++ ..++.++
T Consensus 236 Plt~~T~~li~~~~l~~mk~g-ailIN~a 263 (345)
T 4g2n_A 236 PGRPELKGFLDHDRIAKIPEG-AVVINIS 263 (345)
T ss_dssp CCCGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred CCCHHHHHHhCHHHHhhCCCC-cEEEECC
Confidence 6321 11 4566777776 6777665
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.042 Score=49.52 Aligned_cols=93 Identities=22% Similarity=0.209 Sum_probs=64.4
Q ss_pred cccchhhHHHHHHHHhC-CCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCc
Q 016363 183 LSCGVSTGVGAAWKVAG-VEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 183 ~~~~~~tA~~~l~~~~~-~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
+||+...++..+ +..+ --.|.+++|+|.| .+|..++.++...|+ +|+...+.. .
T Consensus 140 ~PcTp~gv~~lL-~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t----------------------~ 195 (285)
T 3p2o_A 140 LPCTPLGVMKLL-KAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT----------------------K 195 (285)
T ss_dssp CCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------S
T ss_pred CCCCHHHHHHHH-HHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc----------------------h
Confidence 455444444433 4443 3589999999985 589999999999999 888876431 2
Q ss_pred CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++.+.++ .+|+||.++|.+..+ --+.++++ ..++.+|..
T Consensus 196 ~L~~~~~-----~ADIVI~Avg~p~~I--~~~~vk~G-avVIDVgi~ 234 (285)
T 3p2o_A 196 DLSLYTR-----QADLIIVAAGCVNLL--RSDMVKEG-VIVVDVGIN 234 (285)
T ss_dssp CHHHHHT-----TCSEEEECSSCTTCB--CGGGSCTT-EEEEECCCE
T ss_pred hHHHHhh-----cCCEEEECCCCCCcC--CHHHcCCC-eEEEEeccC
Confidence 4444443 589999999977522 23567777 788888854
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.06 Score=52.14 Aligned_cols=105 Identities=14% Similarity=0.180 Sum_probs=71.4
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHH-cCC--CeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARL-NRA--SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~--~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
..+....+|||+|+|+||..++.++.. .+. ..|+..+..+.+.+..+.+|.......-+ ..+..+.+..+..++
T Consensus 8 ~~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vd--adnv~~~l~aLl~~~- 84 (480)
T 2ph5_A 8 KKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQIT--PQNYLEVIGSTLEEN- 84 (480)
T ss_dssp TCBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCC--TTTHHHHTGGGCCTT-
T ss_pred ceecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEecc--chhHHHHHHHHhcCC-
Confidence 345667789999999999999987765 444 26888887766666666667543321111 134545565565555
Q ss_pred cEEEEcccChHHHHHHHHHhccCCceEEEEcc
Q 016363 275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 275 D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
|+||+.+-....+..+-.|+..+ -.++....
T Consensus 85 DvVIN~s~~~~~l~Im~acleaG-v~YlDTa~ 115 (480)
T 2ph5_A 85 DFLIDVSIGISSLALIILCNQKG-ALYINAAT 115 (480)
T ss_dssp CEEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred CEEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence 99999886666577777788877 77887764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.036 Score=51.20 Aligned_cols=73 Identities=12% Similarity=0.112 Sum_probs=48.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.+|||+|+ |.+|...++.+...|. +|+++++++.+.+.+...+...+. .+- .+ .+.+.++.. ++|+||.+++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~-~Dl---~d-~~~~~~~~~-~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRV-AEM---LD-HAGLERALR-GLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEE-CCT---TC-HHHHHHHTT-TCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEE-ecC---CC-HHHHHHHHc-CCCEEEECCc
Confidence 47999998 9999999999888998 999999988765544433443332 111 11 233444433 6999999987
Q ss_pred C
Q 016363 283 L 283 (390)
Q Consensus 283 ~ 283 (390)
.
T Consensus 87 ~ 87 (342)
T 2x4g_A 87 Y 87 (342)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.41 E-value=0.087 Score=47.33 Aligned_cols=84 Identities=17% Similarity=0.230 Sum_probs=59.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|.|+|+|.+|.+.+..+...|. +|++.++++++.+.+.+.|.. .+.. ++. +. .++|+||-|+..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~-------~~~----~~--~~~D~vi~av~~ 67 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ-------DLS----LL--QTAKIIFLCTPI 67 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES-------CGG----GG--TTCSEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC-------CHH----Hh--CCCCEEEEECCH
Confidence 68999999999999998888898 899999999998888877753 2221 111 12 368999999986
Q ss_pred hHHHHHHHHH----hccCCceEEEE
Q 016363 284 TSVMNDAFNS----SREGWGKTVIL 304 (390)
Q Consensus 284 ~~~~~~~~~~----l~~~~G~~v~~ 304 (390)
.. ....++. ++++ ..++.+
T Consensus 68 ~~-~~~~~~~l~~~~~~~-~~vv~~ 90 (279)
T 2f1k_A 68 QL-ILPTLEKLIPHLSPT-AIVTDV 90 (279)
T ss_dssp HH-HHHHHHHHGGGSCTT-CEEEEC
T ss_pred HH-HHHHHHHHHhhCCCC-CEEEEC
Confidence 54 4444433 3344 455554
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.072 Score=52.35 Aligned_cols=85 Identities=14% Similarity=0.183 Sum_probs=54.6
Q ss_pred CCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-------HHHHHhcCCcEEEc-CCCCCCcCHHHHHHh
Q 016363 200 VEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FEIGKKFGITDFIN-PATCGDKTVSQVIKE 268 (390)
Q Consensus 200 ~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-------~~~~~~~g~~~v~~-~~~~~~~~~~~~i~~ 268 (390)
++++ .++||+|+ |++|...++.+...|+++|+.+.++... .+.++..|....+. .+-.+...+.+.+.+
T Consensus 234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~ 313 (496)
T 3mje_A 234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE 313 (496)
T ss_dssp CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 3455 89999998 9999999998888898788888886321 23345567553332 111011233444444
Q ss_pred hcCC-CccEEEEcccCh
Q 016363 269 MTDG-GADYCFECIGLT 284 (390)
Q Consensus 269 ~~~~-g~D~vid~~g~~ 284 (390)
.... ++|.||++.|..
T Consensus 314 i~~~g~ld~vVh~AGv~ 330 (496)
T 3mje_A 314 LPEDAPLTAVFHSAGVA 330 (496)
T ss_dssp CCTTSCEEEEEECCCCC
T ss_pred HHHhCCCeEEEECCccc
Confidence 3333 799999998853
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=95.37 E-value=0.029 Score=51.09 Aligned_cols=84 Identities=18% Similarity=0.282 Sum_probs=55.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++++.+. . . .. .++.+.+. ..|+|+-++
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~-----~-~---~~----~~l~ell~-----~aDiV~l~~ 181 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVDQNV-----D-V---IS----ESPADLFR-----QSDFVLIAI 181 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCCTTC-----S-E---EC----SSHHHHHH-----HCSEEEECC
T ss_pred ecchheeeccCchhHHHHHHHHhhCc-EEEEEecccccccc-----c-c---cc----CChHHHhh-----ccCeEEEEe
Confidence 47899999999999999999999999 99999988754321 0 0 00 13433333 266777666
Q ss_pred cChHH----H-HHHHHHhccCCceEEEEc
Q 016363 282 GLTSV----M-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~----~-~~~~~~l~~~~G~~v~~g 305 (390)
+.... + ...++.|+++ ..++.++
T Consensus 182 P~t~~t~~li~~~~l~~mk~g-ailIN~a 209 (290)
T 3gvx_A 182 PLTDKTRGMVNSRLLANARKN-LTIVNVA 209 (290)
T ss_dssp CCCTTTTTCBSHHHHTTCCTT-CEEEECS
T ss_pred eccccchhhhhHHHHhhhhcC-ceEEEee
Confidence 63110 1 3455666666 6666665
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=95.35 E-value=0.046 Score=49.58 Aligned_cols=95 Identities=21% Similarity=0.110 Sum_probs=60.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEecCChhhH--HHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKF--EIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g-~~~Vi~~~~~~~~~--~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
..+|||+|+ |.+|...++.+...| . +|+++++++++. +.+...+...+. |..+ .+.+.+... ++|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d------~~~l~~~~~-~~d~v 76 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDD------QVIMELALN-GAYAT 76 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTTC------HHHHHHHHT-TCSEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCCC------HHHHHHHHh-cCCEE
Confidence 468999998 999999998888778 7 999999987764 333444554332 2222 223333333 69999
Q ss_pred EEcccChH---------HHHHHHHHhccC-CceEEEEc
Q 016363 278 FECIGLTS---------VMNDAFNSSREG-WGKTVILG 305 (390)
Q Consensus 278 id~~g~~~---------~~~~~~~~l~~~-~G~~v~~g 305 (390)
|.+.+... ....+++.++.. -++++..+
T Consensus 77 i~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S 114 (299)
T 2wm3_A 77 FIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSG 114 (299)
T ss_dssp EECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred EEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 99987321 123444444433 15777654
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.12 Score=47.78 Aligned_cols=132 Identities=13% Similarity=0.208 Sum_probs=80.3
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEE-EecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 205 TVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~-g~~~Vi-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +.+|.. . .++.+.+.+ ..+|+|+.|+
T Consensus 5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~--~-------~~~~~~l~~---~~~D~V~i~t 71 (331)
T 4hkt_A 5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE--V-------RTIDAIEAA---ADIDAVVICT 71 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE--E-------CCHHHHHHC---TTCCEEEECS
T ss_pred EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC--c-------CCHHHHhcC---CCCCEEEEeC
Confidence 689999999999888777665 66 666 567777776554 456754 2 244444432 2799999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccCCCCCccc-chHhhhc--ceeEEeeecCCCCchhhHHHHHHHHHcCCCC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN 353 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (390)
+.....+.+..++.. |+-+.+..+.....-.. ......+ ++.+.-.. .......+..+.+++++|.+-
T Consensus 72 p~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG 142 (331)
T 4hkt_A 72 PTDTHADLIERFARA--GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGF--NRRFDPHFMAVRKAIDDGRIG 142 (331)
T ss_dssp CGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--GGGGCHHHHHHHHHHHTTTTC
T ss_pred CchhHHHHHHHHHHc--CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcc--cccCCHHHHHHHHHHHcCCCC
Confidence 988867777788775 56566653321110000 0111122 44333221 222345678888999988653
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=95.35 E-value=0.046 Score=49.64 Aligned_cols=94 Identities=16% Similarity=0.221 Sum_probs=65.2
Q ss_pred ccccchhhHHHHHHHHhCC-CCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC
Q 016363 182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Gag-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 259 (390)
.+||+....+..+ +..+. -.|.+++|+|+| .+|.-+++++...|+ +|++..+. .
T Consensus 144 ~~PcTp~gi~~ll-~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~-------------------t--- 199 (301)
T 1a4i_A 144 FIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSK-------------------T--- 199 (301)
T ss_dssp CCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT-------------------C---
T ss_pred ccCchHHHHHHHH-HHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECC-------------------c---
Confidence 4555444333333 33443 479999999997 589999999999999 88887532 1
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+||.++|.+.. .--+.++++ ..++.+|..
T Consensus 200 ~~L~~~~~-----~ADIVI~Avg~p~~--I~~~~vk~G-avVIDVgi~ 239 (301)
T 1a4i_A 200 AHLDEEVN-----KGDILVVATGQPEM--VKGEWIKPG-AIVIDCGIN 239 (301)
T ss_dssp SSHHHHHT-----TCSEEEECCCCTTC--BCGGGSCTT-CEEEECCCB
T ss_pred ccHHHHhc-----cCCEEEECCCCccc--CCHHHcCCC-cEEEEccCC
Confidence 34555553 58999999998762 223457777 889999864
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=95.34 E-value=0.024 Score=50.82 Aligned_cols=79 Identities=10% Similarity=0.229 Sum_probs=50.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChhh-HHHH-HhcCCc-EEE--cCCCCCCcCHHHHHHh---hc
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEK-FEIG-KKFGIT-DFI--NPATCGDKTVSQVIKE---MT 270 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~-~~~g~~-~v~--~~~~~~~~~~~~~i~~---~~ 270 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++ .+.+ ++++.. ..+ |-.+ ..++.+.+.+ ..
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN--EEHLASLAGRVTEAI 82 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4788999984 8999999999999999 99999988765 2443 334432 122 2222 1222222222 22
Q ss_pred C--CCccEEEEcccC
Q 016363 271 D--GGADYCFECIGL 283 (390)
Q Consensus 271 ~--~g~D~vid~~g~ 283 (390)
+ +++|++|++.|.
T Consensus 83 g~~~~iD~lv~nAg~ 97 (269)
T 2h7i_A 83 GAGNKLDGVVHSIGF 97 (269)
T ss_dssp CTTCCEEEEEECCCC
T ss_pred CCCCCceEEEECCcc
Confidence 2 179999998873
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.05 Score=53.94 Aligned_cols=85 Identities=9% Similarity=0.031 Sum_probs=53.8
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCCh-------------hh----HHHHHhcCCcEEE-cCCCCC
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINP-------------EK----FEIGKKFGITDFI-NPATCG 258 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~-------------~~----~~~~~~~g~~~v~-~~~~~~ 258 (390)
.++++.++||+|+ |++|...++.+...|+++|+.+ +++. ++ .+.++..|....+ ..+-.+
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd 326 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD 326 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence 3568899999998 9999999988888899567777 7773 22 2334455654332 211101
Q ss_pred CcCHHHHHHhhcC-CCccEEEEcccC
Q 016363 259 DKTVSQVIKEMTD-GGADYCFECIGL 283 (390)
Q Consensus 259 ~~~~~~~i~~~~~-~g~D~vid~~g~ 283 (390)
...+.+.+.+... +++|.||++.|.
T Consensus 327 ~~~v~~~~~~i~~~g~id~vVh~AGv 352 (525)
T 3qp9_A 327 AEAAARLLAGVSDAHPLSAVLHLPPT 352 (525)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence 1233444444432 279999999984
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.33 E-value=0.12 Score=46.39 Aligned_cols=89 Identities=25% Similarity=0.324 Sum_probs=60.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcCC-CccEEEEc
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDG-GADYCFEC 280 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~ 280 (390)
.+|.|+|+|.+|.+.++.+...|.. +|++.++++++.+.++++|... ... ++.+.+ . ++|+||.|
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~-------~~~~~~-----~~~aDvVila 69 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT-------SIAKVE-----DFSPDFVMLS 69 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES-------CGGGGG-----GTCCSEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC-------CHHHHh-----cCCCCEEEEc
Confidence 3689999999999999988888753 7999999999998888887642 221 121111 2 58999999
Q ss_pred ccChHHH---HHHHHHhccCCceEEEEc
Q 016363 281 IGLTSVM---NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 281 ~g~~~~~---~~~~~~l~~~~G~~v~~g 305 (390)
+...... ..+...++++ ..++.++
T Consensus 70 vp~~~~~~v~~~l~~~l~~~-~iv~~~~ 96 (281)
T 2g5c_A 70 SPVRTFREIAKKLSYILSED-ATVTDQG 96 (281)
T ss_dssp SCHHHHHHHHHHHHHHSCTT-CEEEECC
T ss_pred CCHHHHHHHHHHHHhhCCCC-cEEEECC
Confidence 9876522 2233345555 5555544
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.024 Score=50.52 Aligned_cols=89 Identities=16% Similarity=0.060 Sum_probs=58.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.+ +++|+|+|++|.+++..+...|+++|+++.|++++.+.+.+ ++. ... .++.+.+. ++|+||++
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~-----~~~~~~~~-----~aDiVIna 173 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL-----DQLDEVVK-----KAKSLFNT 173 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG-----GGHHHHHH-----TCSEEEEC
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH-----HHHHhhhc-----CCCEEEEC
Confidence 46 99999999999999999999998889999999888665532 221 111 12333332 58999998
Q ss_pred ccChHH---HHHHHHHhccCCceEEEEc
Q 016363 281 IGLTSV---MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 281 ~g~~~~---~~~~~~~l~~~~G~~v~~g 305 (390)
++.... .......++++ ..++++.
T Consensus 174 tp~gm~p~~~~i~~~~l~~~-~~V~Div 200 (253)
T 3u62_A 174 TSVGMKGEELPVSDDSLKNL-SLVYDVI 200 (253)
T ss_dssp SSTTTTSCCCSCCHHHHTTC-SEEEECS
T ss_pred CCCCCCCCCCCCCHHHhCcC-CEEEEee
Confidence 864210 00112345655 5555554
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.043 Score=51.35 Aligned_cols=99 Identities=17% Similarity=0.147 Sum_probs=60.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH--cCCCeEEEecCChhhH-------------HHHHhcCCcEEEcCCCCCCcCHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARL--NRASKIIGVDINPEKF-------------EIGKKFGITDFINPATCGDKTVSQV 265 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~--~g~~~Vi~~~~~~~~~-------------~~~~~~g~~~v~~~~~~~~~~~~~~ 265 (390)
.+.+|||+|+ |.+|...++.+.. .|+ +|+++++++... ..+...+. .++..+- .-.+.
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl----~d~~~ 82 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG-EVIAADI----NNPLD 82 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-------CCCCCCGGGGTTCCS-EEEECCT----TCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCccccccccchhhhhhhhhccccCc-eEEECCC----CCHHH
Confidence 4679999998 9999999998888 899 999999865411 11111122 2222111 11234
Q ss_pred HHhhcCCCccEEEEcccChH---------------HHHHHHHHhccCCceEEEEcc
Q 016363 266 IKEMTDGGADYCFECIGLTS---------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 266 i~~~~~~g~D~vid~~g~~~---------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+.++...++|+||++.+... ....+++.++..++++|.++.
T Consensus 83 ~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS 138 (362)
T 3sxp_A 83 LRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASS 138 (362)
T ss_dssp HHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCc
Confidence 44442348999999988422 123344444444367877774
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.066 Score=49.70 Aligned_cols=88 Identities=16% Similarity=0.056 Sum_probs=57.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh----hhHHHHHh---cCCcEEE-cCCCCCCcCHHHHHHhhcCC-
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIGKK---FGITDFI-NPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~----~~~~~~~~---~g~~~v~-~~~~~~~~~~~~~i~~~~~~- 272 (390)
..+|||+|+ |.+|...++.+...|. +|+++++++ ++.+.+.. .+...+. |..+ .+.+.++...
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d------~~~l~~~~~~~ 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE------QEAMEKILKEH 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC------HHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC------HHHHHHHHhhC
Confidence 358999999 9999999999988898 899999876 45554433 3444332 2221 2233333333
Q ss_pred CccEEEEcccChH--HHHHHHHHhccC
Q 016363 273 GADYCFECIGLTS--VMNDAFNSSREG 297 (390)
Q Consensus 273 g~D~vid~~g~~~--~~~~~~~~l~~~ 297 (390)
++|+||.+.+... ....+++.++..
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~ 109 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKAV 109 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHHH
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHHc
Confidence 7999999988532 234555555554
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=95.31 E-value=0.032 Score=48.26 Aligned_cols=101 Identities=11% Similarity=0.113 Sum_probs=67.1
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHH
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI 266 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i 266 (390)
......++.+||-+|+| .|..++.+++.. +. +|++++.+++..+.+++ .|.. .++. .+..+.+
T Consensus 52 ~l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~ 123 (223)
T 3duw_A 52 LLVQIQGARNILEIGTL-GGYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRT------GLALDSL 123 (223)
T ss_dssp HHHHHHTCSEEEEECCT-TSHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHH
T ss_pred HHHHhhCCCEEEEecCC-ccHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHH
Confidence 34455678999999986 577778888876 45 99999999988877654 3432 2222 2344444
Q ss_pred HhhcC---CCccEEEEcccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTD---GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~---~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.. +.+|+|+-.... ...++.+.+.|+++ |.++.-.
T Consensus 124 ~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~ 167 (223)
T 3duw_A 124 QQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDN 167 (223)
T ss_dssp HHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEES
T ss_pred HHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence 43322 369999843322 23467788999998 9887654
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=95.30 E-value=0.1 Score=42.59 Aligned_cols=98 Identities=19% Similarity=0.158 Sum_probs=61.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC-CCccEE
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD-GGADYC 277 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~-~g~D~v 277 (390)
++++++||-+|+|. |..+..+++..|. .++++++.++ ..+. ..-.++..+- .+.+..+.+..... +.+|+|
T Consensus 20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~-~~~~~~~~~~~~~~~~~~D~i 92 (180)
T 1ej0_A 20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDF-RDELVMKALLERVGDSKVQVV 92 (180)
T ss_dssp CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCT-TSHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEccc-ccchhhhhhhccCCCCceeEE
Confidence 78899999999976 7788888887642 3999999887 3321 2112222221 01122222333233 489999
Q ss_pred EE-----cccC------------hHHHHHHHHHhccCCceEEEEc
Q 016363 278 FE-----CIGL------------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 278 id-----~~g~------------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+. ..+. ...+..+.+.|+++ |.++...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 136 (180)
T 1ej0_A 93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKV 136 (180)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 97 2333 24467788999998 9988654
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.11 Score=46.97 Aligned_cols=74 Identities=19% Similarity=0.215 Sum_probs=53.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|... . .+..+.+. ..|+||-|++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~-----~~~~~~~~-----~~Dvvi~~vp~~ 67 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQV---V-----SSPADVAE-----KADRIITMLPTS 67 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEE---C-----SSHHHHHH-----HCSEEEECCSSH
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee---c-----CCHHHHHh-----cCCEEEEeCCCH
Confidence 58899999999999888888898 8999999999988887766421 1 13333333 368888888766
Q ss_pred HHHHHHHH
Q 016363 285 SVMNDAFN 292 (390)
Q Consensus 285 ~~~~~~~~ 292 (390)
......+.
T Consensus 68 ~~~~~v~~ 75 (296)
T 2gf2_A 68 INAIEAYS 75 (296)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 54555544
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.27 E-value=0.031 Score=48.90 Aligned_cols=73 Identities=11% Similarity=0.190 Sum_probs=47.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhc-CCCccEEEEc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT-DGGADYCFEC 280 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~-~~g~D~vid~ 280 (390)
+.++||+|+ |.+|.+.++.+...|+ +|++++++++ . .++ ..+..+-.+..++.+.+.+.. .+++|+++++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~---~~~---~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ 73 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-G---EDL---IYVEGDVTREEDVRRAVARAQEEAPLFAVVSA 73 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-S---SSS---EEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-c---cce---EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence 578999998 9999999998888899 9999998765 1 111 222221111123333333331 1279999998
Q ss_pred ccC
Q 016363 281 IGL 283 (390)
Q Consensus 281 ~g~ 283 (390)
.|.
T Consensus 74 ag~ 76 (242)
T 1uay_A 74 AGV 76 (242)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.24 E-value=0.068 Score=48.54 Aligned_cols=93 Identities=14% Similarity=0.131 Sum_probs=56.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh------hhHHHHHh---cCCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP------EKFEIGKK---FGITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~------~~~~~~~~---~g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
..+|||+|+ |.+|...++.+...|. +|++++|++ ++.+.++. .+... +..+- .+ .+.+.+...
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~---~d-~~~l~~~~~- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGANI-VHGSI---DD-HASLVEAVK- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCEE-ECCCT---TC-HHHHHHHHH-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHhCCCEE-EEecc---CC-HHHHHHHHc-
Confidence 467999998 9999999999888998 899999873 34433332 34433 32211 11 122333222
Q ss_pred CccEEEEcccChH--HHHHHHHHhccC--CceEE
Q 016363 273 GADYCFECIGLTS--VMNDAFNSSREG--WGKTV 302 (390)
Q Consensus 273 g~D~vid~~g~~~--~~~~~~~~l~~~--~G~~v 302 (390)
++|+||.+++... ....+++.++.. -.+++
T Consensus 77 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 77 NVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp TCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred CCCEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 6999999988532 123444444433 14665
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.039 Score=49.34 Aligned_cols=81 Identities=12% Similarity=0.099 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-ecCChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~-~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++ ..+++++.+.. ...+.. .++..+-.+..++.+.+.+... +
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG 103 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3678999998 9999999999999999 7755 55665554332 233333 2222222111223333332222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 104 ~id~li~nAg~ 114 (267)
T 4iiu_A 104 AWYGVVSNAGI 114 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CccEEEECCCC
Confidence 79999999874
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=95.22 E-value=0.085 Score=46.73 Aligned_cols=100 Identities=16% Similarity=0.318 Sum_probs=66.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CCc--EEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT--DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~~--~v~~~~~~~~~~~~~~i~ 267 (390)
+......+++.+||-+|+| .|..+..+++.. . +|++++.+++.++.+++. +.. .++..+- .++
T Consensus 29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l----- 97 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM----- 97 (260)
T ss_dssp HHHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhC-----
Confidence 4466778899999999987 566777777654 4 999999999888777542 322 2222111 111
Q ss_pred hhcCCCccEEEEcccC------hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+.++.+|+|+....- ...+..+.+.|+++ |+++...
T Consensus 98 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~ 140 (260)
T 1vl5_A 98 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD 140 (260)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence 1222479999975432 23578889999999 9998764
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.024 Score=52.48 Aligned_cols=77 Identities=18% Similarity=0.195 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH-HHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vi 278 (390)
.+.+|||+|+ |.+|...++.+...|. +|+++++++... +.+..+..-.++..+- .+ .+.+.++..+ .+|+||
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl---~d-~~~~~~~~~~~~~D~vi 94 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGD-KVVGIDNFATGRREHLKDHPNLTFVEGSI---AD-HALVNQLIGDLQPDAVV 94 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGSCCCTTEEEEECCT---TC-HHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCCccchhhHhhcCCceEEEEeC---CC-HHHHHHHHhccCCcEEE
Confidence 4578999998 9999999998888898 999999875432 2222221112222211 11 1233333333 699999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++++.
T Consensus 95 h~A~~ 99 (333)
T 2q1w_A 95 HTAAS 99 (333)
T ss_dssp ECCCC
T ss_pred ECcee
Confidence 98874
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.015 Score=52.18 Aligned_cols=71 Identities=14% Similarity=0.145 Sum_probs=47.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+.+|||+|+ |.+|...++.+...|+ +|+++++++.+.+ ..+. .++..+- .+ .+.+.++.. ++|+||++.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~---~~~~-~~~~~Dl---~d-~~~~~~~~~-~~D~vi~~A 72 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA---GPNE-ECVQCDL---AD-ANAVNAMVA-GCDGIVHLG 72 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC---CTTE-EEEECCT---TC-HHHHHHHHT-TCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc---CCCC-EEEEcCC---CC-HHHHHHHHc-CCCEEEECC
Confidence 468999998 9999999999888898 9999998876543 1111 2221111 11 233444333 799999998
Q ss_pred cC
Q 016363 282 GL 283 (390)
Q Consensus 282 g~ 283 (390)
|.
T Consensus 73 g~ 74 (267)
T 3rft_A 73 GI 74 (267)
T ss_dssp SC
T ss_pred CC
Confidence 74
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=95.19 E-value=0.088 Score=47.17 Aligned_cols=93 Identities=14% Similarity=0.164 Sum_probs=66.3
Q ss_pred ccccchhhHHHHHHHHhCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCc
Q 016363 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
.+||+....+..+ +..+ -.|.+++|+|.| .+|..+++++...|+ +|++..+. . .
T Consensus 131 ~~PcTp~gv~~lL-~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~-------------------t---~ 185 (276)
T 3ngx_A 131 LVPATPRAVIDIM-DYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSK-------------------T---K 185 (276)
T ss_dssp SCCHHHHHHHHHH-HHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT-------------------C---S
T ss_pred CCCCcHHHHHHHH-HHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCC-------------------c---c
Confidence 3555544445444 4445 789999999985 699999999999999 88887642 1 3
Q ss_pred CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++.+.+++ +|+||.++|.+..+. -..++++ ..++.+|..
T Consensus 186 ~L~~~~~~-----ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~ 224 (276)
T 3ngx_A 186 DIGSMTRS-----SKIVVVAVGRPGFLN--REMVTPG-SVVIDVGIN 224 (276)
T ss_dssp CHHHHHHH-----SSEEEECSSCTTCBC--GGGCCTT-CEEEECCCE
T ss_pred cHHHhhcc-----CCEEEECCCCCcccc--HhhccCC-cEEEEeccC
Confidence 56566654 899999999865222 2457777 888888854
|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
Probab=95.17 E-value=0.21 Score=46.65 Aligned_cols=134 Identities=13% Similarity=0.146 Sum_probs=81.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHc--CCCeEE-EecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 204 STVAIFGLGAVGLAVAEGARLN--RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~--g~~~Vi-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
-+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|. .+. .++.+.+.+ ..+|+|+.
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~~~~~~~-~~~-------~~~~~ll~~---~~~D~V~i 81 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRA-ELIDVCDIDPAALKAAVERTGA-RGH-------ASLTDMLAQ---TDADIVIL 81 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHHCC-EEE-------SCHHHHHHH---CCCSEEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCe-EEEEEEcCCHHHHHHHHHHcCC-cee-------CCHHHHhcC---CCCCEEEE
Confidence 4789999999998887777765 67 665 567777776654 55776 333 245555543 37999999
Q ss_pred cccChHHHHHHHHHhccCCceEEEEcccCCCCCccc-chHhhhc--ceeEEeeecCCCCchhhHHHHHHHHHcCCCC
Q 016363 280 CIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN 353 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (390)
|+......+.+..++.. |+-+.+.-+.....-.. ......+ ++.+.-. ........+..+.+++++|.+-
T Consensus 82 ~tp~~~h~~~~~~al~~--gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~--~~~r~~p~~~~~k~~i~~g~iG 154 (354)
T 3q2i_A 82 TTPSGLHPTQSIECSEA--GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVV--KQNRRNATLQLLKRAMQEKRFG 154 (354)
T ss_dssp CSCGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC--CGGGGSHHHHHHHHHHHTTTTC
T ss_pred CCCcHHHHHHHHHHHHC--CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE--EcccCCHHHHHHHHHHhcCCCC
Confidence 99988767777778775 56666653321110000 0111122 4433222 1222345678888899988653
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.1 Score=45.66 Aligned_cols=95 Identities=16% Similarity=0.118 Sum_probs=64.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.++++.+||=+|+| .|..+..+++. |+ +|++++.+++..+.+++. ..++. .+..+.+..+..+.+|+|+
T Consensus 38 ~~~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~------~d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 38 YFKGCRRVLDIGCG-RGEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK------SDAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp GTTTCSCEEEETCT-TTHHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC------SCHHHHHHTSCTTCBSEEE
T ss_pred hhcCCCeEEEEeCC-CCHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee------ccHHHHhhhcCCCCeeEEE
Confidence 36788999999985 24444555554 87 899999999998888775 22222 2444444344445899998
Q ss_pred Ecc-----cC---hHHHHHHHHHhccCCceEEEEc
Q 016363 279 ECI-----GL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 279 d~~-----g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
... +. ...+..+.+.|+++ |.++...
T Consensus 107 ~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 140 (240)
T 3dli_A 107 ISHFVEHLDPERLFELLSLCYSKMKYS-SYIVIES 140 (240)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEE
T ss_pred ECCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEe
Confidence 632 22 23467888999998 9987654
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=95.17 E-value=0.11 Score=48.09 Aligned_cols=133 Identities=11% Similarity=0.133 Sum_probs=75.9
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEE-EecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 205 TVAIFGLGAVGLAV-AEGARLNRASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 205 ~VlI~Gag~vG~~a-i~la~~~g~~~Vi-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+|.|+|+|.+|... +..++..+. +++ +.++++++.+.+ +++|...+. .++.+.+. ...+|+|+.++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~-~~vav~d~~~~~~~~~~~~~g~~~~~-------~~~~~~l~---~~~~D~V~i~t 70 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGG-EVVSMMSTSAERGAAYATENGIGKSV-------TSVEELVG---DPDVDAVYVST 70 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTC-EEEEEECSCHHHHHHHHHHTTCSCCB-------SCHHHHHT---CTTCCEEEECS
T ss_pred eEEEEcccHHHHHhhhHHhhcCCC-eEEEEECCCHHHHHHHHHHcCCCccc-------CCHHHHhc---CCCCCEEEEeC
Confidence 58899999999876 644434777 665 567777776554 456653221 23433332 12799999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccCCCCCcc-cchHhhhc--ceeEEeeecCCCCchhhHHHHHHHHHcCCC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKEL 352 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 352 (390)
+.....+.+..++.. |+-+.+..+.....-. .......+ ++.+.-. ........+..+.+++++|.+
T Consensus 71 p~~~h~~~~~~al~~--Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~--~~~r~~p~~~~~~~~i~~g~i 140 (332)
T 2glx_A 71 TNELHREQTLAAIRA--GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTN--HHLRNAAAHRAMRDAIAEGRI 140 (332)
T ss_dssp CGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC--CCGGGSHHHHHHHHHHHTTTT
T ss_pred ChhHhHHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEe--ehhhcCHHHHHHHHHHHcCCC
Confidence 987766777777775 5655564221110000 00111112 4433222 122233567888888888865
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=95.16 E-value=0.0098 Score=54.76 Aligned_cols=115 Identities=14% Similarity=0.147 Sum_probs=70.8
Q ss_pred hccccchhhHHHHHHHH--------hC-CCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEecCChhhH-HHHHhcCC-
Q 016363 181 CLLSCGVSTGVGAAWKV--------AG-VEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGI- 248 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~--------~~-~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~~~g~- 248 (390)
..+||+...++..+.+. .+ --.|.+++|+|+| .+|..+++++...|+ +|+++.++..+. ++...++.
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~ 224 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLN 224 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCC
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhh
Confidence 34566555555444331 23 3478999999997 569999999999998 899998874432 22222332
Q ss_pred -cEEEc---CCCCCCcCHHHHHHhhcCCCccEEEEcccChHH-HHHHHHHhccCCceEEEEccc
Q 016363 249 -TDFIN---PATCGDKTVSQVIKEMTDGGADYCFECIGLTSV-MNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 249 -~~v~~---~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 307 (390)
..... .+. .++.+.++ .+|+||.++|.+.. +. -..++++ ..++.+|..
T Consensus 225 ~~~~t~~~~t~~---~~L~e~l~-----~ADIVIsAtg~p~~vI~--~e~vk~G-avVIDVgi~ 277 (320)
T 1edz_A 225 KHHVEDLGEYSE---DLLKKCSL-----DSDVVITGVPSENYKFP--TEYIKEG-AVCINFACT 277 (320)
T ss_dssp CCEEEEEEECCH---HHHHHHHH-----HCSEEEECCCCTTCCBC--TTTSCTT-EEEEECSSS
T ss_pred cccccccccccH---hHHHHHhc-----cCCEEEECCCCCcceeC--HHHcCCC-eEEEEcCCC
Confidence 11100 000 23455554 48999999998752 22 2346776 788888864
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=95.13 E-value=0.13 Score=46.56 Aligned_cols=96 Identities=15% Similarity=0.114 Sum_probs=65.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC---cEEEcCCCCCCcCHHHHHHhhcC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
.+.++.+||-+|+| .|..+..+++..++ +|++++.++..++.+++ .|. -.++..+- .++ .+.+
T Consensus 79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~~~ 148 (297)
T 2o57_A 79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI-----PCED 148 (297)
T ss_dssp CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC-----SSCT
T ss_pred CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc---ccC-----CCCC
Confidence 88999999999986 57777788887788 99999999988776654 232 12222111 111 1122
Q ss_pred CCccEEEEcccC------hHHHHHHHHHhccCCceEEEEc
Q 016363 272 GGADYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 272 ~g~D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+|+|+....- ...+..+.+.|+++ |+++...
T Consensus 149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 187 (297)
T 2o57_A 149 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITD 187 (297)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 379999864332 23478889999998 9988765
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=95.12 E-value=0.087 Score=46.60 Aligned_cols=100 Identities=22% Similarity=0.298 Sum_probs=66.2
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHH
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~ 267 (390)
.....++++||-+|+| .|..++.+++.+ +. +|++++.+++..+.+++ .|.. .++. .+..+.+.
T Consensus 74 l~~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~------gda~~~l~ 145 (247)
T 1sui_A 74 LLKLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFRE------GPALPVLD 145 (247)
T ss_dssp HHHHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHH
T ss_pred HHHhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE------CCHHHHHH
Confidence 3445677899999875 477777888876 45 99999999998877754 3432 1222 23444444
Q ss_pred hhc-----CCCccEEEEcccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMT-----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~-----~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+. .+.||+||-.... ...++.+.+.|+++ |.++.-.
T Consensus 146 ~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~ 190 (247)
T 1sui_A 146 EMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN 190 (247)
T ss_dssp HHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred HHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence 332 3479999843322 23467888999998 9987543
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.12 E-value=0.14 Score=47.99 Aligned_cols=77 Identities=13% Similarity=0.267 Sum_probs=55.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
..+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|... . .++.+.+.+. ..+|+||-|+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~----~----~s~~e~~~~a--~~~DvVi~~vp 90 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG----A----RSIEEFCAKL--VKPRVVWLMVP 90 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC----C----SSHHHHHHHS--CSSCEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE----e----CCHHHHHhcC--CCCCEEEEeCC
Confidence 4689999999999999999999998 9999999999988887766421 1 2344444331 13578887777
Q ss_pred ChHHHHHHH
Q 016363 283 LTSVMNDAF 291 (390)
Q Consensus 283 ~~~~~~~~~ 291 (390)
... ....+
T Consensus 91 ~~~-v~~vl 98 (358)
T 4e21_A 91 AAV-VDSML 98 (358)
T ss_dssp GGG-HHHHH
T ss_pred HHH-HHHHH
Confidence 663 44333
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=95.12 E-value=0.086 Score=49.04 Aligned_cols=133 Identities=13% Similarity=0.101 Sum_probs=79.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHc-CCCeEE-EecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEE
Q 016363 204 STVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFE 279 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~-g~~~Vi-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid 279 (390)
-+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|. .+. .++.+. ... .+|+|+.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~-~~~-------~~~~~~----l~~~~~D~V~i 71 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANGA-EAV-------ASPDEV----FARDDIDGIVI 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTTC-EEE-------SSHHHH----TTCSCCCEEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCC-cee-------CCHHHH----hcCCCCCEEEE
Confidence 3689999999999888877765 66 666 567777776554 55673 332 133333 333 7999999
Q ss_pred cccChHHHHHHHHHhccCCceEEEEcccCCCCCccc-chHhhhc--ceeEEeeecCCCCchhhHHHHHHHHHcCCCC
Q 016363 280 CIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN 353 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (390)
|++.....+.+..++.. |+-+.+..+.....-.. ......+ ++.+.-.. .......+..+.+++++|.+-
T Consensus 72 ~tp~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG 144 (344)
T 3euw_A 72 GSPTSTHVDLITRAVER--GIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGF--NRRFDPSFAAINARVANQEIG 144 (344)
T ss_dssp CSCGGGHHHHHHHHHHT--TCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred eCCchhhHHHHHHHHHc--CCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecc--hhhcCHHHHHHHHHHhcCCCC
Confidence 99988867777788875 45555653321110000 0111122 33332221 122345678888899988653
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.066 Score=48.22 Aligned_cols=94 Identities=17% Similarity=0.208 Sum_probs=65.9
Q ss_pred ccccchhhHHHHHHHHhCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC
Q 016363 182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 259 (390)
.+||+...++..| +..+. -.|.+++|+|. +.+|..++.++...|+ +|+...+. .
T Consensus 140 ~~PcTp~gv~~lL-~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~-------------------T--- 195 (286)
T 4a5o_A 140 LRPCTPKGIMTLL-ASTGADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRF-------------------T--- 195 (286)
T ss_dssp SCCHHHHHHHHHH-HHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTT-------------------C---
T ss_pred CCCCCHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCC-------------------C---
Confidence 3555544444433 44443 48999999998 5599999999999999 88887632 1
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+||.++|.+..+ --+.++++ ..++.+|..
T Consensus 196 ~~L~~~~~-----~ADIVI~Avg~p~~I--~~~~vk~G-avVIDvgi~ 235 (286)
T 4a5o_A 196 RDLADHVS-----RADLVVVAAGKPGLV--KGEWIKEG-AIVIDVGIN 235 (286)
T ss_dssp SCHHHHHH-----TCSEEEECCCCTTCB--CGGGSCTT-CEEEECCSC
T ss_pred cCHHHHhc-----cCCEEEECCCCCCCC--CHHHcCCC-eEEEEeccc
Confidence 24555554 489999999977522 23567877 888889854
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.034 Score=48.12 Aligned_cols=102 Identities=13% Similarity=0.144 Sum_probs=67.6
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHH
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~ 267 (390)
......++.+||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++ .|.. .++. .+..+.+.
T Consensus 58 ~l~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~ 130 (225)
T 3tr6_A 58 LLVKLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL------SPAKDTLA 130 (225)
T ss_dssp HHHHHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHH
T ss_pred HHHHhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe------CCHHHHHH
Confidence 334456788999999864 777888888763 3399999999998877754 3432 1221 23444444
Q ss_pred hhcC----CCccEEEEcccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTD----GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~----~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+.. +.+|+|+-.... ...++.+.+.|+++ |.++...
T Consensus 131 ~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~ 174 (225)
T 3tr6_A 131 ELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDN 174 (225)
T ss_dssp HHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred HhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence 4332 479999843332 22367788999998 9987644
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=95.09 E-value=0.068 Score=49.32 Aligned_cols=37 Identities=16% Similarity=0.150 Sum_probs=31.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
.+.+|||+|+ |.+|...++.+...|. +|+++++++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~ 41 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGY-TVRATVRDPTN 41 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCTTC
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEECCcch
Confidence 4678999998 9999999998888999 99998888764
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.082 Score=47.98 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=64.4
Q ss_pred ccccchhhHHHHHHHHhCCCCCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCc
Q 016363 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
.+||+...++..+.+..---.|.+++|+|.| .+|..++.++...|+ +|++..+...
T Consensus 144 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~---------------------- 200 (300)
T 4a26_A 144 FTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTS---------------------- 200 (300)
T ss_dssp CCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSC----------------------
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCC----------------------
Confidence 3455544445444333334589999999985 589999999999999 8888875322
Q ss_pred CHH--HHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 261 TVS--QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 261 ~~~--~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++. +.++ .+|+||.++|.+..+. -..++++ ..++.+|..
T Consensus 201 ~l~l~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~ 241 (300)
T 4a26_A 201 TEDMIDYLR-----TADIVIAAMGQPGYVK--GEWIKEG-AAVVDVGTT 241 (300)
T ss_dssp HHHHHHHHH-----TCSEEEECSCCTTCBC--GGGSCTT-CEEEECCCE
T ss_pred Cchhhhhhc-----cCCEEEECCCCCCCCc--HHhcCCC-cEEEEEecc
Confidence 222 3333 4899999999765222 2457777 888888854
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=95.05 E-value=0.085 Score=49.01 Aligned_cols=44 Identities=25% Similarity=0.336 Sum_probs=37.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++++ +...++|
T Consensus 145 ~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g 188 (333)
T 2d0i_A 145 YGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELK 188 (333)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHT
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcC
Confidence 57899999999999999999999999 99999998876 4443333
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.05 E-value=0.057 Score=46.00 Aligned_cols=95 Identities=12% Similarity=0.105 Sum_probs=63.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC----cEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----TDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
+.++++||-+|+|. |..+..+++. |..+|++++.++...+.+++... -.++..+- .++ .+..+.+|
T Consensus 40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~---~~~-----~~~~~~fD 109 (215)
T 2pxx_A 40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV---RKL-----DFPSASFD 109 (215)
T ss_dssp CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT---TSC-----CSCSSCEE
T ss_pred cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch---hcC-----CCCCCccc
Confidence 57889999999865 7777777765 44489999999998888876421 12222211 111 12234799
Q ss_pred EEEEcccC---------------------hHHHHHHHHHhccCCceEEEEc
Q 016363 276 YCFECIGL---------------------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 276 ~vid~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+|+....- ...+..+.+.|+++ |+++...
T Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~ 159 (215)
T 2pxx_A 110 VVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMT 159 (215)
T ss_dssp EEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred EEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEe
Confidence 99963211 23467788899998 9998775
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=95.01 E-value=0.16 Score=44.30 Aligned_cols=96 Identities=11% Similarity=0.008 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
....+|+|+|+|.+|...++.+...|. |+++++++++.+.+. .+...+. .+. .-.+.+++..-.++|.|+-+
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~~~~~i~-gd~----~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKKVLR-SGANFVH-GDP----TRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-TTCEEEE-SCT----TCHHHHHHTTCTTCSEEEEC
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-cCCeEEE-cCC----CCHHHHHhcCcchhcEEEEc
Confidence 456789999999999999888887776 889999999888777 6644333 222 22234444423389999999
Q ss_pred ccChHHH---HHHHHHhccCCceEEEEc
Q 016363 281 IGLTSVM---NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 281 ~g~~~~~---~~~~~~l~~~~G~~v~~g 305 (390)
++....- ....+.+.+. .+++.-.
T Consensus 79 ~~~d~~n~~~~~~a~~~~~~-~~iia~~ 105 (234)
T 2aef_A 79 LESDSETIHCILGIRKIDES-VRIIAEA 105 (234)
T ss_dssp CSCHHHHHHHHHHHHHHCSS-SEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHCCC-CeEEEEE
Confidence 9986521 2233444444 4665443
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.00 E-value=0.036 Score=47.19 Aligned_cols=74 Identities=16% Similarity=0.217 Sum_probs=46.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.++||+|+ |.+|...++.+... +|+++++++++.+.+.+ ++. ..+..+-.+..++.+.+.+ .+++|++|.+.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~a 74 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAV 74 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECC
Confidence 36899998 99999877766544 89999999887765543 433 3332221011122233332 24799999998
Q ss_pred cC
Q 016363 282 GL 283 (390)
Q Consensus 282 g~ 283 (390)
|.
T Consensus 75 g~ 76 (207)
T 2yut_A 75 GK 76 (207)
T ss_dssp CC
T ss_pred Cc
Confidence 74
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=94.99 E-value=0.059 Score=48.67 Aligned_cols=71 Identities=21% Similarity=0.158 Sum_probs=48.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|+|.+|...+..+.. |. +|++.++++++.+.+.+.|.... + . .+ .+ ..+|+||.|+...
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~-~-~----~~---~~-----~~~D~vi~~v~~~ 66 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA-V-P----LE---RV-----AEARVIFTCLPTT 66 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE-C-C----GG---GG-----GGCSEEEECCSSH
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc-C-H----HH---HH-----hCCCEEEEeCCCh
Confidence 58899999999998887777 98 89999999998887766554321 1 1 11 01 1467777777766
Q ss_pred HHHHHHH
Q 016363 285 SVMNDAF 291 (390)
Q Consensus 285 ~~~~~~~ 291 (390)
......+
T Consensus 67 ~~~~~v~ 73 (289)
T 2cvz_A 67 REVYEVA 73 (289)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4344333
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=94.99 E-value=0.031 Score=51.83 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=57.3
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
-.++.+|||+|+ |.+|...++.+...|. +|+++++++.+ .+...+. |..+ . +.+.++.. ++|+|
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~------~~~~~~~~Dl~d---~---~~~~~~~~-~~d~v 81 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG------TGGEEVVGSLED---G---QALSDAIM-GVSAV 81 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS------SCCSEEESCTTC---H---HHHHHHHT-TCSEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC------CCccEEecCcCC---H---HHHHHHHh-CCCEE
Confidence 446778999998 9999999999999999 99999988765 2333322 2222 2 22333332 79999
Q ss_pred EEcccChH---------------HHHHHHHHhccCC-ceEEEEcc
Q 016363 278 FECIGLTS---------------VMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 278 id~~g~~~---------------~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
|.+.+... ....+++.+...+ +++|.++.
T Consensus 82 ih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 82 LHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp EECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred EECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99877421 1233444444431 47887775
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=94.98 E-value=0.049 Score=50.48 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=47.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh----------hHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhh
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE----------KFEIGKK-FGIT-DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~----------~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.+|||+|+ |.+|...++.+...|. +|++++++.. ..+.+.. .+.. .++..+- .+ .+.+.++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~---~~-~~~~~~~ 76 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDI---LD-QGALQRL 76 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCT---TC-HHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCC---CC-HHHHHHH
Confidence 368999998 9999999998888898 8999986432 2333332 2321 2222221 11 1223333
Q ss_pred cCC-CccEEEEcccC
Q 016363 270 TDG-GADYCFECIGL 283 (390)
Q Consensus 270 ~~~-g~D~vid~~g~ 283 (390)
... ++|+||.+.+.
T Consensus 77 ~~~~~~d~vih~A~~ 91 (348)
T 1ek6_A 77 FKKYSFMAVIHFAGL 91 (348)
T ss_dssp HHHCCEEEEEECCSC
T ss_pred HHhcCCCEEEECCCC
Confidence 322 79999999884
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=94.98 E-value=0.061 Score=47.28 Aligned_cols=70 Identities=24% Similarity=0.315 Sum_probs=45.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.+|||+|+ |.+|...+..+...|+ +|+++++++++.+. ....|-.+ ...+.+.+.++ .+++|++|++.|
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~~~D~~~--~~~~~~~~~~~-~~~~d~vi~~Ag 71 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------DLSTPGGR--ETAVAAVLDRC-GGVLDGLVCCAG 71 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHHH--HHHHHHHHHHH-TTCCSEEEECCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------cccCCccc--HHHHHHHHHHc-CCCccEEEECCC
Confidence 37999998 9999999998888999 99999988765321 00000000 01122222222 248999999887
Q ss_pred C
Q 016363 283 L 283 (390)
Q Consensus 283 ~ 283 (390)
.
T Consensus 72 ~ 72 (255)
T 2dkn_A 72 V 72 (255)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.3 Score=45.31 Aligned_cols=134 Identities=8% Similarity=0.101 Sum_probs=82.1
Q ss_pred CEEEEEcCChHHHH-HHHHHHHc-CCCeEEEe-cCChhhHHH-HHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 204 STVAIFGLGAVGLA-VAEGARLN-RASKIIGV-DINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Gag~vG~~-ai~la~~~-g~~~Vi~~-~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
=+|.|+|+|.+|.. .+...+.. ++ +|+++ ++++++.+. ++++|...++. ++.+.+.+ ..+|+|+-
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y~-------d~~ell~~---~~iDaV~I 92 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAFG-------SYEEMLAS---DVIDAVYI 92 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEES-------SHHHHHHC---SSCSEEEE
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeeeC-------CHHHHhcC---CCCCEEEE
Confidence 37999999999975 35555544 67 77754 566666554 46688766552 45444432 37999999
Q ss_pred cccChHHHHHHHHHhccCCceEEEEcccCCCCCcccc-hHhhhc--ceeEEeeecCCCCchhhHHHHHHHHHcCCC
Q 016363 280 CIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKEL 352 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 352 (390)
|++.....+.+..+|.. |+=|++.-+.....-... .....+ ++.+.-.. .......+..+.+++++|.+
T Consensus 93 ~tP~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~--~~R~~p~~~~~k~~i~~G~i 164 (350)
T 4had_A 93 PLPTSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAY--MITYSPVWQKVRSLIDEGAI 164 (350)
T ss_dssp CSCGGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTT
T ss_pred eCCCchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEee--eeecCHHHHHhhHhhhcCCC
Confidence 99988867888888875 677777643321111100 111122 33332221 22234567888899999865
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.15 Score=45.39 Aligned_cols=101 Identities=17% Similarity=0.243 Sum_probs=68.0
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC---cEEEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~---~~v~~~~~~~~~~~~~~i 266 (390)
+.+...++++++||-+|+|. |..+..+++..+. +|++++.+++..+.+++ .|. -.++..+- .++
T Consensus 53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~---- 123 (273)
T 3bus_A 53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADA---MDL---- 123 (273)
T ss_dssp HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC----
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc---ccC----
Confidence 44667889999999999864 7777888887787 99999999988777654 232 12222211 111
Q ss_pred HhhcCCCccEEEEccc-----C-hHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 305 (390)
...++.+|+|+..-. . ...+..+.+.|+++ |+++...
T Consensus 124 -~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~ 166 (273)
T 3bus_A 124 -PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIAD 166 (273)
T ss_dssp -CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred -CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 112237999985322 2 23467888999998 9987665
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.11 Score=48.43 Aligned_cols=133 Identities=14% Similarity=0.144 Sum_probs=80.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHc-CCCeEE-EecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 204 STVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~-g~~~Vi-~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
-+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|... + .++.+.+. ...+|+|+.|
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~lvav~d~~~~~~~~~~~~~g~~~---~-----~~~~~~l~---~~~~D~V~i~ 73 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKL-KLVTCYSRTEDKREKFGKRYNCAG---D-----ATMEALLA---REDVEMVIIT 73 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSE-EEEEEECSSHHHHHHHHHHHTCCC---C-----SSHHHHHH---CSSCCEEEEC
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCCCC---c-----CCHHHHhc---CCCCCEEEEe
Confidence 4789999999999888777766 67 666 557777776654 4567543 2 24544443 2379999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccCCCCCcccc-hHhhhc--ceeEEeeecCCCCchhhHHHHHHHHHcCCC
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKEL 352 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 352 (390)
++.....+.+..++.. |+-+++..+.....-... .....+ ++.+.-.. .......+..+.+++++|.+
T Consensus 74 tp~~~h~~~~~~al~~--gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~--~~R~~p~~~~~k~~i~~g~i 144 (354)
T 3db2_A 74 VPNDKHAEVIEQCARS--GKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGH--SSRRLGALRKMKEMIDTKEI 144 (354)
T ss_dssp SCTTSHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEEC--GGGGSHHHHHHHHHHHTTTT
T ss_pred CChHHHHHHHHHHHHc--CCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEee--chhcCHHHHHHHHHHhcCCC
Confidence 9988767777788875 555666533211100000 111112 34333221 22234567888889998865
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=94.92 E-value=0.23 Score=47.33 Aligned_cols=112 Identities=15% Similarity=0.124 Sum_probs=70.1
Q ss_pred hhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-----------hcCC--cE--EE
Q 016363 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-----------KFGI--TD--FI 252 (390)
Q Consensus 188 ~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-----------~~g~--~~--v~ 252 (390)
...+..+....+++++++||=+|+| .|..++++|+..++.+|++++.+++-.+.++ .+|. .. ++
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi 237 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE 237 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCT-TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence 3344455677899999999988886 5777888888889867999999986444443 2342 22 22
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEc-cc-C---hHHHHHHHHHhccCCceEEEEccc
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFEC-IG-L---TSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~-~g-~---~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
..+- .+..+.+.+ ..+|+|+-. .- . ...+...++.|+++ |+++.+-..
T Consensus 238 ~GD~-~~lp~~d~~-----~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f 290 (438)
T 3uwp_A 238 RGDF-LSEEWRERI-----ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPF 290 (438)
T ss_dssp ECCT-TSHHHHHHH-----HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCS
T ss_pred ECcc-cCCcccccc-----CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeecc
Confidence 2221 112221111 158999842 21 1 22456677889998 999977543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=94.86 E-value=0.12 Score=52.23 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=63.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hh-HHHHHhcCCcEEEcCCCC-C-CcCHHHHHHhhcCCCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EK-FEIGKKFGITDFINPATC-G-DKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~-~~~~~~~g~~~v~~~~~~-~-~~~~~~~i~~~~~~g~D~ 276 (390)
.|+++||+|+ +++|.+.++.+...|+ +|++.++.. ++ .+.+++.|...+....+. . ...+.+.+.+.. +++|+
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi 398 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI 398 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence 4678999998 9999999999999999 899887532 22 234444555444333220 0 011222222222 37999
Q ss_pred EEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcc
Q 016363 277 CFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV 306 (390)
Q Consensus 277 vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~ 306 (390)
++++.|... ..+.++..|+. ++|+|+.++.
T Consensus 399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS 454 (604)
T 2et6_A 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITS 454 (604)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 999988411 23455566643 2389998875
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.069 Score=48.87 Aligned_cols=92 Identities=9% Similarity=0.086 Sum_probs=58.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh------hhHHHHH---hcCCcEEE-cCCCCCCcCHHHHHHhhcC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP------EKFEIGK---KFGITDFI-NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~------~~~~~~~---~~g~~~v~-~~~~~~~~~~~~~i~~~~~ 271 (390)
..+|||+|+ |.+|...++.+...|. +|+++++++ ++.+.+. ..+...+. |..+ .+.+.+...
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d------~~~l~~a~~ 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEE------HEKMVSVLK 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTC------HHHHHHHHT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCC------HHHHHHHHc
Confidence 357999998 9999999998888898 899999886 3444332 33444332 2222 233444333
Q ss_pred CCccEEEEcccChH--HHHHHHHHhccCC--ceEE
Q 016363 272 GGADYCFECIGLTS--VMNDAFNSSREGW--GKTV 302 (390)
Q Consensus 272 ~g~D~vid~~g~~~--~~~~~~~~l~~~~--G~~v 302 (390)
++|+||.+++... ....+++.+...+ ++++
T Consensus 77 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 77 -QVDIVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp -TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred -CCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 6999999988531 2344555555441 3666
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=94.84 E-value=0.053 Score=49.48 Aligned_cols=68 Identities=18% Similarity=0.283 Sum_probs=39.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+.+|||+|+ |.+|...++.+...|. +|+++++++.+. + ....|..+ ...+.+.+... ++|+||++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------~-~~~~Dl~d--~~~~~~~~~~~---~~d~vih~A 68 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRARP------K-FEQVNLLD--SNAVHHIIHDF---QPHVIVHCA 68 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC---------------------------CHHHHHHH---CCSEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCCC------C-eEEecCCC--HHHHHHHHHhh---CCCEEEECC
Confidence 468999998 9999999999888898 999999765441 1 01112111 12233333322 689999988
Q ss_pred cC
Q 016363 282 GL 283 (390)
Q Consensus 282 g~ 283 (390)
+.
T Consensus 69 ~~ 70 (315)
T 2ydy_A 69 AE 70 (315)
T ss_dssp --
T ss_pred cc
Confidence 74
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=94.83 E-value=0.075 Score=49.36 Aligned_cols=86 Identities=20% Similarity=0.156 Sum_probs=61.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|+ +|++.++++++. +.+. .. + .++.+.+. ..|+|+.++
T Consensus 144 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~----~-----~~l~ell~-----~aDvV~~~~ 205 (333)
T 1dxy_A 144 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKG--DHPD-FD----Y-----VSLEDLFK-----QSDVIDLHV 205 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS--CCTT-CE----E-----CCHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCcchh--hHhc-cc----c-----CCHHHHHh-----cCCEEEEcC
Confidence 57899999999999999999999999 999999877543 1111 11 1 13433333 478998888
Q ss_pred cChHH----H-HHHHHHhccCCceEEEEcc
Q 016363 282 GLTSV----M-NDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 282 g~~~~----~-~~~~~~l~~~~G~~v~~g~ 306 (390)
+.... + ...+..|+++ +.++.++.
T Consensus 206 P~~~~t~~li~~~~l~~mk~g-a~lIn~sr 234 (333)
T 1dxy_A 206 PGIEQNTHIINEAAFNLMKPG-AIVINTAR 234 (333)
T ss_dssp CCCGGGTTSBCHHHHHHSCTT-EEEEECSC
T ss_pred CCchhHHHHhCHHHHhhCCCC-cEEEECCC
Confidence 75431 1 4567888887 88887774
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.035 Score=50.80 Aligned_cols=74 Identities=22% Similarity=0.278 Sum_probs=47.5
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEE
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~v 277 (390)
-++..+|||+|+ |.+|...++.+...|. +|+++++++.+ +. ++.. ++..+- .+ .+.+.++..+ ++|+|
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~-~~~~Dl---~d-~~~~~~~~~~~~~d~v 78 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVE-MISLDI---MD-SQRVKKVISDIKPDYI 78 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEE-EEECCT---TC-HHHHHHHHHHHCCSEE
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceee-EEECCC---CC-HHHHHHHHHhcCCCEE
Confidence 456678999998 9999999999888898 99999988765 21 2322 222111 11 2233333333 69999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+++.
T Consensus 79 ih~A~~ 84 (321)
T 2pk3_A 79 FHLAAK 84 (321)
T ss_dssp EECCSC
T ss_pred EEcCcc
Confidence 999874
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=94.81 E-value=0.16 Score=43.31 Aligned_cols=99 Identities=9% Similarity=0.007 Sum_probs=62.0
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CC----------------c-EEEcCCCC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI----------------T-DFINPATC 257 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~----------------~-~v~~~~~~ 257 (390)
....+.++.+||.+|+| .|..+..+++. |+ +|++++.+++-++.+++. +. . .++..+-
T Consensus 16 ~~l~~~~~~~vLD~GCG-~G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~- 91 (203)
T 1pjz_A 16 SSLNVVPGARVLVPLCG-KSQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF- 91 (203)
T ss_dssp HHHCCCTTCEEEETTTC-CSHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-
T ss_pred HhcccCCCCEEEEeCCC-CcHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc-
Confidence 55677899999999985 35566667765 88 999999999988877652 11 1 1221111
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccC-----h---HHHHHHHHHhccCCceEEEEc
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGL-----T---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~-----~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+..+.+ .+.||+|++...- . ..++.+.+.|+++ |+++.+.
T Consensus 92 ~~l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~~ 140 (203)
T 1pjz_A 92 FALTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT 140 (203)
T ss_dssp SSSTHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred ccCCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 0011111 0269999973221 1 1356788999998 9844443
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.083 Score=46.39 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=65.8
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHH
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~ 267 (390)
.....++.+||-+|+| .|..++.+++.+ +. +|++++.+++..+.+++ .|.. .++. .+..+.+.
T Consensus 65 l~~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~------gda~~~l~ 136 (237)
T 3c3y_A 65 VLKLVNAKKTIEVGVF-TGYSLLLTALSIPDDG-KITAIDFDREAYEIGLPFIRKAGVEHKINFIE------SDAMLALD 136 (237)
T ss_dssp HHHHTTCCEEEEECCT-TSHHHHHHHHHSCTTC-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHH
T ss_pred HHHhhCCCEEEEeCCC-CCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHH
Confidence 3445677899999875 466777788876 45 99999999998877754 3542 1222 23444444
Q ss_pred hhc-----CCCccEEEEcccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMT-----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~-----~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+. .+.+|+||-.... ...++.+.+.|+++ |.++.-.
T Consensus 137 ~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~ 181 (237)
T 3c3y_A 137 NLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN 181 (237)
T ss_dssp HHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred HHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence 432 3479999843332 22467788999998 9887543
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.13 Score=44.59 Aligned_cols=100 Identities=16% Similarity=0.308 Sum_probs=65.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC-cEEEcCCCCCCcCHHHHHHhhc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
....++++++||=+|+|..|..++.+++..+. +|++++.+++..+.+++ .+. -.++..+- ..+ ..+.
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~~----~~~~ 120 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG---GII----KGVV 120 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS---CSS----TTTC
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc---hhh----hhcc
Confidence 34457899999999998778888888887666 99999999998877754 342 22332221 001 1122
Q ss_pred CCCccEEEEcccC-------------------------hHHHHHHHHHhccCCceEEEE
Q 016363 271 DGGADYCFECIGL-------------------------TSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 271 ~~g~D~vid~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~ 304 (390)
.+.+|+|+..-.- ...+..+.+.|+++ |+++.+
T Consensus 121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~ 178 (230)
T 3evz_A 121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY 178 (230)
T ss_dssp CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence 2479999954210 23366777788888 888765
|
| >4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.24 Score=46.61 Aligned_cols=135 Identities=13% Similarity=0.094 Sum_probs=79.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHc--------CCCeEEEe-cCChhhHHH-HHhcCCcEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 204 STVAIFGLGAVGLAVAEGARLN--------RASKIIGV-DINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~--------g~~~Vi~~-~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
=+|.|+|+|.+|...+...+.+ ++ +++++ ++++++.+. ++++|...+. .++.+.+.+ ..
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y-------~d~~ell~~---~~ 94 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERP-RLVHLAEANAGLAEARAGEFGFEKAT-------ADWRALIAD---PE 94 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCC-EEEEEECC--TTHHHHHHHHTCSEEE-------SCHHHHHHC---TT
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCc-EEEEEECCCHHHHHHHHHHhCCCeec-------CCHHHHhcC---CC
Confidence 4799999999998765543322 45 66665 556666554 4668876654 245444432 37
Q ss_pred ccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccc-hHhhhc--ceeEEeeecCCCCchhhHHHHHHHHHcC
Q 016363 274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDK 350 (390)
Q Consensus 274 ~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 350 (390)
+|+|+-|++.....+.+..+|.. |+=|++.-+.....-... .....+ ++.+.-. ........+..+.+++++|
T Consensus 95 iDaV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg--~~~R~~p~~~~~k~~i~~G 170 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAPAYADAERMLATAERSGKVAALG--YNYIQNPVMRHIRKLVGDG 170 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEEC--CGGGGCHHHHHHHHHHHTT
T ss_pred CcEEEECCChHHHHHHHHHHHhc--CCeEEEccCCcccHHHHHHhhhhHHhcCCccccc--cccccChHHHHHHHHHHcC
Confidence 99999999988877888888885 677777643221100000 011122 3333222 2223345678888899988
Q ss_pred CCC
Q 016363 351 ELN 353 (390)
Q Consensus 351 ~~~ 353 (390)
++-
T Consensus 171 ~iG 173 (393)
T 4fb5_A 171 VIG 173 (393)
T ss_dssp TTC
T ss_pred CCc
Confidence 654
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=94.79 E-value=0.073 Score=50.42 Aligned_cols=38 Identities=26% Similarity=0.177 Sum_probs=30.3
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
.+.+.+|||+|+ |.+|...+..+...|. +|+++++...
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~-~V~~~~r~~~ 46 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDNLVR 46 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCHH
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCC-eEEEEEecCc
Confidence 456889999998 9999999998888899 9999987644
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=94.78 E-value=0.064 Score=48.18 Aligned_cols=94 Identities=18% Similarity=0.260 Sum_probs=64.5
Q ss_pred ccccchhhHHHHHHHHhC-CCCCCEEEEEcCC-hHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHhcCCcEEEcCCCC
Q 016363 182 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLG-AVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFINPATC 257 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~-~~~g~~VlI~Gag-~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~ 257 (390)
.+||+...++..+ +..+ --.|.+++|+|.| .+|..+++++... |+ +|+...+..
T Consensus 137 ~~PcTp~gi~~ll-~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~a-tVtv~h~~t-------------------- 194 (281)
T 2c2x_A 137 PLPCTPRGIVHLL-RRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENA-TVTLCHTGT-------------------- 194 (281)
T ss_dssp CCCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCC-EEEEECTTC--------------------
T ss_pred CCCChHHHHHHHH-HHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCC-EEEEEECch--------------------
Confidence 3555444444433 3344 3578999999997 5799999999988 77 888775332
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+||.++|.+. + .--+.++++ ..++.+|..
T Consensus 195 --~~L~~~~~-----~ADIVI~Avg~p~-~-I~~~~vk~G-avVIDVgi~ 234 (281)
T 2c2x_A 195 --RDLPALTR-----QADIVVAAVGVAH-L-LTADMVRPG-AAVIDVGVS 234 (281)
T ss_dssp --SCHHHHHT-----TCSEEEECSCCTT-C-BCGGGSCTT-CEEEECCEE
T ss_pred --hHHHHHHh-----hCCEEEECCCCCc-c-cCHHHcCCC-cEEEEccCC
Confidence 24555543 5899999999876 2 223457777 888888865
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=94.77 E-value=0.063 Score=49.11 Aligned_cols=91 Identities=12% Similarity=0.116 Sum_probs=57.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHHHH---HhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEIG---KKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~---~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+|||+|+ |.+|...++.+...|. +|+++++++. +.+.+ ...+...+. |..+ .+.+.+... ++|+|
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d------~~~l~~a~~-~~d~v 83 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDE------HEKLVELMK-KVDVV 83 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTCSCHHHHHHHHHTTCEEEECCTTC------HHHHHHHHT-TCSEE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCCchhhHHHHhhcCCCEEEEecCCC------HHHHHHHHc-CCCEE
Confidence 47999998 9999999999888898 8999999874 44433 334554332 2222 233433333 69999
Q ss_pred EEcccChH--HHHHHHHHhccCC--ceEE
Q 016363 278 FECIGLTS--VMNDAFNSSREGW--GKTV 302 (390)
Q Consensus 278 id~~g~~~--~~~~~~~~l~~~~--G~~v 302 (390)
|.+++... ....+++.++..+ .+++
T Consensus 84 i~~a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 84 ISALAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp EECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred EECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 99987431 1344555554431 4665
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=94.77 E-value=0.19 Score=44.56 Aligned_cols=76 Identities=22% Similarity=0.210 Sum_probs=52.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+|.|+|+|.+|...+..+...| . +|++.++++++.+.+.+ +|....-+..+ .. .+|+||-|+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~-~v~~~~r~~~~~~~~~~~~g~~~~~~~~~------------~~--~~D~vi~~v~ 66 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEKELGVETSATLPE------------LH--SDDVLILAVK 66 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHHHTCCEEESSCCC------------CC--TTSEEEECSC
T ss_pred EEEEECchHHHHHHHHHHHHCCCC-eEEEECCCHHHHHHHHHhcCCEEeCCHHH------------Hh--cCCEEEEEeC
Confidence 6889999999999888887788 7 89999999998887765 57542211111 11 4677777777
Q ss_pred ChHHHHHHHHHhcc
Q 016363 283 LTSVMNDAFNSSRE 296 (390)
Q Consensus 283 ~~~~~~~~~~~l~~ 296 (390)
+......+..+.+
T Consensus 67 -~~~~~~v~~~l~~ 79 (263)
T 1yqg_A 67 -PQDMEAACKNIRT 79 (263)
T ss_dssp -HHHHHHHHTTCCC
T ss_pred -chhHHHHHHHhcc
Confidence 4445566555543
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
Probab=94.76 E-value=0.068 Score=49.63 Aligned_cols=85 Identities=21% Similarity=0.241 Sum_probs=57.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|+ +|++.++++++. +++. . .+ .++.+.+. ..|+|+.++
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~----~~-----~~l~ell~-----~aDvV~~~~ 206 (331)
T 1xdw_A 145 RNCTVGVVGLGRIGRVAAQIFHGMGA-TVIGEDVFEIKG--IEDY-C----TQ-----VSLDEVLE-----KSDIITIHA 206 (331)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCS--CTTT-C----EE-----CCHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCccHH--HHhc-c----cc-----CCHHHHHh-----hCCEEEEec
Confidence 46799999999999999999999999 999999877543 1111 1 11 13333333 368888776
Q ss_pred cChH----HH-HHHHHHhccCCceEEEEc
Q 016363 282 GLTS----VM-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~----~~-~~~~~~l~~~~G~~v~~g 305 (390)
+... .+ ...+..|+++ ..++.++
T Consensus 207 p~t~~t~~li~~~~l~~mk~g-a~lin~s 234 (331)
T 1xdw_A 207 PYIKENGAVVTRDFLKKMKDG-AILVNCA 234 (331)
T ss_dssp CCCTTTCCSBCHHHHHTSCTT-EEEEECS
T ss_pred CCchHHHHHhCHHHHhhCCCC-cEEEECC
Confidence 6421 11 3566777776 7777776
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=94.76 E-value=0.064 Score=50.88 Aligned_cols=85 Identities=19% Similarity=0.204 Sum_probs=52.1
Q ss_pred hCC-CCCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEecCChhh----------------HHHHHhcCCcEE-EcCCCC
Q 016363 198 AGV-EVGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINPEK----------------FEIGKKFGITDF-INPATC 257 (390)
Q Consensus 198 ~~~-~~g~~VlI~Ga-g~vG~~ai~la~~-~g~~~Vi~~~~~~~~----------------~~~~~~~g~~~v-~~~~~~ 257 (390)
..+ ..++++||+|+ +++|.+.++.+.. .|+ +|++++++.+. .+.+++.|.... +..+-.
T Consensus 41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt 119 (405)
T 3zu3_A 41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF 119 (405)
T ss_dssp CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence 344 45678899998 8999998888777 999 89988765432 123445564432 222221
Q ss_pred CCcCHHHHHHhhc--CCCccEEEEcccC
Q 016363 258 GDKTVSQVIKEMT--DGGADYCFECIGL 283 (390)
Q Consensus 258 ~~~~~~~~i~~~~--~~g~D~vid~~g~ 283 (390)
+..+..+.+.+.. -|++|+++++.|.
T Consensus 120 d~~~v~~~v~~i~~~~G~IDiLVNNAG~ 147 (405)
T 3zu3_A 120 SDEIKQLTIDAIKQDLGQVDQVIYSLAS 147 (405)
T ss_dssp SHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence 1222333333222 2479999999875
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=94.72 E-value=0.16 Score=45.01 Aligned_cols=85 Identities=12% Similarity=0.155 Sum_probs=61.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
-+|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+ +|... . .++.+.+. .+|+||.|+.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~g~~~---~-----~~~~~~~~-----~~D~Vi~~v~ 69 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPY---A-----MSHQDLID-----QVDLVILGIK 69 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCB---C-----SSHHHHHH-----TCSEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhCCC-eEEEECCCHHHHHHHHHHcCCEe---e-----CCHHHHHh-----cCCEEEEEeC
Confidence 379999999999998888888887 89999999988876653 56431 1 23444433 5899999998
Q ss_pred ChHHHHHHHHHhccCCceEEEE
Q 016363 283 LTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 283 ~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
... ....+..++++ ..++..
T Consensus 70 ~~~-~~~v~~~l~~~-~~vv~~ 89 (259)
T 2ahr_A 70 PQL-FETVLKPLHFK-QPIISM 89 (259)
T ss_dssp GGG-HHHHHTTSCCC-SCEEEC
T ss_pred cHh-HHHHHHHhccC-CEEEEe
Confidence 443 67777777654 555554
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.2 Score=45.88 Aligned_cols=69 Identities=19% Similarity=0.273 Sum_probs=50.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC--hhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDIN--PEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~--~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+|.|+|.|.+|...++.+...|..+|++.+++ +++.+.+.+.|.... .+..+.+. ..|+||-|+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~--------~~~~e~~~-----~aDvVi~~v 91 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCK--------ASVAEVAG-----ECDVIFSLV 91 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEEC--------SCHHHHHH-----HCSEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEe--------CCHHHHHh-----cCCEEEEec
Confidence 579999999999998888888887689999996 577888777764321 13333333 367777777
Q ss_pred cChH
Q 016363 282 GLTS 285 (390)
Q Consensus 282 g~~~ 285 (390)
....
T Consensus 92 p~~~ 95 (312)
T 3qsg_A 92 TAQA 95 (312)
T ss_dssp CTTT
T ss_pred Cchh
Confidence 7655
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=94.71 E-value=0.06 Score=49.82 Aligned_cols=77 Identities=12% Similarity=0.098 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEecCChh--hHHHHHhcC---CcEEEcCCCCCCcCHHHHHHhhcCC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPE--KFEIGKKFG---ITDFINPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g--~~~Vi~~~~~~~--~~~~~~~~g---~~~v~~~~~~~~~~~~~~i~~~~~~- 272 (390)
.+.+|||+|+ |.+|...++.+...| . +|+++++... ..+.+..+. .-.++..+- .+ .+.+.++..+
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~~~ 97 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI---QN-GELLEHVIKER 97 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCT---TC-HHHHHHHHHHH
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccchhhhhhhccCCCeEEEEcCC---CC-HHHHHHHHhhc
Confidence 4568999998 999999999888888 5 8888876542 222233221 112222211 11 2233343334
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+||++++.
T Consensus 98 ~~d~Vih~A~~ 108 (346)
T 4egb_A 98 DVQVIVNFAAE 108 (346)
T ss_dssp TCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999874
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.69 E-value=0.11 Score=47.96 Aligned_cols=75 Identities=19% Similarity=0.237 Sum_probs=46.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh--hh---HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EK---FEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADY 276 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~--~~---~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~ 276 (390)
.+|||+|+ |.+|...++.+...|. +|++++++. .. .+.+...+.-.++..+- .+ .+.+.++..+ ++|+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl---~d-~~~~~~~~~~~~~d~ 76 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI---RN-KNDVTRLITKYMPDS 76 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCT---TC-HHHHHHHHHHHCCSE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCccCchhhhhhhccCCceEEEEcCC---CC-HHHHHHHHhccCCCE
Confidence 37999998 9999999998888998 999998642 11 22233223122332211 11 1223333323 6999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
||.+++.
T Consensus 77 vih~A~~ 83 (347)
T 1orr_A 77 CFHLAGQ 83 (347)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999884
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=94.69 E-value=0.077 Score=48.47 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=29.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-Ch
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NP 237 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~ 237 (390)
|.+|||+|+ |.+|...++.+...|+ +|+++++ ++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~ 36 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGY-SVNTTIRADP 36 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCCC-
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCC-EEEEEEeCCc
Confidence 568999998 9999999998888999 9999887 54
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 390 | ||||
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 2e-38 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 2e-38 | |
| d1p0fa1 | 198 | b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro | 2e-38 | |
| d1cdoa1 | 199 | b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase | 1e-37 | |
| d2fzwa1 | 197 | b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase | 8e-36 | |
| d1e3ia1 | 202 | b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase | 1e-34 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 4e-34 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 5e-34 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 5e-33 | |
| d2jhfa1 | 198 | b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase | 7e-33 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 4e-31 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 2e-29 | |
| d1f8fa1 | 194 | b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr | 7e-24 | |
| d1llua1 | 175 | b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase | 6e-20 | |
| d1vj0a1 | 184 | b.35.1.2 (A:2-155,A:338-367) Hypothetical protein | 8e-20 | |
| d1piwa1 | 192 | b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy | 1e-19 | |
| d1uufa1 | 179 | b.35.1.2 (A:3-144,A:313-349) Hypothetical protein | 8e-19 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 2e-18 | |
| d1pl8a1 | 185 | b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor | 5e-17 | |
| d1jvba1 | 177 | b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase | 2e-16 | |
| d1rjwa1 | 171 | b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase | 5e-16 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 1e-14 | |
| d1e3ja1 | 178 | b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor | 3e-14 | |
| d1h2ba1 | 171 | b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas | 4e-13 | |
| d1kola2 | 195 | c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps | 1e-12 | |
| d1kola1 | 201 | b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog | 4e-12 | |
| d1jqba1 | 177 | b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon | 4e-11 | |
| d1pl8a2 | 171 | c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh | 4e-11 | |
| d1e3ja2 | 170 | c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh | 4e-10 | |
| d1piwa2 | 168 | c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase | 4e-09 | |
| d1iz0a1 | 131 | b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase | 9e-07 | |
| d1pqwa_ | 183 | c.2.1.1 (A:) Putative enoyl reductase domain of po | 0.001 | |
| d1gu7a1 | 175 | b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu | 0.001 | |
| d1xa0a1 | 152 | b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo | 0.004 |
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 134 bits (337), Expect = 2e-38
Identities = 71/175 (40%), Positives = 98/175 (56%), Gaps = 1/175 (0%)
Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
P CL+ CG STG GAA K V+ GST +FGLG VGL+V G + AS+IIG+D+
Sbjct: 3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDL 62
Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
N +KFE G T+ I+P K +S+V+ EMT Y FE IG M DA S
Sbjct: 63 NKDKFEKAMAVGATECISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121
Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 350
+G +V++GV ++ + + + GR+ G FGGLK R D+ L ++L K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 133 bits (336), Expect = 2e-38
Identities = 69/172 (40%), Positives = 99/172 (57%), Gaps = 2/172 (1%)
Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
+CL+ CG +TG GAA A V GST A+FGLG VG + G + AS+IIGV + +K
Sbjct: 5 SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDK 64
Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
F + G T+ +NP DK + +VI E T+GG DY EC G M +A S+ G G
Sbjct: 65 FPKAIELGATECLNPKD-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSG 123
Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 351
TV+LG+ + L+ + +L GRS+ G+ FGG K +++ L Y+ K+
Sbjct: 124 VTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKK 174
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 134 bits (338), Expect = 2e-38
Identities = 81/209 (38%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
AGK I CKAA+ P KPL +E I V PPKA E+RIKIL + +C SD + K
Sbjct: 3 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFP 62
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
+ HEAVGVVES+G V VK D V+P+F CG CR CKSS SN C K G +
Sbjct: 63 VILG---HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK 119
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
+ D TSRF +G I++ + S+FTEY+VV V KI P I +
Sbjct: 120 TGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFL--------- 169
Query: 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAV 218
V + + + G G + +
Sbjct: 170 -VSTKLTLDQINKAFELLSSGQGVRSIMI 197
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 132 bits (333), Expect = 1e-37
Identities = 76/200 (38%), Positives = 105/200 (52%), Gaps = 3/200 (1%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
GKVI+CKAA+ KPLVIEEIEV+ P A EIRIKI+ T +CH+D+ K
Sbjct: 3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGK--HKD 60
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
PV+ GHE G+VESVG V E + + V+P+F CGECR C+S K+N C K
Sbjct: 61 GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
P++ +RF + FL S+F++Y+VV+ V KI P + L + +
Sbjct: 121 PDVMSPKETRFTCKGRK-VLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLES 179
Query: 190 GVGAAWKVAGVEVGSTVAIF 209
A + + TV
Sbjct: 180 VNDAIDLMKHGKCIRTVLSL 199
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 128 bits (321), Expect = 8e-36
Identities = 81/199 (40%), Positives = 109/199 (54%), Gaps = 3/199 (1%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
A +VI+CKAA+ GKPL IEEIEV PPKA E+RIKI+ T++CH+D P+
Sbjct: 1 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSG--ADPEG 58
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
PVI GH G+VESVGE V ++K D V+P++ CGEC+ C + K+N C K
Sbjct: 59 CFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQG 118
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST 189
+ DGTSRF KG I H++ S+F+EY+VV V KI P I + +
Sbjct: 119 KGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDE 177
Query: 190 GVGAAWKVAGVEVGSTVAI 208
A + + TV
Sbjct: 178 INKAFELMHSGKSIRTVVK 196
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 125 bits (313), Expect = 1e-34
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
GKVI+CKAAI G PL IEEIEV PPKA E+RI+++ T +C +D+
Sbjct: 3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFP 62
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----G 125
+ HE G+VESVG V K D V+P F C C+ C S +N C K
Sbjct: 63 VVLG---HECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 119
Query: 126 RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 185
+ D TSRF I+HF+ +SSF++Y+VV ++ ++ L + +
Sbjct: 120 PTIDQELMEDRTSRFTCKGRS-IYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHAL 178
Query: 186 GVSTGVGAAWKVAGVEVGSTVAI 208
+ + ++ G ++
Sbjct: 179 PFES---INDAIDLMKEGKSIRT 198
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 122 bits (307), Expect = 4e-34
Identities = 83/176 (47%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
PL CLL CG+STG GAA A +E GS A+FGLG VGLAV G ++ AS+IIGVDI
Sbjct: 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61
Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
N +KF K+FG T+ INP K + +V+ EMTDGG DY FECIG VM A +
Sbjct: 62 NKDKFARAKEFGATECINPQD-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120
Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 351
+GWG +V++GV G I+ +++ GR+ GT FGG K + L +Y+ K+
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 122 bits (306), Expect = 5e-34
Identities = 74/176 (42%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
PL CL+ CG STG G+A KVA V GST A+FGLG VGL+V G + A++IIGVDI
Sbjct: 2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 61
Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
N +KF K+ G T+ +NP K + +V+ EM++GG D+ FE IG M A + +
Sbjct: 62 NKDKFAKAKEVGATECVNPQD-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120
Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 351
E +G +VI+GV +S+N + +L GR+ G FGG K + + L ++ K+
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 119 bits (299), Expect = 5e-33
Identities = 70/176 (39%), Positives = 99/176 (56%), Gaps = 3/176 (1%)
Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
L CL+ CG S+G GAA A V GST A+FGLG VGL+ G ++ AS+II +DI
Sbjct: 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61
Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
N EKF K G TD +NP DK V VI E+T GG DY +C G + A + +
Sbjct: 62 NGEKFPKAKALGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120
Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 351
GWG ++G +++ +++++ GRS+ GT+FGG K + L Y +K+
Sbjct: 121 LGWGSCTVVG--AKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 120 bits (301), Expect = 7e-33
Identities = 77/203 (37%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
AGKVI+CKAA+ KP IEE+EV PPKA E+RIK++ T +C SD + P
Sbjct: 3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL- 61
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
PVI GHEA G+VES+GE V V+ D V+P+F CG+CR CK + N C K
Sbjct: 62 --PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK-NDLSM 118
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL--GIACLLSCGV 187
P + +G IHHFL S+F++Y+VVD V KI L I +L
Sbjct: 119 PRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFE- 177
Query: 188 STGVGAAWKVAGVEVGSTVAIFG 210
+ + + + G ++
Sbjct: 178 --KINEGFDL--LRSGESIRTIL 196
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 114 bits (286), Expect = 4e-31
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234
+P+ + L CG+ TG GA V S+ +G GAVGL+ A++ AS II VD
Sbjct: 1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60
Query: 235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS 294
I + E+ K+ G T IN + IKE+TDGG ++ E G ++ ++
Sbjct: 61 IVESRLELAKQLGATHVINSK---TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117
Query: 295 REGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKE 351
GK ++G G+ + ++L G+++ G G P+ I L + Y +
Sbjct: 118 GI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 109 bits (273), Expect = 2e-29
Identities = 81/176 (46%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Query: 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235
PL CLL CGVSTG GAA A VE GST A+FGLGAVGLA G A +II VD+
Sbjct: 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61
Query: 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295
NP+KFE K FG TDF+NP + +SQV+ +MT+GG D+ EC+G VM +A S
Sbjct: 62 NPDKFEKAKVFGATDFVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120
Query: 296 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 351
+GWG +V++G ++ I+++ GR+ G+ FGG K + + + + YLDK+
Sbjct: 121 KGWGVSVLVGW-TDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 95.8 bits (237), Expect = 7e-24
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 5/193 (2%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
AA+ G ++ +++ P+ E+ +K++ T +CH+D+ +PLP + G
Sbjct: 5 IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK---YPVPLPAVLG 61
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRD 135
HE G++E++G V E++ D V+ + + CG+C C + CS+F GR +
Sbjct: 62 HEGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEG 120
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
+ +G V HF SSF Y++ + VK+T P A
Sbjct: 121 NHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAID 180
Query: 196 KVAGVEVGSTVAI 208
G+ + + I
Sbjct: 181 SRKGITLKPIIKI 193
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 84.2 bits (207), Expect = 6e-20
Identities = 49/194 (25%), Positives = 75/194 (38%), Gaps = 26/194 (13%)
Query: 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIF 75
KAA+ G PL IEE++V P ++ +KI + +CH+D+ + + PLP I
Sbjct: 6 MKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKP-PLPFIP 64
Query: 76 GHEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
GHE VG V +VG V VKE D V +P + CG C C + C
Sbjct: 65 GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQ---------- 114
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
+ + EY + D +V + ++ I ++ +
Sbjct: 115 ------------QNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM 162
Query: 195 WKVAGVEVGSTVAI 208
AG G V
Sbjct: 163 --RAGQIEGRIVLE 174
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 84.1 bits (207), Expect = 8e-20
Identities = 48/202 (23%), Positives = 82/202 (40%), Gaps = 28/202 (13%)
Query: 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 73
++ A + +PLV +E E+ I ++IL +C SDV ++ + P++PLP+
Sbjct: 3 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFR--GEDPRVPLPI 60
Query: 74 IFGHEAVGVVESVGEYVEEVKERD-----LVLPIFHRDCGECRDCKSSKSNTCSKFGRGY 128
I GHE G V V ++ L++ CGEC CK SK + Y
Sbjct: 61 ILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY 120
Query: 129 RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIPLGIACLLSCGV 187
N G S + L+G ++ + V+D T V+K++ I + L
Sbjct: 121 GIN---RGCSEYPHLRG----------CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN 165
Query: 188 STGVGAAWKVAGVEVGSTVAIF 209
A ++ V ++
Sbjct: 166 -----KALELMESREALKVILY 182
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 83.7 bits (206), Expect = 1e-19
Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 22/198 (11%)
Query: 17 KAAICRIPGKPLVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
+ + ++ + +P +I IKI +C SD+ + +P++
Sbjct: 8 EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAG--HWGNMKMPLV 65
Query: 75 FGHEAVGVVESVGEYVEEVKE--RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 132
GHE VG V +G + + + + C EC CK+ C+KF Y
Sbjct: 66 VGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY 125
Query: 133 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVG 192
+++ + Y V VV I +I + + GV
Sbjct: 126 E---------------DGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAF- 169
Query: 193 AAWKVAGVEVGSTVAIFG 210
+ V T+ +
Sbjct: 170 ERMEKGDVRYRFTLVGYD 187
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 81.1 bits (199), Expect = 8e-19
Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 18/193 (9%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KA +PL +I P +++I+I +CHSD+ + ++ P + G
Sbjct: 2 KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVR--SEWAGTVYPCVPG 59
Query: 77 HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
HE VG V +VG+ VE+ DLV + C C +C+ N C Y P +
Sbjct: 60 HEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDE 119
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAA 194
+ +++ VV +V++I I + A ++ +
Sbjct: 120 P--------------GHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGD 165
Query: 195 WKVAGVEVGSTVA 207
K V T+
Sbjct: 166 VKYRFVIDNRTLT 178
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 80.0 bits (196), Expect = 2e-18
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Query: 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234
+PL A +++ ++TG A ++A +E+GS+V + G+GAVGL GA+L A +IIGV
Sbjct: 1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVG 59
Query: 235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS 294
P E K +G TD +N QV+K G D G + ++ A
Sbjct: 60 SRPICVEAAKFYGATDILNY--KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMV 117
Query: 295 REGWGKTVILGVEMHGSPISLNSIE---ILKGRSVCGTYFGGLKPRSD 339
+ G G + G + + +E + +++ G G + R++
Sbjct: 118 KPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.5 bits (187), Expect = 5e-17
Identities = 31/200 (15%), Positives = 60/200 (30%), Gaps = 27/200 (13%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-TFWKSSTDLPKLPLPVIF 75
+ + PG L +E + P E+ +++ +C SDV + + P++
Sbjct: 9 LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 76 GHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
GHEA G VE VG V+ +K D V CK + N P
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDG- 126
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
+ + + K+ ++ + + A+
Sbjct: 127 --------------------NLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKAL---EAF 163
Query: 196 KVAGVEVGSTVAIFGLGAVG 215
+ +G + +
Sbjct: 164 ETFKKGLGLKIML-KCDPSD 182
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 74.6 bits (182), Expect = 2e-16
Identities = 43/198 (21%), Positives = 70/198 (35%), Gaps = 29/198 (14%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK------SSTDLPKLP 70
+A GKPL ++EI V PK ++ IK+ +CHSDV + + +
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 71 LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP 130
LPV GHE G +E VG+ V + DLV + G C C+ + + C
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLC--------D 113
Query: 131 NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 190
+ G + + EY +V + + I + +
Sbjct: 114 SPRWLGINFDGA--------------YAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE 159
Query: 191 VGAAWKVAGVEVGSTVAI 208
+ +G V I
Sbjct: 160 AIDNLENFKA-IGRQVLI 176
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 73.1 bits (178), Expect = 5e-16
Identities = 45/195 (23%), Positives = 66/195 (33%), Gaps = 28/195 (14%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KAA+ +PL I+E+E E+ ++I K LP+I G
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACG-VCHTDLHAAHGDWPVKPKLPLIPG 60
Query: 77 HEAVGVVESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD 135
HE VG+VE VG V +K D V +P + CG C C S + C
Sbjct: 61 HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQ----------- 109
Query: 136 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW 195
+ + EY +VVKI + + + L ++
Sbjct: 110 -----------KNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLE--KINEVFDRML 156
Query: 196 KVAGVEVGSTVAIFG 210
K G G V
Sbjct: 157 K--GQINGRVVLTLE 169
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 69.6 bits (169), Expect = 1e-14
Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 4/176 (2%)
Query: 177 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236
L + + C +T A + G TV I G G +GL AR A +I + +
Sbjct: 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62
Query: 237 PEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR 295
P + ++ ++ G +N + + I ++T G GAD+ E G + + + R
Sbjct: 63 PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122
Query: 296 EGWGKTVILGVEMHGSPISLNSIE--ILKGRSVCGTYFGGLKPRSDIATLAQKYLD 349
G G + GV + P+ E +LK + G + ++ +
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQ 177
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 68.1 bits (165), Expect = 3e-14
Identities = 38/194 (19%), Positives = 71/194 (36%), Gaps = 24/194 (12%)
Query: 18 AAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFG 76
+A+ L +E+ + PK E+ +++ +C SDV +++ + P++ G
Sbjct: 4 SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
HEA G V VG+ V+ +K+ D V C C+ CK K N C
Sbjct: 63 HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDL------------ 110
Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 196
+ + Y V K+ + + S + V A++
Sbjct: 111 ---------TFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD-AFE 160
Query: 197 VAGVEVGSTVAIFG 210
A + +T+ +
Sbjct: 161 AARKKADNTIKVMI 174
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 64.7 bits (156), Expect = 4e-13
Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 26/194 (13%)
Query: 17 KAAICRIPGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVI 74
KAA KPL IE+++ +++ ++I +CH+D+ + +L + LP
Sbjct: 1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 134
GHE VG +E V E VE +++ D V+ G C C++ + C N+
Sbjct: 61 LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHC--------ENLEF 112
Query: 135 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194
G + F E+ V+K+ + + + ++ +
Sbjct: 113 PGLNIDGG--------------FAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL 158
Query: 195 WKVAGVEVGSTVAI 208
K G +G V I
Sbjct: 159 EK--GEVLGRAVLI 170
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 64.1 bits (155), Expect = 1e-12
Identities = 45/193 (23%), Positives = 70/193 (36%), Gaps = 24/193 (12%)
Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
LS + TG A AGV GSTV + G G VGLA A ARL A+ +I D+NP +
Sbjct: 4 LTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR 62
Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGL--------------- 283
K G D + + I + D + +G
Sbjct: 63 LAHAKAQGFEIADLS---LDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAP 119
Query: 284 TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSV-CGTYFG-GLKPRSDIA 341
+V+N +R GK I G+ + P ++++ + S+ G + +
Sbjct: 120 ATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT 178
Query: 342 TLAQKYLDKELNL 354
KY +
Sbjct: 179 -PVMKYNRALMQA 190
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 62.6 bits (151), Expect = 4e-12
Identities = 27/217 (12%), Positives = 60/217 (27%), Gaps = 30/217 (13%)
Query: 17 KAAICRIPGKPLVIEEIEV-------EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL 69
+ + GK + +++I+ + +K++ T++C SD + T
Sbjct: 3 RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG 61
Query: 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR 129
+ V E ++ + + C C++ + T + G
Sbjct: 62 LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121
Query: 130 PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD--ITHVVKITPHIPLGIACLLSCGV 187
G EY +V +++K+ ++ V
Sbjct: 122 YGYVDMGDWTG---------------GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVV 166
Query: 188 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL 224
V + A G F G V + +
Sbjct: 167 GVQVISLDD-APRGYG----EFDAGVPKKFVIDPHKT 198
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 59.2 bits (142), Expect = 4e-11
Identities = 35/205 (17%), Positives = 60/205 (29%), Gaps = 35/205 (17%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
K K L E E +++ ++ L S C SD+ +I G
Sbjct: 2 KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVF--EGALGDRKNMILG 58
Query: 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 136
HEAVG V VG V++ K D V+ + ++ + G++ + +DG
Sbjct: 59 HEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG 118
Query: 137 TSRFRELKGDVIHHFLNISSFTEYSVVDI--THVVKITPHIPLGIACLLSCGVSTGVGAA 194
F EY V+ ++ + + L G
Sbjct: 119 V-------------------FGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHI 156
Query: 195 WKVAGVEVGSTVAIFGLGAVGLAVA 219
+ + L A
Sbjct: 157 --------EEALLLMKDKPKDLIKA 173
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.1 bits (142), Expect = 4e-11
Identities = 23/149 (15%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Query: 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242
LS G+ A + GV +G V + G G +G+ A+ A++++ D++ +
Sbjct: 12 LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66
Query: 243 GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTV 302
K+ G + + + +++ ++ + EC G + + ++R G
Sbjct: 67 AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG---GT 123
Query: 303 ILGVEMHGSPISLNSIEI-LKGRSVCGTY 330
++ V + ++ + ++ + G +
Sbjct: 124 LVLVGLGSEMTTVPLLHAAIREVDIKGVF 152
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 56.1 bits (134), Expect = 4e-10
Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)
Query: 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242
LS GV A + AGV++G+TV + G G +GL A+ A + + E+
Sbjct: 12 LSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR-RLEV 65
Query: 243 GKKFGITDFINPATCGDKTVSQVIK--EMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 300
K G + ++ S + + + +C G + N +R G
Sbjct: 66 AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGT 124
Query: 301 TVILGVEMHGSPISLNSIEILKGRSVCGTY 330
+++G+ + L + + + +
Sbjct: 125 LMLVGMGSQMVTVPLVNA-CAREIDIKSVF 153
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.5 bits (127), Expect = 4e-09
Identities = 37/162 (22%), Positives = 58/162 (35%), Gaps = 10/162 (6%)
Query: 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234
IP +A L CG T V + G G V I GLG +G ++ ++ +
Sbjct: 1 IPSHLAAPLLCGGLT-VYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVIS 58
Query: 235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG-LTSVMNDAFNS 293
+ K E K G +I GD E D C LT + +
Sbjct: 59 RSSRKREDAMKMGADHYIATLEEGD------WGEKYFDTFDLIVVCASSLTDIDFNIMPK 112
Query: 294 SREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335
+ + G+ V + + +SL LK S+ + G +K
Sbjct: 113 AMKVGGRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGSIK 153
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 45.6 bits (107), Expect = 9e-07
Identities = 9/63 (14%), Positives = 22/63 (34%)
Query: 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 76
KA + + G PL + ++ + E+ +++ L +D + P +
Sbjct: 2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGM 61
Query: 77 HEA 79
Sbjct: 62 EVV 64
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 37.3 bits (85), Expect = 0.001
Identities = 24/155 (15%), Positives = 42/155 (27%), Gaps = 4/155 (2%)
Query: 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239
A T + +V + G V I A ++I + K
Sbjct: 3 AATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK 62
Query: 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 299
E+ + G+ + + I E+TDG + G G
Sbjct: 63 REMLSRLGVEYVGD---SRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPG-G 118
Query: 300 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 334
+ + LG + + SL + K S
Sbjct: 119 RFIELGKKDVYADASLGLAALAKSASFSVVDLDLN 153
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 37.4 bits (85), Expect = 0.001
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 13 VIRCKAAICRIPGKP---LVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTFW 60
+I +A + G+P L + E++ E+ +K L + + SD+
Sbjct: 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQI 53
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 35.2 bits (80), Expect = 0.004
Identities = 11/94 (11%), Positives = 30/94 (31%), Gaps = 5/94 (5%)
Query: 17 KAAICRIPGKPLV--IEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVI 74
+A + ++ I ++ ++ +++ +S+ + D +S K+
Sbjct: 5 QAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKD---GLASIPDGKIVKTYP 61
Query: 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCG 108
F V +E D V+ +
Sbjct: 62 FVPGIDLAGVVVSSQHPRFREGDEVIATGYEIGV 95
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 390 | |||
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 100.0 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 100.0 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 100.0 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 100.0 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 100.0 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 100.0 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 100.0 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 100.0 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 100.0 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 100.0 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 100.0 | |
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 100.0 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 100.0 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.98 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.97 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.97 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.97 | |
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.96 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.96 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.95 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.95 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.95 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.94 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.94 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.94 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.94 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.94 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.94 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.94 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.94 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.94 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.93 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.93 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.93 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.93 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.92 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.92 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.92 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.92 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.92 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.91 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.91 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.91 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.91 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.91 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.9 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.89 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.89 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.89 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.88 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.84 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.82 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.67 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.63 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.47 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.0 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 97.95 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.79 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.79 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.77 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.67 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.58 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.55 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.48 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.46 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.46 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.45 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.44 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.41 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.4 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.4 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.4 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 97.38 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.35 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 97.33 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.33 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.32 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 97.32 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.3 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.27 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.24 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.22 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.22 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.19 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.19 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.18 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.17 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.15 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 97.15 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.12 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.11 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 97.11 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.11 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.08 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 97.08 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.06 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 97.04 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.04 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 97.03 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.02 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.01 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.96 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 96.94 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 96.92 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.89 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 96.89 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 96.89 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 96.88 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 96.87 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.83 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 96.82 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 96.78 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 96.78 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.77 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 96.76 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 96.75 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.75 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.74 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.74 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.72 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.72 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.7 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 96.67 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 96.67 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 96.62 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.61 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 96.53 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 96.5 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 96.49 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 96.49 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 96.48 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.43 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.39 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 96.35 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 96.35 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 96.31 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 96.26 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 96.25 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 96.23 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 96.18 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 96.17 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 96.12 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.1 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 96.09 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 96.08 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 96.08 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 95.96 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 95.92 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.91 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 95.9 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.74 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.69 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 95.66 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 95.56 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 95.55 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 95.48 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.48 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.46 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 95.44 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 95.39 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 95.33 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.33 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 95.26 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 95.24 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 95.24 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 95.21 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.14 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 95.03 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 95.02 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 94.89 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 94.86 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 94.85 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 94.67 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 94.66 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 94.62 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 94.59 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.58 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 94.57 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 94.57 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 94.54 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 94.48 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 94.43 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 94.33 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 94.28 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 94.27 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 94.26 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 94.25 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.25 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.21 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.21 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 94.2 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 94.15 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 94.1 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 94.06 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 94.04 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 93.98 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 93.91 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.88 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.86 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 93.86 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.84 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 93.8 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.68 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 93.65 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 93.63 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 93.52 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 93.5 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 93.5 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.44 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 93.42 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 93.38 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 93.34 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 93.32 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 93.32 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 93.3 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 93.25 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 93.21 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 93.19 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 93.13 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 93.09 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 93.09 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 93.06 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.0 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 92.94 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 92.9 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 92.83 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 92.81 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 92.8 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 92.67 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 92.62 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 92.6 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 92.46 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 92.43 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 92.27 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 92.27 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 92.26 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 92.24 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 92.15 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.03 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 91.97 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 91.82 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.74 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 91.68 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 91.67 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 91.61 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 91.6 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 91.56 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 91.4 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 91.34 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 91.19 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 91.18 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 91.16 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 91.11 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 91.07 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 91.06 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 90.86 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 90.83 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 90.73 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 90.69 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 90.69 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.61 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 90.56 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 90.53 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 90.5 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 90.45 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 90.44 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 90.4 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 90.32 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 90.31 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.3 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 90.29 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 90.21 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 90.07 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 89.99 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 89.72 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 89.7 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 89.58 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 89.51 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 89.5 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 89.46 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 89.35 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 89.14 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 89.12 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 89.02 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 88.99 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.9 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 88.89 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 88.86 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 88.8 | |
| d1fcja_ | 302 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 88.71 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.65 | |
| d1z7wa1 | 320 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 88.64 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 88.61 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 88.55 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 88.54 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 88.47 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 88.45 | |
| d1wkva1 | 382 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 88.45 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 88.37 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 88.28 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 88.23 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 88.18 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 88.16 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 88.14 | |
| d1sqga2 | 284 | Ribosomal RNA small subunit methyltransferase B, R | 88.05 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 88.03 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 88.0 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 87.92 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 87.86 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.8 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 87.64 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 87.52 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 87.42 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 87.29 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 87.26 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 87.17 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 87.14 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 87.02 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 86.88 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 86.66 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 86.45 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 86.17 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 86.11 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 86.06 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 86.05 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 85.96 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.91 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 85.78 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 85.73 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 85.73 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 85.7 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 85.69 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 85.67 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 85.64 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 85.63 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 85.28 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 85.26 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.22 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 85.0 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 84.91 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 84.72 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 84.71 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 84.7 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 84.51 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 84.39 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 84.39 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 84.39 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 84.33 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 84.32 | |
| d1ixka_ | 313 | Hypothetical methyltransferase PH1374 {Archaeon Py | 84.08 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 83.95 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 83.94 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 83.4 | |
| d1o58a_ | 293 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 83.3 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 83.24 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 83.15 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 82.88 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 82.42 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 82.27 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 82.22 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 82.09 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 82.07 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 81.93 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 81.87 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 81.86 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 81.76 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 81.55 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 81.31 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 81.17 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 81.13 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 81.08 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 81.06 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 80.86 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 80.77 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 80.75 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 80.62 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 80.04 |
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.4e-37 Score=271.19 Aligned_cols=196 Identities=39% Similarity=0.604 Sum_probs=176.9
Q ss_pred CccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 11 ~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
..+|++||++++++++|++++++++|+|++|||||||.++|||++|++.++|..... .+|.++|||++|+|+++|+++
T Consensus 4 ~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~--~~p~i~GhE~~G~v~~vG~~v 81 (199)
T d1cdoa1 4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD--GFPVVLGHEGAGIVESVGPGV 81 (199)
T ss_dssp TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTT--SCSEECCCCEEEEEEEECTTC
T ss_pred CCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccccc--ccccccccccceEEEEEcCCC
Confidence 568899999999999999999999999999999999999999999999999977666 789999999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
++|++||||++.+..+|+.|.+|+.++++.|.+.......+....+..++ .++|..++++...|+|+||++++++.+++
T Consensus 82 ~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~Ggfaey~~v~~~~~~~ 160 (199)
T d1cdoa1 82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIAVAK 160 (199)
T ss_dssp CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCE-EETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred ceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccce-eeccceeecccccCCceEEEEEchHHEEE
Confidence 99999999999999999999999999999999877665555555554332 34666777777789999999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~ 209 (390)
+|++++++++|++.+++.|++.++......+.|++|||+
T Consensus 161 iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~ 199 (199)
T d1cdoa1 161 IDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199 (199)
T ss_dssp CCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 999999999999999999999999888889999999984
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=100.00 E-value=2.8e-36 Score=262.06 Aligned_cols=196 Identities=40% Similarity=0.615 Sum_probs=171.1
Q ss_pred CccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 11 GKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 11 ~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
...|+|||+++++++++|+++++|+|+|+++||||||+++|||++|+++++|..... .+|.++|||++|+|+++|++|
T Consensus 2 ~~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~--~~p~v~GhE~~G~V~~vG~~V 79 (197)
T d2fzwa1 2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG--CFPVILGHLGAGIVESVGEGV 79 (197)
T ss_dssp CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTC--CSSBCCCCEEEEEEEEECTTC
T ss_pred CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccc--cccccCCcceeeEEEeecCCc
Confidence 356899999999999999999999999999999999999999999999999987666 799999999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+.+++||+|++.+..+|+.|.+|..++++.|.+.......+...+...++ .++|..++++.+.|+|+||+++++.++++
T Consensus 80 ~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~g~GgfAey~vvp~~~~~~ 158 (197)
T d2fzwa1 80 TKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAK 158 (197)
T ss_dssp CSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred eecCCCCEEEEccccccccccccccCccccCccccccccccccCCcccee-ccCCcceecccccccceeEEEechHHEEE
Confidence 99999999999999999999999999999998754433334444332221 35566777777789999999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~ 209 (390)
+|+++++++++.+++++.|++.++.....-+.+++|||+
T Consensus 159 vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi 197 (197)
T d2fzwa1 159 IDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 197 (197)
T ss_dssp CCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred CCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence 999999999999999999999988555556789999884
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=100.00 E-value=2.3e-35 Score=257.99 Aligned_cols=196 Identities=34% Similarity=0.563 Sum_probs=164.8
Q ss_pred CCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 9 ~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
+.+.||+|||++++++++|++++++|+|+|+++||||||.++|||++|+++++|..+. .+|.++|||++|+|+++|+
T Consensus 2 ~~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~---~~P~v~GHE~~G~V~~vG~ 78 (202)
T d1e3ia1 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA---LFPVVLGHECAGIVESVGP 78 (202)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC---CSSBCCCCEEEEEEEEECT
T ss_pred CCCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc---ccccccccccceEEeeecC
Confidence 3568999999999999999999999999999999999999999999999999997653 4899999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCC---CCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR---PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~---~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
+|+++++||||++.+...|+.|.+|..++++.|.+...... .+...........+.|..+++..+.|+|+||+++++
T Consensus 79 ~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~ 158 (202)
T d1e3ia1 79 GVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSE 158 (202)
T ss_dssp TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred CceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEeh
Confidence 99999999999999999999999999999999987554211 111111111111345667777777899999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEc
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG 210 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~G 210 (390)
..++++|++++++.++.+.+++.+++.++ . .+++|++|.|+.
T Consensus 159 ~~l~~lP~~~~~~~~~~~~~~~~~~~~a~-~--~~k~G~~V~vi~ 200 (202)
T d1e3ia1 159 ANLARVDDEFDLDLLVTHALPFESINDAI-D--LMKEGKSIRTIL 200 (202)
T ss_dssp GGEEECCTTSCGGGGEEEEEEGGGHHHHH-H--HHHTTCCSEEEE
T ss_pred hhEEECCCCCCHHHHHHHHHHHHHHHHHH-H--hCCCCCEEEEEE
Confidence 99999999999999888888888888776 2 256899988763
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=100.00 E-value=2.6e-35 Score=255.18 Aligned_cols=191 Identities=25% Similarity=0.482 Sum_probs=156.0
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
++|+|+++.+.+++|+++++++|+|++|||||||.++|||++|++++.|..+. ++|.++|||++|+|+++|+++++|
T Consensus 2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~---~~P~i~GHE~~G~V~~vG~~v~~~ 78 (194)
T d1f8fa1 2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV---PLPAVLGHEGSGIIEAIGPNVTEL 78 (194)
T ss_dssp EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC---CSSBCCCCEEEEEEEEECTTCCSC
T ss_pred ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc---cCCcccccceEEEeeecCccceeE
Confidence 68999999999999999999999999999999999999999999999987653 589999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCccccc-ccCceeeccccccccceeEEeeCCceEEcC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE-LKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~-~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
++||||+.. ..+|+.|.+|++++++.|++.......|...+|...+.. ..+....++...|+|+||.+++...++++|
T Consensus 79 ~vGDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip 157 (194)
T d1f8fa1 79 QVGDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT 157 (194)
T ss_dssp CTTCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred ccCceeeee-cccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECC
Confidence 999999654 558999999999999999974222223333333222211 223344555666899999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEe
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~ 233 (390)
++++++++ +++.|+|++|++++|+++.+|+++|+++
T Consensus 158 ~~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV 193 (194)
T d1f8fa1 158 KDFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI 193 (194)
T ss_dssp TTCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred CCCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 99886543 3456779999999999999999677765
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=100.00 E-value=1.6e-35 Score=253.85 Aligned_cols=172 Identities=23% Similarity=0.340 Sum_probs=152.1
Q ss_pred eEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 17 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
.|++++++++ ++++++|+|+|+++||||||++++||++|++.+++..... ..+.|.++|||++|+|+++|+++++|++
T Consensus 3 maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~ 81 (178)
T d1e3ja1 3 LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK 81 (178)
T ss_dssp EEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT
T ss_pred eEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCC
Confidence 4566788877 9999999999999999999999999999999988754322 2367899999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||||++.+..+|+.|.+|..+..+.|.+.... .+...+ |+|+||+++|+++++++|+++
T Consensus 82 GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~~-------------------G~~aey~~v~~~~~~~iP~~~ 140 (178)
T d1e3ja1 82 GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--ATPPDD-------------------GNLARYYVHAADFCHKLPDNC 140 (178)
T ss_dssp TCEEEECCEECCSSSHHHHTTCGGGCTTCEET--TBTTBC-------------------CSCBSEEEEEGGGEEECCTTC
T ss_pred CCEEEECcccccCCccccccCCccccccccce--eccccc-------------------cccceeeeecccceeeCCCCC
Confidence 99999999999999999999999999876552 122223 589999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL 211 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga 211 (390)
++++++.+++++.|||+++ +.+++++|++|+|+|+
T Consensus 141 ~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~ 175 (178)
T d1e3ja1 141 NVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS 175 (178)
T ss_dssp CCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred CHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence 9999999999999999986 7899999999999975
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=6.6e-35 Score=249.35 Aligned_cols=173 Identities=28% Similarity=0.395 Sum_probs=153.9
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
+|+||||+++++++++|+++++|+|.|++|||||||++++||++|++.++|..+.. ..+|.++|||++|+|+++|++++
T Consensus 2 ~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~-~~~P~i~GhE~~G~V~~~G~~v~ 80 (175)
T d1llua1 2 LPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVK-PPLPFIPGHEGVGYVAAVGSGVT 80 (175)
T ss_dssp CCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSC-CCSSBCCCSCEEEEEEEECTTCC
T ss_pred cchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCcccc-ccCCcCCCCcceEEEEEeCCCcc
Confidence 79999999999999999999999999999999999999999999999999987543 27899999999999999999999
Q ss_pred cCCCCCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 92 EVKERDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 92 ~~~vGd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+|++||||+..+ ...|+.|.+|..+.++.|.+... .|+..+| +|+||++++++++++
T Consensus 81 ~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~---~G~~~~g-------------------g~aey~~v~~~~~~~ 138 (175)
T d1llua1 81 RVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN---TGYSVNG-------------------GYAEYVLADPNYVGI 138 (175)
T ss_dssp SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEECTTTSEE
T ss_pred ccccCCEEEeccccccCCccccccCCcccccccccc---ccccccc-------------------ccceEEEechHHEEE
Confidence 999999998755 45799999999999999987654 4555554 899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~ 209 (390)
+|++++++.++++.+++.|+++.+ + .+..+|++|||+
T Consensus 139 iPd~l~~~~a~~~~~~~~t~~~~~-~-~g~~~G~~VLVl 175 (175)
T d1llua1 139 LPKNVKATIHPGKLDDINQILDQM-R-AGQIEGRIVLEM 175 (175)
T ss_dssp CCTTCCCCEEEECGGGHHHHHHHH-H-TTCCSSEEEEEC
T ss_pred CCCCCChhHHHHHHhHHHHHHHHH-H-hCCCCCCEEEeC
Confidence 999999998888888899988865 3 445579999984
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=100.00 E-value=9.7e-35 Score=252.48 Aligned_cols=193 Identities=42% Similarity=0.626 Sum_probs=163.7
Q ss_pred CCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCC
Q 016363 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
.....||||+++++++++|+++++++|+|++|||||||.++|||++|+++++|..+. .+|.++|||++|+|+++|++
T Consensus 3 ~~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~---~~P~i~GHE~~G~Vv~~G~~ 79 (198)
T d1p0fa1 3 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS---KFPVILGHEAVGVVESIGAG 79 (198)
T ss_dssp TTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC---CSSBCCCCCEEEEEEEECTT
T ss_pred CCCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc---ccccccceeeeeeeeecCcc
Confidence 467889999999999999999999999999999999999999999999999987653 58999999999999999999
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceE
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 169 (390)
++++++||||++.+..+|+.|.+|..++++.|.+.......+...++.. +..+.|..+++..+.|+|+||+.+++..++
T Consensus 80 v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~g~faey~~v~~~~~~ 158 (198)
T d1p0fa1 80 VTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTS-RFTCRGKPIYNLMGTSTFTEYTVVADIAVA 158 (198)
T ss_dssp CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCC-SEEETTEEEBCSTTTCCSBSEEEEETTSEE
T ss_pred cccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCce-eEeeCCeeccccCCCccceeeEEecHHHEE
Confidence 9999999999999999999999999999999998766544444444432 224667777877778999999999999999
Q ss_pred EcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHH
Q 016363 170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGL 216 (390)
Q Consensus 170 ~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~ 216 (390)
++|++++++.++...+.+.+.. +++.|||.|+|++|+
T Consensus 159 kip~~~~~~~~~~~~~~~~~v~----------~~~~vlv~G~G~iGl 195 (198)
T d1p0fa1 159 KIDPKINVNFLVSTKLTLDQIN----------KAFELLSSGQGVRSI 195 (198)
T ss_dssp EECTTSCGGGGEEEEECGGGHH----------HHHHHTTTSSCSEEE
T ss_pred ECCCCCCHHHHHHhhcchhhcC----------CCCEEEEECCCcceE
Confidence 9999999887766655444322 334578888888775
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=1.5e-34 Score=245.68 Aligned_cols=168 Identities=24% Similarity=0.398 Sum_probs=151.4
Q ss_pred eEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++++++||+++++++|++ ++|||||||.+++||++|++.++|..... ...+|.++|||++|+|+++|+++++|+
T Consensus 1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~ 80 (171)
T d1h2ba1 1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 80 (171)
T ss_dssp CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence 7999999999999999999985 68999999999999999999998875421 126899999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||||++.+..+|+.|..|..++++.|.+... .|+..+| +|+||++++++.++++|++
T Consensus 81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~ 138 (171)
T d1h2ba1 81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG-------------------GFAEFMRTSHRSVIKLPKD 138 (171)
T ss_dssp TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEECGGGEEECCTT
T ss_pred CCCEEEEcCccCCCCccccccccccccccccc---ceeeccc-------------------ccceeeeehhhcceecCCC
Confidence 99999999999999999999999999987655 4555554 8999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEE
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAI 208 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI 208 (390)
++++.++++.+++.|||+++ +..++ .|++|||
T Consensus 139 ~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI 170 (171)
T d1h2ba1 139 VRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI 170 (171)
T ss_dssp CCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred CCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence 99998988889999999987 66788 8999998
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=100.00 E-value=1.8e-33 Score=244.95 Aligned_cols=194 Identities=42% Similarity=0.665 Sum_probs=165.5
Q ss_pred CCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 9 KAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 9 ~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
++..++.|||+++++++++|+++++++|+|++|||||||.++|||++|++.++|..+. ++|.++|||++|+|+++|+
T Consensus 2 ~~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~---~~P~i~GHE~~G~Vv~vG~ 78 (198)
T d2jhfa1 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGE 78 (198)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---CSSBCCCCSEEEEEEEECT
T ss_pred CCCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc---ccceecccceeEEEEecCc
Confidence 4677899999999999999999999999999999999999999999999999997653 5899999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
+++++++||||++.+..+|+.|.+|..+..+.|.+.......+...++...+ .+.|..++++.+.|+|+||+++++.++
T Consensus 79 ~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~-~~~g~~~~~~~~~G~fAEy~~v~~~~~ 157 (198)
T d2jhfa1 79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISV 157 (198)
T ss_dssp TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSE-EETTEEEBCSTTTCCSBSEEEEEGGGE
T ss_pred cccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccc-cccCceeccCCCCCcccCeEEeCHHHe
Confidence 9999999999999999999999999999999999877665555544443222 456777888888899999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~ 209 (390)
+++|++++++.++...+++.+...+ ...+++|++|+|+
T Consensus 158 ~~~p~~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi 195 (198)
T d2jhfa1 158 AKIDAAFALDPLITHVLPFEKINEG---FDLLRSGESIRTI 195 (198)
T ss_dssp EECCTTSCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred EECCCCCCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence 9999999988776655555543332 2347889999886
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=8.4e-34 Score=242.85 Aligned_cols=175 Identities=25% Similarity=0.352 Sum_probs=147.1
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
|++.|||+++++++++|+++++++|+|++|||||||.++|||++|+++++|.++.. ++|+++|||++|+|+++|++|+
T Consensus 1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~--~~P~vlGHE~~G~V~~vG~~v~ 78 (184)
T d1vj0a1 1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV--PLPIILGHEGAGRVVEVNGEKR 78 (184)
T ss_dssp CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC--CSSBCCCCEEEEEEEEESSCCB
T ss_pred CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCcc--ccccccceeeeeeeeEEecccc
Confidence 68899999999999999999999999999999999999999999999999987766 7999999999999999999886
Q ss_pred -----cCCCCCEEeeecccCCCCCccccCCCCCC-CcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEee-
Q 016363 92 -----EVKERDLVLPIFHRDCGECRDCKSSKSNT-CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD- 164 (390)
Q Consensus 92 -----~~~vGd~V~~~~~~~~~~c~~c~~~~~~~-c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~- 164 (390)
++++||+|++.+..+|+.|.+|+.+++.. |.++.. .|+...- .....-.|+|+||++++
T Consensus 79 ~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~---~G~~~~~-----------~~~~~~~Gg~ae~~~v~~ 144 (184)
T d1vj0a1 79 DLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGC-----------SEYPHLRGCYSSHIVLDP 144 (184)
T ss_dssp CTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCS-----------SSTTCCCSSSBSEEEECT
T ss_pred ccccccccceeeeEeccccccccChhHhCccccccCCCcee---eccCCCC-----------CCCCCcceeCcCcEEech
Confidence 46899999999999999999999999765 666442 2322110 00001136999999996
Q ss_pred CCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE
Q 016363 165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209 (390)
Q Consensus 165 ~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~ 209 (390)
+.+++++|+++++++ ++++|++++ +.+++++|++|||+
T Consensus 145 ~~~v~~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~ 182 (184)
T d1vj0a1 145 ETDVLKVSEKITHRL------PLKEANKAL-ELMESREALKVILY 182 (184)
T ss_dssp TCCEEEECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred hHcEEECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence 579999999999753 456788876 88999999999997
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-34 Score=245.78 Aligned_cols=173 Identities=19% Similarity=0.270 Sum_probs=148.9
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
.++|++++++++ ++++++++|+|++|||||||.+++||++|++++++.... ...++|.++|||++|+|+++|+++++|
T Consensus 7 ~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~ 85 (185)
T d1pl8a1 7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL 85 (185)
T ss_dssp CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred CCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence 667999999987 999999999999999999999999999999999864321 113689999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||||++.+..+|+.|.+|..++++.|.+.... |.... .|+|+||++++.++++++|+
T Consensus 86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~---g~~~~------------------~G~~aey~~~~~~~~~~lP~ 144 (185)
T d1pl8a1 86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC---ATPPD------------------DGNLCRFYKHNAAFCYKLPD 144 (185)
T ss_dssp CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET---TBTTB------------------CCSCBSEEEEEGGGEEECCT
T ss_pred cccccceecceeccccchhhccchhchhccceee---ecccc------------------cccceEEEEEchHHEEECCC
Confidence 9999999999999999999999999999876552 32221 14899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCCh
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGA 213 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~ 213 (390)
++++++++.++ +.+|++++ +.+++++|++||| |+|+
T Consensus 145 ~~~~~~aa~~p--l~~a~~a~-~~~~~~~G~~VlI-g~GP 180 (185)
T d1pl8a1 145 NVKPLVTHRFP--LEKALEAF-ETFKKGLGLKIML-KCDP 180 (185)
T ss_dssp TCGGGEEEEEE--GGGHHHHH-HHHHTTCCSEEEE-ECCT
T ss_pred CCCHHHHHHHH--HHHHHHHH-HHhCCCCCCEEEE-EeCC
Confidence 99999987654 56778765 7788999999998 6554
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3e-33 Score=241.33 Aligned_cols=181 Identities=22% Similarity=0.264 Sum_probs=151.6
Q ss_pred CccceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 11 GKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 11 ~~~~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
..|.||||+++.++++. +++.+.+.++++++||||||.++|||++|++++.|.++.. .+|+++|||++|+|+++|+
T Consensus 2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~--~~P~i~GHE~~G~Vv~vG~ 79 (192)
T d1piwa1 2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM--KMPLVVGHEIVGKVVKLGP 79 (192)
T ss_dssp CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCC--CSSEECCCCEEEEEEEECT
T ss_pred CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCC--CCCcCcccccccchhhccc
Confidence 46899999999998764 6777877677899999999999999999999999987766 7999999999999999999
Q ss_pred CC-CcCCCCCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC
Q 016363 89 YV-EEVKERDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 166 (390)
Q Consensus 89 ~v-~~~~vGd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 166 (390)
++ +.+++||||+..+ ..+|+.|.+|+.+.++.|.+....+.. ....| ....|+|+||++++++
T Consensus 80 ~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~-~~~~G--------------~~~~Ggfaey~~v~~~ 144 (192)
T d1piwa1 80 KSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ-PYEDG--------------YVSQGGYANYVRVHEH 144 (192)
T ss_dssp TCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSC-BCTTS--------------CBCCCSSBSEEEEEGG
T ss_pred ccccccCCCCeeeEeeeccCCCCchhhhcCCccccccccccccc-ccccc--------------cccccceeeEEEeehH
Confidence 87 5699999997665 447999999999999999886543211 11111 1223599999999999
Q ss_pred ceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE
Q 016363 167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209 (390)
Q Consensus 167 ~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~ 209 (390)
+++++|++++++.|+.+..++.|||+++ +++++++|++|||.
T Consensus 145 ~~~~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~ 186 (192)
T d1piwa1 145 FVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY 186 (192)
T ss_dssp GEEECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred HeEECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence 9999999999988776665578999987 78999999999985
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=100.00 E-value=6.7e-35 Score=248.50 Aligned_cols=171 Identities=20% Similarity=0.159 Sum_probs=144.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||++++++++ ++++++|.|.|+++||||||+++|||++|++.+++..... .+|.++|||++|+|+++|+++++|++
T Consensus 1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~--~~P~i~GhE~~G~V~~vG~~v~~~~v 77 (177)
T d1jqba1 1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--RKNMILGHEAVGEVVEVGSEVKDFKP 77 (177)
T ss_dssp CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCC--CSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCC--CCCccCcceeeEEeeecccccceecC
Confidence 89999999998 9999999999999999999999999999999887766555 68999999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC--CceEEcCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI--THVVKITP 173 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~v~~~p~ 173 (390)
||||++.+..+|+.|.+|+.+.++.|.+.......|...+ |+|+||+++|. .+++++|+
T Consensus 78 GdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~-------------------G~~aEy~~vp~a~~~l~~iP~ 138 (177)
T d1jqba1 78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKD-------------------GVFGEYFHVNDADMNLAILPK 138 (177)
T ss_dssp TCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBC-------------------CSSBSSEEESSHHHHCEECCT
T ss_pred CCcEEEeeeeccccccchhhhhhcccccccccccccCCCC-------------------hhcCeeEEEEhhhCeEEECCC
Confidence 9999999999999999999999999988765444444444 48999999986 47999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHH
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVA 219 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai 219 (390)
++++++++..... ++..+ ++.+||.|+|++|+.++
T Consensus 139 ~~~~~~~~~~~~~---~~~~~--------~~~vlv~g~gp~gl~aa 173 (177)
T d1jqba1 139 DVDLSKLVTHVYH---GFDHI--------EEALLLMKDKPKDLIKA 173 (177)
T ss_dssp TSCGGGGEEEEEE---SGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred CcchHHHHHHHHH---HHHHh--------cCceEEECCCHHHhhee
Confidence 9999887665433 23222 23477778888776543
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.98 E-value=2.9e-32 Score=233.23 Aligned_cols=168 Identities=27% Similarity=0.385 Sum_probs=142.5
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC------CCCCCCcccccceeEEEEEeCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------PKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~------~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
|||++++++|+||+++++++|+|++|||||||.++|||++|+++++|..+. ...++|+++|||++|+|+++|+.
T Consensus 1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~ 80 (177)
T d1jvba1 1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE 80 (177)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence 899999999999999999999999999999999999999999999986432 12368999999999999999999
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCc-e
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH-V 168 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-v 168 (390)
+++|++||||++.+..+|+.|.+|..++++.|.+... .|+..+| +|+||++++..+ +
T Consensus 81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~vp~~~~~ 138 (177)
T d1jvba1 81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG-------------------AYAEYVIVPHYKYM 138 (177)
T ss_dssp CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEESCGGGE
T ss_pred ccccccCceEeeeeccccccccccccccccccCCcce---eeecccc-------------------ccccEEEEEhHHeE
Confidence 9999999999999999999999999999999987654 4555554 899999997655 5
Q ss_pred EEcCCCCCcchhhc-cccchhhHHHHHHHHhCCCCCCEEEE
Q 016363 169 VKITPHIPLGIACL-LSCGVSTGVGAAWKVAGVEVGSTVAI 208 (390)
Q Consensus 169 ~~~p~~~~~~~aa~-~~~~~~tA~~~l~~~~~~~~g~~VlI 208 (390)
+++|+ +++.++++ ...++.+|++++ +..++ .|++|||
T Consensus 139 ~~~~~-~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI 176 (177)
T d1jvba1 139 YKLRR-VKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI 176 (177)
T ss_dssp EECSS-SCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred EECCC-CChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence 55555 44455544 456888999876 66666 5899987
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=1e-31 Score=228.60 Aligned_cols=169 Identities=27% Similarity=0.390 Sum_probs=143.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||++++++++++++++++.|+|++|||||||+++|||++|++++++..... ..+|.++|||++|+|+++|+.++++++
T Consensus 1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~-~~~p~v~GhE~~G~Vv~vG~~v~~~~v 79 (171)
T d1rjwa1 1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVK-PKLPLIPGHEGVGIVEEVGPGVTHLKV 79 (171)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC-CCSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccc-cccccccCCEEEEEEEEecccccCcee
Confidence 8999999999999999999999999999999999999999999988765443 278999999999999999999999999
Q ss_pred CCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 96 RDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 96 Gd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
||||+..+. ..|+.|..|..+..+.|.+... .|...+| +|+||+++++++++++|++
T Consensus 80 GdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~ 137 (171)
T d1rjwa1 80 GDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-------------------GYAEYCRAAADYVVKIPDN 137 (171)
T ss_dssp TCEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGCEECCTT
T ss_pred eeEEeeccccccccccccccCCCccccccccc---cceeccC-------------------ccccceEecHHHEEECCCC
Confidence 999987554 4688999999999999987654 3444444 8999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL 211 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga 211 (390)
++++.|+ +. .+.++++.+ ....+ +|++|||+|.
T Consensus 138 ~~~e~A~-l~-~~~~~~~~~-~~~~~-~G~tVlViG~ 170 (171)
T d1rjwa1 138 TIIEVQP-LE-KINEVFDRM-LKGQI-NGRVVLTLED 170 (171)
T ss_dssp CCEEEEE-GG-GHHHHHHHH-HTTCC-SSEEEEECCC
T ss_pred CCHHHHH-HH-HHHHHHHHH-HhcCC-CCCEEEEeCC
Confidence 9987654 43 466777765 34555 5999999984
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.97 E-value=2.5e-34 Score=250.03 Aligned_cols=191 Identities=21% Similarity=0.253 Sum_probs=153.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-------CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-------KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-------~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
+||++++++++ +++++++.|++ .+|||+|||.+++||++|+++++|..+. .+|.++|||++|+|+++|+
T Consensus 2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~---~~P~v~GHE~~G~Vv~vG~ 77 (201)
T d1kola1 2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA---QVGLVLGHEITGEVIEKGR 77 (201)
T ss_dssp EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC---CTTCBCCCCEEEEEEEECT
T ss_pred cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc---ccceeccceeeeeeecccc
Confidence 69999999998 99999999864 4699999999999999999999987653 5899999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC--C
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI--T 166 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~ 166 (390)
+|++|++||||++.+..+|+.|.+|+.++++.|.+.......+..... ......|+|+||+++|. .
T Consensus 78 ~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~------------~~~~~~Gg~aeyv~vp~~~~ 145 (201)
T d1kola1 78 DVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV------------DMGDWTGGQAEYVLVPYADF 145 (201)
T ss_dssp TCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT------------TSCCBCCCSBSEEEESSHHH
T ss_pred ccccccccceeEEeeeeeccCChhhhCCCccccccccccccccccccc------------CCCccccccccEEEeehHHC
Confidence 999999999999999999999999999999999775433211111000 00011369999999985 3
Q ss_pred ceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC
Q 016363 167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA 227 (390)
Q Consensus 167 ~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~ 227 (390)
++++||++.++.+++.+..++.++++++ ...+.+.++ +|+|++|++++|+||.+|+
T Consensus 146 ~l~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g~----~g~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 146 NLLKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYGE----FDAGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp HCEECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred eEEECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCeE----EeeCHHHHHHHHHHHHcCC
Confidence 7999999877777777766777777765 444444443 4889999999999998885
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.7e-31 Score=226.55 Aligned_cols=166 Identities=24% Similarity=0.323 Sum_probs=136.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||++.+++++||++++++.|+|++|||||||.++|||++|++.+.|..... .+|+++|||++|+|+++|++|+++++
T Consensus 1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~--~~P~i~GhE~~G~V~~vG~~V~~~~v 78 (179)
T d1uufa1 1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT--VYPCVPGHEIVGRVVAVGDQVEKYAP 78 (179)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCC--CSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccc--cccccccccccccchhhccccccCCC
Confidence 8999999999999999999999999999999999999999999999987766 79999999999999999999999999
Q ss_pred CCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 96 RDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 96 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
||+|...+ ..+|+.|++|+.++++.|.++..++.......+ ....|+|+||+++++++++++|++
T Consensus 79 GdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~--------------~~~~GgfaEy~~v~~~~~~~ip~~ 144 (179)
T d1uufa1 79 GDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP--------------GHTLGGYSQQIVVHERYVLRIRVA 144 (179)
T ss_dssp TCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTT--------------SBCCCSSBSEEEEEGGGCEECCCC
T ss_pred CCEEEEcccccccCccccccCcccccCCCccccccccCCCCC--------------cccccccceEEEechHHEEECCCC
Confidence 99997655 458999999999999999987654332222111 111369999999999999999966
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVE 201 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~ 201 (390)
.....+ ..++.+||+++ .++.++
T Consensus 145 ~~~~~~---a~~l~~a~~a~-~~a~v~ 167 (179)
T d1uufa1 145 DIEMIR---ADQINEAYERM-LRGDVK 167 (179)
T ss_dssp CEEEEC---GGGHHHHHHHH-HTTCSS
T ss_pred CcChhH---hchhHHHHHHH-HHhCcc
Confidence 433222 23567788876 445543
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.6e-29 Score=209.75 Aligned_cols=147 Identities=18% Similarity=0.217 Sum_probs=131.9
Q ss_pred ceeeEEEeecCCCC--cEEE-EeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 14 IRCKAAICRIPGKP--LVIE-EIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 14 ~t~~a~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
+.|||++++++|+| +++. +++.|+|++|||||||.+++||++|++.+.|..... ..+|.++|||++|+|+++|+++
T Consensus 1 ~~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~-~~~p~i~G~e~~G~V~~vG~~v 79 (150)
T d1yb5a1 1 KLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRK-PLLPYTPGSDVAGVIEAVGDNA 79 (150)
T ss_dssp CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCC-CCSSBCCCSCEEEEEEEECTTC
T ss_pred CceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCcc-ccccccCccceeeeeEeeccee
Confidence 46999999999876 7764 689999999999999999999999999999877654 3789999999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
++|++||||++... ..|+|+||++++++.+++
T Consensus 80 ~~~~vGdrV~~~~~------------------------------------------------~~G~~ae~~~v~~~~~~~ 111 (150)
T d1yb5a1 80 SAFKKGDRVFTSST------------------------------------------------ISGGYAEYALAADHTVYK 111 (150)
T ss_dssp TTCCTTCEEEESCC------------------------------------------------SSCSSBSEEEEEGGGEEE
T ss_pred eccccCcccccccc------------------------------------------------cccccccccccccccccc
Confidence 99999999986432 125899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~ 209 (390)
+|+++++++|++++++..|+|+++......+.|+++||+
T Consensus 112 iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL 150 (150)
T d1yb5a1 112 LPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150 (150)
T ss_dssp CCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred ccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence 999999999999999999999999888999999999984
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.96 E-value=3.1e-28 Score=207.33 Aligned_cols=173 Identities=30% Similarity=0.521 Sum_probs=157.1
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++++.|+.++|++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++++
T Consensus 1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~ 80 (174)
T d1f8fa2 1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS 80 (174)
T ss_dssp SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence 35678999999999999999899999999999999999999999999999999888899999999999999999999998
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 333 (390)
++ .++.+.+++++++++|+||||+|.+..++.+++.++++ |+++.+|........+++...++. +++++|+.+++
T Consensus 81 ~~---~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~ 156 (174)
T d1f8fa2 81 KT---QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS 156 (174)
T ss_dssp TT---SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGG
T ss_pred CC---cCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecC
Confidence 87 78999999999889999999999998889999999999 999999976655566777766555 99999998888
Q ss_pred CCchhhHHHHHHHHHcCC
Q 016363 334 LKPRSDIATLAQKYLDKE 351 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~ 351 (390)
...+++++++++++++||
T Consensus 157 ~~~~~~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 157 GSPKKFIPELVRLYQQGK 174 (174)
T ss_dssp SCHHHHHHHHHHHHHTTS
T ss_pred CChHHHHHHHHHHHHcCC
Confidence 777889999999999985
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.95 E-value=2.2e-27 Score=201.83 Aligned_cols=174 Identities=40% Similarity=0.685 Sum_probs=150.4
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
+|.+||.+.|++.|||+++.+.+++++||+|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++|+.
T Consensus 1 ~P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~ 80 (174)
T d1p0fa2 1 APLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK 80 (174)
T ss_dssp CCGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence 35679999999999999988899999999999999999999999999999988999999999999999999999999876
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (390)
+ .+....+..+..+++|+|++||++|...+.+.++..+++++|+++.+|.......+++++..+++++++.|+.+++..
T Consensus 81 ~-~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~ 159 (174)
T d1p0fa2 81 D-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK 159 (174)
T ss_dssp G-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred C-chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCC
Confidence 5 122344555555555999999999999988999988877448999999877777788887777788999999887654
Q ss_pred chhhHHHHHHHHHcCC
Q 016363 336 PRSDIATLAQKYLDKE 351 (390)
Q Consensus 336 ~~~~~~~~~~~~~~~~ 351 (390)
.++++++++++++||
T Consensus 160 -~~d~~~lidl~~~gK 174 (174)
T d1p0fa2 160 -GEEVSRLVDDYMKKK 174 (174)
T ss_dssp -GGGHHHHHHHHHTTS
T ss_pred -HHHHHHHHHHHHcCC
Confidence 458999999999985
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.95 E-value=8.4e-27 Score=197.90 Aligned_cols=173 Identities=40% Similarity=0.776 Sum_probs=149.1
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++||.++|++.|+|+++.+.+++++||+|||+|+|++|++++|+++.+|+++|++++.+++|++.++++|+++++++.
T Consensus 2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~ 81 (174)
T d1e3ia2 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR 81 (174)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence 56789999999999999988899999999999999999999999999999998999999999999999999999999865
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (390)
. .+.......+...++|+|+||||+|.+.+++.+++++++++|+++.+|... ...++++..++.++++.|+..++..
T Consensus 82 ~-~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~--~~~~i~~~~~~~~k~i~Gs~~Gs~~ 158 (174)
T d1e3ia2 82 E-LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--DEMTIPTVDVILGRSINGTFFGGWK 158 (174)
T ss_dssp G-CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS--SEEEEEHHHHHTTCEEEECSGGGCC
T ss_pred c-chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC--CccccchHHHhccCEEEEEEeeCCC
Confidence 4 112334444444445999999999999989999999998439999999754 3456767767778899999988888
Q ss_pred chhhHHHHHHHHHcCC
Q 016363 336 PRSDIATLAQKYLDKE 351 (390)
Q Consensus 336 ~~~~~~~~~~~~~~~~ 351 (390)
..++++++++++++||
T Consensus 159 ~~~d~p~li~l~~~GK 174 (174)
T d1e3ia2 159 SVDSVPNLVSDYKNKK 174 (174)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHCcC
Confidence 8899999999999985
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=3.6e-27 Score=194.88 Aligned_cols=141 Identities=19% Similarity=0.217 Sum_probs=122.9
Q ss_pred eEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
+.++++++|+| |++++.+.|.|++|||+|||.+++||++|+++++|..+.. .+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~ 79 (147)
T d1qora1 2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPP--SLPSGLGTEAAGIVSKVGSGVKHIK 79 (147)
T ss_dssp EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCS--SSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCC--cceeeeccccccceeeeeeeccccc
Confidence 46889999987 9999999999999999999999999999999999988766 7999999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||||+.... ..|+|+||++++.+.++++|++
T Consensus 80 vGdrV~~~~~------------------------------------------------~~G~~ae~~~v~~~~~~~~P~~ 111 (147)
T d1qora1 80 AGDRVVYAQS------------------------------------------------ALGAYSSVHNIIADKAAILPAA 111 (147)
T ss_dssp TTCEEEESCC------------------------------------------------SSCCSBSEEEEEGGGEEECCTT
T ss_pred ccceeeeecc------------------------------------------------ccccceeEEEEehHHeEEcCcc
Confidence 9999974221 1258999999999999999999
Q ss_pred CCcchh--hccccchhhHHHHHHHHhCCCCCCEEEE
Q 016363 175 IPLGIA--CLLSCGVSTGVGAAWKVAGVEVGSTVAI 208 (390)
Q Consensus 175 ~~~~~a--a~~~~~~~tA~~~l~~~~~~~~g~~VlI 208 (390)
++++++ +++++...++++++. ..++++|++|||
T Consensus 112 ~~~~~a~a~~~~~~~~~~~~~l~-~~~~~~G~~VLI 146 (147)
T d1qora1 112 IKVDVAEQQKYPLKDAQRAHEIL-ESRATQGSSLLI 146 (147)
T ss_dssp SCCCCCGGGEEEGGGHHHHHHHH-HTTCCCBCCEEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEe
Confidence 988755 445666777777774 478999999998
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=1.4e-27 Score=192.58 Aligned_cols=131 Identities=18% Similarity=0.178 Sum_probs=117.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||++++++|+++++++++.|+|++|||+||++++|||++|++.++|.+... ..+|+++|||++|+| +
T Consensus 1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~-~~~P~v~G~E~~G~V-----------v 68 (131)
T d1iz0a1 1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTR-LHPPFIPGMEVVGVV-----------E 68 (131)
T ss_dssp CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC-CCSSBCCCCEEEEEE-----------T
T ss_pred CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEecccccccccccccccc-ccceeEeeeeeEEee-----------c
Confidence 8999999999999999999999999999999999999999999999987554 278999999999999 3
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++... .|+|+||++++++.++++|+++
T Consensus 69 Gd~V~~~~~-------------------------------------------------~G~~aey~~v~~~~~~~~P~~~ 99 (131)
T d1iz0a1 69 GRRYAALVP-------------------------------------------------QGGLAERVAVPKGALLPLPEGR 99 (131)
T ss_dssp TEEEEEECS-------------------------------------------------SCCSBSEEEEEGGGCEECCTTC
T ss_pred cceEEEEec-------------------------------------------------cCccceeeeeCHHHeEEccCCC
Confidence 999987532 1589999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEE
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 209 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~ 209 (390)
++++||++++++.|||+++.++. +.|++||++
T Consensus 100 ~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l 131 (131)
T d1iz0a1 100 PVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL 131 (131)
T ss_dssp CCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence 99999999999999999986554 569999873
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.94 E-value=9.7e-27 Score=197.70 Aligned_cols=170 Identities=27% Similarity=0.428 Sum_probs=147.9
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++++|+.++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++++
T Consensus 1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~ 79 (174)
T d1jqba2 1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY 79 (174)
T ss_dssp SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence 57899999999999999987 77999999999999999999999999999999889999999999999999999999998
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh---hhcceeEEeee
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE---ILKGRSVCGTY 330 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~---~~~~~~i~g~~ 330 (390)
++ .++.+.+++++++ |+|+||||+|++..++.++++++++ |+++.+|.......++++... +.+++++.|+.
T Consensus 80 ~~---~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 155 (174)
T d1jqba2 80 KN---GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL 155 (174)
T ss_dssp GG---SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred cc---hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence 87 7899999999998 9999999999988799999999999 999999977665555554433 34477888886
Q ss_pred cCCCCchhhHHHHHHHHHcCC
Q 016363 331 FGGLKPRSDIATLAQKYLDKE 351 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~ 351 (390)
.+.. +..+++++++++.||
T Consensus 156 ~~~~--r~~~e~l~~li~~gk 174 (174)
T d1jqba2 156 CPGG--RLRAERLRDMVVYNR 174 (174)
T ss_dssp CCCH--HHHHHHHHHHHHTTS
T ss_pred CCCC--cccHHHHHHHHHcCC
Confidence 5542 345677888888875
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=6.4e-27 Score=199.21 Aligned_cols=166 Identities=20% Similarity=0.269 Sum_probs=146.0
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+|+++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +||+++++++|.++++++|+++++|
T Consensus 1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~ 79 (174)
T d1yb5a2 1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN 79 (174)
T ss_dssp SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence 6899999999999999999988899999999999997 9999999999999999 9999999999999999999999999
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~ 331 (390)
+++ .++.+.+++.+++ ++|+|||++|+.. ++.++++++++ |+++.+|... ..++++..++. ++++.|+.+
T Consensus 80 ~~~---~~~~~~i~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~---~~~~~~~~~~~k~~~i~g~~~ 151 (174)
T d1yb5a2 80 HRE---VNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHG-GRVIVVGSRG---TIEINPRDTMAKESSIIGVTL 151 (174)
T ss_dssp TTS---TTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEE-EEEEECCCCS---CEEECTHHHHTTTCEEEECCG
T ss_pred ccc---ccHHHHhhhhhccCCceEEeecccHHH-HHHHHhccCCC-CEEEEEecCC---CCCCCHHHHHHCCCEEEEEEe
Confidence 987 8999999999988 9999999999765 99999999999 9999998543 34555555554 999999976
Q ss_pred CCCCchhhHHHHHHHHHcC
Q 016363 332 GGLKPRSDIATLAQKYLDK 350 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~ 350 (390)
+.. ..+++++++++++++
T Consensus 152 ~~~-~~~~~~~~~~~l~~g 169 (174)
T d1yb5a2 152 FSS-TKEEFQQYAAALQAG 169 (174)
T ss_dssp GGC-CHHHHHHHHHHHHHH
T ss_pred cCC-CHHHHHHHHHHHHHH
Confidence 543 256788888887764
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=3.1e-27 Score=196.39 Aligned_cols=149 Identities=15% Similarity=0.132 Sum_probs=126.6
Q ss_pred ceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 14 IRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 14 ~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
.+|||+++.+++++ ++++++++|+|++|||||||.++|||++|++.+.|..+... ..|.++|+|++|+|++ ..++
T Consensus 2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~-~~p~v~g~e~~G~v~~--~~~~ 78 (152)
T d1xa0a1 2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVK-TYPFVPGIDLAGVVVS--SQHP 78 (152)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCC-SSSBCCCSEEEEEEEE--CCSS
T ss_pred CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccc-cccceeeeeeeeeeec--cCCC
Confidence 47999999999886 45789999999999999999999999999999988766542 7899999999999999 4457
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
.|++||+|+..... .+...+ |+|+||+++|++.++++
T Consensus 79 ~~~~g~~v~~~~~~------------------------~~~~~~-------------------G~~aEy~~v~~~~~~~i 115 (152)
T d1xa0a1 79 RFREGDEVIATGYE------------------------IGVTHF-------------------GGYSEYARLHGEWLVPL 115 (152)
T ss_dssp SCCTTCEEEEESTT------------------------BTTTBC-------------------CSSBSEEEECGGGCEEC
T ss_pred ccccCCEEEEecCc------------------------cccccC-------------------CCcceeeeehhhccccC
Confidence 89999999865321 122222 58999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEc
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG 210 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~G 210 (390)
|++++ .+||+++++.+|||.++....+++ |++|||+|
T Consensus 116 P~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~ 152 (152)
T d1xa0a1 116 PKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA 152 (152)
T ss_dssp CTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred CCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence 99998 478889889999998888888886 99999975
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.94 E-value=4e-26 Score=194.58 Aligned_cols=174 Identities=44% Similarity=0.746 Sum_probs=147.3
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++||.++|++.|||+++.+.+++++||+|||+|+|++|++++|+++.+|+++|++++++++|+++++++|+++++++.
T Consensus 2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~ 81 (176)
T d2fzwa2 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence 46789999999999999998889999999999999999999999999999988999999999999999999999999886
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC-CCcccchHhhhcceeEEeeecCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-SPISLNSIEILKGRSVCGTYFGGL 334 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~ 334 (390)
+ .+.+..+.+++.+++++|+|||++|.....+.+...++++ |.++.++..... ......+..+.+++++.|+.+++.
T Consensus 82 ~-~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~ 159 (176)
T d2fzwa2 82 D-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGW 159 (176)
T ss_dssp G-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred c-hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCC
Confidence 5 2234556666666669999999999999788899999887 777766544333 333344555667899999998888
Q ss_pred CchhhHHHHHHHHHcCC
Q 016363 335 KPRSDIATLAQKYLDKE 351 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~~~ 351 (390)
...+++.++++++++||
T Consensus 160 ~~~~d~~~li~l~~~GK 176 (176)
T d2fzwa2 160 KSVESVPKLVSEYMSKK 176 (176)
T ss_dssp CHHHHHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHcCC
Confidence 88889999999999986
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.94 E-value=2.3e-26 Score=195.70 Aligned_cols=172 Identities=38% Similarity=0.658 Sum_probs=151.9
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+++++|+.+||+++.+++|++.++++|+++++|+.
T Consensus 3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~ 82 (176)
T d1d1ta2 3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK 82 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence 47899999999999999988889999999999999999999999999999987999999999999999999999999977
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 334 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (390)
+ .....+.+.+.+.+ |+|++||++|.......++..+.+++|+++.+|.........+++..++++++++|+.+++.
T Consensus 83 ~--~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~ 160 (176)
T d1d1ta2 83 D--STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGL 160 (176)
T ss_dssp G--CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred c--cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCC
Confidence 6 23345666666666 99999999999987888888776655999999987777777888877888999999999888
Q ss_pred CchhhHHHHHHHHHc
Q 016363 335 KPRSDIATLAQKYLD 349 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~ 349 (390)
..+++++++++++.+
T Consensus 161 ~~~~dip~li~~~~~ 175 (176)
T d1d1ta2 161 KSRDDVPKLVTEFLA 175 (176)
T ss_dssp CHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHhC
Confidence 888999999998764
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.94 E-value=6.4e-27 Score=200.88 Aligned_cols=173 Identities=20% Similarity=0.204 Sum_probs=149.3
Q ss_pred chhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCC
Q 016363 178 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256 (390)
Q Consensus 178 ~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~ 256 (390)
+|||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +||++++++++.+.++++|+++++++++
T Consensus 1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~ 79 (183)
T d1pqwa_ 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS 79 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence 4899999999999999989899999999999987 9999999999999999 9999999999999999999999999887
Q ss_pred CCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCC
Q 016363 257 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 257 ~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (390)
.++.+.+++++++ |+|++||++|++. ++.++++++++ |+++.+|.........+....+.++.++.++.+....
T Consensus 80 ---~~~~~~v~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (183)
T d1pqwa_ 80 ---VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNL 154 (183)
T ss_dssp ---STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred ---cCHHHHHHHHhCCCCEEEEEecccchH-HHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEcccee
Confidence 8999999999988 9999999999876 99999999999 9999999665444444555556678888877543211
Q ss_pred ------chhhHHHHHHHHHcCCCCCcc
Q 016363 336 ------PRSDIATLAQKYLDKELNLGE 356 (390)
Q Consensus 336 ------~~~~~~~~~~~~~~~~~~~~~ 356 (390)
.++.++++++++++|++++.+
T Consensus 155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P 181 (183)
T d1pqwa_ 155 KLQPARYRQLLQHILQHVADGKLEVLP 181 (183)
T ss_dssp HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence 135688899999999988754
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.94 E-value=1.5e-25 Score=191.06 Aligned_cols=175 Identities=42% Similarity=0.762 Sum_probs=145.7
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++||.++|++.|||+++.+.+++++||+|||+|+|++|++++++++..|+.+|++++++++|.++++++|+++++++.
T Consensus 2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~ 81 (176)
T d2jhfa2 2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence 46789999999999999998999999999999999999999999999999988999999999999999999999999875
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (390)
+ .+....+.++...++|+|++||++|.....+.++..+++++|.++..+...........+..+++++++.|+.+++..
T Consensus 82 ~-~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~ 160 (176)
T d2jhfa2 82 D-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK 160 (176)
T ss_dssp G-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred C-chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCC
Confidence 4 122344444444445999999999999988899999998734555554444444444555666779999999988888
Q ss_pred chhhHHHHHHHHHcCC
Q 016363 336 PRSDIATLAQKYLDKE 351 (390)
Q Consensus 336 ~~~~~~~~~~~~~~~~ 351 (390)
.+++++++++++++||
T Consensus 161 ~~~~~~~li~~~~~GK 176 (176)
T d2jhfa2 161 SKDSVPKLVADFMAKK 176 (176)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHCcC
Confidence 8899999999999885
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.94 E-value=4.4e-26 Score=193.28 Aligned_cols=167 Identities=22% Similarity=0.279 Sum_probs=149.5
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+|+.+||.++|++.|||+++ ++.++++|++|||+|+ |++|++++|+++.+|..+|++++++++|+++++++|++++++
T Consensus 1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~ 79 (170)
T d1jvba2 1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN 79 (170)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence 57899999999999999987 7799999999999997 999999999999999779999999999999999999999999
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
+.+ .++.+.+++.+.+ ++|++|||+|+...++.++++++++ |+++.+|..... .+++...+ .+++++.|++.
T Consensus 80 ~~~---~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~i~i~Gs~~ 153 (170)
T d1jvba2 80 ASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGAD--LHYHAPLITLSEIQFVGSLV 153 (170)
T ss_dssp TTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCC--CCCCHHHHHHHTCEEEECCS
T ss_pred cCC---cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccCc--cccCHHHHHhCCcEEEEEec
Confidence 877 7899999999888 8999999999998889999999999 999999976543 45555444 44999999976
Q ss_pred CCCCchhhHHHHHHHHHcCC
Q 016363 332 GGLKPRSDIATLAQKYLDKE 351 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~ 351 (390)
++ +++++++++++++||
T Consensus 154 ~~---~~d~~~~l~lv~~GK 170 (170)
T d1jvba2 154 GN---QSDFLGIMRLAEAGK 170 (170)
T ss_dssp CC---HHHHHHHHHHHHTTS
T ss_pred CC---HHHHHHHHHHHHcCC
Confidence 65 688999999999986
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=5.6e-26 Score=194.76 Aligned_cols=170 Identities=22% Similarity=0.319 Sum_probs=146.7
Q ss_pred cchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCC
Q 016363 177 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256 (390)
Q Consensus 177 ~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~ 256 (390)
+..+|.+.|+.+|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|+++++++.+
T Consensus 3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~ 82 (182)
T d1vj0a2 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE 82 (182)
T ss_dssp HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc
Confidence 45678889999999999988889999999999999999999999999999878999999999999999999999999877
Q ss_pred CCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh--hhcceeEEeeecCC
Q 016363 257 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE--ILKGRSVCGTYFGG 333 (390)
Q Consensus 257 ~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~--~~~~~~i~g~~~~~ 333 (390)
.+..++.+.+.+++++ |+|+||||+|++..++.++++++++ |+++.+|...+...+++++.. +.+++++.|++.++
T Consensus 83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~ 161 (182)
T d1vj0a2 83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD 161 (182)
T ss_dssp SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence 2222345667788888 9999999999988799999999999 999999977666667776643 34599999997654
Q ss_pred CCchhhHHHHHHHHHcC
Q 016363 334 LKPRSDIATLAQKYLDK 350 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~ 350 (390)
.+++++++++++++
T Consensus 162 ---~~~~~~~~~~i~~~ 175 (182)
T d1vj0a2 162 ---TSHFVKTVSITSRN 175 (182)
T ss_dssp ---HHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHHC
Confidence 67899999999876
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.93 E-value=4e-25 Score=188.15 Aligned_cols=173 Identities=43% Similarity=0.780 Sum_probs=145.0
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++||.++|++.|+|+++.+.+++++||+|+|+|+|++|++++++++..++.+|++++++++|++.++++|+++++|+.
T Consensus 2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~ 81 (175)
T d1cdoa2 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 81 (175)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence 47889999999999999998899999999999999999999999999999988999999999999999999999999976
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 334 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (390)
+ +.+..+.+.+.+.+ |+|++||++|....++.++..++++++.++..|... .......+..+.++++++|+..++.
T Consensus 82 ~--~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~-~~~~~~~~~~~~~~~~i~Gs~~G~~ 158 (175)
T d1cdoa2 82 D--HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD-LHDVATRPIQLIAGRTWKGSMFGGF 158 (175)
T ss_dssp G--CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS-SSCEEECHHHHHTTCEEEECSGGGC
T ss_pred C--cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC-CcccCccHHHHHCCcEEEEEEEeCC
Confidence 5 23455666666655 999999999999878888888887734555555433 3333344444666899999998888
Q ss_pred CchhhHHHHHHHHHcCC
Q 016363 335 KPRSDIATLAQKYLDKE 351 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~~~ 351 (390)
..+++++++++++++||
T Consensus 159 ~~~~d~~~~i~l~~~gK 175 (175)
T d1cdoa2 159 KGKDGVPKMVKAYLDKK 175 (175)
T ss_dssp CHHHHHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHcCC
Confidence 88899999999999985
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.93 E-value=5.6e-25 Score=186.67 Aligned_cols=165 Identities=19% Similarity=0.310 Sum_probs=143.8
Q ss_pred CcchhhccccchhhHHHHHHHHh-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~-~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
.+.++|.++++++|||+++.+.. .+++|++|||+|+|++|++++|+++.+|+.+|++++++++|+++++++|+++++++
T Consensus 5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~ 84 (172)
T d1h2ba2 5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDA 84 (172)
T ss_dssp HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecC
Confidence 35788999999999999997665 48999999999999999999999999998899999999999999999999999998
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (390)
.+ +..+.+.+.+.+ ++|+||||+|+...++.+++.++++ |+++.+|... ..+++...++. +++++|+..+
T Consensus 85 ~~----~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~---~~~~~~~~l~~k~~~i~Gs~~~ 156 (172)
T d1h2ba2 85 RR----DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG---ELRFPTIRVISSEVSFEGSLVG 156 (172)
T ss_dssp TS----CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS---CCCCCHHHHHHTTCEEEECCSC
T ss_pred cc----cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc---cccCCHHHHHhCCcEEEEEEec
Confidence 76 556666777777 9999999999998899999999999 9999999533 34566555444 9999999766
Q ss_pred CCCchhhHHHHHHHHHcCC
Q 016363 333 GLKPRSDIATLAQKYLDKE 351 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~ 351 (390)
+ +++++++++++++||
T Consensus 157 ~---~~d~~~~l~l~~~GK 172 (172)
T d1h2ba2 157 N---YVELHELVTLALQGK 172 (172)
T ss_dssp C---HHHHHHHHHHHHTTS
T ss_pred C---HHHHHHHHHHHHcCC
Confidence 5 678999999999985
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=6.9e-25 Score=185.97 Aligned_cols=167 Identities=16% Similarity=0.325 Sum_probs=140.5
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+|+++||.+ .++++||+++ +++++++||+|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++
T Consensus 1 vS~e~Aal~-epla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~ 78 (171)
T d1pl8a2 1 VTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI 78 (171)
T ss_dssp SCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHH-HHHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence 578898876 4789999987 78999999999999999999999999999999889999999999999999999999988
Q ss_pred CCCCCcCHHHHHHhh---cCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeee
Q 016363 255 ATCGDKTVSQVIKEM---TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTY 330 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~---~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~ 330 (390)
.+ .+..+..+.+ .+.++|+||||+|++..++.++++++++ |+++.+|..... .+++...+. ++++++|++
T Consensus 79 ~~---~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~~--~~~~~~~~~~k~l~i~Gs~ 152 (171)
T d1pl8a2 79 SK---ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEM--TTVPLLHAAIREVDIKGVF 152 (171)
T ss_dssp SS---CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSC--CCCCHHHHHHTTCEEEECC
T ss_pred cc---cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCCC--CccCHHHHHHCCcEEEEEe
Confidence 77 4544443332 3338999999999999899999999999 999999976543 455555554 499999985
Q ss_pred cCCCCchhhHHHHHHHHHcCCCC
Q 016363 331 FGGLKPRSDIATLAQKYLDKELN 353 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~ 353 (390)
.+ .++++++++++++|+++
T Consensus 153 ~~----~~~~~~al~li~~gkid 171 (171)
T d1pl8a2 153 RY----CNTWPVAISMLASKSVN 171 (171)
T ss_dssp SC----SSCHHHHHHHHHTTSCC
T ss_pred CC----HhHHHHHHHHHHcCCCC
Confidence 32 35799999999999874
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.92 E-value=8.7e-25 Score=184.41 Aligned_cols=164 Identities=21% Similarity=0.312 Sum_probs=142.9
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++++||.++|+++|||+++ +.+++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|++.++++|+++++++
T Consensus 1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~ 78 (166)
T d1llua2 1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA 78 (166)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence 57899999999999999998 67999999999999999999999999999998 99999999999999999999999998
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 333 (390)
.+ .++.+.+.+.+. +.|.+++++++...++.++++++++ |+++.+|.... ..+++...++ +++++.|+..++
T Consensus 79 ~~---~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~Gs~~~~ 151 (166)
T d1llua2 79 RQ---EDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPG--DFPTPIFDVVLKGLHIAGSIVGT 151 (166)
T ss_dssp TT---SCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCSS--EEEEEHHHHHHTTCEEEECCSCC
T ss_pred cc---hhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecCC--CccCCHHHHHhCCcEEEEEeecC
Confidence 87 788888887655 5667777777777799999999999 99999996543 3455555554 499999987665
Q ss_pred CCchhhHHHHHHHHHcC
Q 016363 334 LKPRSDIATLAQKYLDK 350 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~ 350 (390)
+++++++++++++|
T Consensus 152 ---~~d~~e~l~l~~~G 165 (166)
T d1llua2 152 ---RADLQEALDFAGEG 165 (166)
T ss_dssp ---HHHHHHHHHHHHTT
T ss_pred ---HHHHHHHHHHHHCc
Confidence 67899999999987
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=1.8e-25 Score=191.00 Aligned_cols=169 Identities=18% Similarity=0.156 Sum_probs=137.0
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+|+++||+++++++|||++|.+..++++||+|||+|+ |++|++++|+|+..|+ +||+++++++|.++++++|+++++|
T Consensus 1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~ 79 (179)
T d1qora2 1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN 79 (179)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence 5899999999999999999988889999999999987 8899999999999999 9999999999999999999999999
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc--ceeEEeee
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GRSVCGTY 330 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~i~g~~ 330 (390)
+++ +++.+.+++++++ ++|+|+|++|++. ++.++++++++ |+++.+|..... ...++...+.. .+.+....
T Consensus 80 ~~~---~d~~~~v~~~t~g~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (179)
T d1qora2 80 YRE---EDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRR-GLMVSFGNSSGA-VTGVNLGILNQKGSLYVTRPS 153 (179)
T ss_dssp TTT---SCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEE-EEEEECCCTTCC-CCCBCTHHHHHTTSCEEECCC
T ss_pred CCC---CCHHHHHHHHhCCCCeEEEEeCccHHH-HHHHHHHHhcC-CeeeecccccCC-ccccchhhhhccceEEEEeeE
Confidence 887 8999999999988 9999999999876 99999999999 999999865433 22333333332 33333222
Q ss_pred cCC-CCch----hhHHHHHHHHHcC
Q 016363 331 FGG-LKPR----SDIATLAQKYLDK 350 (390)
Q Consensus 331 ~~~-~~~~----~~~~~~~~~~~~~ 350 (390)
+.. ...+ +.+.++++++++|
T Consensus 154 l~~~~~~~~~~~~~~~~l~~lv~~G 178 (179)
T d1qora2 154 LQGYITTREELTEASNELFSLIASG 178 (179)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred EeeecCCHHHHHHHHHHHHHHHHCc
Confidence 211 1112 3345677777776
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.92 E-value=3.5e-25 Score=187.54 Aligned_cols=170 Identities=13% Similarity=0.116 Sum_probs=133.3
Q ss_pred CCcchhhccccchhhHHHHHH---HHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 175 IPLGIACLLSCGVSTGVGAAW---KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~---~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|++|||+++++++|||+++. +..+.++|++|||+|+ |++|.+++|+|+.+|+ +||+++++++|.++++++|+++
T Consensus 1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~ 79 (176)
T d1xa0a2 1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE 79 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence 689999999999999997653 4577899999999997 9999999999999999 9999999999999999999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 329 (390)
++++++ .+.+.++...++++|+|||++|+.. ++..+++|+++ |+++.+|...+. ..+++... ++++++++|.
T Consensus 80 vi~~~~----~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~-Griv~~G~~~g~-~~~~~~~~~~~k~~~i~Gv 152 (176)
T d1xa0a2 80 VLARED----VMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVSGLTGGA-EVPTTVHPFILRGVSLLGI 152 (176)
T ss_dssp EEECC-------------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEECSCCSSS-CCCCCSHHHHHTTCEEEEC
T ss_pred eeecch----hHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCC-ceEEEeecccCc-ccCCCHHHHHHCCcEEEEE
Confidence 999865 4444554444449999999999988 99999999999 999999976543 34455444 4559999997
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCC
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNL 354 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (390)
.... ...+...++++.+. ++++|
T Consensus 153 ~~~~-~~~~~~~~~~~~la-g~lkP 175 (176)
T d1xa0a2 153 DSVY-CPMDLRLRIWERLA-GDLKP 175 (176)
T ss_dssp CSSS-CCHHHHHHHHHHHH-TTTCC
T ss_pred eCCc-CCHHHHHHHHHHHh-cccCC
Confidence 5433 23456667777664 65554
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.92 E-value=1.5e-24 Score=183.32 Aligned_cols=167 Identities=25% Similarity=0.419 Sum_probs=144.7
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+|+++||+++++++|||+++ +..++++|++|||+|+|++|++++|+++..|+ +|++++++++|++.++++|++.++++
T Consensus 1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~ 78 (168)
T d1rjwa2 1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence 68999999999999999987 68899999999999999999999999999999 89999999999999999999999998
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 333 (390)
.+ .++.+.+++.+.+. |.+++++++...++.++++++++ |+++.+|.... ..+++...++ +++++.|+..+.
T Consensus 79 ~~---~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~~--~~~~~~~~~~~~~~~i~gs~~~~ 151 (168)
T d1rjwa2 79 LK---EDAAKFMKEKVGGV-HAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPE--EMPIPIFDTVLNGIKIIGSIVGT 151 (168)
T ss_dssp TT---SCHHHHHHHHHSSE-EEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--EEEEEHHHHHHTTCEEEECCSCC
T ss_pred cc---chhhhhcccccCCC-ceEEeecCCHHHHHHHHHHhccC-CceEecccccC--CCCCCHHHHHHCCcEEEEEeeCC
Confidence 88 78889999888754 44556667777799999999999 99999997644 3445554444 499999987554
Q ss_pred CCchhhHHHHHHHHHcCCCC
Q 016363 334 LKPRSDIATLAQKYLDKELN 353 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~ 353 (390)
+++++++++++++|+++
T Consensus 152 ---~~~~~~~l~l~~~Gkik 168 (168)
T d1rjwa2 152 ---RKDLQEALQFAAEGKVK 168 (168)
T ss_dssp ---HHHHHHHHHHHHTTSCC
T ss_pred ---HHHHHHHHHHHHhCCCC
Confidence 68899999999999874
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.92 E-value=7.9e-24 Score=179.15 Aligned_cols=166 Identities=19% Similarity=0.326 Sum_probs=137.1
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+|+++||.+. ++++||+++ ++.++++|++|||+|+|++|++++|+|+.+|+ +||+++++++|+++++++|++..+++
T Consensus 1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~ 77 (170)
T d1e3ja2 1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV 77 (170)
T ss_dssp SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence 5788988774 789999987 78899999999999999999999999999999 99999999999999999999987755
Q ss_pred CCCCCcC---HHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeee
Q 016363 255 ATCGDKT---VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (390)
Q Consensus 255 ~~~~~~~---~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (390)
+. ...+ +.+.+.+..++++|+||||+|++..++.++++++++ |+++.+|.... ..+++...+.. ++++.|++
T Consensus 78 ~~-~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~--~~~~~~~~~~~k~i~i~gs~ 153 (170)
T d1e3ja2 78 DP-AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQ--MVTVPLVNACAREIDIKSVF 153 (170)
T ss_dssp CT-TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSS--CCCCCHHHHHTTTCEEEECC
T ss_pred cc-cccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCC--CCCcCHHHHHHCCCEEEEEE
Confidence 43 1123 334455545559999999999998899999999999 99999996643 34566555554 99999985
Q ss_pred cCCCCchhhHHHHHHHHHcCC
Q 016363 331 FGGLKPRSDIATLAQKYLDKE 351 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~ 351 (390)
.. .++++++++++++||
T Consensus 154 ~~----~~~~~~ai~li~~Gk 170 (170)
T d1e3ja2 154 RY----CNDYPIALEMVASGR 170 (170)
T ss_dssp SC----SSCHHHHHHHHHTTS
T ss_pred CC----HHHHHHHHHHHHcCC
Confidence 33 357899999999985
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=9.1e-25 Score=179.52 Aligned_cols=137 Identities=11% Similarity=0.039 Sum_probs=113.3
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++.+++++ +++.+++.|+|++|||+|||.++|||+.|++...|..+.. ..+|.++|+|++|+|+++|. ..+
T Consensus 1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~-~~~p~v~G~e~~G~V~~~~~--~~~ 77 (146)
T d1o89a1 1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKII-RNFPMIPGIDFAGTVRTSED--PRF 77 (146)
T ss_dssp CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCC-CSSSBCCCSEEEEEEEEECS--TTC
T ss_pred CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccc-cccceeccccccccceeecc--CCc
Confidence 899999999876 7788999999999999999999999999999999976554 27899999999999999877 479
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|+..... .|...+ |+|+||+++|++.++++|+
T Consensus 78 ~~g~~v~~~~~~------------------------~g~~~~-------------------G~~Aey~~v~~~~vv~lP~ 114 (146)
T d1o89a1 78 HAGQEVLLTGWG------------------------VGENHW-------------------GGLAEQARVKGDWLVAMPQ 114 (146)
T ss_dssp CTTCEEEEECTT------------------------BTTTBC-------------------CSSBSEEEECGGGCEECCT
T ss_pred cceeeEEeeccc------------------------ceecCC-------------------CcceeeeeeeeeeEEECCC
Confidence 999999875321 233333 5899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCC
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVE 201 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~ 201 (390)
++|+++||+++++..||+. ....++
T Consensus 115 ~ls~~eAA~l~~a~~tA~~---~~~~~~ 139 (146)
T d1o89a1 115 GQAAKEISLSEAPNFAEAI---INNQIQ 139 (146)
T ss_dssp TSCCEEECGGGHHHHHHHH---HTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHH---HHHhhc
Confidence 9999999999988777754 344555
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=1.7e-26 Score=193.95 Aligned_cols=153 Identities=17% Similarity=0.140 Sum_probs=127.8
Q ss_pred ceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 14 IRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 14 ~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
.+|||+++.++++. +++++++.|++++|||||||+|+|||++|++.+.|..+... ..|.++|+|++|+|++. .++
T Consensus 2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~--~~~ 78 (162)
T d1tt7a1 2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVR-EYPLILGIDAAGTVVSS--NDP 78 (162)
T ss_dssp CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCS-SCSEECCSEEEEEEEEC--SST
T ss_pred CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccc-cceeeeeeecccccccc--ccc
Confidence 58999999988765 99999999999999999999999999999999999876542 67899999999999984 457
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
++++||+|+..... .|...+ |+|+||+++|+++++++
T Consensus 79 ~~~~g~~v~~~~~~------------------------~g~~~~-------------------G~~aey~~v~~~~l~~i 115 (162)
T d1tt7a1 79 RFAEGDEVIATSYE------------------------LGVSRD-------------------GGLSEYASVPGDWLVPL 115 (162)
T ss_dssp TCCTTCEEEEESTT------------------------BTTTBC-------------------CSSBSSEEECGGGEEEC
T ss_pred ccccceeeEeeecc------------------------ceeccc-------------------cccceEEEecHHHEEEC
Confidence 89999999875431 233333 48999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-Ch
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GA 213 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~ 213 (390)
|+++++++||.+++..+|||.++ ...+...+++|||.|+ |.
T Consensus 116 P~~ls~~~Aa~~~~~~~ta~~~~-~~~~~~~~~~Vli~ga~G~ 157 (162)
T d1tt7a1 116 PQNLSLKEAMVDQLLTIVDREVS-LEETPGALKDILQNRIQGR 157 (162)
T ss_dssp CTTCCHHHHHHSCSTTSEEEEEC-STTHHHHHHHTTTTCCSSE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCCCEEEEECCcce
Confidence 99999999999999999999764 2334455677888876 54
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.91 E-value=3.2e-24 Score=183.69 Aligned_cols=164 Identities=23% Similarity=0.215 Sum_probs=137.0
Q ss_pred hccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC
Q 016363 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 259 (390)
++++++++|||+++.+..++++||+|||+|+ |++|++++|+|+..|+ +||++++++++.++++++|+++++++.+
T Consensus 8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~--- 83 (182)
T d1v3va2 8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--- 83 (182)
T ss_dssp TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS---
T ss_pred HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc---
Confidence 4577889999999999999999999999998 9999999999999999 9999999999999999999999999887
Q ss_pred cCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC-----CCcccchHh-hhcceeEEeeecC
Q 016363 260 KTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-----SPISLNSIE-ILKGRSVCGTYFG 332 (390)
Q Consensus 260 ~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~-~~~~~~i~g~~~~ 332 (390)
.++.+.+.+.+.+ |+|+|||++|++. ++.++++++++ |+++.+|..... ....+++.. +.+++++.|+...
T Consensus 84 ~~~~~~~~~~~~~~Gvd~v~D~vG~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~ 161 (182)
T d1v3va2 84 VNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY 161 (182)
T ss_dssp CSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred ccHHHHHHHHhhcCCCceeEEecCchh-hhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence 7777777777766 9999999999765 99999999999 999999964321 122333443 4459999998776
Q ss_pred CCCc---hhhHHHHHHHHHcC
Q 016363 333 GLKP---RSDIATLAQKYLDK 350 (390)
Q Consensus 333 ~~~~---~~~~~~~~~~~~~~ 350 (390)
.+.. .+.++++++++++|
T Consensus 162 ~~~~~~~~~~~~~l~~~i~~G 182 (182)
T d1v3va2 162 RWQGDVREKALRDLMKWVLEG 182 (182)
T ss_dssp GCCHHHHHHHHHHHHHHHHTT
T ss_pred ccChHHHHHHHHHHHHHHhCc
Confidence 6542 34577888888775
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=2.5e-24 Score=181.93 Aligned_cols=165 Identities=16% Similarity=0.249 Sum_probs=135.0
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+.+++.+|.++|+..|+|+++ +.+++++|++|||+|+|++|++++|+|+.+|+ ++|+++++++++++++++|++++++
T Consensus 3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~ 80 (168)
T d1uufa2 3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN 80 (168)
T ss_dssp GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEE
Confidence 346678888999999999998 77999999999999999999999999999999 8889999999999999999999999
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 332 (390)
+.+ .+... ...+++|++||++|++..++.+++.++++ |+++.+|..... ...++...+ .+++++.|+..+
T Consensus 81 ~~~---~~~~~----~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~l~~k~~~i~Gs~~~ 151 (168)
T d1uufa2 81 SRN---ADEMA----AHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATP-HKSPEVFNLIMKRRAIAGSMIG 151 (168)
T ss_dssp TTC---HHHHH----TTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSC
T ss_pred Cch---hhHHH----HhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCC-cccccHHHHHHCCcEEEEEeec
Confidence 876 32211 11238999999999987799999999999 999999975433 334454444 459999999766
Q ss_pred CCCchhhHHHHHHHHHcCCC
Q 016363 333 GLKPRSDIATLAQKYLDKEL 352 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~ 352 (390)
+ .++++++++++.++++
T Consensus 152 ~---~~d~~e~l~l~a~~~I 168 (168)
T d1uufa2 152 G---IPETQEMLDFCAEHGI 168 (168)
T ss_dssp C---HHHHHHHHHHHHHHTC
T ss_pred C---HHHHHHHHHHHHHcCC
Confidence 5 6889999999998764
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=1e-24 Score=184.34 Aligned_cols=165 Identities=21% Similarity=0.239 Sum_probs=137.3
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
+.+.||.+.|+..|||+++ +++++++|++|+|+|+|++|++++|+|+.+|+ +||+++++++|+++++++|+++++++.
T Consensus 2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~ 79 (168)
T d1piwa2 2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL 79 (168)
T ss_dssp CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence 4466889999999999998 67899999999999999999999999999999 999999999999999999999999876
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChH--HHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTS--VMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
+ +.++.+ ...+++|+++||++... .++.++++++++ |+++.+|.......+++.+. +.+++++.|+..++
T Consensus 80 ~--~~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~~~i~Gs~~g~ 151 (168)
T d1piwa2 80 E--EGDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGS 151 (168)
T ss_dssp G--TSCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSCCEEECGG-GCBSCEEEECCCCC
T ss_pred c--hHHHHH----hhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccccccHHHH-HhCCcEEEEEeeCC
Confidence 5 233332 23348999999988654 357889999999 99999997665555554443 45599999997765
Q ss_pred CCchhhHHHHHHHHHcCCCC
Q 016363 334 LKPRSDIATLAQKYLDKELN 353 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~ 353 (390)
+++++++++++++|+++
T Consensus 152 ---~~~~~e~l~li~~gkIk 168 (168)
T d1piwa2 152 ---IKELNQLLKLVSEKDIK 168 (168)
T ss_dssp ---HHHHHHHHHHHHHTTCC
T ss_pred ---HHHHHHHHHHHHhCCCC
Confidence 68999999999999864
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.90 E-value=4e-24 Score=181.06 Aligned_cols=145 Identities=20% Similarity=0.268 Sum_probs=118.8
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+|+++||++++++.|||+++ +.+++++||+|||+|+ |++|++++|+|+.+|+ +||+++++++|++.++++|++++++
T Consensus 1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~ 78 (171)
T d1iz0a2 1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT 78 (171)
T ss_dssp CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence 58999999999999999998 5689999999999997 9999999999999999 9999999999999999999999998
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
+.+ . ..+.+.+ |+|+|||++|. . ++.++++++++ |+++.+|.... ...++++..+ .+++++.|++.
T Consensus 79 ~~~-----~---~~~~~~~~g~D~v~d~~G~-~-~~~~~~~l~~~-G~~v~~G~~~g-~~~~~~~~~~~~k~~~i~g~~~ 146 (171)
T d1iz0a2 79 YAE-----V---PERAKAWGGLDLVLEVRGK-E-VEESLGLLAHG-GRLVYIGAAEG-EVAPIPPLRLMRRNLAVLGFWL 146 (171)
T ss_dssp GGG-----H---HHHHHHTTSEEEEEECSCT-T-HHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCH
T ss_pred hhh-----h---hhhhhccccccccccccch-h-HHHHHHHHhcC-CcEEEEeCCCC-CCCCccHHHHHHCCcEEEEEeC
Confidence 754 2 3344445 99999999884 4 88999999999 99999996542 2334555444 45999999865
Q ss_pred CC
Q 016363 332 GG 333 (390)
Q Consensus 332 ~~ 333 (390)
..
T Consensus 147 ~~ 148 (171)
T d1iz0a2 147 TP 148 (171)
T ss_dssp HH
T ss_pred cC
Confidence 54
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.89 E-value=6.6e-24 Score=182.75 Aligned_cols=173 Identities=18% Similarity=0.195 Sum_probs=137.6
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE-cC-ChHHHHHHHHHHHcCCCeEEEecCChh----hHHHHHhcCC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF-GL-GAVGLAVAEGARLNRASKIIGVDINPE----KFEIGKKFGI 248 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~-Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~----~~~~~~~~g~ 248 (390)
+|+++||+++++++|||++|.+..++++|++|+|+ |+ |++|++++|+||.+|+ +||+++++++ +.+.++++|+
T Consensus 1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa 79 (189)
T d1gu7a2 1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA 79 (189)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence 68999999999999999999888999999999997 66 9999999999999999 9999886654 4556788999
Q ss_pred cEEEcCCCCCCcCHHHHHHhhc---CCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cce
Q 016363 249 TDFINPATCGDKTVSQVIKEMT---DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGR 324 (390)
Q Consensus 249 ~~v~~~~~~~~~~~~~~i~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~ 324 (390)
++++++++.+..++.+.+++.+ ++++|+|||++|++. .+.++++|+++ |+++.+|.... ...+++...+. +++
T Consensus 80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~l~~k~~ 156 (189)
T d1gu7a2 80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN-GLMLTYGGMSF-QPVTIPTSLYIFKNF 156 (189)
T ss_dssp SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT-CEEEECCCCSS-CCEEECHHHHHHSCC
T ss_pred cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCC-cEEEEECCccC-CCccCcHHHHHHCCc
Confidence 9999875422345666666654 348999999999877 89999999999 99999996543 34456655444 599
Q ss_pred eEEeeecCCCC------chhhHHHHHHHHHcCC
Q 016363 325 SVCGTYFGGLK------PRSDIATLAQKYLDKE 351 (390)
Q Consensus 325 ~i~g~~~~~~~------~~~~~~~~~~~~~~~~ 351 (390)
++.|++++.+. ..+.+.++++++++||
T Consensus 157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk 189 (189)
T d1gu7a2 157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK 189 (189)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence 99998654321 1356788888988885
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.89 E-value=7.9e-26 Score=192.57 Aligned_cols=157 Identities=17% Similarity=0.133 Sum_probs=128.0
Q ss_pred ceeeEEEeecCCCC---cE--EEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCC--------CCCCccccccee
Q 016363 14 IRCKAAICRIPGKP---LV--IEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--------LPLPVIFGHEAV 80 (390)
Q Consensus 14 ~t~~a~~~~~~~~~---~~--~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~--------~~~p~~~G~e~~ 80 (390)
.|+||+++.++|+| ++ ..++|.|+|++|||||||++++||++|+++++|..+... ...|.++|+|++
T Consensus 2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~ 81 (175)
T d1gu7a1 2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL 81 (175)
T ss_dssp EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence 58999999999886 44 456677788999999999999999999999988654321 256788999999
Q ss_pred EEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccccccccee
Q 016363 81 GVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160 (390)
Q Consensus 81 G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~ 160 (390)
|+|+++|..+..++.||+|..... ..|+|+||
T Consensus 82 g~V~~~~~~~~~~~~g~~v~~~~~------------------------------------------------~~g~~aey 113 (175)
T d1gu7a1 82 FEVIKVGSNVSSLEAGDWVIPSHV------------------------------------------------NFGTWRTH 113 (175)
T ss_dssp EEEEEECTTCCSCCTTCEEEESSS------------------------------------------------CCCCSBSE
T ss_pred cccccccccccccccccceecccc------------------------------------------------ccccccce
Confidence 999999999999999999975322 11489999
Q ss_pred EEeeCCceEEcCCCCCcchhhccccchhhHHHHHHH-HhCCCCCCEEEEEc-C-ChHHHHHHH
Q 016363 161 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK-VAGVEVGSTVAIFG-L-GAVGLAVAE 220 (390)
Q Consensus 161 ~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~-~~~~~~g~~VlI~G-a-g~vG~~ai~ 220 (390)
+++++++++++|++++.+.+ +++...|||+++.. ..++++|++|||.| + |++|++++|
T Consensus 114 ~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 114 ALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174 (175)
T ss_dssp EEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred eeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence 99999999999998764444 34567788887643 46799999999997 4 679998776
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=5.2e-23 Score=176.71 Aligned_cols=172 Identities=18% Similarity=0.229 Sum_probs=132.4
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHH-HHhcCCc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGIT 249 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~~g~~ 249 (390)
++|+...| ++++.+|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|+++|++++.++++... .+++|++
T Consensus 1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad 79 (187)
T d1vj1a2 1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD 79 (187)
T ss_dssp CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence 35556643 677899999999999999988 88999997 9999999999999999778877777766554 4679999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC-CCc----ccc---hH-hh
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-SPI----SLN---SI-EI 320 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~----~~~---~~-~~ 320 (390)
+++|+.+ +++.+.+++.++.|+|+|||++|++. ++..+++++++ |+++.+|..... ... +.. .. .+
T Consensus 80 ~vi~~~~---~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~ 154 (187)
T d1vj1a2 80 AAVNYKT---GNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRK 154 (187)
T ss_dssp EEEETTS---SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHH
T ss_pred EEeeccc---hhHHHHHHHHhccCceEEEecCCchh-HHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHH
Confidence 9999988 89999999998779999999999876 99999999999 999999964321 011 111 11 23
Q ss_pred hcceeEEeeecCCCCc--hhhHHHHHHHHHcCC
Q 016363 321 LKGRSVCGTYFGGLKP--RSDIATLAQKYLDKE 351 (390)
Q Consensus 321 ~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~ 351 (390)
.+++++.|+.+..+.. .+.++++.+++++||
T Consensus 155 ~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk 187 (187)
T d1vj1a2 155 ERNITRERFTVLNYKDKFEPGILQLSQWFKEGK 187 (187)
T ss_dssp HTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred hcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence 3478888876655432 356788888888885
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.88 E-value=8.1e-22 Score=169.96 Aligned_cols=166 Identities=27% Similarity=0.256 Sum_probs=137.3
Q ss_pred chhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCC
Q 016363 178 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 257 (390)
Q Consensus 178 ~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~ 257 (390)
++.+.++.++.|||+++ +.+++++|++|||+|+|++|++++++|+.+|+.+|++++.+++|++.++++|+++++++.+
T Consensus 2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~- 79 (195)
T d1kola2 2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD- 79 (195)
T ss_dssp HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence 46778888999999997 7899999999999999999999999999999989999999999999999999999999877
Q ss_pred CCcCHHHHHHhhcCC-CccEEEEcccCh---------------HHHHHHHHHhccCCceEEEEcccCCCCCc--------
Q 016363 258 GDKTVSQVIKEMTDG-GADYCFECIGLT---------------SVMNDAFNSSREGWGKTVILGVEMHGSPI-------- 313 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~-g~D~vid~~g~~---------------~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-------- 313 (390)
.++.+.+.+++++ ++|++||++|.+ ..++.+++.++++ |+++.+|........
T Consensus 80 --~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~ 156 (195)
T d1kola2 80 --TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKI 156 (195)
T ss_dssp --SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHT
T ss_pred --cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhc
Confidence 7999999999988 999999999943 4699999999999 999999975543222
Q ss_pred ---ccchHh-hhcceeEEeeecCCCCchhhHHHHHHHHHcCC
Q 016363 314 ---SLNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 351 (390)
Q Consensus 314 ---~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 351 (390)
+++... +.+++++.+. ....++.++++++++.++|
T Consensus 157 ~~~~~~~~~~~~k~~~i~~g---~~~v~~~~~~Ll~~I~~~k 195 (195)
T d1kola2 157 GSLSIRFGLGWAKSHSFHTG---QTPVMKYNRALMQAIMWDR 195 (195)
T ss_dssp TCCCCCHHHHHHTTCEEEES---SCCHHHHHHHHHHHHHTTS
T ss_pred CceeeeHHHHHhhcceeccC---CCchHHHHHHHHHHHHcCC
Confidence 222222 3346766542 3333566788888888764
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=1e-21 Score=166.33 Aligned_cols=149 Identities=13% Similarity=0.104 Sum_probs=120.5
Q ss_pred CCcchhhccccchhhHHHHHH--HHhC-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 175 IPLGIACLLSCGVSTGVGAAW--KVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~--~~~~-~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+.+||.++++.+|||++++ ...+ .+++++|||+|+ |++|++++|+|+.+|+ +||+++++++|.+.++++|+++
T Consensus 1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~ 79 (177)
T d1o89a2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR 79 (177)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence 578999999999999998764 2334 445679999988 9999999999999999 9999999999999999999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 329 (390)
++++++ .++.+ .+.+...|.++|++|+.. +...+++++++ |+++.+|..... ..+++... +.+++++.|+
T Consensus 80 vi~~~~---~~~~~---~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~-Griv~~G~~~~~-~~~~~~~~~~~k~~~i~G~ 150 (177)
T d1o89a2 80 VLPRDE---FAESR---PLEKQVWAGAIDTVGDKV-LAKVLAQMNYG-GCVAACGLAGGF-TLPTTVMPFILRNVRLQGV 150 (177)
T ss_dssp EEEGGG---SSSCC---SSCCCCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTCS-CCCCCSHHHHHHCCEEEEC
T ss_pred cccccc---HHHHH---HHHhhcCCeeEEEcchHH-HHHHHHHhccc-cceEeecccCCc-cccccHHHHHHCCCeEEEE
Confidence 999876 34332 223347899999999887 99999999999 999999965533 34444444 4559999998
Q ss_pred ecCC
Q 016363 330 YFGG 333 (390)
Q Consensus 330 ~~~~ 333 (390)
+...
T Consensus 151 ~~~~ 154 (177)
T d1o89a2 151 DSVM 154 (177)
T ss_dssp CSSS
T ss_pred eccc
Confidence 6543
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.82 E-value=4.4e-21 Score=160.83 Aligned_cols=154 Identities=16% Similarity=0.139 Sum_probs=116.6
Q ss_pred chhhHHHH---HHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcC
Q 016363 186 GVSTGVGA---AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 261 (390)
Q Consensus 186 ~~~tA~~~---l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 261 (390)
+..|||.+ |.+....+++++|||+|+ |++|.+++|+|+.+|+ +||+++++++|.++++++|+++++++++ .
T Consensus 4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~----~ 78 (167)
T d1tt7a2 4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED----V 78 (167)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH----H
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc----h
Confidence 45667654 444556778889999997 9999999999999999 9999999999999999999999998654 1
Q ss_pred HHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeecCCCCchhhH
Q 016363 262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDI 340 (390)
Q Consensus 262 ~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~ 340 (390)
..+.+....++++|+|||++|++. ++.++++|+++ |+++.+|..... ..+++... ++++++++|...... ..+..
T Consensus 79 ~~~~~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~-G~iv~~G~~~g~-~~~~~~~~l~~k~~~i~G~~~~~~-~~~~~ 154 (167)
T d1tt7a2 79 YDGTLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYG-GSVAVSGLTGGG-EVPATVYPFILRGVSLLGIDSVYC-PMDVR 154 (167)
T ss_dssp CSSCCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEE-EEEEECCCSSCS-CEEECSHHHHTSCCEEEECCSSSC-CHHHH
T ss_pred hchhhhcccCCCceEEEecCcHHH-HHHHHHHhccC-ceEEEeeccCCC-cccCCHHHHHHCCcEEEEEecCCC-CHHHH
Confidence 112222223349999999999988 99999999999 999999976643 44555444 455999999754432 23445
Q ss_pred HHHHHHHH
Q 016363 341 ATLAQKYL 348 (390)
Q Consensus 341 ~~~~~~~~ 348 (390)
.++++.+.
T Consensus 155 ~~~~~~l~ 162 (167)
T d1tt7a2 155 AAVWERMS 162 (167)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 55555553
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.63 E-value=3.8e-15 Score=121.01 Aligned_cols=132 Identities=17% Similarity=0.128 Sum_probs=98.7
Q ss_pred eeeEEEeecC--CCC----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 15 RCKAAICRIP--GKP----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 15 t~~a~~~~~~--~~~----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
..|++++.+. |.| |++++.++|+|++||||||+++.++++........ . ....++..+++|+|++ |
T Consensus 3 ~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~----~--~~g~~~~g~~vg~Vv~--S 74 (147)
T d1v3va1 3 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR----L--KEGAVMMGQQVARVVE--S 74 (147)
T ss_dssp EEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG----S--CTTSBCCCCEEEEEEE--E
T ss_pred ccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc----c--ccCCccccceEEEEEE--e
Confidence 4677787764 433 99999999999999999999999998865443322 1 2333566789999988 5
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
++++|++||+|++. ++|+||.+++.+.+
T Consensus 75 ~~~~f~~GD~V~g~----------------------------------------------------~gw~ey~v~~~~~l 102 (147)
T d1v3va1 75 KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGL 102 (147)
T ss_dssp SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEECSSSC
T ss_pred CCCcccCCCEEEEc----------------------------------------------------cCCEeEEEecccee
Confidence 66889999999863 37999999999999
Q ss_pred EEcCCCCCc-----chhhccccchhhHHH-HHHHHhCCCCCCEEEE
Q 016363 169 VKITPHIPL-----GIACLLSCGVSTGVG-AAWKVAGVEVGSTVAI 208 (390)
Q Consensus 169 ~~~p~~~~~-----~~aa~~~~~~~tA~~-~l~~~~~~~~g~~VlI 208 (390)
.++|++++. ...+++....+|||+ .+ ....+.|++||+
T Consensus 103 ~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl--~~~~k~Getvv~ 146 (147)
T d1v3va1 103 EKLLTEWPDKKIQYHEHVTKGFENMPAAFIEM--LNGANLGKAVVT 146 (147)
T ss_dssp EECCTTCCTTSSCCCEEEEECGGGHHHHHHHH--HTTCCSSEEEEE
T ss_pred eEccccccccccchhhhHhccccchHHHHHHh--hCCCCCCCEEEe
Confidence 999876533 234456666677544 44 445677999987
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.47 E-value=1.8e-14 Score=102.71 Aligned_cols=73 Identities=14% Similarity=0.105 Sum_probs=66.3
Q ss_pred CCcchhhccccchhhHHHHHH---HHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC
Q 016363 175 IPLGIACLLSCGVSTGVGAAW---KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~---~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~ 248 (390)
+|+++|+.++++..|||.+++ +...++++++|||+|+ |++|.+++|+++.+|+ +|+++++++++.++++++|+
T Consensus 1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA 77 (77)
T d1o8ca2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA 77 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence 588999999999999998764 3456789999999988 9999999999999999 99999999999999999884
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.00 E-value=2.3e-05 Score=63.89 Aligned_cols=106 Identities=18% Similarity=0.231 Sum_probs=75.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC----CCCC-------------CcCHHH
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP----ATCG-------------DKTVSQ 264 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~----~~~~-------------~~~~~~ 264 (390)
+..+|+|+|+|.+|+.|+..|+.+|+ +|.+.+.++++++.+++++...+... .... .....+
T Consensus 28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 35689999999999999999999999 99999999999999999876443110 0000 001122
Q ss_pred HHHhhcCCCccEEEEcccChH------HHHHHHHHhccCCceEEEEcccCCC
Q 016363 265 VIKEMTDGGADYCFECIGLTS------VMNDAFNSSREGWGKTVILGVEMHG 310 (390)
Q Consensus 265 ~i~~~~~~g~D~vid~~g~~~------~~~~~~~~l~~~~G~~v~~g~~~~~ 310 (390)
.+.+... ..|+||-++--+. ..+..++.|+++ ..++++....+.
T Consensus 107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidqGG 156 (183)
T d1l7da1 107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGG 156 (183)
T ss_dssp HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTC
T ss_pred HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecCCC
Confidence 2332222 6999998664322 247899999999 999999875543
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=97.95 E-value=2e-05 Score=63.38 Aligned_cols=98 Identities=20% Similarity=0.209 Sum_probs=74.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc--EEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
+..+|+|+|+|.+|+.|++.|+.+|+ .|.+++.++++++.++..... .....++ ..+.+.+. .+|+||.
T Consensus 31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~-----~aDivI~ 101 (168)
T d1pjca1 31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA-----EADLLIG 101 (168)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH-----TCSEEEE
T ss_pred CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh---hhHHHhhc-----cCcEEEE
Confidence 45789999999999999999999999 999999999999998874322 2222222 34444443 5899998
Q ss_pred cccChH------HHHHHHHHhccCCceEEEEcccCC
Q 016363 280 CIGLTS------VMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 280 ~~g~~~------~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
++--+. ..+..++.|+++ ..++++....+
T Consensus 102 aalipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqG 136 (168)
T d1pjca1 102 AVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQG 136 (168)
T ss_dssp CCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTC
T ss_pred eeecCCcccCeeecHHHHhhcCCC-cEEEEeecCCC
Confidence 765322 247889999999 99999986554
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.79 E-value=4.6e-05 Score=66.24 Aligned_cols=104 Identities=15% Similarity=0.178 Sum_probs=71.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++....+.-+-.+..++.+.+.+... +++|++
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil 83 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 83 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899999998 9999999999999999 99999999998887765 43322222221112233333333322 379999
Q ss_pred EEcccChH--------------------------HHHHHHHHhccCCceEEEEcc
Q 016363 278 FECIGLTS--------------------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 278 id~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+++.|... ..+.+++.|++.+|+++.++.
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS 138 (250)
T d1ydea1 84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS 138 (250)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccc
Confidence 99988421 245566677664489998885
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.79 E-value=7.8e-05 Score=64.85 Aligned_cols=106 Identities=16% Similarity=0.140 Sum_probs=73.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEEEcCCCCC-CcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCG-DKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~-~~~~~~~i~~~~~--~g~D~ 276 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.......-+.. ..+..+.+.+... +++|+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 6889999998 9999999999999999 999999999887665 456655433222211 1223333333222 37999
Q ss_pred EEEcccChH-------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 277 CFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 277 vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
++++.|... ..+.+++.|+..+|+|+.++...
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~ 140 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS 140 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence 999998522 24566677776559999998543
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.77 E-value=8.5e-05 Score=64.41 Aligned_cols=106 Identities=20% Similarity=0.235 Sum_probs=74.5
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+- |-.+ ..+..+.+.+... +++|
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~iD 78 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLED--ERERVRFVEEAAYALGRVD 78 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTC--HHHHHHHHHHHHHHHSCCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhcCCCC
Confidence 347899999998 9999999999999999 999999999988888887765432 2222 2223333333322 3799
Q ss_pred EEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 276 YCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 276 ~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
++++++|... ..+.+++.|++ ++|+|+.++...
T Consensus 79 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~ 137 (248)
T d2d1ya1 79 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ 137 (248)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred eEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence 9999988521 24455666654 238999888543
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.67 E-value=0.00013 Score=59.13 Aligned_cols=75 Identities=16% Similarity=0.127 Sum_probs=58.3
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
+.+..++.++.+|||+|+|+.+.+++..++..|+++|.++.|++++.+.+.+ ++... ++... ..
T Consensus 8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~--------------~~ 72 (167)
T d1npya1 8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE--------------NQ 72 (167)
T ss_dssp HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT--------------TC
T ss_pred HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc--------------cc
Confidence 3366777788999999999999999999999998899999999998877754 44432 32211 12
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|+||+|++-
T Consensus 73 ~~DliINaTpi 83 (167)
T d1npya1 73 QADILVNVTSI 83 (167)
T ss_dssp CCSEEEECSST
T ss_pred chhhheecccc
Confidence 68999999873
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.58 E-value=0.00012 Score=63.23 Aligned_cols=102 Identities=19% Similarity=0.335 Sum_probs=69.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcE---EEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD---FINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~---v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++... ..|-.+ ..+..+.+.+... +++
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i 79 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD--PASIESVLEKIRAEFGEV 79 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC--HHHhhhhhhhhhcccCCc
Confidence 5889999998 9999999999999999 9999999998877664 355332 122222 2233333333322 379
Q ss_pred cEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcc
Q 016363 275 DYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV 306 (390)
Q Consensus 275 D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~ 306 (390)
|+++++.|... ..+.+++.|.+ ++|+|+.++.
T Consensus 80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS 137 (243)
T d1q7ba_ 80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS 137 (243)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecc
Confidence 99999987522 24556666643 2399999985
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.55 E-value=0.00024 Score=56.95 Aligned_cols=81 Identities=15% Similarity=0.174 Sum_probs=61.6
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHH-HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
..+..+--.+.+|||+|+|.+|.+.++.+...|+++++++.|+.+|.+ ++++++. .++.++ ++.+.+.
T Consensus 15 a~~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-~~~~~~-----~~~~~l~----- 83 (159)
T d1gpja2 15 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-EAVRFD-----ELVDHLA----- 83 (159)
T ss_dssp HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-EECCGG-----GHHHHHH-----
T ss_pred HHHHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-ccccch-----hHHHHhc-----
Confidence 345555568899999999999999999999999978999999988865 5566774 333332 3555443
Q ss_pred CccEEEEcccChH
Q 016363 273 GADYCFECIGLTS 285 (390)
Q Consensus 273 g~D~vid~~g~~~ 285 (390)
.+|+||.|++.+.
T Consensus 84 ~~Divi~atss~~ 96 (159)
T d1gpja2 84 RSDVVVSATAAPH 96 (159)
T ss_dssp TCSEEEECCSSSS
T ss_pred cCCEEEEecCCCC
Confidence 5999999998754
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.48 E-value=0.00041 Score=59.75 Aligned_cols=107 Identities=17% Similarity=0.173 Sum_probs=70.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ +..|.+.. +..+-.+..+..+.++... .++
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~ 84 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 84 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 5899999998 9999999998899999 999999999987655 33554422 2222111222333333332 237
Q ss_pred ccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccCC
Q 016363 274 ADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEMH 309 (390)
Q Consensus 274 ~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~~ 309 (390)
+|+++++.|... ..+.++..|.. ++|+|+.++....
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~ 146 (244)
T d1yb1a_ 85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG 146 (244)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence 999999999632 23445555644 3388998886543
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.46 E-value=0.00043 Score=59.88 Aligned_cols=102 Identities=19% Similarity=0.348 Sum_probs=69.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-----HhcCCcEE-E--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----KKFGITDF-I--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-----~~~g~~~v-~--~~~~~~~~~~~~~i~~~~~- 271 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+.. + |-.+ ..++.+.+.+...
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKEK 80 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 5889999998 9999999999999999 999999998876533 33565432 2 2222 2233333333322
Q ss_pred -CCccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcc
Q 016363 272 -GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV 306 (390)
Q Consensus 272 -~g~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~ 306 (390)
+++|++++++|... ..+.+++.|++ ++|+++.++.
T Consensus 81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S 142 (251)
T d1vl8a_ 81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 142 (251)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence 37999999988522 24556677754 2389998875
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.46 E-value=0.00049 Score=56.82 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=56.1
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCC-cEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGI-TDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~-~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
--+|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ ... ....+..+ .+.+.+.. +
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~-~ 91 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD------DASRAEAV-K 91 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS------HHHHHHHT-T
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc------HHHHHHHh-c
Confidence 458999999998 9999999999999999 99999999998766643 222 22333332 23444443 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 92 ~iDilin~Ag~ 102 (191)
T d1luaa1 92 GAHFVFTAGAI 102 (191)
T ss_dssp TCSEEEECCCT
T ss_pred CcCeeeecCcc
Confidence 79999999874
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.45 E-value=0.0008 Score=58.37 Aligned_cols=106 Identities=12% Similarity=0.102 Sum_probs=68.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCC-CCcCHHHHHHhh---cCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATC-GDKTVSQVIKEM---TDG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~-~~~~~~~~i~~~---~~~ 272 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ..+.......-|. +..+..+.+.+. .++
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~ 85 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 85 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 6899999998 9999999999999999 9999999998876543 3444332211111 112233333322 233
Q ss_pred CccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 273 GADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 273 g~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
++|+++++.|... ..+.++..+.. .+|+|+.++...
T Consensus 86 ~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~ 147 (259)
T d2ae2a_ 86 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVS 147 (259)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGG
T ss_pred CceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccc
Confidence 6999999988522 13445555543 338999988543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.44 E-value=0.00025 Score=62.10 Aligned_cols=107 Identities=15% Similarity=0.083 Sum_probs=68.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCcEEEcCCCCCCcCHHHHHHh-hc--C
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITDFINPATCGDKTVSQVIKE-MT--D 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~~v~~~~~~~~~~~~~~i~~-~~--~ 271 (390)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ .+........+..+....+.+.+ .. .
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 46899999998 9999999999999999 99999999998876632 23322221111011222222222 11 2
Q ss_pred CCccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 272 GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 272 ~g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+..|+++.+.|... ..+.++..|+..+|+++.++...
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~ 152 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLA 152 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccch
Confidence 37899988776522 23445556655448988887544
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.41 E-value=0.0022 Score=55.00 Aligned_cols=104 Identities=19% Similarity=0.269 Sum_probs=68.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--HHHHHhcCCcEEE---cCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITDFI---NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~~g~~~v~---~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+.++++|..... |-.+ ..++.+.+.+... ++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~G~ 80 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFGR 80 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC--HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 99999987643 3344567754332 2222 2233333333322 37
Q ss_pred ccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 274 ADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 274 ~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
+|+++++.|... ..+.+++.|++ ++|+++.++...
T Consensus 81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~ 141 (247)
T d2ew8a1 81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT 141 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccch
Confidence 999999988522 23445555543 238999888543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.40 E-value=0.00022 Score=61.42 Aligned_cols=79 Identities=20% Similarity=0.252 Sum_probs=57.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEE-cCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFI-NPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~-~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++...+. |-.+ ..++.+.+.+... +++|+
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iDi 80 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG 80 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC--HHHHHHHHHHHHHhcCCceE
Confidence 5889999998 9999999999999999 99999999998876644 5554332 2222 2233333333322 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 81 lVnnAG~ 87 (242)
T d1ulsa_ 81 VVHYAGI 87 (242)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999885
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.40 E-value=0.00043 Score=59.94 Aligned_cols=106 Identities=19% Similarity=0.224 Sum_probs=69.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.... +..+-.+..++.+.+.+... +++|+
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence 6899999998 9999999999999999 999999999887665 44654322 21111012233333333322 37999
Q ss_pred EEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 277 CFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 277 vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
++++.|... ..+.+++.|.. ++|+|+.++...
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~ 140 (254)
T d1hdca_ 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA 140 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccch
Confidence 999988522 23444454443 239999998543
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.40 E-value=0.00054 Score=59.51 Aligned_cols=81 Identities=22% Similarity=0.318 Sum_probs=55.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEE-cCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFI-NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~-~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.|.+... .-+-.++.++.+.+.+... ++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 82 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999998 9999999999999999 9999999998876553 34544322 1111012233333333322 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 83 iDilVnnaG~ 92 (260)
T d1zema1 83 IDFLFNNAGY 92 (260)
T ss_dssp CCEEEECCCC
T ss_pred CCeehhhhcc
Confidence 9999998874
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.38 E-value=8.7e-05 Score=62.73 Aligned_cols=111 Identities=16% Similarity=0.217 Sum_probs=74.8
Q ss_pred cccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEEcCCCCC
Q 016363 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCG 258 (390)
Q Consensus 183 ~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~~~~~~~ 258 (390)
+..+...|. +.+.+++++|++||.+|+| .|..++.+++..|. +|++++..++-.+.+ +++|.+.+.....
T Consensus 61 is~P~~~a~--ml~~L~l~~g~~VLeIGsG-sGY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g-- 134 (215)
T d1jg1a_ 61 VSAPHMVAI--MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG-- 134 (215)
T ss_dssp ECCHHHHHH--HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--
T ss_pred hhhhhhHHH--HHHhhccCccceEEEecCC-CChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC--
Confidence 333444444 3488899999999999985 47777888887786 899999987755544 4567554332221
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+..+.. ...+.||.|+-+.+-.......++.|+++ |+++..
T Consensus 135 --d~~~g~--~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p 175 (215)
T d1jg1a_ 135 --DGSKGF--PPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP 175 (215)
T ss_dssp --CGGGCC--GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred --ccccCC--cccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence 111111 11237999997766655467889999999 998763
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.35 E-value=0.00084 Score=58.25 Aligned_cols=104 Identities=17% Similarity=0.141 Sum_probs=66.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEE---EcCCCCCCcCHHHHH---Hhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF---INPATCGDKTVSQVI---KEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v---~~~~~~~~~~~~~~i---~~~~ 270 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ..+.... .|-.+ ..+..+.+ .+..
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~ 83 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF 83 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC--HHHHHHHHHHHHHHh
Confidence 5899999998 9999999999999999 9999999998876553 2333322 12222 12222223 2333
Q ss_pred CCCccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 271 DGGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 271 ~~g~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
++.+|+++++.|... ..+.++..|+. ++|+|+.++...
T Consensus 84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~ 147 (259)
T d1xq1a_ 84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA 147 (259)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---
T ss_pred CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccc
Confidence 457999999988632 13444555543 338999887543
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=97.33 E-value=0.00055 Score=59.16 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=68.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC--Cc-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG--IT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g--~~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++ .. ..+..+-.+..+..+.+.+... |++
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 5899999998 9999999999999999 99999999988776643 32 12 2222111111222233332222 379
Q ss_pred cEEEEcccChH-------------------------HHHHHHHHhccCC--ceEEEEccc
Q 016363 275 DYCFECIGLTS-------------------------VMNDAFNSSREGW--GKTVILGVE 307 (390)
Q Consensus 275 D~vid~~g~~~-------------------------~~~~~~~~l~~~~--G~~v~~g~~ 307 (390)
|+++++.|... ..+.++..|.+.+ |+++.++..
T Consensus 84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~ 143 (251)
T d1zk4a1 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecc
Confidence 99999988632 2445566665532 588888753
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.00042 Score=59.66 Aligned_cols=75 Identities=9% Similarity=0.133 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEE--cCCCCCCcCHHHHHHhhcCC--Ccc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI--NPATCGDKTVSQVIKEMTDG--GAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~--~~~~~~~~~~~~~i~~~~~~--g~D 275 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++....+ |-.+ . +.++++... ++|
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d---~---~~v~~~~~~~g~iD 78 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD---W---EATERALGSVGPVD 78 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---H---HHHHHHHTTCCCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---H---HHHHHHHHHhCCce
Confidence 7899999998 9999999999999999 9999999999877664 44433322 3222 2 233333333 799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++++.|.
T Consensus 79 ilVnnAg~ 86 (244)
T d1pr9a_ 79 LLVNNAAV 86 (244)
T ss_dssp EEEECCCC
T ss_pred EEEecccc
Confidence 99998885
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.32 E-value=0.00043 Score=59.50 Aligned_cols=77 Identities=14% Similarity=0.143 Sum_probs=55.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCC--CccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDG--GADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~v 277 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++....+.-+- .+. +.+++.... ++|++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv-~~~---~~v~~~~~~~g~iDil 78 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDL-GDW---DATEKALGGIGPVDLL 78 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT-TCH---HHHHHHHTTCCCCSEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeC-CCH---HHHHHHHHHcCCCeEE
Confidence 5899999998 9999999999999999 9999999998876664 443322222211 112 234444333 79999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
+++.|.
T Consensus 79 VnnAg~ 84 (242)
T d1cyda_ 79 VNNAAL 84 (242)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999885
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.00061 Score=59.06 Aligned_cols=80 Identities=20% Similarity=0.327 Sum_probs=55.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCC-cEEE----cCCCCCCcCHHHHHHhhc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-TDFI----NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~-~~v~----~~~~~~~~~~~~~i~~~~ 270 (390)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ..+. ..++ |-.+ +.+..+.+.+..
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~--~~~v~~~v~~~~ 84 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIR 84 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC--HHHHHHHHHHHH
Confidence 36889999998 9999999999999999 9999999998876653 3332 2222 2222 233333333332
Q ss_pred C--CCccEEEEcccC
Q 016363 271 D--GGADYCFECIGL 283 (390)
Q Consensus 271 ~--~g~D~vid~~g~ 283 (390)
. +++|+++++.|.
T Consensus 85 ~~~g~iD~lVnnAg~ 99 (257)
T d1xg5a_ 85 SQHSGVDICINNAGL 99 (257)
T ss_dssp HHHCCCSEEEECCCC
T ss_pred HhcCCCCEEEecccc
Confidence 2 379999999886
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.30 E-value=0.00018 Score=60.75 Aligned_cols=102 Identities=23% Similarity=0.318 Sum_probs=70.8
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHh
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
+.+.+++++|++||-+|+|. |..++.+|+..|. .+|++++.+++..+.+++ .+.+.+..... +..+.+
T Consensus 67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~----d~~~~~-- 139 (213)
T d1dl5a1 67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG----DGYYGV-- 139 (213)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----CGGGCC--
T ss_pred HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC----chHHcc--
Confidence 34788999999999999875 8888889988763 289999999988776654 34332221111 111110
Q ss_pred hcCCCccEEEEcccChHHHHHHHHHhccCCceEEE
Q 016363 269 MTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~ 303 (390)
...+.||+|+...+-....+.+++.|+++ |+++.
T Consensus 140 ~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~ 173 (213)
T d1dl5a1 140 PEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV 173 (213)
T ss_dssp GGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEE
T ss_pred ccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEE
Confidence 11237999998776555457788999999 99876
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.27 E-value=0.0007 Score=58.72 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=56.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEE---cCCCCCCcCH---HHHHHhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFI---NPATCGDKTV---SQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~---~~~~~~~~~~---~~~i~~~~ 270 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.+..... |-.+ ..++ .+.+.+..
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~--~~~~~~~~~~~~~~~ 81 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF 81 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC--HHHHHHHHHHHHHHh
Confidence 6899999998 9999999999999999 999999999876644 344544322 2222 1222 23333444
Q ss_pred CCCccEEEEcccC
Q 016363 271 DGGADYCFECIGL 283 (390)
Q Consensus 271 ~~g~D~vid~~g~ 283 (390)
++..|+++++.|.
T Consensus 82 ~g~idilinnag~ 94 (258)
T d1ae1a_ 82 DGKLNILVNNAGV 94 (258)
T ss_dssp TSCCCEEEECCCC
T ss_pred CCCcEEEeccccc
Confidence 4579999998886
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.24 E-value=0.0021 Score=47.96 Aligned_cols=93 Identities=9% Similarity=-0.013 Sum_probs=63.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh--HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.|.+|||+|+|.+|..-++.+...|+ +|++++..... ..++.. +.-..+. ..+.+.++ .++++|+-
T Consensus 11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~-~~i~~~~-~~~~~~dl---------~~~~lv~~ 78 (113)
T d1pjqa1 11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANE-GMLTLVE-GPFDETLL---------DSCWLAIA 78 (113)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTT-TSCEEEE-SSCCGGGG---------TTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhc-CCceeec-cCCCHHHh---------CCCcEEee
Confidence 47899999999999999999999999 88877654432 233332 2222222 11111221 26899999
Q ss_pred cccChHHHHHHHHHhccCCceEEEEccc
Q 016363 280 CIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+++....-.......++. |..+.+...
T Consensus 79 at~d~~~n~~i~~~a~~~-~ilVNv~D~ 105 (113)
T d1pjqa1 79 ATDDDTVNQRVSDAAESR-RIFCNVVDA 105 (113)
T ss_dssp CCSCHHHHHHHHHHHHHT-TCEEEETTC
T ss_pred cCCCHHHHHHHHHHHHHc-CCEEEeCCC
Confidence 999888345666777777 888887643
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=0.001 Score=57.49 Aligned_cols=104 Identities=20% Similarity=0.201 Sum_probs=68.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CC-cEE-E--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GI-TDF-I--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~-~~v-~--~~~~~~~~~~~~~i~~~~~ 271 (390)
.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ + +. ... + |-.+ ..++.+.+.+...
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~ 78 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD 78 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC--HHHHHHHHHHHHH
Confidence 4889999998 9999999999999999 99999999988765532 2 21 211 1 2222 2233333333332
Q ss_pred --CCccEEEEcccChH-----------------HHHHHHHHhccC----CceEEEEcccC
Q 016363 272 --GGADYCFECIGLTS-----------------VMNDAFNSSREG----WGKTVILGVEM 308 (390)
Q Consensus 272 --~g~D~vid~~g~~~-----------------~~~~~~~~l~~~----~G~~v~~g~~~ 308 (390)
+++|+++++.|... ....++..|.+. +|+|+.++...
T Consensus 79 ~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~ 138 (254)
T d2gdza1 79 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA 138 (254)
T ss_dssp HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred HcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence 37999999998632 133445555431 27899888543
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.22 E-value=0.0013 Score=53.01 Aligned_cols=80 Identities=10% Similarity=0.031 Sum_probs=56.5
Q ss_pred HHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC---CcEEEcCCCCCCcCHHHHHHh
Q 016363 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG---ITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 193 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g---~~~v~~~~~~~~~~~~~~i~~ 268 (390)
+|.+..-..+|++|||+|+|+.+.+++..+..+|+ +|+.+.|+.+|.+.+.+ +. ....+..++
T Consensus 8 ~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~------------ 74 (170)
T d1nyta1 8 DLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE------------ 74 (170)
T ss_dssp HHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG------------
T ss_pred HHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc------------
Confidence 34333334678999999999999999999999999 89999999998776644 32 222222211
Q ss_pred hcCCCccEEEEcccChH
Q 016363 269 MTDGGADYCFECIGLTS 285 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~ 285 (390)
.....+|++|+|++...
T Consensus 75 ~~~~~~dliIN~Tp~G~ 91 (170)
T d1nyta1 75 LEGHEFDLIINATSSGI 91 (170)
T ss_dssp GTTCCCSEEEECCSCGG
T ss_pred ccccccceeecccccCc
Confidence 11237999999987654
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.19 E-value=0.0012 Score=56.45 Aligned_cols=105 Identities=21% Similarity=0.228 Sum_probs=70.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEEEcCCCC-CCcCHHHHHHhhcC--CCcc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATC-GDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v~~~~~~-~~~~~~~~i~~~~~--~g~D 275 (390)
-.|+++||+|+ +++|.+.++-+...|+ +|+.++++.++.+.+ ++++.+.....-|. +..++.+.+.+... +++|
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD 81 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH 81 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 46899999998 9999999999999999 999999999887655 45675433211111 12233333333332 3799
Q ss_pred EEEEcccChH-------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 276 YCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 276 ~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+.+++.|... ..+..+..+... +.++.++..
T Consensus 82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~ 137 (241)
T d2a4ka1 82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSV 137 (241)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCC
T ss_pred Eeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeecccc
Confidence 9999887532 234556677776 777666543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.19 E-value=0.00094 Score=57.62 Aligned_cols=104 Identities=13% Similarity=0.207 Sum_probs=67.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEE-cCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFI-NPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~-~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+... ..+-.+..++.+.+.+.. -++
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 87 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 87 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4788999998 9999999999989999 999999998887654 335544322 111111223333333322 238
Q ss_pred ccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcc
Q 016363 274 ADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV 306 (390)
Q Consensus 274 ~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~ 306 (390)
+|+++++.|... ..+.++..|.. ++|+||.++.
T Consensus 88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS 146 (251)
T d2c07a1 88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISS 146 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECC
Confidence 999999888522 23444555532 3399999984
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.18 E-value=0.00043 Score=59.59 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=70.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEE-E--cCCCCCCcCHHHHHHhhcC--CC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDF-I--NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v-~--~~~~~~~~~~~~~i~~~~~--~g 273 (390)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++.... + |-.+ ..++.+.+.+... ++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~ 80 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGG 80 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 46899999998 9999999999999999 9999999999877664 4543322 2 2222 2233333333322 37
Q ss_pred ccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 274 ADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 274 ~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
+|+++++.|... ..+.++..|.. .+|+|+.++...
T Consensus 81 idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~ 141 (244)
T d1nffa_ 81 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE 141 (244)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccc
Confidence 999999998622 12334444433 238999998644
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.17 E-value=0.00052 Score=59.91 Aligned_cols=81 Identities=21% Similarity=0.282 Sum_probs=55.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC---CcEEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG---ITDFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g---~~~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++ ....+..+-.+..++.+.+.+... +++
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 83 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 6899999998 9999999999999999 99999999988776643 43 222222211112233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++++.|.
T Consensus 84 D~lVnnAG~ 92 (268)
T d2bgka1 84 DIMFGNVGV 92 (268)
T ss_dssp CEEEECCCC
T ss_pred ceecccccc
Confidence 999998874
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.15 E-value=0.0014 Score=52.72 Aligned_cols=98 Identities=11% Similarity=-0.062 Sum_probs=64.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+++|||+|+|.+|..+++.+...|. +|++++++.++.+.+.+-.......... ........+.. ...|.++.+.
T Consensus 1 ~~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~---~~~~~~~~~~i-~~~~~~i~~~ 75 (182)
T d1e5qa1 1 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLD---VNDDAALDAEV-AKHDLVISLI 75 (182)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECC---TTCHHHHHHHH-TTSSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhccccccccccc---ccchhhhHhhh-hccceeEeec
Confidence 36799999999999999999999999 9999999999988876533323222222 11111222211 2578888888
Q ss_pred cChHHHHHHHHHhccCCceEEEEc
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+..........++..+ ..++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~~ 98 (182)
T d1e5qa1 76 PYTFHATVIKSAIRQK-KHVVTTS 98 (182)
T ss_dssp CGGGHHHHHHHHHHHT-CEEECSS
T ss_pred cchhhhHHHHHHHhhc-cceeecc
Confidence 7766445555555555 5555443
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.15 E-value=0.00068 Score=58.62 Aligned_cols=81 Identities=16% Similarity=0.286 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+|+++||+|+ | ++|.+.++.+...|+ +|+.++++++..+.++ ..+....+..+-.+..++.+.+.+... +
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence 6899999998 5 799999999999999 8999998876554443 234334443322112233333332222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 86 ~iDilVnnag~ 96 (256)
T d1ulua_ 86 GLDYLVHAIAF 96 (256)
T ss_dssp SEEEEEECCCC
T ss_pred CceEEEecccc
Confidence 79999998874
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.12 E-value=8.3e-05 Score=63.91 Aligned_cols=99 Identities=15% Similarity=0.182 Sum_probs=64.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCc----CHHHHHHhhcCC-Ccc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK----TVSQVIKEMTDG-GAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~----~~~~~i~~~~~~-g~D 275 (390)
.|++|||+|+ +++|.+.++.+...|+ +|+.+++++.+.. .....+.... ... .+.+.+.+..+. ++|
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~iD 73 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTD-SFTEQADQVTAEVGKLLGDQKVD 73 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCS-CHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeeccc-CcHHHHHHHHHHHHHHhCCCCce
Confidence 4789999998 9999999999999999 9999987654321 1111111111 001 123333333344 799
Q ss_pred EEEEcccChH--------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 276 YCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 276 ~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
++++++|... ..+.+++.|+++ |+++.++...
T Consensus 74 ~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~ 131 (236)
T d1dhra_ 74 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKA 131 (236)
T ss_dssp EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred EEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHH
Confidence 9999987411 234566778887 9999998543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.11 E-value=0.0027 Score=48.74 Aligned_cols=75 Identities=17% Similarity=0.218 Sum_probs=57.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|+|+|+|.+|...++.+...|. .|++++.++++.+.+.+ ++...+. .+. .-.+.+++..-..+|.++-+++.
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~vi~-Gd~----~~~~~l~~~~i~~a~~vv~~t~~ 75 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDC----TKIKTLEDAGIEDADMYIAVTGK 75 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCT----TSHHHHHHTTTTTCSEEEECCSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhhhcc-Ccc----cchhhhhhcChhhhhhhcccCCc
Confidence 68999999999999999999999 99999999999988865 5654433 222 23445555433489999999888
Q ss_pred hH
Q 016363 284 TS 285 (390)
Q Consensus 284 ~~ 285 (390)
..
T Consensus 76 d~ 77 (132)
T d1lssa_ 76 EE 77 (132)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=97.11 E-value=0.00047 Score=60.52 Aligned_cols=78 Identities=19% Similarity=0.170 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEE---cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI---NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~---~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++..... |-.+ ..++.+.+.+... +++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i 80 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS--LEDQKQAASRCVARFGKI 80 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc--HHHHHHHHHHHHHHhCCc
Confidence 5899999998 9999999999999999 9999999999876654 46544322 2222 2223333333322 379
Q ss_pred cEEEEccc
Q 016363 275 DYCFECIG 282 (390)
Q Consensus 275 D~vid~~g 282 (390)
|+++++.|
T Consensus 81 dilvnnAG 88 (276)
T d1bdba_ 81 DTLIPNAG 88 (276)
T ss_dssp CEEECCCC
T ss_pred cccccccc
Confidence 99999887
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.11 E-value=0.00051 Score=59.56 Aligned_cols=79 Identities=24% Similarity=0.298 Sum_probs=57.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEEE---cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFI---NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v~---~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++..... |-.+ ..++.+.+.+... +++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~~~g~i 80 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD--QASIDRCVAELLDRWGSI 80 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC--HHHHHHHHHHHHHHhCCc
Confidence 5889999998 9999999999999999 999999999887655 557755432 2222 2233333333322 389
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++++.|.
T Consensus 81 DilVnnAg~ 89 (256)
T d1k2wa_ 81 DILVNNAAL 89 (256)
T ss_dssp CEEEECCCC
T ss_pred cEEEeeccc
Confidence 999999885
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.08 E-value=0.0016 Score=56.40 Aligned_cols=106 Identities=16% Similarity=0.284 Sum_probs=67.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHHHH-----HhcCCcEEEcCCCCC-CcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIG-----KKFGITDFINPATCG-DKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~-----~~~g~~~v~~~~~~~-~~~~~~~i~~~~~-- 271 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++ ++.+.+ ...|.......-|.. ..++.+.+.+...
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 6889999998 9999999999999999 999999874 444433 224544332222211 1223333333222
Q ss_pred CCccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 272 GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 272 ~g~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
+++|+++++.|... ..+.+++.|++ ++|+|+.++...
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~ 144 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAH 144 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccc
Confidence 37999999988522 23455566654 238999888543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.08 E-value=0.00041 Score=59.78 Aligned_cols=80 Identities=20% Similarity=0.172 Sum_probs=57.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.........+. ...+..+.+.+.. ++.|++++
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~-~~id~lVn 80 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDV-TKKKQIDQFANEV-ERLDVLFN 80 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCT-TCHHHHHHHHHHC-SCCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeec-ccccccccccccc-ccceeEEe
Confidence 46899999998 9999999999999999 9999999998887776643322221111 1234444444332 37999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+.|.
T Consensus 81 ~ag~ 84 (245)
T d2ag5a1 81 VAGF 84 (245)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9886
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.06 E-value=0.0007 Score=58.71 Aligned_cols=104 Identities=17% Similarity=0.269 Sum_probs=68.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhhHHH----HHhcCCcEEE-cCCCCCCcCHHHHHHhhcC--
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEI----GKKFGITDFI-NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~----~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~-- 271 (390)
-.|+++||+|+ +++|.+.++.+...|+ +|+.+. ++++..+. +++.|.+... ..+-.+..+..+.+.+...
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 36899999998 9999999999999999 888764 45444443 3456655432 2222112233333333322
Q ss_pred CCccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEcc
Q 016363 272 GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 272 ~g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+++|+++++.|... ..+.++..|++. |.++.+..
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s 141 (259)
T d1ja9a_ 83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS 141 (259)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence 37999999998632 356677788887 77776654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.04 E-value=0.0015 Score=56.99 Aligned_cols=104 Identities=21% Similarity=0.239 Sum_probs=69.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHH----HHHhcCCcEEEcC-CCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE----IGKKFGITDFINP-ATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~----~~~~~g~~~v~~~-~~~~~~~~~~~i~~~~~--~ 272 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.++++. +..+ .+++.+.+..... +-.+..++.+.+.+... +
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 95 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 95 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4899999998 9999999999999999 899887664 3333 3345565543322 22112334444444332 3
Q ss_pred CccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 273 GADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 273 g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++|+++.+.|... ..+.++..|... |+++.++..
T Consensus 96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~ 154 (272)
T d1g0oa_ 96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI 154 (272)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence 7999999888532 245667788888 888877643
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.04 E-value=0.00068 Score=57.41 Aligned_cols=105 Identities=16% Similarity=0.183 Sum_probs=70.9
Q ss_pred chhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CCcEEEcCCCCCCcC
Q 016363 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKT 261 (390)
Q Consensus 186 ~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~ 261 (390)
+...|. +.+.+.+++|++||-+|+| .|..++.+++.. . +|++++.+++-.+.+++. ....++..+. ...
T Consensus 56 p~~~a~--ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~--~~g 128 (224)
T d1vbfa_ 56 LNLGIF--MLDELDLHKGQKVLEIGTG-IGYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG--TLG 128 (224)
T ss_dssp HHHHHH--HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG--GGC
T ss_pred hhhHHH--HHHHhhhcccceEEEecCC-CCHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCch--hhc
Confidence 344443 3478899999999999986 567777777764 4 899999999888877653 1112222211 011
Q ss_pred HHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 262 ~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+ ...+.||.|+-+.+.+......++.|+++ |+++..
T Consensus 129 ~------~~~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p 164 (224)
T d1vbfa_ 129 Y------EEEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP 164 (224)
T ss_dssp C------GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred c------hhhhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence 1 11237999987666555467788999999 998874
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=97.03 E-value=0.001 Score=57.48 Aligned_cols=106 Identities=10% Similarity=0.035 Sum_probs=65.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEE-E-cCCCCCC-cCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDF-I-NPATCGD-KTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v-~-~~~~~~~-~~~~~~i~~~~~-- 271 (390)
+|++|||+|+ +++|.+.+..+...|+ +|+++.++.++.+.+.+ .+...+ + ..+...+ .++.+.+.+...
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 82 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence 5899999998 9999999999999999 88888777665544432 222222 1 1111001 123333333332
Q ss_pred CCccEEEEcccChH-----------------HHHHHHHHhcc----CCceEEEEcccC
Q 016363 272 GGADYCFECIGLTS-----------------VMNDAFNSSRE----GWGKTVILGVEM 308 (390)
Q Consensus 272 ~g~D~vid~~g~~~-----------------~~~~~~~~l~~----~~G~~v~~g~~~ 308 (390)
+++|++++++|... ..+.+++.|.. .+|+++.++...
T Consensus 83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~ 140 (254)
T d1sbya1 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVT 140 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechh
Confidence 37999999999632 23444555533 128898887543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.02 E-value=0.002 Score=57.13 Aligned_cols=102 Identities=19% Similarity=0.265 Sum_probs=66.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh---------hhHHHH----HhcCCcEEEcCCCCCCcCHHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP---------EKFEIG----KKFGITDFINPATCGDKTVSQVIK 267 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~---------~~~~~~----~~~g~~~v~~~~~~~~~~~~~~i~ 267 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+..+++. ++.+.+ ...+.....+..+ ..+..+.+.
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~v~ 82 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK 82 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch--HHHHHHHHH
Confidence 5889999998 9999999999999999 999986543 223222 2234444444443 133333343
Q ss_pred hhcC--CCccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcc
Q 016363 268 EMTD--GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV 306 (390)
Q Consensus 268 ~~~~--~g~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~ 306 (390)
+... |++|+++++.|... ..+.++..|+. ++|+||.++.
T Consensus 83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS 149 (302)
T d1gz6a_ 83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS 149 (302)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence 3322 37999999988522 24455666643 3389999985
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.00068 Score=58.69 Aligned_cols=81 Identities=19% Similarity=0.207 Sum_probs=55.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEE-cCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFI-NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~-~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+... ..+-.++.++.+.+.+... ++
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~ 88 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6899999998 9999999999999999 999999998876654 345544322 2211111223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 89 iDilvnnAG~ 98 (255)
T d1fmca_ 89 VDILVNNAGG 98 (255)
T ss_dssp CCEEEECCCC
T ss_pred CCEeeeCCcC
Confidence 9999999885
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.96 E-value=0.0023 Score=54.35 Aligned_cols=72 Identities=19% Similarity=0.164 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++. ++.+...+. |-. ..+ +.+.+.. +++|++++
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv~----~~~-~~~~~~~-g~iD~lVn 72 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDLR----KDL-DLLFEKV-KEVDILVL 72 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCTT----TCH-HHHHHHS-CCCSEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcchH----HHH-HHHHHHh-CCCcEEEe
Confidence 5789999998 9999999999999999 999999987654 444444333 222 233 3333322 47999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+.|.
T Consensus 73 nAG~ 76 (234)
T d1o5ia_ 73 NAGG 76 (234)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9885
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.94 E-value=0.00085 Score=58.67 Aligned_cols=100 Identities=17% Similarity=0.268 Sum_probs=63.9
Q ss_pred CCCEE-EEEcC-ChHHHHHHH-HHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEE--cCCCCCCcCH---HHHHHh
Q 016363 202 VGSTV-AIFGL-GAVGLAVAE-GARLNRASKIIGVDINPEKFEIG----KKFGIT-DFI--NPATCGDKTV---SQVIKE 268 (390)
Q Consensus 202 ~g~~V-lI~Ga-g~vG~~ai~-la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~---~~~i~~ 268 (390)
.|.+| ||+|+ +++|+++++ |++.-|+ +|+.+++++++.+.+ ++.+.. .++ |-.+ ..+. .+.+.+
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~--~~sv~~~~~~~~~ 77 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRK 77 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC--HHHHHHHHHHHHH
Confidence 36677 67798 999999876 5555688 999999999987654 333433 222 2222 1222 223322
Q ss_pred hcCCCccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEcc
Q 016363 269 MTDGGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
.. +++|++|++.|... ..+.++..|++. |+++.++.
T Consensus 78 ~~-g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS 138 (275)
T d1wmaa1 78 EY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS 138 (275)
T ss_dssp HH-SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred hc-CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence 22 37999999988521 234556677887 99998874
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.92 E-value=0.00052 Score=57.16 Aligned_cols=97 Identities=13% Similarity=0.117 Sum_probs=63.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.++|+|+|+ |.+|...+..+...|. +|++++|++++.......+.+.+. -+- .+ .+.+.+... +.|+||.++
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~-gD~---~d-~~~l~~al~-~~d~vi~~~ 75 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVV-GDV---LQ-AADVDKTVA-GQDAVIVLL 75 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEE-SCT---TS-HHHHHHHHT-TCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccccc-ccc---cc-hhhHHHHhc-CCCEEEEEe
Confidence 468999998 9999999998888899 999999999886554444444333 222 12 223333332 689999999
Q ss_pred cChH----------HHHHHHHHhccCC-ceEEEEcc
Q 016363 282 GLTS----------VMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 282 g~~~----------~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
|... ....+++.++..+ .+++.++.
T Consensus 76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss 111 (205)
T d1hdoa_ 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (205)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence 8532 1234555555541 36777653
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.89 E-value=0.0035 Score=50.63 Aligned_cols=85 Identities=18% Similarity=0.157 Sum_probs=59.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc-------CCCCCCcCHHHHHHhhcCCCccE
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN-------PATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~-------~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+|.|+|+|.+|++.+..+...|. .|+..++++++.+.+++.+...... .......+..+.+. .+|+
T Consensus 2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~aD~ 75 (184)
T d1bg6a2 2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DADV 75 (184)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT-----TCSE
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CCCE
Confidence 689999999999999999999999 9999999999998887655322111 11000122333332 6999
Q ss_pred EEEcccChHHHHHHHHHhc
Q 016363 277 CFECIGLTSVMNDAFNSSR 295 (390)
Q Consensus 277 vid~~g~~~~~~~~~~~l~ 295 (390)
+|-++.... ....++.++
T Consensus 76 iii~v~~~~-~~~~~~~i~ 93 (184)
T d1bg6a2 76 ILIVVPAIH-HASIAANIA 93 (184)
T ss_dssp EEECSCGGG-HHHHHHHHG
T ss_pred EEEEEchhH-HHHHHHHhh
Confidence 999998765 555444443
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=96.89 E-value=0.00084 Score=57.78 Aligned_cols=101 Identities=11% Similarity=0.091 Sum_probs=67.5
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cC-CcEEEcCCCCCCcCHHHHHHh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FG-ITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g-~~~v~~~~~~~~~~~~~~i~~ 268 (390)
...++++||++||=.|+|. |.++..+|+..|. .+|++++.+++..+.+++ ++ .+.+-... .++. +
T Consensus 78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~----~Di~----~ 148 (250)
T d1yb2a1 78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR----SDIA----D 148 (250)
T ss_dssp ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC----SCTT----T
T ss_pred HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE----eeee----c
Confidence 3678999999999999854 6667778877653 289999999998887764 22 22221111 1221 1
Q ss_pred hcCC-CccEEEEcccC-hHHHHHHHHHhccCCceEEEEc
Q 016363 269 MTDG-GADYCFECIGL-TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~-g~D~vid~~g~-~~~~~~~~~~l~~~~G~~v~~g 305 (390)
...+ .+|.|+--... ...+..+.+.|+++ |+++.+.
T Consensus 149 ~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~ 186 (250)
T d1yb2a1 149 FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL 186 (250)
T ss_dssp CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred ccccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence 2233 79999854444 34578899999999 9998764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.89 E-value=0.0015 Score=56.42 Aligned_cols=78 Identities=12% Similarity=0.195 Sum_probs=54.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEE---cCCCCCCcCHHHHHHhhcC--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFI---NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~---~~~~~~~~~~~~~i~~~~~--~ 272 (390)
|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+... |-.+ ..++.+.+.+... +
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g 78 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERYG 78 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 567899998 9999999999999999 999999998876654 345544322 2222 1233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 79 ~iDilVnnAG~ 89 (257)
T d2rhca1 79 PVDVLVNNAGR 89 (257)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEecccc
Confidence 79999999885
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=96.88 E-value=0.0014 Score=57.84 Aligned_cols=81 Identities=12% Similarity=0.067 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----KKFGITD-FINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ .+.|... .+..+-.+..+..+.+.... .+
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 102 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 102 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence 5799999998 9999999999999999 999999998876543 2344433 22222211122222222222 23
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 103 ~iDilvnnAg~ 113 (294)
T d1w6ua_ 103 HPNIVINNAAG 113 (294)
T ss_dssp SCSEEEECCCC
T ss_pred ccchhhhhhhh
Confidence 89999999885
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.87 E-value=0.0011 Score=58.03 Aligned_cols=81 Identities=20% Similarity=0.222 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCC--cE--EEcCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI--TD--FINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~--~~--v~~~~~~~~~~~~~~i~~~~~- 271 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+. .. .+..+-.+..++.+.+.+...
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5889999998 9999999999999999 9999999998876553 3332 11 221111112233333333322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
|++|+++++.|.
T Consensus 82 ~G~iDilVnnAG~ 94 (274)
T d1xhla_ 82 FGKIDILVNNAGA 94 (274)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCceEEEeeccc
Confidence 379999998874
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.83 E-value=0.0016 Score=50.17 Aligned_cols=75 Identities=23% Similarity=0.348 Sum_probs=57.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+++|+|.|.+|..+++.+...|. .|++++.++++.+.++..+...++.... +++ .+.+..-..+|.++-+++..
T Consensus 2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~gd~~--~~~---~l~~a~i~~a~~vi~~~~~~ 75 (134)
T d2hmva1 2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANAT--EEN---ELLSLGIRNFEYVIVAIGAN 75 (134)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEECCTT--CTT---HHHHHTGGGCSEEEECCCSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceeeecc--cch---hhhccCCccccEEEEEcCch
Confidence 57888999999999999999999 9999999999999998888765553221 123 33333223689998888765
Q ss_pred H
Q 016363 285 S 285 (390)
Q Consensus 285 ~ 285 (390)
.
T Consensus 76 ~ 76 (134)
T d2hmva1 76 I 76 (134)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.82 E-value=0.0014 Score=56.43 Aligned_cols=98 Identities=11% Similarity=0.091 Sum_probs=65.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC----CcEEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----ITDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
|+||+|+ +++|.+.++.+...|+ +|+.++++.++.+.++..+ .-.+.+. .+..+.+.+... |++|++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~-----~~~~~~~~~~~~~~G~iDiL 75 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSE-----QEPAELIEAVTSAYGQVDVL 75 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCC-----CSHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCH-----HHHHHHHHHHHHHcCCCCEE
Confidence 7899998 8999999999999999 9999999988887775532 2223222 334443333322 379999
Q ss_pred EEcccChH--------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 278 FECIGLTS--------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 278 id~~g~~~--------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
+++.|... ..+.++..|++ ++|+|+.++...
T Consensus 76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~ 133 (252)
T d1zmta1 76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSAT 133 (252)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCST
T ss_pred EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccc
Confidence 98766311 13345555544 238999998644
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=96.78 E-value=0.0031 Score=54.70 Aligned_cols=101 Identities=18% Similarity=0.245 Sum_probs=72.2
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCc-E-EEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT-D-FINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~-~-v~~~~~~~~~~~~~~i 266 (390)
+...++++||++||=.|+|. |.+++.+|+..+. .+|++++.+++..+.+++ ++.. . .+... ++
T Consensus 95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-----d~---- 164 (266)
T d1o54a_ 95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-----DI---- 164 (266)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-----CG----
T ss_pred HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-----cc----
Confidence 45789999999999999865 7777788888763 289999999998887754 4532 2 22222 22
Q ss_pred HhhcCC-CccEEEEcccCh-HHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~-g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 305 (390)
...... .+|.|+--++.+ ..+..+.+.|+++ |+++.+.
T Consensus 165 ~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~ 204 (266)
T d1o54a_ 165 SEGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC 204 (266)
T ss_dssp GGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred cccccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence 111223 799888656654 4678999999999 9998664
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0019 Score=57.13 Aligned_cols=84 Identities=14% Similarity=0.199 Sum_probs=55.9
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc--------CCcEE-EcCCCCCCcCHHHHHH
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF--------GITDF-INPATCGDKTVSQVIK 267 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~--------g~~~v-~~~~~~~~~~~~~~i~ 267 (390)
+.-+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. ++ +...+ +..+-.+..++.+.+.
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 86 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 86 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence 3457899999998 9999999999999999 9999999988765442 22 22222 2111101223333333
Q ss_pred hhcC--CCccEEEEcccC
Q 016363 268 EMTD--GGADYCFECIGL 283 (390)
Q Consensus 268 ~~~~--~g~D~vid~~g~ 283 (390)
+... +++|+++++.|.
T Consensus 87 ~~~~~~G~iDiLVnnAg~ 104 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGG 104 (297)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHhCCeEEEEeeccc
Confidence 3322 379999999885
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.77 E-value=0.0033 Score=51.16 Aligned_cols=97 Identities=12% Similarity=0.133 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcC----C-cEEEcCCCCCCcCHHHHHHhhcC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFG----I-TDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g----~-~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
-++.+|||+|+|+.+.+++..+...|+++++.+.|++++.+.+. +++ . ..+.+..+ ...+.+.+
T Consensus 16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~----- 88 (182)
T d1vi2a1 16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD--QQAFAEAL----- 88 (182)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHH-----
T ss_pred cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc--ccchhhhh-----
Confidence 36789999999999999999999999989999999887665443 221 1 12333332 01122222
Q ss_pred CCccEEEEcccChHH------HHHHHHHhccCCceEEEEc
Q 016363 272 GGADYCFECIGLTSV------MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 272 ~g~D~vid~~g~~~~------~~~~~~~l~~~~G~~v~~g 305 (390)
..+|+||+|++-... +..-+..+++. ..++++-
T Consensus 89 ~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~-~~v~Di~ 127 (182)
T d1vi2a1 89 ASADILTNGTKVGMKPLENESLVNDISLLHPG-LLVTECV 127 (182)
T ss_dssp HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTT-CEEEECC
T ss_pred cccceeccccCCccccccchhhhhHHHhhhcc-hhhHHhh
Confidence 168999999874321 00112345555 6666664
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=96.76 E-value=0.0023 Score=55.29 Aligned_cols=79 Identities=24% Similarity=0.280 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----c--CCcEE-E--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GITDF-I--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~--g~~~v-~--~~~~~~~~~~~~~i~~~~~ 271 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ . +.... + |-.+ ..++.+.+.+...
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~ 79 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE 79 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC--HHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 99999999988765432 2 22222 2 3222 2233333333322
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
|++|+++++.|.
T Consensus 80 ~~G~iDiLVnnAG~ 93 (258)
T d1iy8a_ 80 RFGRIDGFFNNAGI 93 (258)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HhCCCCEEEECCcc
Confidence 379999998873
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.75 E-value=0.0015 Score=56.99 Aligned_cols=79 Identities=20% Similarity=0.238 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC--cE--EE--cCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--TD--FI--NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~--~~--v~--~~~~~~~~~~~~~i~~~~ 270 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ .+. .. .+ |-.+ ..++.+.+.+..
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~ 80 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL 80 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC--HHHHHHHHHHHH
Confidence 5789999998 9999999999999999 99999999988765532 332 11 22 2222 122333333332
Q ss_pred C--CCccEEEEcccC
Q 016363 271 D--GGADYCFECIGL 283 (390)
Q Consensus 271 ~--~g~D~vid~~g~ 283 (390)
. +++|+++++.|.
T Consensus 81 ~~~g~iDilvnnAG~ 95 (272)
T d1xkqa_ 81 KQFGKIDVLVNNAGA 95 (272)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHhCCceEEEeCCcc
Confidence 2 379999998774
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.75 E-value=0.0015 Score=56.73 Aligned_cols=79 Identities=22% Similarity=0.238 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHH----HHHhcCCcEEE---cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFE----IGKKFGITDFI---NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~----~~~~~g~~~v~---~~~~~~~~~~~~~i~~~~~- 271 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.++++.+ +.+ .+++.|.+... |-.+ ..+..+.+.+...
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~ 82 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIKE 82 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 6889999998 9999999999999999 9999998754 333 33456654332 2222 1223333333222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 83 ~G~iDiLVnnAG~ 95 (261)
T d1geea_ 83 FGKLDVMINNAGL 95 (261)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEeecccee
Confidence 379999999886
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.74 E-value=0.0012 Score=57.25 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-----HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----KKFGITDF-INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-----~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+.. +.-+-.+..++.+.+.+... +
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 86 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5889999998 9999999999999999 999999998776433 33564432 21111112233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 87 ~iDilVnnAg~ 97 (260)
T d1h5qa_ 87 PISGLIANAGV 97 (260)
T ss_dssp SEEEEEECCCC
T ss_pred CCcEecccccc
Confidence 79999998874
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.74 E-value=0.0014 Score=56.30 Aligned_cols=79 Identities=18% Similarity=0.249 Sum_probs=54.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHhcCCc--EEE--cCCCCCCcC---HHHHHHhhcCC-
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGIT--DFI--NPATCGDKT---VSQVIKEMTDG- 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~~g~~--~v~--~~~~~~~~~---~~~~i~~~~~~- 272 (390)
.++|||+|+ +++|.+.++.+...|+. +|+++.|++++.+.+++.... +++ |-.+ ..+ +.+.+.+..+.
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC--HHHHHHHHHHHHHHhCCC
Confidence 478999998 99999999888888863 799999999998888775322 222 2222 122 23334333344
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
+.|+++++.|.
T Consensus 81 ~idilinnAG~ 91 (250)
T d1yo6a1 81 GLSLLINNAGV 91 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CeEEEEEcCcc
Confidence 69999999884
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.72 E-value=0.0042 Score=49.47 Aligned_cols=75 Identities=17% Similarity=0.282 Sum_probs=55.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC-cEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|.|+|+|.+|...+..++..|. +|++.++++++.+.+++.+. +...+..+ .+ ...|+||-++..
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~--------~~-----~~~DiIilavp~ 67 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS--------LL-----QTAKIIFLCTPI 67 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG--------GG-----TTCSEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc--------cc-----cccccccccCcH
Confidence 58899999999998888889999 99999999999999988874 33332111 11 268999998875
Q ss_pred hHHHHHHHHHh
Q 016363 284 TSVMNDAFNSS 294 (390)
Q Consensus 284 ~~~~~~~~~~l 294 (390)
.. ....++.+
T Consensus 68 ~~-~~~vl~~l 77 (165)
T d2f1ka2 68 QL-ILPTLEKL 77 (165)
T ss_dssp HH-HHHHHHHH
T ss_pred hh-hhhhhhhh
Confidence 54 44444433
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.72 E-value=0.0071 Score=47.84 Aligned_cols=100 Identities=16% Similarity=0.254 Sum_probs=72.5
Q ss_pred HHHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHh
Q 016363 190 GVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 190 A~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
.+.++.+..+ +-.|++|+|+|-|-+|...++.++.+|+ +|++++..|-+.-.+.--|. .+ ..+.+.+
T Consensus 10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~-~v--------~~~~~a~-- 77 (163)
T d1li4a1 10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGY-EV--------TTMDEAC-- 77 (163)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTC-EE--------CCHHHHT--
T ss_pred HHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCce-Ee--------eehhhhh--
Confidence 4445556555 4589999999999999999999999999 99999998866444433343 22 1233332
Q ss_pred hcCCCccEEEEcccChHHH-HHHHHHhccCCceEEEEc
Q 016363 269 MTDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g 305 (390)
...|+++-++|+.+.+ ..-++.|+++ ..+...|
T Consensus 78 ---~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~G 111 (163)
T d1li4a1 78 ---QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIG 111 (163)
T ss_dssp ---TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECS
T ss_pred ---hhccEEEecCCCccchhHHHHHhccCC-eEEEEec
Confidence 2589999999986534 5788899986 5665555
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.70 E-value=0.0017 Score=56.28 Aligned_cols=79 Identities=19% Similarity=0.221 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCC--c--EEE--cCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI--T--DFI--NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~--~--~v~--~~~~~~~~~~~~~i~~~~ 270 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+. . ..+ |-.+ ..+..+.+.+..
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~ 80 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL 80 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC--HHHHHHHHHHHH
Confidence 6889999998 9999999999999999 9999999998876553 2332 1 122 2222 122333333332
Q ss_pred C--CCccEEEEcccC
Q 016363 271 D--GGADYCFECIGL 283 (390)
Q Consensus 271 ~--~g~D~vid~~g~ 283 (390)
. +++|+++++.|.
T Consensus 81 ~~~g~iDilvnnAG~ 95 (264)
T d1spxa_ 81 GKFGKLDILVNNAGA 95 (264)
T ss_dssp HHHSCCCEEEECCC-
T ss_pred HHhCCCCEeeccccc
Confidence 2 379999999874
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.67 E-value=0.0039 Score=53.60 Aligned_cols=83 Identities=16% Similarity=0.161 Sum_probs=54.0
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-------HHHHHhcCCcEEE---cCCCCCCcCHHHHHH
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FEIGKKFGITDFI---NPATCGDKTVSQVIK 267 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-------~~~~~~~g~~~v~---~~~~~~~~~~~~~i~ 267 (390)
..+|+.++||+|+ +++|++.++.+...|+++|+.+.|+..+ .+.++..|....+ |-.+ ..++.+.+.
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d--~~~~~~~~~ 82 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD--RESVRELLG 82 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHH
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch--HHHHHHhhc
Confidence 4688999999998 9999999998888898668877776422 2233456654332 2222 122333333
Q ss_pred hhcCC-CccEEEEcccC
Q 016363 268 EMTDG-GADYCFECIGL 283 (390)
Q Consensus 268 ~~~~~-g~D~vid~~g~ 283 (390)
++... +.|.++.+.|.
T Consensus 83 ~i~~~~~i~~vv~~ag~ 99 (259)
T d2fr1a1 83 GIGDDVPLSAVFHAAAT 99 (259)
T ss_dssp TSCTTSCEEEEEECCCC
T ss_pred ccccccccccccccccc
Confidence 33333 79999998885
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.67 E-value=0.00029 Score=60.28 Aligned_cols=94 Identities=18% Similarity=0.221 Sum_probs=61.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCH-------HHHHHhhc-CCC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV-------SQVIKEMT-DGG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-------~~~i~~~~-~~g 273 (390)
+.+|||+|+ +++|.+.++.+...|+ +|+.+++++++.. ........+ .++ .+.+.... .++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~ 71 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA------DSNILVDGN---KNWTEQEQSILEQTASSLQGSQ 71 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS------SEEEECCTT---SCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc------cccceeccc---cCchhHHHHHHHHHHHHhcCCC
Confidence 457899998 9999999999999999 9999998865421 111111111 122 12222222 347
Q ss_pred ccEEEEcccChH--------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 274 ADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 274 ~D~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+|+++++.|... ..+..+..|+++ |+++.++..
T Consensus 72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~ 130 (235)
T d1ooea_ 72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA 130 (235)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence 999999988411 234566778887 999998854
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.62 E-value=0.0021 Score=54.30 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=66.4
Q ss_pred HHh--CCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCC-----c--EEEcCCCCCCcC
Q 016363 196 KVA--GVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGI-----T--DFINPATCGDKT 261 (390)
Q Consensus 196 ~~~--~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~-----~--~v~~~~~~~~~~ 261 (390)
+.. .+++|++||-+|+| .|..++.+|+..|. .+|++++.+++-.+.+++ .+. . .+...+
T Consensus 68 e~L~~~l~~g~~VLdiG~G-sGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD------ 140 (224)
T d1i1na_ 68 ELLFDQLHEGAKALDVGSG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD------ 140 (224)
T ss_dssp HHTTTTSCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC------
T ss_pred HHHhhccCCCCeEEEecCC-CCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee------
Confidence 444 78999999999985 47778888887763 389999999887666532 221 1 222111
Q ss_pred HHHHHHhhcC-CCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 262 VSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 262 ~~~~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
... -... +.||+|+.+..-....+.+++.|+++ |+++..
T Consensus 141 ~~~---~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p 180 (224)
T d1i1na_ 141 GRM---GYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP 180 (224)
T ss_dssp GGG---CCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred ccc---ccchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence 100 0112 27999997766666467889999999 998763
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.61 E-value=0.012 Score=46.97 Aligned_cols=90 Identities=23% Similarity=0.295 Sum_probs=63.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhcCC-cEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+|+|+|+|.+|...+..++..|. .+|++.+++++.++.+++.+. +......+ .......|+|+-|+.
T Consensus 3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~-----------~~~~~~~dlIila~p 71 (171)
T d2g5ca2 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA-----------KVEDFSPDFVMLSSP 71 (171)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG-----------GGGGTCCSEEEECSC
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh-----------hhhccccccccccCC
Confidence 69999999999999988888874 389999999999999998874 34443221 111126899998888
Q ss_pred ChHH---HHHHHHHhccCCceEEEEcc
Q 016363 283 LTSV---MNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 283 ~~~~---~~~~~~~l~~~~G~~v~~g~ 306 (390)
.... +..+.+.+.++ ..++.++.
T Consensus 72 ~~~~~~vl~~l~~~~~~~-~ii~d~~s 97 (171)
T d2g5ca2 72 VRTFREIAKKLSYILSED-ATVTDQGS 97 (171)
T ss_dssp HHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred chhhhhhhhhhhcccccc-cccccccc
Confidence 6542 33445566655 56666653
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=96.53 E-value=0.0083 Score=48.61 Aligned_cols=100 Identities=8% Similarity=0.036 Sum_probs=65.4
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC-Cc-----------------EEEcCCC
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-IT-----------------DFINPAT 256 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g-~~-----------------~v~~~~~ 256 (390)
+....+++|.+||.+|+| .|..++.+|+ .|+ +|++++.|++-++.+++.. .. .++..+-
T Consensus 13 ~~~l~~~~~~rvLd~GCG-~G~~a~~la~-~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 89 (201)
T d1pjza_ 13 WSSLNVVPGARVLVPLCG-KSQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF 89 (201)
T ss_dssp HHHHCCCTTCEEEETTTC-CSHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred HHHcCCCCCCEEEEecCc-CCHHHHHHHH-cCC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence 456789999999999986 3567777776 499 9999999999998887631 10 1111010
Q ss_pred CCCcCHHHHHHhhcCCCccEEEEcccC--------hHHHHHHHHHhccCCceEEEEc
Q 016363 257 CGDKTVSQVIKEMTDGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 257 ~~~~~~~~~i~~~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.++.... ...+|+|++...- ...++.+.+.|+++ |+++...
T Consensus 90 ---~~l~~~~----~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~ 138 (201)
T d1pjza_ 90 ---FALTARD----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT 138 (201)
T ss_dssp ---SSSTHHH----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred ---ccccccc----ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence 1111111 1168999874442 22467788999998 9876554
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=96.50 E-value=0.009 Score=51.24 Aligned_cols=95 Identities=19% Similarity=0.319 Sum_probs=63.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
..++|++||=+|+|. |..++.++ ..|+ +|++++.+++-.+.+++ .+.. .++. .++.+. ...+.
T Consensus 117 ~~~~g~~VLDiGcGs-G~l~i~aa-~~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~------~d~~~~---~~~~~ 184 (254)
T d2nxca1 117 HLRPGDKVLDLGTGS-GVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEAA---LPFGP 184 (254)
T ss_dssp HCCTTCEEEEETCTT-SHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHHH---GGGCC
T ss_pred hcCccCEEEEcccch-hHHHHHHH-hcCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe------cccccc---ccccc
Confidence 368999999999863 55565544 4687 89999999998877754 3433 2322 233222 22348
Q ss_pred ccEEEEcccChH---HHHHHHHHhccCCceEEEEcc
Q 016363 274 ADYCFECIGLTS---VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 274 ~D~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~ 306 (390)
||+|+....... .+..+.+.|+++ |+++..|.
T Consensus 185 fD~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgi 219 (254)
T d2nxca1 185 FDLLVANLYAELHAALAPRYREALVPG-GRALLTGI 219 (254)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred cchhhhccccccHHHHHHHHHHhcCCC-cEEEEEec
Confidence 999996544332 235677899998 99987653
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.49 E-value=0.0041 Score=53.53 Aligned_cols=79 Identities=15% Similarity=0.170 Sum_probs=52.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
+.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+.. +.-+-.+..++.+.+.+... |++|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 35689998 9999999998888999 999999999887654 34454432 21111112223333333322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++++++|.
T Consensus 81 ilVnnAG~ 88 (255)
T d1gega_ 81 VIVNNAGV 88 (255)
T ss_dssp EEEECCCC
T ss_pred EEEecccc
Confidence 99999885
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.49 E-value=0.0077 Score=52.80 Aligned_cols=103 Identities=15% Similarity=0.201 Sum_probs=69.5
Q ss_pred HHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHh
Q 016363 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 193 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
.+.+.+++++|++||=+|+|- |..+..+|+..|+ +|++++.+++..+.++ +.|....+.... .++ .
T Consensus 52 ~~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~---~d~-----~ 121 (291)
T d1kpia_ 52 LALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGW-----E 121 (291)
T ss_dssp HHHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE---CCG-----G
T ss_pred HHHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh---hcc-----c
Confidence 355888999999999999853 3456788888899 9999999999866554 345332221111 121 1
Q ss_pred hcCCCccEEEE-----cccC----------hHHHHHHHHHhccCCceEEEEcc
Q 016363 269 MTDGGADYCFE-----CIGL----------TSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 269 ~~~~g~D~vid-----~~g~----------~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
...+.||.|+. .++. ...++.+.+.|+|+ |+++.-..
T Consensus 122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i 173 (291)
T d1kpia_ 122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI 173 (291)
T ss_dssp GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence 22348999864 3332 13467888999999 99886543
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=96.48 E-value=0.0054 Score=52.36 Aligned_cols=102 Identities=17% Similarity=0.196 Sum_probs=62.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.|||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.+ +..|.+.. +..+-.+..++.+.+.+... +++|
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 6788898 9999999999999999 88876 4566655444 34554432 21111111223333333222 3799
Q ss_pred EEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEccc
Q 016363 276 YCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVE 307 (390)
Q Consensus 276 ~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~ 307 (390)
+++++.|... ..+.+++.|.+ ++|+|+.++..
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~ 139 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV 139 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence 9999988522 24455666532 33999999853
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.43 E-value=0.0062 Score=48.94 Aligned_cols=92 Identities=11% Similarity=-0.004 Sum_probs=58.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC---CcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG---ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g---~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
..++.+|+|+|+|+.+.+++..+...+. +|+.+.|+.++.+.+.+ +. ....+..+. .....+|
T Consensus 15 ~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~------------~~~~~~d 81 (171)
T d1p77a1 15 LRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMDS------------IPLQTYD 81 (171)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CCCSCCS
T ss_pred CCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhcc------------ccccccc
Confidence 4578899999999999999888777555 99999999998776643 32 222222111 1123799
Q ss_pred EEEEcccChHHHH---HHHHHhccCCceEEEEc
Q 016363 276 YCFECIGLTSVMN---DAFNSSREGWGKTVILG 305 (390)
Q Consensus 276 ~vid~~g~~~~~~---~~~~~l~~~~G~~v~~g 305 (390)
++|+|++....-. .....+++. ..++.+-
T Consensus 82 iiIN~tp~g~~~~~~~~~~~~~~~~-~~~~D~v 113 (171)
T d1p77a1 82 LVINATSAGLSGGTASVDAEILKLG-SAFYDMQ 113 (171)
T ss_dssp EEEECCCC-------CCCHHHHHHC-SCEEESC
T ss_pred eeeecccccccccccchhhhhhccc-ceeeeee
Confidence 9999998654111 123345555 5665554
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.39 E-value=0.019 Score=45.38 Aligned_cols=86 Identities=15% Similarity=0.211 Sum_probs=63.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.+.... .+..+.++ ..|+||-|+.++
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~--------~~~~e~~~-----~~d~ii~~v~~~ 67 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA--------STAKAIAE-----QCDVIITMLPNS 67 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECCSSH
T ss_pred EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc--------ccHHHHHh-----CCCeEEEEcCCH
Confidence 58899999999999988888999 99999999999999988776321 13333443 479999999877
Q ss_pred HHHHHHH-------HHhccCCceEEEEc
Q 016363 285 SVMNDAF-------NSSREGWGKTVILG 305 (390)
Q Consensus 285 ~~~~~~~-------~~l~~~~G~~v~~g 305 (390)
...+..+ ..++++ ..++.++
T Consensus 68 ~~v~~v~~~~~~~~~~~~~g-~iiid~s 94 (161)
T d1vpda2 68 PHVKEVALGENGIIEGAKPG-TVLIDMS 94 (161)
T ss_dssp HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred HHHHHHHhCCcchhhccCCC-CEEEECC
Confidence 7555433 344554 5566555
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=96.35 E-value=0.0077 Score=51.21 Aligned_cols=102 Identities=14% Similarity=0.118 Sum_probs=65.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCC------eEEEecCChhhHHHHH----hcCCcEE-E--cCCCCCCcCHHHHHHhhc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRAS------KIIGVDINPEKFEIGK----KFGITDF-I--NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~------~Vi~~~~~~~~~~~~~----~~g~~~v-~--~~~~~~~~~~~~~i~~~~ 270 (390)
.|||+|+ +++|.+.+..+...|++ .|+..++++++.+.+. +.|.... + |-.+ ..++.+.+.+..
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~ 80 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTHIV 80 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHH
Confidence 5789998 99999999988888883 3899999998876553 3454322 2 2222 122333333322
Q ss_pred C--CCccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 271 D--GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 271 ~--~g~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
. |++|+++++.|... ..+.+++.|++ ++|+++.++...
T Consensus 81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~ 146 (240)
T d2bd0a1 81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVA 146 (240)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechh
Confidence 2 37999999988522 24455666644 238999887543
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=96.35 E-value=0.0054 Score=52.21 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=68.6
Q ss_pred HHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHH
Q 016363 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQV 265 (390)
Q Consensus 193 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~ 265 (390)
.+...++++||++||=+|+|. |..+..+++..|+ +|++++.++.-.+.+++ .|.. .++.. ++.+.
T Consensus 24 ~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~------d~~~~ 95 (245)
T d1nkva_ 24 TLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN------DAAGY 95 (245)
T ss_dssp HHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES------CCTTC
T ss_pred HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhh------HHhhc
Confidence 466889999999999999853 3456678888898 99999999988776654 3532 22221 11110
Q ss_pred HHhhcCCCccEEEEccc------ChHHHHHHHHHhccCCceEEEEc
Q 016363 266 IKEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 266 i~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
...+.+|+|+..-. -...+..+.+.|+++ |+++..-
T Consensus 96 ---~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~~ 137 (245)
T d1nkva_ 96 ---VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE 137 (245)
T ss_dssp ---CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred ---cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEEe
Confidence 12338999985321 234577888999999 9987653
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.31 E-value=0.009 Score=52.16 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=68.9
Q ss_pred HHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC-cE-EEcCCCCCCcCHHHHH
Q 016363 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TD-FINPATCGDKTVSQVI 266 (390)
Q Consensus 193 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~-~~-v~~~~~~~~~~~~~~i 266 (390)
.+.+.+++++|++||=+|+| .|..++.+|+..|+ +|++++.+++..+.+++ .|. +. .+... ++
T Consensus 53 ~~~~~l~l~~G~~VLDiGCG-~G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-----d~---- 121 (285)
T d1kpga_ 53 LALGKLGLQPGMTLLDVGCG-WGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-----GW---- 121 (285)
T ss_dssp HHHTTTTCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-----CG----
T ss_pred HHHHHcCCCCCCEEEEecCc-chHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-----hh----
Confidence 35578899999999999985 35677788888899 99999999998877754 231 11 12111 22
Q ss_pred HhhcCCCccEEEE-----cccCh---HHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFE-----CIGLT---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid-----~~g~~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
++ .++.+|.|+. .++.. ..++.+.+.|+++ |+++...
T Consensus 122 ~~-~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~ 166 (285)
T d1kpga_ 122 EQ-FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHT 166 (285)
T ss_dssp GG-CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred hc-ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEE
Confidence 11 2347888864 44432 2467788999999 9987644
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=96.26 E-value=0.0047 Score=53.52 Aligned_cols=82 Identities=10% Similarity=0.155 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHHH---h-cCCcEEEcCCCCCCcCHHHHHHhhcC--
Q 016363 201 EVGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK---K-FGITDFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~---~-~g~~~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
-+|+++||+|+ | ++|.+.++.+...|+ +|+.++++++..+.++ + .+...+...+..++.+..+.+.+...
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 81 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence 36899999986 5 699999999999999 9999999875333333 2 22222222222112333333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 82 g~id~lV~nag~ 93 (274)
T d2pd4a1 82 GSLDFIVHSVAF 93 (274)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCeEEeeccc
Confidence 379999988874
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=96.25 E-value=0.0057 Score=51.63 Aligned_cols=94 Identities=12% Similarity=0.135 Sum_probs=67.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.++++.+||=+|+| .|..+..+++ .|+ +|++++.+++-++.+++-+....+..+. .++ ....+.+|+|+
T Consensus 39 ~~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~---~~l-----~~~~~~fD~ii 107 (246)
T d2avna1 39 YLKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA---EDL-----PFPSGAFEAVL 107 (246)
T ss_dssp HCCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT---TSC-----CSCTTCEEEEE
T ss_pred hcCCCCEEEEECCC-Cchhcccccc-cce-EEEEeecccccccccccccccccccccc---ccc-----cccccccccee
Confidence 35678899988987 6888888876 588 9999999999999998877665554333 222 12234899998
Q ss_pred EcccC-------hHHHHHHHHHhccCCceEEEE
Q 016363 279 ECIGL-------TSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 279 d~~g~-------~~~~~~~~~~l~~~~G~~v~~ 304 (390)
..... ...+..+.+.|+++ |.++..
T Consensus 108 ~~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~ 139 (246)
T d2avna1 108 ALGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT 139 (246)
T ss_dssp ECSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred eecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence 64432 22467788999998 887643
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.23 E-value=0.0014 Score=55.89 Aligned_cols=75 Identities=16% Similarity=0.165 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~vi 278 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.. ...|-.+ ..++.+.+.+... +++|+++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~--~~~v~~~~~~~~~~~g~iDiLV 78 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV 78 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCC--HHHHHHHHHHHHHhcCCceEEE
Confidence 6889999998 9999999999999999 99999998776543321 1122222 1223333333322 3799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
+++|.
T Consensus 79 nnAG~ 83 (237)
T d1uzma1 79 SNAGL 83 (237)
T ss_dssp EECSC
T ss_pred eeecc
Confidence 99885
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.18 E-value=0.0037 Score=55.75 Aligned_cols=105 Identities=12% Similarity=0.151 Sum_probs=67.5
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHh----cC-----------CcEE-EcCCC
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK----FG-----------ITDF-INPAT 256 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~----~g-----------~~~v-~~~~~ 256 (390)
+...++++||++||=.|+|. |.+++.||+..|.. +|++++.+++..+.+++ ++ .+.+ +...
T Consensus 90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~- 167 (324)
T d2b25a1 90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK- 167 (324)
T ss_dssp HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES-
T ss_pred HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEec-
Confidence 44778999999999999864 88888899988743 89999999988877653 11 1111 1111
Q ss_pred CCCcCHHHHHHhhcCCCccEEEEcccCh-HHHHHHHHHhccCCceEEEEc
Q 016363 257 CGDKTVSQVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 257 ~~~~~~~~~i~~~~~~g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 305 (390)
++.+....+..+.+|.||--++.+ ..+..+.+.|+++ |+++.+.
T Consensus 168 ----di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~ 212 (324)
T d2b25a1 168 ----DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV 212 (324)
T ss_dssp ----CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred ----chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence 111111111223689887433432 3588899999999 9998764
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.17 E-value=0.011 Score=50.81 Aligned_cols=103 Identities=16% Similarity=0.190 Sum_probs=70.4
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHh----c-C--CcEE-EcCCCCCCcCHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK----F-G--ITDF-INPATCGDKTVSQ 264 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~----~-g--~~~v-~~~~~~~~~~~~~ 264 (390)
+...++++||++||=.|+| .|.++..||+..|.. +|+.++.+++..+.+++ + + .+.+ +... ++.+
T Consensus 88 Ii~~l~i~PG~~VLE~G~G-sG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~-----d~~~ 161 (264)
T d1i9ga_ 88 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS-----DLAD 161 (264)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS-----CGGG
T ss_pred HHHHhCCCCCCEEEecCcC-CcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec-----cccc
Confidence 4578999999999999875 477778888887642 89999999998887754 2 1 2222 2111 2211
Q ss_pred HHHhhcCCCccEEEEcccC-hHHHHHHHHHhccCCceEEEEc
Q 016363 265 VIKEMTDGGADYCFECIGL-TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 265 ~i~~~~~~g~D~vid~~g~-~~~~~~~~~~l~~~~G~~v~~g 305 (390)
. .+..+.+|.||--+.. ...+..+.+.|+++ |+++.+-
T Consensus 162 ~--~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~ 200 (264)
T d1i9ga_ 162 S--ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV 200 (264)
T ss_dssp C--CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred c--cccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence 0 1122379988754554 34578899999999 9998664
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.12 E-value=0.007 Score=51.66 Aligned_cols=77 Identities=13% Similarity=0.211 Sum_probs=50.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHH---HcCCCeEEEecCChhhHHHHHhc---CCc-EEE--cCCCCCCcCHHHHHH---hhc
Q 016363 204 STVAIFGL-GAVGLAVAEGAR---LNRASKIIGVDINPEKFEIGKKF---GIT-DFI--NPATCGDKTVSQVIK---EMT 270 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~---~~g~~~Vi~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~~~i~---~~~ 270 (390)
++|||+|+ +++|.+.++.+. ..|+ +|+++++++++.+.++++ +.. .++ |..+ ..+..+.+. ...
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIEGVT 79 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc--HHHHHHHHhhhHHHh
Confidence 58999998 999999887554 3577 999999999887666432 222 222 2222 233333333 333
Q ss_pred CC-CccEEEEcccC
Q 016363 271 DG-GADYCFECIGL 283 (390)
Q Consensus 271 ~~-g~D~vid~~g~ 283 (390)
.. ++|+++++.|.
T Consensus 80 ~~~~iDiLvnNAg~ 93 (248)
T d1snya_ 80 KDQGLNVLFNNAGI 93 (248)
T ss_dssp GGGCCSEEEECCCC
T ss_pred hcCCcceEEeeccc
Confidence 33 89999998874
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.10 E-value=0.0063 Score=43.49 Aligned_cols=71 Identities=17% Similarity=0.198 Sum_probs=47.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
+|++|+|+|.|..|+++++++...|+ +|++.+.++. ..+.++. +....+...+ . ..+. ++|.|+-
T Consensus 4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~---~---~~~~-----~~d~vi~ 70 (93)
T d2jfga1 4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMTPPGLDKLPE-AVERHTGSLN---D---EWLM-----AADLIVA 70 (93)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSSCTTGGGSCT-TSCEEESBCC---H---HHHH-----HCSEEEE
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcCchhHHHHhh-ccceeecccc---h---hhhc-----cCCEEEE
Confidence 57899999999999999999999999 9999997543 2222222 2223332222 1 1121 4788888
Q ss_pred cccChH
Q 016363 280 CIGLTS 285 (390)
Q Consensus 280 ~~g~~~ 285 (390)
+-|-+.
T Consensus 71 SPGi~~ 76 (93)
T d2jfga1 71 SPGIAL 76 (93)
T ss_dssp CTTSCT
T ss_pred CCCCCC
Confidence 777655
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=96.09 E-value=0.013 Score=49.02 Aligned_cols=100 Identities=15% Similarity=0.271 Sum_probs=67.5
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i~ 267 (390)
+.+.++++++++||=+|+| .|..+..+++. |+ +|++++.+++-++.+++ .+.+. ++..+. .++
T Consensus 7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~---~~l----- 75 (231)
T d1vl5a_ 7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM----- 75 (231)
T ss_dssp HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc---ccc-----
Confidence 5588999999999999986 56666666654 66 99999999987776643 34332 222221 111
Q ss_pred hhcCCCccEEEEccc-----Ch-HHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECIG-----LT-SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~g-----~~-~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+..+.+|+|+..-. .. ..+..+.+.|+++ |+++..-
T Consensus 76 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~ 118 (231)
T d1vl5a_ 76 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD 118 (231)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence 122347999985432 22 3578899999999 9988754
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=96.08 E-value=0.0098 Score=50.87 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=54.3
Q ss_pred CCCCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 200 VEVGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
.-+|+++||+|+ | ++|.+.+..+...|+ +|+.++++++..+.+.+ .+.......+..+..+..+...+....
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 80 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence 347899999987 6 689999999999999 89999998776555433 344444333221122233333333333
Q ss_pred --CccEEEEcccC
Q 016363 273 --GADYCFECIGL 283 (390)
Q Consensus 273 --g~D~vid~~g~ 283 (390)
..|+.+++.+.
T Consensus 81 ~~~~d~~v~~a~~ 93 (258)
T d1qsga_ 81 WPKFDGFVHSIGF 93 (258)
T ss_dssp CSSEEEEEECCCC
T ss_pred ccccceEEEeecc
Confidence 78999988764
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.08 E-value=0.014 Score=50.83 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=67.5
Q ss_pred HHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHh
Q 016363 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 193 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
.+.+.+++++|++||=+|+|-=| .+..+++..|+ +|++++.+++..+.+++ .|....+.... .++ +
T Consensus 43 ~~~~~l~l~~g~~VLDiGCG~G~-~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~---~d~-----~ 112 (280)
T d2fk8a1 43 LNLDKLDLKPGMTLLDIGCGWGT-TMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL---QGW-----E 112 (280)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSH-HHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE---SCG-----G
T ss_pred HHHHHcCCCCCCEEEEecCCchH-HHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh---hhh-----h
Confidence 35577889999999999986334 45668888899 99999999998877654 34221111111 111 1
Q ss_pred hcCCCccEEEE-----cccCh---HHHHHHHHHhccCCceEEEEc
Q 016363 269 MTDGGADYCFE-----CIGLT---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~g~D~vid-----~~g~~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
..++.+|.|+. .++.. ..++.+.+.|+++ |+++.-.
T Consensus 113 ~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~ 156 (280)
T d2fk8a1 113 DFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQS 156 (280)
T ss_dssp GCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred hhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEE
Confidence 12347998863 33322 2367788999999 9987643
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=95.96 E-value=0.0071 Score=50.98 Aligned_cols=100 Identities=17% Similarity=0.233 Sum_probs=66.0
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~ 267 (390)
+.+.+++++|++||=+|+| .|..+..+++. +. +|++++.++.-++.+++ .+.+ .++..+. .++
T Consensus 8 l~~~~~~~~~~rILDiGcG-tG~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~---~~~----- 76 (234)
T d1xxla_ 8 MIKTAECRAEHRVLDIGAG-AGHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESL----- 76 (234)
T ss_dssp HHHHHTCCTTCEEEEESCT-TSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-----
T ss_pred HHHHhCCCCCCEEEEeCCc-CcHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccc---ccc-----
Confidence 5588999999999999985 35666667664 56 99999999987766643 3332 2221111 111
Q ss_pred hhcCCCccEEEEcccC------hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+.++.+|+|+.+-.- ...++.+.+.|+++ |+++..-
T Consensus 77 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~ 119 (234)
T d1xxla_ 77 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD 119 (234)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence 1223479999864332 22478888999999 9887653
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.011 Score=50.22 Aligned_cols=47 Identities=30% Similarity=0.258 Sum_probs=40.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT 249 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~ 249 (390)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++..
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~ 52 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN 52 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence 6899999998 9999999999999999 999999998887655 446543
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.91 E-value=0.031 Score=43.53 Aligned_cols=82 Identities=23% Similarity=0.237 Sum_probs=55.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|.++|+|.+|.+.++-+...|..+|++.++++++.+.+.+ +|... .+..+ . + ...|+||=|+.
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~-~~~~~----~----v-----~~~Div~lavk- 66 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SATLP----E----L-----HSDDVLILAVK- 66 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCC----C----C-----CTTSEEEECSC-
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc-ccccc----c----c-----cccceEEEecC-
Confidence 58899999999988874444453399999999999887765 66533 32222 1 1 14789888886
Q ss_pred hHHHHHHHHHhccCCceEE
Q 016363 284 TSVMNDAFNSSREGWGKTV 302 (390)
Q Consensus 284 ~~~~~~~~~~l~~~~G~~v 302 (390)
+..+...++.+++. +.++
T Consensus 67 P~~~~~v~~~l~~~-~~~v 84 (152)
T d1yqga2 67 PQDMEAACKNIRTN-GALV 84 (152)
T ss_dssp HHHHHHHHTTCCCT-TCEE
T ss_pred HHHHHHhHHHHhhc-ccEE
Confidence 34467777777765 4443
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=95.90 E-value=0.0053 Score=53.46 Aligned_cols=101 Identities=14% Similarity=0.074 Sum_probs=67.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i 266 (390)
+.....+++|++||=+|+| .|..+..+++..|+ +|++++.++..++.+++ .|.. .++..+- .++
T Consensus 59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~---~~l---- 129 (282)
T d2o57a1 59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI---- 129 (282)
T ss_dssp HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC----
T ss_pred HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc---ccc----
Confidence 4455689999999999986 45667778887798 99999999988776654 3322 2222111 111
Q ss_pred HhhcCCCccEEEEccc-----C-hHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+.++.+|+|+..-. . ...+..+.+.|+++ |+++...
T Consensus 130 -~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~ 172 (282)
T d2o57a1 130 -PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITD 172 (282)
T ss_dssp -SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred -cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEE
Confidence 112237999975322 1 22467889999999 9988764
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.74 E-value=0.025 Score=46.31 Aligned_cols=86 Identities=17% Similarity=0.141 Sum_probs=60.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...+++++.+|+ +|++.++......... +. .. .++.+.+. ..|+|+-++
T Consensus 42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~~--~~----~~-----~~l~~~l~-----~sDii~~~~ 104 (197)
T d1j4aa1 42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEKK--GY----YV-----DSLDDLYK-----QADVISLHV 104 (197)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHT--TC----BC-----SCHHHHHH-----HCSEEEECS
T ss_pred cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccccc--ee----ee-----cccccccc-----ccccccccC
Confidence 48899999999999999999999999 9999997655432221 11 11 24555554 378888776
Q ss_pred cChH-----HHHHHHHHhccCCceEEEEc
Q 016363 282 GLTS-----VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~-----~~~~~~~~l~~~~G~~v~~g 305 (390)
+... .-...++.|+++ ..+|.++
T Consensus 105 plt~~T~~li~~~~l~~mk~~-a~lIN~s 132 (197)
T d1j4aa1 105 PDVPANVHMINDESIAKMKQD-VVIVNVS 132 (197)
T ss_dssp CCCGGGTTCBSHHHHHHSCTT-EEEEECS
T ss_pred CccccccccccHHHHhhhCCc-cEEEecC
Confidence 6322 124677888887 7777776
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.69 E-value=0.046 Score=42.83 Aligned_cols=99 Identities=18% Similarity=0.285 Sum_probs=72.1
Q ss_pred HHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 191 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.++.+..+ +-.|++++|.|=|-+|.-.++-++.+|+ +|+++...|-+.=++.--|. .+. ++.+.+
T Consensus 10 ~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf-~v~--------~~~~a~--- 76 (163)
T d1v8ba1 10 PDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGF-NVV--------TLDEIV--- 76 (163)
T ss_dssp HHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTC-EEC--------CHHHHT---
T ss_pred HHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCC-ccC--------chhHcc---
Confidence 344545555 4689999999999999999999999999 99999999865433322232 222 333333
Q ss_pred cCCCccEEEEcccChHH-HHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCFECIGLTSV-MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g 305 (390)
+..|+++-++|.... ...-++.|+.+ ..+...|
T Consensus 77 --~~aDi~vTaTGn~~vI~~~h~~~MKdg-aIl~N~G 110 (163)
T d1v8ba1 77 --DKGDFFITCTGNVDVIKLEHLLKMKNN-AVVGNIG 110 (163)
T ss_dssp --TTCSEEEECCSSSSSBCHHHHTTCCTT-CEEEECS
T ss_pred --ccCcEEEEcCCCCccccHHHHHHhhCC-eEEEecc
Confidence 258999999999764 35778999987 6666666
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.66 E-value=0.013 Score=48.69 Aligned_cols=73 Identities=18% Similarity=0.099 Sum_probs=48.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+|||+|+ |.+|...+..+...|.. .|+.+.+++++.+.+.. +.+.+. .+- .+. +.+.+... ++|.|+.+.
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~-~d~---~~~-~~~~~~~~-~~d~vi~~a 76 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFI-GDI---TDA-DSINPAFQ-GIDALVILT 76 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEE-CCT---TSH-HHHHHHHT-TCSEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEE-eee---ccc-cccccccc-cceeeEEEE
Confidence 58999998 99999999999888852 67788888877655432 233332 221 122 22222222 689999887
Q ss_pred cC
Q 016363 282 GL 283 (390)
Q Consensus 282 g~ 283 (390)
+.
T Consensus 77 ~~ 78 (252)
T d2q46a1 77 SA 78 (252)
T ss_dssp CC
T ss_pred ee
Confidence 64
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.56 E-value=0.022 Score=47.62 Aligned_cols=98 Identities=11% Similarity=0.168 Sum_probs=60.2
Q ss_pred CCCCCCEEEEEcCC--hHHHHHHHHHHHcCC---CeEEEecCChhhHHHHHh---------cCCc--EEEcCCCCCCcCH
Q 016363 199 GVEVGSTVAIFGLG--AVGLAVAEGARLNRA---SKIIGVDINPEKFEIGKK---------FGIT--DFINPATCGDKTV 262 (390)
Q Consensus 199 ~~~~g~~VlI~Gag--~vG~~ai~la~~~g~---~~Vi~~~~~~~~~~~~~~---------~g~~--~v~~~~~~~~~~~ 262 (390)
.+++|++||.+|+| -......+++...|. .+|++++..++-.+.+++ .+.. .++..+ .
T Consensus 77 ~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d------~ 150 (223)
T d1r18a_ 77 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD------G 150 (223)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC------G
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecc------c
Confidence 79999999999873 333334444444443 279999998876555532 1211 222211 1
Q ss_pred HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEE-Ec
Q 016363 263 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVI-LG 305 (390)
Q Consensus 263 ~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~-~g 305 (390)
.+.. ...+.||.|+-+.+-+...+..++.|+++ |+++. +|
T Consensus 151 ~~~~--~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~pvg 191 (223)
T d1r18a_ 151 RKGY--PPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPVG 191 (223)
T ss_dssp GGCC--GGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred cccc--ccccceeeEEEEeechhchHHHHHhcCCC-cEEEEEEe
Confidence 1110 11237999987666655457888999999 99876 44
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.55 E-value=0.038 Score=43.04 Aligned_cols=85 Identities=12% Similarity=0.159 Sum_probs=62.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|.++|+|.+|.+.+.-+...|. ++++.++++++.+.+ +++|.... .+..+.+. ..|+||-|+.-
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~--------~~~~~~~~-----~~dvIilavkp 67 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA--------MSHQDLID-----QVDLVILGIKP 67 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC--------SSHHHHHH-----TCSEEEECSCG
T ss_pred EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee--------chhhhhhh-----ccceeeeecch
Confidence 57899999999998886666777 999999999987776 45675432 13333433 58999988864
Q ss_pred hHHHHHHHHHhccCCceEEEEc
Q 016363 284 TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 284 ~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.. ....++.+.++ ..++.+.
T Consensus 68 ~~-~~~vl~~l~~~-~~iis~~ 87 (152)
T d2ahra2 68 QL-FETVLKPLHFK-QPIISMA 87 (152)
T ss_dssp GG-HHHHHTTSCCC-SCEEECC
T ss_pred Hh-HHHHhhhcccc-eeEeccc
Confidence 43 77788888876 6776554
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.48 E-value=0.039 Score=46.47 Aligned_cols=96 Identities=15% Similarity=0.259 Sum_probs=64.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHh
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~ 268 (390)
+.......++++||=+|+|. |..+..+++ .|+ +|++++.+++-++.+++ .+.. .++.. + +.+
T Consensus 33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~------d----~~~ 99 (251)
T d1wzna1 33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQG------D----VLE 99 (251)
T ss_dssp HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEES------C----GGG
T ss_pred HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheeh------h----hhh
Confidence 44556777888999999975 777777776 588 99999999987777654 2322 22221 1 122
Q ss_pred hcCC-CccEEEEcccC------h---HHHHHHHHHhccCCceEEE
Q 016363 269 MTDG-GADYCFECIGL------T---SVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 269 ~~~~-g~D~vid~~g~------~---~~~~~~~~~l~~~~G~~v~ 303 (390)
+..+ .+|+|+...+. + ..++.+.+.|+++ |.++.
T Consensus 100 l~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii 143 (251)
T d1wzna1 100 IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT 143 (251)
T ss_dssp CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred cccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence 3333 89999875432 1 2467788999998 98864
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.48 E-value=0.021 Score=46.92 Aligned_cols=81 Identities=22% Similarity=0.214 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
-.|.+|+|.|.|.+|..+++++...|+ +|++.+.++++......+|.+.+ ..+ + +..-..|+++=|
T Consensus 25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~-----~-------~~~~~~DI~iPc 90 (201)
T d1c1da1 25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE-----D-------VLSTPCDVFAPC 90 (201)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG-----G-------GGGCCCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc-----c-------cccccceeeecc
Confidence 378999999999999999999999999 99999999999988888876533 211 1 122278888866
Q ss_pred ccChHHHHHHHHHhc
Q 016363 281 IGLTSVMNDAFNSSR 295 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~ 295 (390)
..+...-....+.++
T Consensus 91 A~~~~I~~~~a~~i~ 105 (201)
T d1c1da1 91 AMGGVITTEVARTLD 105 (201)
T ss_dssp SCSCCBCHHHHHHCC
T ss_pred cccccccHHHHhhhh
Confidence 555442345556664
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.46 E-value=0.042 Score=44.18 Aligned_cols=37 Identities=24% Similarity=0.303 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
...+++|+|+|+|+.|+.|+..+...|. +|+..++++
T Consensus 40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~ 76 (179)
T d1ps9a3 40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS 76 (179)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence 4556899999999999999999999999 999999764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=95.44 E-value=0.018 Score=50.70 Aligned_cols=74 Identities=19% Similarity=0.236 Sum_probs=46.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC--hh---hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEE
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN--PE---KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 277 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~--~~---~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~v 277 (390)
+|||+|+ |.+|...++.+...|. +|+++++- .. +...+...+.-.++..+- .+ .+.+.++..+ ++|+|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di---~~-~~~l~~~~~~~~~d~V 76 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI---RN-KNDVTRLITKYMPDSC 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCT---TC-HHHHHHHHHHHCCSEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEccc---CC-HHHHHHHHHhcCCceE
Confidence 6999998 9999999998888899 99998631 22 233334443323332221 11 2233444445 79999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.+.
T Consensus 77 ih~aa~ 82 (338)
T d1orra_ 77 FHLAGQ 82 (338)
T ss_dssp EECCCC
T ss_pred Eeeccc
Confidence 998764
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.39 E-value=0.05 Score=47.15 Aligned_cols=104 Identities=16% Similarity=0.194 Sum_probs=60.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCC--eEEEecCChhhHHHH----Hhc---CCc-EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRAS--KIIGVDINPEKFEIG----KKF---GIT-DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~--~Vi~~~~~~~~~~~~----~~~---g~~-~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
.|||+|+ +++|.+.+..+...|++ .|+.+.++.++.+.+ +++ +.. ..+.-+-.+..++.+.+.+...+.
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~ 83 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR 83 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence 4677898 99999999999889983 244445554443322 332 222 222222211233444444444458
Q ss_pred ccEEEEcccChH-------------------------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 274 ADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 274 ~D~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
.|+++++.|... ..+.++..|.+ ++|+++.++...
T Consensus 84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~ 144 (285)
T d1jtva_ 84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVG 144 (285)
T ss_dssp CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGG
T ss_pred hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechh
Confidence 999999887522 23445555643 238999888543
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=95.33 E-value=0.059 Score=43.35 Aligned_cols=99 Identities=14% Similarity=0.176 Sum_probs=63.4
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC-cE--EEcCCCCCCcCHHHHHH
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TD--FINPATCGDKTVSQVIK 267 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~-~~--v~~~~~~~~~~~~~~i~ 267 (390)
....++++|++||=+|+|. |..++.+|+. +. +|++++.+++..+.+++ .|. +. ++. .+..+.+.
T Consensus 26 l~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~------gda~~~~~ 96 (186)
T d1l3ia_ 26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME------GDAPEALC 96 (186)
T ss_dssp HHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE------SCHHHHHT
T ss_pred HHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE------Cchhhccc
Confidence 3568999999999998732 3334455553 44 99999999998877754 553 22 222 23333321
Q ss_pred hhcCCCccEEEEcccCh---HHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
....+|.|+...+.. ..++.+.+.|+++ |+++...
T Consensus 97 --~~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~ 134 (186)
T d1l3ia_ 97 --KIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA 134 (186)
T ss_dssp --TSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred --ccCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence 123899998654432 2356778889998 9887553
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.33 E-value=0.066 Score=42.07 Aligned_cols=72 Identities=15% Similarity=0.212 Sum_probs=52.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
.+|.++|.|.+|...+.-+...|. .|++.++++++.+.+...+.... .+..+.+. ..|+++-|+..
T Consensus 2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~--------~~~~e~~~-----~~diii~~v~~ 67 (162)
T d3cuma2 2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA--------RSARDAVQ-----GADVVISMLPA 67 (162)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC--------SSHHHHHT-----SCSEEEECCSC
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcccc--------chhhhhcc-----ccCeeeecccc
Confidence 368999999999988887777899 99999999999998888765322 12222221 46777777776
Q ss_pred hHHHHH
Q 016363 284 TSVMND 289 (390)
Q Consensus 284 ~~~~~~ 289 (390)
......
T Consensus 68 ~~~~~~ 73 (162)
T d3cuma2 68 SQHVEG 73 (162)
T ss_dssp HHHHHH
T ss_pred hhhHHH
Confidence 654443
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.26 E-value=0.026 Score=47.22 Aligned_cols=108 Identities=13% Similarity=0.060 Sum_probs=67.4
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC-c------------EEEcCCCCCCcC
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-T------------DFINPATCGDKT 261 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~-~------------~v~~~~~~~~~~ 261 (390)
.+...+.++.+||..|+|. |..+..||+ .|+ +|++++-|+.-++.+++... . ....... ...+
T Consensus 38 ~~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~ 113 (229)
T d2bzga1 38 DTFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSS-GNIS 113 (229)
T ss_dssp HHHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT-SSEE
T ss_pred HHhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecC-CcEE
Confidence 3556788999999999965 677777776 699 99999999998887765221 1 1100000 0000
Q ss_pred H-HHHHHhh--c-CCCccEEEEcccC--------hHHHHHHHHHhccCCceEEEEccc
Q 016363 262 V-SQVIKEM--T-DGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 262 ~-~~~i~~~--~-~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+ ...+.++ . .+.+|+|+++.-- ...+..+.+.|+++ |+++.....
T Consensus 114 ~~~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~~ 170 (229)
T d2bzga1 114 LYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVLS 170 (229)
T ss_dssp EEESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEEE
T ss_pred EEEcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEcc
Confidence 0 0001111 1 2279999986542 22467888999999 988766543
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.24 E-value=0.099 Score=46.19 Aligned_cols=105 Identities=15% Similarity=0.178 Sum_probs=68.4
Q ss_pred HHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----------cCC----cEEEcCCCC
Q 016363 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----------FGI----TDFINPATC 257 (390)
Q Consensus 193 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----------~g~----~~v~~~~~~ 257 (390)
.+.+..+++++++||=+|+| .|..+.++|+..++.++++++.+++..+.+++ +|. -.++.. +.
T Consensus 142 ~~~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~g-d~ 219 (328)
T d1nw3a_ 142 QMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG-DF 219 (328)
T ss_dssp HHHHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEC-CT
T ss_pred HHHHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEEC-cc
Confidence 34578899999999988885 57778899999898789999999987665532 121 122322 21
Q ss_pred CCcCHHHHHHhhcCCCccEEEEc-ccC-h---HHHHHHHHHhccCCceEEEEc
Q 016363 258 GDKTVSQVIKEMTDGGADYCFEC-IGL-T---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~-~g~-~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+.++.+.+. .+|+|+-. .-. + ..+...++.|+++ |+++..-
T Consensus 220 ~~~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~ 266 (328)
T d1nw3a_ 220 LSEEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK 266 (328)
T ss_dssp TSHHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred cccccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence 1233333332 36888732 211 1 2456778889998 9998654
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.24 E-value=0.056 Score=49.24 Aligned_cols=106 Identities=16% Similarity=0.195 Sum_probs=68.5
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-----------C----CcEEEcCCCCC
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-----------G----ITDFINPATCG 258 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-----------g----~~~v~~~~~~~ 258 (390)
+.+..++++|+++|=+|+| +|..+.++|+..|+.+|++++.++.-.+.+++. + ........++.
T Consensus 208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~ 286 (406)
T d1u2za_ 208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV 286 (406)
T ss_dssp HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence 4588899999998888886 688899999999977899999998876665431 1 11221112111
Q ss_pred CcCHHHHHHhhcCCCccEEEEc-ccC----hHHHHHHHHHhccCCceEEEEc
Q 016363 259 DKTVSQVIKEMTDGGADYCFEC-IGL----TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~-~g~----~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+..+.. . ..+|+|+-. .-. ...+..+++.|+++ |+++..-
T Consensus 287 ~~~~~d~~---~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~ 333 (406)
T d1u2za_ 287 DNNRVAEL---I-PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK 333 (406)
T ss_dssp TCHHHHHH---G-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred hccccccc---c-ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence 12222221 1 157888742 211 22466788899998 9998753
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=95.21 E-value=0.014 Score=52.08 Aligned_cols=45 Identities=24% Similarity=0.180 Sum_probs=38.9
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
-+++|++|||+|+ |.+|...++.+...|+ +|++++++.++.+.++
T Consensus 7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~ 52 (342)
T d1y1pa1 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ 52 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred CCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence 3678999999998 9999999988888899 9999999987766554
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.14 E-value=0.013 Score=43.27 Aligned_cols=75 Identities=17% Similarity=0.264 Sum_probs=48.9
Q ss_pred CCCC-CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCC-CccE
Q 016363 200 VEVG-STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDG-GADY 276 (390)
Q Consensus 200 ~~~g-~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~-g~D~ 276 (390)
+.++ .+|.|+|+|.+|++.++-|+.+|+ ++++.+++++.- +..+....++ ++++ . +.+.++... ++|+
T Consensus 7 ~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~P--A~~va~~~i~~~~~d---~---~~l~~~~~~~~~Dv 77 (111)
T d1kjqa2 7 LRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADAP--AMHVAHRSHVINMLD---G---DALRRVVELEKPHY 77 (111)
T ss_dssp TSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTCG--GGGGSSEEEECCTTC---H---HHHHHHHHHHCCSE
T ss_pred CCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCCc--hhhcCCeEEECCCCC---H---HHHHHHHHhhCCce
Confidence 3444 469999999999999999999999 999999876643 2223333333 3333 2 334443333 6788
Q ss_pred E---EEcccC
Q 016363 277 C---FECIGL 283 (390)
Q Consensus 277 v---id~~g~ 283 (390)
| ++.+..
T Consensus 78 iT~E~EnI~~ 87 (111)
T d1kjqa2 78 IVPEIEAIAT 87 (111)
T ss_dssp EEECSSCSCH
T ss_pred EEEEecCcCH
Confidence 8 455553
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.03 E-value=0.012 Score=49.52 Aligned_cols=97 Identities=18% Similarity=0.192 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC----CcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
..+|.+||-+|+| .|..+..+++..+. +|++++.++.-++.+++.. ....+.. .+.......+..+.+|
T Consensus 51 ~~~g~~VLdIGcG-~G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~fD 123 (229)
T d1zx0a1 51 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK-----GLWEDVAPTLPDGHFD 123 (229)
T ss_dssp TTTCEEEEEECCT-TSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE-----SCHHHHGGGSCTTCEE
T ss_pred ccCCCeEEEeecc-chHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc-----cccccccccccccccc
Confidence 4688999999985 35667778876666 8999999999888887632 2111111 1333333344445899
Q ss_pred EEE-EcccChH----------HHHHHHHHhccCCceEEEE
Q 016363 276 YCF-ECIGLTS----------VMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 276 ~vi-d~~g~~~----------~~~~~~~~l~~~~G~~v~~ 304 (390)
.++ |.+.... .+..+.+.|+++ |+++..
T Consensus 124 ~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~ 162 (229)
T d1zx0a1 124 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC 162 (229)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred ceeecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence 985 6554321 356678899999 988754
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=95.02 E-value=0.03 Score=47.89 Aligned_cols=84 Identities=12% Similarity=0.241 Sum_probs=53.7
Q ss_pred CCCCCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhH-HHH-HhcCCcE-EEcCCCCCCc---CHHHHHHhh
Q 016363 199 GVEVGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKF-EIG-KKFGITD-FINPATCGDK---TVSQVIKEM 269 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~-~~~-~~~g~~~-v~~~~~~~~~---~~~~~i~~~ 269 (390)
++-+|+++||+|+ | ++|.+.++-+...|+ +|+.+.++.++. +.+ +.++... .+..+-.++. ++.+.+.+.
T Consensus 2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~ 80 (268)
T d2h7ma1 2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA 80 (268)
T ss_dssp CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhc
Confidence 3457899999995 4 599999999999999 999999887765 333 3455332 1211110111 233344443
Q ss_pred cCC--CccEEEEcccC
Q 016363 270 TDG--GADYCFECIGL 283 (390)
Q Consensus 270 ~~~--g~D~vid~~g~ 283 (390)
... ..|+++.+.|.
T Consensus 81 ~~~~~~ld~~i~~ag~ 96 (268)
T d2h7ma1 81 IGAGNKLDGVVHSIGF 96 (268)
T ss_dssp HCTTCCEEEEEECCCC
T ss_pred cccCCCcceeeecccc
Confidence 333 79999998873
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=94.89 E-value=0.13 Score=39.77 Aligned_cols=96 Identities=22% Similarity=0.313 Sum_probs=64.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEecCChh--h-HHHHHhcCCcEEEcCCCCCCcCH---------------
Q 016363 204 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPE--K-FEIGKKFGITDFINPATCGDKTV--------------- 262 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~--g~~~Vi~~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~~--------------- 262 (390)
.+|.|+|+ |.+|.-+.++.+.. .+ +|++++.+.. + .+.+++|.+..++-.++ ...
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~---~~~~~l~~~~~~~~~~v~ 78 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP---SLYNDLKEALAGSSVEAA 78 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG---GGHHHHHHHTTTCSSEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH---HHHHHHHHHhhhcccccc
Confidence 68999999 99999999999875 46 7777775543 2 34556788877764433 111
Q ss_pred --HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 263 --SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 263 --~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+.+.++....+|+|+.+..+...+.-.+..++.+ +-+.+.
T Consensus 79 ~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g--k~iaLA 121 (150)
T d1r0ka2 79 AGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG--KTVALA 121 (150)
T ss_dssp ESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT--SEEEEC
T ss_pred cCccchheecccccceeeeecCchhHHHHHHHHHhcC--CEEEEe
Confidence 11122222236899998877777788888888864 444453
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.86 E-value=0.041 Score=45.29 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=60.9
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
-++++++||=+|||. |..+..+++ .|. +|++++.+++-++.+++ .+.. ..+..+. .++ ...++.
T Consensus 34 ~l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~---~~l-----~~~~~~ 102 (226)
T d1ve3a1 34 YMKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA---RKL-----SFEDKT 102 (226)
T ss_dssp SCCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT---TSC-----CSCTTC
T ss_pred hcCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccc---ccc-----cccCcC
Confidence 367889999999864 666777776 477 99999999998877754 3322 2222211 111 112237
Q ss_pred ccEEEEcccCh--------HHHHHHHHHhccCCceEEEE
Q 016363 274 ADYCFECIGLT--------SVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 274 ~D~vid~~g~~--------~~~~~~~~~l~~~~G~~v~~ 304 (390)
+|+|+....-. ..+..+.+.|+++ |+++..
T Consensus 103 fD~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~ 140 (226)
T d1ve3a1 103 FDYVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY 140 (226)
T ss_dssp EEEEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ceEEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence 99998533311 1467788999999 988654
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=94.85 E-value=0.1 Score=40.73 Aligned_cols=93 Identities=15% Similarity=0.265 Sum_probs=56.6
Q ss_pred CEEEEEcCChHHH-HHHHHHHHcCCCeEEEec-CChh--hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEE
Q 016363 204 STVAIFGLGAVGL-AVAEGARLNRASKIIGVD-INPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 204 ~~VlI~Gag~vG~-~ai~la~~~g~~~Vi~~~-~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vi 278 (390)
-+|.|+|+|.+|. ..+++++....-+++++. ++++ +..+++++|..... +..+.+.+...- ++|+||
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--------~~~d~l~~~~~~~~iDiVf 76 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEGLIKLPEFADIDFVF 76 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHHHHHSGGGGGEEEEE
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--------cceeeeeecccccccCEEE
Confidence 4789999999987 567787765433777775 3433 35677778765432 223334333322 799999
Q ss_pred EcccChHHHHH--HHHHhccCCceEEEEc
Q 016363 279 ECIGLTSVMND--AFNSSREGWGKTVILG 305 (390)
Q Consensus 279 d~~g~~~~~~~--~~~~l~~~~G~~v~~g 305 (390)
.+++.....+. +.+.++.+ -.++...
T Consensus 77 ~ATpag~h~~~~~~~~aa~~G-~~VID~s 104 (157)
T d1nvmb1 77 DATSASAHVQNEALLRQAKPG-IRLIDLT 104 (157)
T ss_dssp ECSCHHHHHHHHHHHHHHCTT-CEEEECS
T ss_pred EcCCchhHHHhHHHHHHHHcC-CEEEEcc
Confidence 99886554543 34445544 4455443
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=94.67 E-value=0.013 Score=40.15 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=31.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
++|.|+|+|.+|++.++-++.+|. ++++.+.+++-.
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~p 37 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEPA 37 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCGG
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCCc
Confidence 479999999999999999999999 999999765543
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=94.66 E-value=0.061 Score=43.74 Aligned_cols=88 Identities=24% Similarity=0.269 Sum_probs=59.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...+++++..|+ +|++.++...... ....+.... .++.+.+++ .|+|.-++
T Consensus 48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~-~~~~~~~~~--------~~l~~ll~~-----sD~i~~~~ 112 (193)
T d1mx3a1 48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDGV-ERALGLQRV--------STLQDLLFH-----SDCVTLHC 112 (193)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTTH-HHHHTCEEC--------SSHHHHHHH-----CSEEEECC
T ss_pred eCceEEEeccccccccceeeeecccc-ceeeccCcccccc-hhhhccccc--------cchhhcccc-----CCEEEEee
Confidence 68899999999999999999999999 9999997654322 222332211 245444443 67887655
Q ss_pred cChH-----HHHHHHHHhccCCceEEEEc
Q 016363 282 GLTS-----VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~-----~~~~~~~~l~~~~G~~v~~g 305 (390)
+... .-...++.|+++ ..+|.++
T Consensus 113 plt~~T~~li~~~~l~~mk~~-a~lIN~s 140 (193)
T d1mx3a1 113 GLNEHNHHLINDFTVKQMRQG-AFLVNTA 140 (193)
T ss_dssp CCCTTCTTSBSHHHHTTSCTT-EEEEECS
T ss_pred cccccchhhhhHHHHhccCCC-CeEEecC
Confidence 5322 113567788877 7777665
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=94.62 E-value=0.015 Score=45.83 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=56.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc--EEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+|+|+|+|.+|.+.+..+...|. .|..+++++++.+.....+.+ ....... .+..+.+ +.+|++|-++.
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~D~iii~vk 72 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLT---ANDPDFL-----ATSDLLLVTLK 72 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEE---ESCHHHH-----HTCSEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccc---cchhhhh-----cccceEEEeec
Confidence 68999999999998888888999 999999988765544333221 1100000 1112222 26999999999
Q ss_pred ChHHHHHHHHHh----ccCCceEEEE
Q 016363 283 LTSVMNDAFNSS----REGWGKTVIL 304 (390)
Q Consensus 283 ~~~~~~~~~~~l----~~~~G~~v~~ 304 (390)
... .+.+++.+ .++ ..++.+
T Consensus 73 a~~-~~~~~~~l~~~~~~~-~~Iv~~ 96 (167)
T d1ks9a2 73 AWQ-VSDAVKSLASTLPVT-TPILLI 96 (167)
T ss_dssp GGG-HHHHHHHHHTTSCTT-SCEEEE
T ss_pred ccc-hHHHHHhhccccCcc-cEEeec
Confidence 765 55544444 334 455554
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.59 E-value=0.034 Score=46.60 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=66.6
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhc----CCcEEEcCCCCCCcCHHHHHHhhc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
+...++||++||=+|+| .|..+..+++..|. .+|++++.+++..+.+++. +....+..+. ...+... ..
T Consensus 67 ~~l~i~pG~~VLDlGaG-sG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~----~~~~~~~-~~ 140 (227)
T d1g8aa_ 67 KNFPIKPGKSVLYLGIA-SGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA----TKPEEYR-AL 140 (227)
T ss_dssp CCCCCCTTCEEEEETTT-STTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT----TCGGGGT-TT
T ss_pred cccccCCCCEEEEeccC-CCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC----CCccccc-cc
Confidence 45679999999999985 37777888888763 3899999999988877552 3222222222 1111111 11
Q ss_pred CCCccEEEEcccChH----HHHHHHHHhccCCceEEEE
Q 016363 271 DGGADYCFECIGLTS----VMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 271 ~~g~D~vid~~g~~~----~~~~~~~~l~~~~G~~v~~ 304 (390)
...+|+++..+.... .+..+.+.|+++ |+++.+
T Consensus 141 ~~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~ 177 (227)
T d1g8aa_ 141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA 177 (227)
T ss_dssp CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ccceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence 237898886554322 367778899998 887754
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.58 E-value=0.077 Score=43.02 Aligned_cols=89 Identities=17% Similarity=0.164 Sum_probs=60.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.++.|+|.|.+|...+++++..|. +|++.++...........+... . .++.+.+.+ .|+|.-++
T Consensus 46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~-----~~l~~ll~~-----sD~v~l~~ 111 (191)
T d1gdha1 46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H-----DSLDSLLSV-----SQFFSLNA 111 (191)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C-----SSHHHHHHH-----CSEEEECC
T ss_pred cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c-----CCHHHHHhh-----CCeEEecC
Confidence 37999999999999999999999999 9999987655443333322211 1 245444443 68887665
Q ss_pred cChH-----HHHHHHHHhccCCceEEEEc
Q 016363 282 GLTS-----VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~-----~~~~~~~~l~~~~G~~v~~g 305 (390)
+... .-...++.|+++ ..+|.++
T Consensus 112 plt~~T~~li~~~~l~~mk~~-a~lIN~s 139 (191)
T d1gdha1 112 PSTPETRYFFNKATIKSLPQG-AIVVNTA 139 (191)
T ss_dssp CCCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred CCCchHhheecHHHhhCcCCc-cEEEecC
Confidence 5322 114677788877 7777665
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.57 E-value=0.06 Score=45.69 Aligned_cols=78 Identities=9% Similarity=0.009 Sum_probs=48.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH-HH-HHh----cCCcEEEc-CCCCCCcCHHHHHHhh----c--
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF-EI-GKK----FGITDFIN-PATCGDKTVSQVIKEM----T-- 270 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~-~~-~~~----~g~~~v~~-~~~~~~~~~~~~i~~~----~-- 270 (390)
+.||+|+ +++|.+.++.+...|+ +|+.++++.++. +. .++ .+.+.... .....+.+..+.+.++ .
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 5688898 9999999999999999 999999886653 22 222 23333221 1111112222222221 1
Q ss_pred CCCccEEEEcccC
Q 016363 271 DGGADYCFECIGL 283 (390)
Q Consensus 271 ~~g~D~vid~~g~ 283 (390)
-|++|++++++|.
T Consensus 82 ~g~iDilvnnAG~ 94 (266)
T d1mxha_ 82 FGRCDVLVNNASA 94 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCcc
Confidence 1479999999884
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.57 E-value=0.033 Score=50.46 Aligned_cols=31 Identities=32% Similarity=0.332 Sum_probs=28.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
|.+|||+|+ |.+|..++..+...|. +|++++
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence 679999998 9999999999999999 999987
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.54 E-value=0.031 Score=49.31 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=29.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.++||+|+ |.+|...+..+...|+ +|+++++..
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~~ 35 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRRS 35 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECCC
Confidence 57999998 9999999999999999 999999753
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=94.48 E-value=0.047 Score=48.81 Aligned_cols=76 Identities=11% Similarity=0.072 Sum_probs=44.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-----hHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcCC-
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-----KFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-----~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~- 272 (390)
+.|||+|+ |.+|...+..+...|. +|+++++... +.+.+.. ......+...+ -.-.+.+.+...+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D---l~d~~~~~~~~~~~ 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD---LSDTSNLTRILREV 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCC---SSCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEee---cCCHHHHHHHHhcc
Confidence 57899998 9999999999999999 9999998543 2222211 11111111111 1113344444445
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|+|+.+++.
T Consensus 78 ~~d~v~h~aa~ 88 (357)
T d1db3a_ 78 QPDEVYNLGAM 88 (357)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEEeecc
Confidence 88999998764
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=94.43 E-value=0.098 Score=43.61 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
-.|.+|+|.|-|.+|..+++++...|+ +|++++.++.+.+.+.. .|... ++.++ +..-..|+.+=
T Consensus 37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~~-~~~~~------------~~~~~cDIl~P 102 (230)
T d1leha1 37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADA-VAPNA------------IYGVTCDIFAP 102 (230)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEE-CCGGG------------TTTCCCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCcc-cCCcc------------cccccccEecc
Confidence 468999999999999999999999999 99999999888876654 45432 22111 12226788875
Q ss_pred cccChHHHHHHHHHhc
Q 016363 280 CIGLTSVMNDAFNSSR 295 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~ 295 (390)
|.-+...-......|+
T Consensus 103 cA~~~~I~~~~~~~l~ 118 (230)
T d1leha1 103 CALGAVLNDFTIPQLK 118 (230)
T ss_dssp CSCSCCBSTTHHHHCC
T ss_pred cccccccChHHhhccC
Confidence 5554442334445554
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=94.33 E-value=0.12 Score=41.15 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=37.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
.+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.+
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~ 45 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANE 45 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTT
T ss_pred CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhc
Confidence 468999999999998888888899 9999999999998886654
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=94.28 E-value=0.17 Score=35.82 Aligned_cols=73 Identities=21% Similarity=0.222 Sum_probs=52.6
Q ss_pred CCCCCCEEEEEcCChHHHHH-HHHHHHcCCCeEEEecCChh-hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 199 GVEVGSTVAIFGLGAVGLAV-AEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~a-i~la~~~g~~~Vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.++..++|.++|.|++|+.+ +++++..|+ .|.+.|.... ..+.+++.|......++. .. + .++|+
T Consensus 4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~---~~----i-----~~~d~ 70 (96)
T d1p3da1 4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE---EH----I-----EGASV 70 (96)
T ss_dssp CCTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG---GG----G-----TTCSE
T ss_pred cchhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc---cc----C-----CCCCE
Confidence 35667899999999999887 899999999 9999997643 456667788865554433 11 1 25788
Q ss_pred EEEcccCh
Q 016363 277 CFECIGLT 284 (390)
Q Consensus 277 vid~~g~~ 284 (390)
|+-+.+-+
T Consensus 71 vV~S~AI~ 78 (96)
T d1p3da1 71 VVVSSAIK 78 (96)
T ss_dssp EEECTTSC
T ss_pred EEECCCcC
Confidence 88665543
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.27 E-value=0.48 Score=37.46 Aligned_cols=89 Identities=16% Similarity=0.212 Sum_probs=60.8
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEEe-cCChhhHHHH-HhcCCc---EEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 205 TVAIFGLGAVGLAVAEGARLN-RASKIIGV-DINPEKFEIG-KKFGIT---DFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~-~~~~~~~~~~-~~~g~~---~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
+|.|+|+|.+|...++.++.. +. +++++ ++++++.+.+ ++++.. .++ .++.+.+.+ ..+|+|+
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ll~~---~~iD~v~ 71 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH-------GSYESLLED---PEIDALY 71 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE-------SSHHHHHHC---TTCCEEE
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec-------CcHHHhhhc---cccceee
Confidence 588999999999888887766 56 77755 6677665544 445532 222 234444432 3799999
Q ss_pred EcccChHHHHHHHHHhccCCceEEEEcc
Q 016363 279 ECIGLTSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
-+++.....+.+..++.. |.=+.+.-
T Consensus 72 I~tp~~~h~~~~~~~l~~--g~~v~~EK 97 (184)
T d1ydwa1 72 VPLPTSLHVEWAIKAAEK--GKHILLEK 97 (184)
T ss_dssp ECCCGGGHHHHHHHHHTT--TCEEEECS
T ss_pred ecccchhhcchhhhhhhc--cceeeccc
Confidence 999988877888888885 56666653
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.26 E-value=0.096 Score=42.11 Aligned_cols=87 Identities=22% Similarity=0.277 Sum_probs=60.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.++.|+|.|.+|...+++++..|. +|++.++...+.... ..+... .++.+.+. ..|+|.-++
T Consensus 43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~~-~~~~~~---------~~l~ell~-----~sDiv~~~~ 106 (184)
T d1ygya1 43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARAA-QLGIEL---------LSLDDLLA-----RADFISVHL 106 (184)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHHH-HHTCEE---------CCHHHHHH-----HCSEEEECC
T ss_pred cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHHh-hcCcee---------ccHHHHHh-----hCCEEEEcC
Confidence 57899999999999999999999999 999999876554333 233211 23444444 378888766
Q ss_pred cChHH-----HHHHHHHhccCCceEEEEc
Q 016363 282 GLTSV-----MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~-----~~~~~~~l~~~~G~~v~~g 305 (390)
+.... -...++.|+++ ..+|.++
T Consensus 107 Plt~~T~~lin~~~l~~mk~~-a~lIN~s 134 (184)
T d1ygya1 107 PKTPETAGLIDKEALAKTKPG-VIIVNAA 134 (184)
T ss_dssp CCSTTTTTCBCHHHHTTSCTT-EEEEECS
T ss_pred CCCchhhhhhhHHHHhhhCCC-ceEEEec
Confidence 63221 14677788877 7777776
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=94.25 E-value=0.038 Score=49.09 Aligned_cols=77 Identities=12% Similarity=0.016 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHH-HHhc---CCcEEEcCCCCCCcCHHHHHHhhcCC-Ccc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKF---GITDFINPATCGDKTVSQVIKEMTDG-GAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~~---g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D 275 (390)
++.+|||+|+ |.+|...++.+...|. +|+++++++.+... ++.. ..-..+..+- .+ .+.+.+.... .+|
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl---~d-~~~l~~~~~~~~~~ 81 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDI---RD-QNKLLESIREFQPE 81 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCT---TC-HHHHHHHHHHHCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeec---cC-hHhhhhhhhhchhh
Confidence 5799999998 9999999999999999 99999987764322 2211 1112221111 11 2233333334 789
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+|+.+++.
T Consensus 82 ~v~~~aa~ 89 (356)
T d1rkxa_ 82 IVFHMAAQ 89 (356)
T ss_dssp EEEECCSC
T ss_pred hhhhhhcc
Confidence 99998875
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.25 E-value=0.018 Score=46.49 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=31.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
+++|+|+|+|+.|+.++..+...|++.|+++++++.
T Consensus 4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 678999999999999999999999855888887653
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.21 E-value=0.061 Score=39.87 Aligned_cols=43 Identities=14% Similarity=0.023 Sum_probs=37.3
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+.+.....++.+|+|+|+|.+|+-.+..++.+|. +|..+.+++
T Consensus 13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~ 55 (121)
T d1mo9a2 13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE 55 (121)
T ss_dssp HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence 3466677889999999999999999999999999 898888764
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.21 E-value=0.25 Score=39.53 Aligned_cols=39 Identities=28% Similarity=0.389 Sum_probs=34.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
.+|.|+|+|.+|...+.++...|+ +|+..+++++.++..
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~ 43 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG 43 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence 469999999999999988888999 999999999876654
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.20 E-value=0.022 Score=49.61 Aligned_cols=99 Identities=16% Similarity=0.075 Sum_probs=62.7
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CCc-----EEEcCCCCCCcCHHHHH
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT-----DFINPATCGDKTVSQVI 266 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~~-----~v~~~~~~~~~~~~~~i 266 (390)
...+.+++.+||=+|+| .|..++.|++. |+ +|++++.+++-++.+++. +.. ..+.. .++...-
T Consensus 50 ~~l~~~~~~~vLD~GcG-~G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 121 (292)
T d1xvaa_ 50 GLLRQHGCHRVLDVACG-TGVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE-----ANWLTLD 121 (292)
T ss_dssp HHHHHTTCCEEEESSCT-TSHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE-----CCGGGHH
T ss_pred HHhhhcCCCEEEEecCC-CcHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeee-----ccccccc
Confidence 44455677899988885 36667777765 88 999999999877776541 211 11111 1232222
Q ss_pred HhhcCC-CccEEEEcccC--------------hHHHHHHHHHhccCCceEEE
Q 016363 267 KEMTDG-GADYCFECIGL--------------TSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 267 ~~~~~~-g~D~vid~~g~--------------~~~~~~~~~~l~~~~G~~v~ 303 (390)
.+...+ .+|.|+..... ...+..+.+.|+++ |.++.
T Consensus 122 ~~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~ 172 (292)
T d1xvaa_ 122 KDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI 172 (292)
T ss_dssp HHSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred cccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence 333334 89999864321 11478889999999 98875
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.15 E-value=0.021 Score=47.87 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=46.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
+.+|||+|+ |.+|...++.+...|. .+|++++|++.+...-..-.....+ |..+ .+.+.+.. .++|+++.
T Consensus 14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~------~~~~~~~~-~~~d~vi~ 86 (232)
T d2bkaa1 14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK------LDDYASAF-QGHDVGFC 86 (232)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG------GGGGGGGG-SSCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc------cccccccc-cccccccc
Confidence 368999999 9999999998877774 4899999876543222111122222 2211 11222222 27999999
Q ss_pred cccCh
Q 016363 280 CIGLT 284 (390)
Q Consensus 280 ~~g~~ 284 (390)
++|..
T Consensus 87 ~~~~~ 91 (232)
T d2bkaa1 87 CLGTT 91 (232)
T ss_dssp CCCCC
T ss_pred ccccc
Confidence 98863
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=94.10 E-value=0.057 Score=47.71 Aligned_cols=75 Identities=15% Similarity=0.187 Sum_probs=47.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|||+|+ |.+|...++.+...|..+|+++++...+...+....--.++..+-.+..++.+.+.+ ++|+||.+++-
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~~ 77 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK----KCDVVLPLVAI 77 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH----HCSEEEECBCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh----CCCcccccccc
Confidence 6999998 999999998888888438999987766554443322112332221011233333322 69999998874
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=94.06 E-value=0.41 Score=36.68 Aligned_cols=78 Identities=8% Similarity=-0.055 Sum_probs=54.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhH-HHHH---hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-EIGK---KFGITDFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~---~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
+-+.|+|.|.|.+|...++.+...|. .|++++.++++. +.++ ..|...+. .+ ..-.+.+++..-+.+|.+
T Consensus 2 ~knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~-Gd----~~d~~~L~~a~i~~a~~v 75 (153)
T d1id1a_ 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GD----SNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SC----TTSHHHHHHHTTTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEE-cc----CcchHHHHHhccccCCEE
Confidence 34679999999999999999999999 888888887653 2332 23444433 22 233445555544489999
Q ss_pred EEcccChH
Q 016363 278 FECIGLTS 285 (390)
Q Consensus 278 id~~g~~~ 285 (390)
+-+++...
T Consensus 76 i~~~~~d~ 83 (153)
T d1id1a_ 76 LALSDNDA 83 (153)
T ss_dssp EECSSCHH
T ss_pred EEccccHH
Confidence 99988765
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=94.04 E-value=0.33 Score=41.70 Aligned_cols=108 Identities=17% Similarity=0.135 Sum_probs=67.5
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC---ChhhHHHHHhcCCcEEEcCCCC---------------
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFINPATC--------------- 257 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~~g~~~v~~~~~~--------------- 257 (390)
+...+.++.+|+...+|..|++++..++.+|. +++++.. ++.|.+.++.+|++.++...+.
T Consensus 53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~-~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~ 131 (292)
T d2bhsa1 53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGY-RMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR 131 (292)
T ss_dssp HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred HhCCcCCCceeeeecccchhHHHHHHHHhcCc-ceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence 44556677776666789999999999999998 4444443 5567888899998755432220
Q ss_pred ---------CCc--------CHHHHHHhhcCCCccEEEEcccChHHHHHHH---HHhccCCceEEEEc
Q 016363 258 ---------GDK--------TVSQVIKEMTDGGADYCFECIGLTSVMNDAF---NSSREGWGKTVILG 305 (390)
Q Consensus 258 ---------~~~--------~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~---~~l~~~~G~~v~~g 305 (390)
.+. ....+|.+..++.+|+++-++|+...+.-.. +.+.+. .+++.+-
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~Ve 198 (292)
T d2bhsa1 132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGLQ 198 (292)
T ss_dssp TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEEE
T ss_pred ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEec
Confidence 000 0122233334446999999888766454444 444445 6665554
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.98 E-value=0.031 Score=47.71 Aligned_cols=32 Identities=19% Similarity=0.394 Sum_probs=28.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+|||+|+ |.+|...+..++..|. +|+++++++
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~ 35 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD 35 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence 6999998 9999999999999999 999998753
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=93.91 E-value=0.084 Score=42.61 Aligned_cols=89 Identities=16% Similarity=0.100 Sum_probs=59.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+.+|.|+|.|.+|...+++++..|. +|++.++...........+.... .++.+.+. ..|+|.-+.
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~--------~~l~~~l~-----~sD~v~~~~ 108 (188)
T d2naca1 43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATREDMYP-----VCDVVTLNC 108 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHGG-----GCSEEEECS
T ss_pred cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc--------CCHHHHHH-----hccchhhcc
Confidence 57899999999999999999999999 99999987655555544443211 12333322 467776655
Q ss_pred cChH-----HHHHHHHHhccCCceEEEEc
Q 016363 282 GLTS-----VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~-----~~~~~~~~l~~~~G~~v~~g 305 (390)
+-.. .-...++.|+++ ..+|.++
T Consensus 109 plt~~T~~li~~~~l~~mk~g-a~lIN~a 136 (188)
T d2naca1 109 PLHPETEHMINDETLKLFKRG-AYIVNTA 136 (188)
T ss_dssp CCCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred cccccchhhhHHHHHHhCCCC-CEEEecC
Confidence 5322 124566777766 6666665
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.88 E-value=0.1 Score=40.21 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=30.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
.|.+|||+|+|.+|..-+..+...|+ +|++++.
T Consensus 12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap 44 (150)
T d1kyqa1 12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP 44 (150)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 58899999999999999999999999 8888864
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.86 E-value=0.034 Score=46.96 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
..++|+|+|+|+.|++++..+...|. +|+++++++
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP 37 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 46789999999999999999999999 999999754
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=93.86 E-value=0.66 Score=35.33 Aligned_cols=94 Identities=12% Similarity=0.006 Sum_probs=62.2
Q ss_pred CEEEEEc-CChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC--CccEEEEc
Q 016363 204 STVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG--GADYCFEC 280 (390)
Q Consensus 204 ~~VlI~G-ag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~vid~ 280 (390)
.+|.|+| .|.+|...+..++..|+ .|.+.++++........-+++.++.... .....+.+.+..+. .=.+++|+
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~v~~~~~~~~~~~~iiiD~ 86 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP--INLTLETIERLKPYLTENMLLADL 86 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc--hhhheeeeecccccccCCceEEEe
Confidence 5899999 59999999999999999 9999999887766665566766654433 12344444444433 23477788
Q ss_pred ccChHHHHHHHHHhccCCceEE
Q 016363 281 IGLTSVMNDAFNSSREGWGKTV 302 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v 302 (390)
++........+....+ .+++
T Consensus 87 ~Svk~~~~~~~~~~~~--~~~v 106 (152)
T d2pv7a2 87 TSVKREPLAKMLEVHT--GAVL 106 (152)
T ss_dssp CSCCHHHHHHHHHHCS--SEEE
T ss_pred cccCHHHHHHHHHHcc--CCEE
Confidence 8765544444443332 4544
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.84 E-value=0.26 Score=37.97 Aligned_cols=98 Identities=18% Similarity=0.263 Sum_probs=64.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEecCChh--h-HHHHHhcCCcEEEcCCCCCCcCH----------------
Q 016363 205 TVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPE--K-FEIGKKFGITDFINPATCGDKTV---------------- 262 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~--g~~~Vi~~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~~---------------- 262 (390)
+|.|+|+ |.+|..++.+.+.. .+ +|++++.+.. . .+++.+|.+..++-.++.....+
T Consensus 3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g 81 (151)
T d1q0qa2 3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG 81 (151)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence 6899999 99999999999876 35 7777764433 2 23446688887765433000001
Q ss_pred HHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 263 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 263 ~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+.+.++... ++|+|+.+..+-..+.-.+..++. |+-+.+.
T Consensus 82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~--gk~iaLA 123 (151)
T d1q0qa2 82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRA--GKTILLA 123 (151)
T ss_dssp HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHT--TCEEEEC
T ss_pred hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhc--CCeEEEE
Confidence 1223333333 789999888888878888888886 4555554
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.80 E-value=0.14 Score=41.98 Aligned_cols=102 Identities=16% Similarity=0.072 Sum_probs=64.0
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
....++||++||=+|+|. |..+..++...+..+|++++.+++.++.+++ .+....+..+. .+. ... ....
T Consensus 50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~---~~~-~~~-~~~~ 123 (209)
T d1nt2a_ 50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDA---SKP-WKY-SGIV 123 (209)
T ss_dssp CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCT---TCG-GGT-TTTC
T ss_pred ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeec---cCc-ccc-cccc
Confidence 346799999999999853 4567777777765599999999988876643 33222332222 110 000 0111
Q ss_pred CCccEEEEcccChH----HHHHHHHHhccCCceEEEE
Q 016363 272 GGADYCFECIGLTS----VMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 272 ~g~D~vid~~g~~~----~~~~~~~~l~~~~G~~v~~ 304 (390)
..+|+++....... .+..+.+.|+++ |.++.+
T Consensus 124 ~~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 159 (209)
T d1nt2a_ 124 EKVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM 159 (209)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ceEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEE
Confidence 26778876544322 356677899998 888755
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.68 E-value=0.082 Score=39.42 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=36.1
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+.+...-.++.+|+|+|+|.+|+-+++.+..+|. +|..+.+.+
T Consensus 21 i~~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~ 63 (123)
T d1nhpa2 21 LKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD 63 (123)
T ss_dssp HHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred HHHHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence 4455556678899999999999999999999999 899987653
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=93.65 E-value=0.15 Score=39.28 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=52.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|.|.+|...+.-+...|. .|++..+.+.+....+..+....- +..+.++ ..|+||-|+...
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~--------~~~e~~~-----~~diIi~~v~~~ 67 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERARTVGVTE--------TSEEDVY-----SCPVVISAVTPG 67 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHHHHTCEE--------CCHHHHH-----TSSEEEECSCGG
T ss_pred EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhhcccccc--------cHHHHHh-----hcCeEEEEecCc
Confidence 58899999999999999998998 899888777666555433322211 1112221 467777777766
Q ss_pred HHHHHHHHHhccCCceEEEE
Q 016363 285 SVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 285 ~~~~~~~~~l~~~~G~~v~~ 304 (390)
...+.+.......+..++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~id~ 87 (152)
T d1i36a2 68 VALGAARRAGRHVRGIYVDI 87 (152)
T ss_dssp GHHHHHHHHHTTCCSEEEEC
T ss_pred hHHHHHHhhcccCCceeecc
Confidence 54444433333331334444
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.63 E-value=0.092 Score=45.93 Aligned_cols=44 Identities=23% Similarity=0.277 Sum_probs=31.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
+.+...+.+|++||-+|+| .|..++.+|+ .|+++|++++.++.-
T Consensus 27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~ 70 (311)
T d2fyta1 27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEIL 70 (311)
T ss_dssp HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHH
T ss_pred HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHH
Confidence 3344567789999999986 5555555555 577799999988754
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=93.52 E-value=1.3 Score=34.73 Aligned_cols=136 Identities=12% Similarity=0.032 Sum_probs=78.0
Q ss_pred EEEEEcCChHHHH-HHHHHHHcCCC-eEEE-ecCChhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 205 TVAIFGLGAVGLA-VAEGARLNRAS-KIIG-VDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 205 ~VlI~Gag~vG~~-ai~la~~~g~~-~Vi~-~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
+|.|+|+|.+|.- .+...+...-. ++++ .++++++.+.+ +.++...+.+ ++.+.+. ...+|+|+-|
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-------~~~ell~---~~~id~v~I~ 74 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-------SYEELLE---SGLVDAVDLT 74 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-------CHHHHHH---SSCCSEEEEC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-------eeecccc---ccccceeecc
Confidence 6889999999964 56666655422 5664 46667766554 4577655542 4544443 2379999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccCCCCCcccc-hHhhhc--ceeEEeeecCCC-CchhhHHHHHHHHHcCCC
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEILK--GRSVCGTYFGGL-KPRSDIATLAQKYLDKEL 352 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~--~~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~ 352 (390)
+......+.+..++.. |+=+.+.-+.....-... ...+.+ +..+.-.....+ .....+.++.+++++|++
T Consensus 75 tp~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i 148 (181)
T d1zh8a1 75 LPVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP 148 (181)
T ss_dssp CCGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred cccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence 9887756777777775 566666533221111100 111222 333322211111 123567788899999865
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.50 E-value=0.58 Score=41.43 Aligned_cols=108 Identities=18% Similarity=0.263 Sum_probs=69.4
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec---CChhhHHHHHhcCCcEEEcCCCCC--------------
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD---INPEKFEIGKKFGITDFINPATCG-------------- 258 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~---~~~~~~~~~~~~g~~~v~~~~~~~-------------- 258 (390)
+...++++..|+...+|..|.+.+..|+.+|. +.+++. .+++|.+.++.+|++.+.......
T Consensus 90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi-~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~ 168 (355)
T d1jbqa_ 90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGY-RCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL 168 (355)
T ss_dssp HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTC-EEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred HcCCcccCceEEEecccchhhHHHHHHHhccC-CeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence 44556777777777789999999999999999 444444 335688899999997654221100
Q ss_pred --------------C--------cCHHHHHHhhcCCCccEEEEcccChHHHH---HHHHHhccCCceEEEEc
Q 016363 259 --------------D--------KTVSQVIKEMTDGGADYCFECIGLTSVMN---DAFNSSREGWGKTVILG 305 (390)
Q Consensus 259 --------------~--------~~~~~~i~~~~~~g~D~vid~~g~~~~~~---~~~~~l~~~~G~~v~~g 305 (390)
+ .+...++.+..++.+|.|+-++|+...+. ..++...+. -+++.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~ve 239 (355)
T d1jbqa_ 169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVD 239 (355)
T ss_dssp HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeec
Confidence 0 01222333333447899999999766444 344455555 6776554
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.50 E-value=0.087 Score=44.92 Aligned_cols=95 Identities=14% Similarity=0.137 Sum_probs=59.7
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHHhhc
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~~~~ 270 (390)
..+++|++||-.||| +|..++.+|+. |..+|++++.+++..+.+++ .+.+ .++..+. . ++.
T Consensus 103 ~~~~~g~~VlD~~aG-~G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~---~-------~~~ 170 (260)
T d2frna1 103 KVAKPDELVVDMFAG-IGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---R-------DFP 170 (260)
T ss_dssp HHCCTTCEEEETTCT-TTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---T-------TCC
T ss_pred hhcCCccEEEECcce-EcHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch---H-------Hhc
Confidence 347899999998763 23334455555 43499999999998888754 2332 3343322 1 223
Q ss_pred CC-CccEEEE-c-ccChHHHHHHHHHhccCCceEEEEc
Q 016363 271 DG-GADYCFE-C-IGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 271 ~~-g~D~vid-~-~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.. .+|.|+- . -.....+..+++.++++ |.+....
T Consensus 171 ~~~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~ 207 (260)
T d2frna1 171 GENIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHN 207 (260)
T ss_dssp CCSCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred cCCCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEe
Confidence 33 7997763 2 22334477899999988 8875544
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.44 E-value=0.035 Score=47.52 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=30.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+++|+|+|+|+.|++|+..+...|. +|.+++.++
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 5789999999999999999999999 999998654
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=93.42 E-value=0.33 Score=33.77 Aligned_cols=68 Identities=19% Similarity=0.330 Sum_probs=48.8
Q ss_pred CEEEEEcCChHHHHH-HHHHHHcCCCeEEEecCCh-hhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGLGAVGLAV-AEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Gag~vG~~a-i~la~~~g~~~Vi~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+|-++|.|++|+.+ +++++..|+ .|.+.|..+ +..+.+++.|......++. ..+ .++|+|+-+.
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~---~~i---------~~~d~vV~Ss 68 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA---DNW---------YDPDLVIKTP 68 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT---TSC---------CCCSEEEECT
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc---ccc---------CCCCEEEEec
Confidence 357778999999865 688999999 999999886 3456788899865444332 221 2688888666
Q ss_pred cCh
Q 016363 282 GLT 284 (390)
Q Consensus 282 g~~ 284 (390)
.-+
T Consensus 69 AI~ 71 (89)
T d1j6ua1 69 AVR 71 (89)
T ss_dssp TCC
T ss_pred CcC
Confidence 543
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=93.38 E-value=0.23 Score=38.81 Aligned_cols=132 Identities=12% Similarity=0.067 Sum_probs=76.8
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 205 TVAIFGLGAVGLA-VAEGARLN-RASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 205 ~VlI~Gag~vG~~-ai~la~~~-g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+|.|+|+|.+|.. .+...+.. +. .++++++++++.+.+. .++...++. ++.+.+ ...+|+|+-|+
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~-------~~~~ll----~~~iD~V~I~t 70 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCT-------DYRDVL----QYGVDAVMIHA 70 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCS-------STTGGG----GGCCSEEEECS
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccc-------cHHHhc----ccccceecccc
Confidence 5889999999964 56666555 45 7788888888876664 466544332 222222 12699999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccCCCCCcc-cchHhhhc--ceeEEeeecCCCCchhhHHHHHHHHHcCCCC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN 353 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (390)
+.....+.+..++.. |+=+++.-+.....-. .......+ +..+.-.+ .+....+.++++.+..|++.
T Consensus 71 p~~~H~~~~~~al~~--gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~---~r~~~~~~~~~~~~~~G~ig 140 (167)
T d1xeaa1 71 ATDVHSTLAAFFLHL--GIPTFVDKPLAASAQECENLYELAEKHHQPLYVGF---NGFDAMVQDWLQVAAAGKLP 140 (167)
T ss_dssp CGGGHHHHHHHHHHT--TCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC---GTHHHHHHHHHHHHHHTCCC
T ss_pred ccccccccccccccc--ccccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe---CcCCHHHHHHHHHhhcCCCC
Confidence 988867788888886 4555665332111000 00111222 33332221 12345567777888888654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=93.34 E-value=0.15 Score=45.01 Aligned_cols=38 Identities=16% Similarity=0.140 Sum_probs=33.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
+.++|||+|+ |.+|...+..+...|. +|++++|++++.
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~ 40 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGL 40 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSH
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchh
Confidence 5679999998 9999999999999999 999999987654
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.32 E-value=0.1 Score=43.52 Aligned_cols=100 Identities=16% Similarity=0.151 Sum_probs=62.8
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
+...++||++||=+||| .|..+..+|......+|++++.+++-++.+++. +....+..+. ... . ....
T Consensus 68 ~~l~ikpG~~VLDlGcG-sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~---~~~-~---~~~~ 139 (230)
T d1g8sa_ 68 KVMPIKRDSKILYLGAS-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKP-Q---EYAN 139 (230)
T ss_dssp CCCCCCTTCEEEEESCC-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCG-G---GGTT
T ss_pred HhCCCCCCCEEEEeCEE-cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEee---ccC-c---cccc
Confidence 45678999999999985 366667777765434899999999988877653 2222232222 111 1 1111
Q ss_pred C--CccEEEEcccChH----HHHHHHHHhccCCceEEEE
Q 016363 272 G--GADYCFECIGLTS----VMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 272 ~--g~D~vid~~g~~~----~~~~~~~~l~~~~G~~v~~ 304 (390)
. .+|+++....... .+..+.+.|+++ |.++..
T Consensus 140 ~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~ 177 (230)
T d1g8sa_ 140 IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA 177 (230)
T ss_dssp TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ccceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence 2 5666666554322 356777889998 887654
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=93.32 E-value=0.031 Score=43.46 Aligned_cols=85 Identities=8% Similarity=-0.124 Sum_probs=53.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 285 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~ 285 (390)
|-++|+|.+|.+.++.++..+. .+.+..|++++.+.+.+.+.....+..+ . -...|+||-|+....
T Consensus 2 IgfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~------------~-~~~~DiVil~v~d~~ 67 (153)
T d2i76a2 2 LNFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEK------------H-PELNGVVFVIVPDRY 67 (153)
T ss_dssp CEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC------------C-CC---CEEECSCTTT
T ss_pred EEEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhh------------h-hccCcEEEEeccchh
Confidence 4578999999998876655333 4457889999998887765433322211 0 125899999998776
Q ss_pred HHHHHHHHhccCCceEEEEc
Q 016363 286 VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 286 ~~~~~~~~l~~~~G~~v~~g 305 (390)
+....+.|+..+..++.++
T Consensus 68 -i~~v~~~l~~~~~ivi~~s 86 (153)
T d2i76a2 68 -IKTVANHLNLGDAVLVHCS 86 (153)
T ss_dssp -HHHHHTTTCCSSCCEEECC
T ss_pred -hhHHHhhhcccceeeeecc
Confidence 7888888875513444443
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=93.30 E-value=0.057 Score=47.74 Aligned_cols=73 Identities=18% Similarity=0.226 Sum_probs=45.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC----hhhHHHHHhc---CCcEEEcCCCCCCcCHHHHHHhhcCC-Ccc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN----PEKFEIGKKF---GITDFINPATCGDKTVSQVIKEMTDG-GAD 275 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~----~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D 275 (390)
+|||+|+ |.+|...+..+...|. +|+++++. .......+.+ ... ++..+- .+. +.+.+.... ++|
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl---~d~-~~l~~~~~~~~~d 75 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDI---RNE-ALMTEILHDHAID 75 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCT---TCH-HHHHHHHHHTTCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCE-EEEeec---CCH-HHHHHHHhccCCC
Confidence 5999998 9999999999999998 99998752 2222333222 222 222221 121 233333333 799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+||.+++.
T Consensus 76 ~ViHlAa~ 83 (338)
T d1udca_ 76 TVIHFAGL 83 (338)
T ss_dssp EEEECCSC
T ss_pred EEEECCCc
Confidence 99998753
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=93.21 E-value=0.11 Score=41.97 Aligned_cols=85 Identities=18% Similarity=0.162 Sum_probs=56.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC------cEEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI------TDFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+|.|+|+|..|.+.+.++...|. +|...+++++..+.+.+-+. ...+..+-.-..++.+.+. +.|+|
T Consensus 8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~i 81 (189)
T d1n1ea2 8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEII 81 (189)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCE
T ss_pred ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC-----CCCEE
Confidence 369999999999999998888887 89999999998887754321 1111000000123444442 58999
Q ss_pred EEcccChHHHHHHHHHhc
Q 016363 278 FECIGLTSVMNDAFNSSR 295 (390)
Q Consensus 278 id~~g~~~~~~~~~~~l~ 295 (390)
|-+++... +...++.+.
T Consensus 82 iiavPs~~-~~~~~~~~~ 98 (189)
T d1n1ea2 82 LFVIPTQF-LRGFFEKSG 98 (189)
T ss_dssp EECSCHHH-HHHHHHHHC
T ss_pred EEcCcHHH-HHHHHHHHH
Confidence 99999765 666655443
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.19 E-value=0.47 Score=35.75 Aligned_cols=29 Identities=17% Similarity=0.313 Sum_probs=21.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHH-cCCCeEEEec
Q 016363 205 TVAIFGL-GAVGLAVAEGARL-NRASKIIGVD 234 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~-~g~~~Vi~~~ 234 (390)
+|.|.|+ |-+|.+.++.... -+. ++++..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~ 31 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAEL 31 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEE
Confidence 5889998 9999998887664 456 665544
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.13 E-value=0.11 Score=46.18 Aligned_cols=75 Identities=15% Similarity=0.196 Sum_probs=47.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.++.+|||+|+ |.+|...+..+...|. +|+++++.+.+... .......+...+- .+..+ +.+.. .++|.|+.
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~-~~~~~~~~~~~D~---~~~~~-~~~~~-~~~d~Vih 85 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMT-EDMFCDEFHLVDL---RVMEN-CLKVT-EGVDHVFN 85 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSC-GGGTCSEEEECCT---TSHHH-HHHHH-TTCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccchh-hhcccCcEEEeec---hhHHH-HHHHh-hcCCeEee
Confidence 35779999998 9999999999999999 99999765433211 1122222222221 22323 22322 37999998
Q ss_pred ccc
Q 016363 280 CIG 282 (390)
Q Consensus 280 ~~g 282 (390)
+++
T Consensus 86 ~a~ 88 (363)
T d2c5aa1 86 LAA 88 (363)
T ss_dssp CCC
T ss_pred ccc
Confidence 774
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.09 E-value=0.12 Score=41.18 Aligned_cols=50 Identities=26% Similarity=0.191 Sum_probs=37.8
Q ss_pred HHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 193 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 193 ~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
+|.+...--+|++|||+|+|+++.+++..+... .+|+++.|+.+|.+.+.
T Consensus 8 ~l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~--~~i~I~nR~~~ka~~l~ 57 (177)
T d1nvta1 8 ALEEEIGRVKDKNIVIYGAGGAARAVAFELAKD--NNIIIANRTVEKAEALA 57 (177)
T ss_dssp HHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSS--SEEEEECSSHHHHHHHH
T ss_pred HHHHhCCCcCCCEEEEECCcHHHHHHHHHHccc--cceeeehhhhhHHHHHH
Confidence 343444446889999999999999887666443 48999999999877653
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=93.09 E-value=0.081 Score=44.60 Aligned_cols=34 Identities=26% Similarity=0.335 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
...+|+|+|+|++|..++..+...|..+++.+|.
T Consensus 29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~ 62 (247)
T d1jw9b_ 29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF 62 (247)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 3479999999999999999999999999999883
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.06 E-value=0.087 Score=42.70 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=34.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
++|.|+|+|.+|...++++...|+ +|+..+++++.++.+
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a 43 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS 43 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence 579999999999999999999999 999999999876544
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.00 E-value=0.087 Score=38.94 Aligned_cols=40 Identities=8% Similarity=0.062 Sum_probs=34.4
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
...++..++|+|+|+|.+|.-+++.++.+|. +|..+.+++
T Consensus 16 ~~~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~ 55 (117)
T d1onfa2 16 FFNIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN 55 (117)
T ss_dssp HTTCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred HhccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence 3455667899999999999999999999999 999998753
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=92.94 E-value=0.12 Score=41.69 Aligned_cols=96 Identities=19% Similarity=0.279 Sum_probs=60.1
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEE-EcCCCCCCcCHHHHHHhhc-C
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDF-INPATCGDKTVSQVIKEMT-D 271 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v-~~~~~~~~~~~~~~i~~~~-~ 271 (390)
+...++.+||=+|+| .|..+..+++ .|+ +|++++.+++-++.+++ .+.+.+ +...+ + .++. .
T Consensus 26 ~~~~~~grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d-----~----~~~~~~ 93 (198)
T d2i6ga1 26 AKVVAPGRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVD-----L----NTLTFD 93 (198)
T ss_dssp HTTSCSCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC-----T----TTCCCC
T ss_pred cccCCCCcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhhee-----c----cccccc
Confidence 343334489999996 7777777775 588 99999999988876643 344321 11111 0 0111 2
Q ss_pred CCccEEEEccc-----Ch---HHHHHHHHHhccCCceEEEEcc
Q 016363 272 GGADYCFECIG-----LT---SVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 272 ~g~D~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+.||+|+...- .. ..++.+.+.|+++ |.++....
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 135 (198)
T d2i6ga1 94 GEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA 135 (198)
T ss_dssp CCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred ccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 37999985332 11 2466777889998 98887653
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.90 E-value=0.13 Score=45.32 Aligned_cols=73 Identities=14% Similarity=0.077 Sum_probs=44.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh----hhHHHHHh---cCCcEEE-cCCCCCCcCHHHHHHhhcCC-C
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIGKK---FGITDFI-NPATCGDKTVSQVIKEMTDG-G 273 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~----~~~~~~~~---~g~~~v~-~~~~~~~~~~~~~i~~~~~~-g 273 (390)
+.|||+|+ |.+|...+..+...|. +|+++++.. +....... -+.+.+. |-.+ .+.+.++... +
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d------~~~l~~~~~~~~ 74 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD------RKGLEKVFKEYK 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTC------HHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCC------HHHHHHHHhccC
Confidence 47999998 9999999998888898 899986422 12222222 2232222 2111 2233333333 8
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+||.+.+.
T Consensus 75 ~d~VihlAa~ 84 (347)
T d1z45a2 75 IDSVIHFAGL 84 (347)
T ss_dssp CCEEEECCSC
T ss_pred CCEEEEcccc
Confidence 9999998764
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.83 E-value=0.015 Score=51.20 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=27.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
++|||+|+ |.+|...+..+...|. +|+++++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~ 33 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 57999998 9999999998888999 9999875
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=92.81 E-value=0.27 Score=41.92 Aligned_cols=36 Identities=17% Similarity=0.020 Sum_probs=30.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
+-.+|||+|+ |.+|...+..+...|. +|++++|++.
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~ 38 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEV 38 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCc
Confidence 3467999998 9999999998888998 8999998653
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.80 E-value=0.093 Score=46.07 Aligned_cols=94 Identities=19% Similarity=0.194 Sum_probs=53.2
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHH---HHHhcCC-c--EEEcCCCCCCcCHHHHHHhhcC
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE---IGKKFGI-T--DFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~---~~~~~g~-~--~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
..+.+|++||-+|+|. |..++.+|+ .|+++|++++.++.-.. .++.-+. + .++..+. .++ ....
T Consensus 29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~---~~~-----~~~~ 98 (316)
T d1oria_ 29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV---EEV-----ELPV 98 (316)
T ss_dssp HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT---TTC-----CCSS
T ss_pred cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH---HHc-----cccc
Confidence 3466899999999864 666555555 68778999998764221 2222232 1 2332222 111 1112
Q ss_pred CCccEEEE-cccC--------hHHHHHHHHHhccCCceEE
Q 016363 272 GGADYCFE-CIGL--------TSVMNDAFNSSREGWGKTV 302 (390)
Q Consensus 272 ~g~D~vid-~~g~--------~~~~~~~~~~l~~~~G~~v 302 (390)
+.+|+|+. ..+. ...+...-+.|+++ |+++
T Consensus 99 ~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii 137 (316)
T d1oria_ 99 EKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF 137 (316)
T ss_dssp SCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred ceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence 37999974 2321 11234456799998 8875
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=92.67 E-value=0.05 Score=45.49 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=32.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
++++||+|+ +++|.+.++.+...|+ +|+.+++++++.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~ 38 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE 38 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc
Confidence 467899998 9999999999999999 999999887643
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=92.62 E-value=0.1 Score=38.83 Aligned_cols=40 Identities=33% Similarity=0.477 Sum_probs=34.6
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
..++++++|+|+|+|.+|.-++..++..|. +|..+.+++.
T Consensus 25 ~~~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~ 64 (121)
T d1d7ya2 25 AGLRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR 64 (121)
T ss_dssp HHCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred HhhhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence 345678999999999999999999999999 9999987653
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.60 E-value=0.084 Score=38.86 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
..++++|+|+|.+|+-+++.+..+|. +|..+.+.+
T Consensus 21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~ 55 (117)
T d1ebda2 21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG 55 (117)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred cCCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence 34789999999999999999999999 899988664
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=92.46 E-value=0.34 Score=36.23 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=23.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEe
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 233 (390)
+|.|+|+ |-+|++..+++...+. ++++.
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~-~l~~~ 30 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGH-ELVLK 30 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCC-eEEEE
Confidence 5899998 9999999999998888 55543
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=92.43 E-value=0.19 Score=41.44 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=60.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHH---cCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARL---NRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~---~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
++++.+||=+|+| .|..+..+++. -++ +|++++.|++-++.+++ .+....+.... .+. .+...+
T Consensus 37 ~~~~~~vLDlGCG-tG~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~---~d~----~~~~~~ 107 (225)
T d1im8a_ 37 VTADSNVYDLGCS-RGAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILC---NDI----RHVEIK 107 (225)
T ss_dssp CCTTCEEEEESCT-TCHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEEC---SCT----TTCCCC
T ss_pred cCCCCEEEEeccc-hhhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhcc---chh----hccccc
Confidence 7899999999984 35555556654 467 99999999998887764 23221111101 111 122223
Q ss_pred CccEEEEcccC--------hHHHHHHHHHhccCCceEEEEc
Q 016363 273 GADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 273 g~D~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+|+++-+..- ...++.+.+.|+++ |.++..-
T Consensus 108 ~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~ 147 (225)
T d1im8a_ 108 NASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE 147 (225)
T ss_dssp SEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence 67777654331 12478899999999 9988653
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.27 E-value=0.17 Score=44.59 Aligned_cols=96 Identities=23% Similarity=0.290 Sum_probs=61.3
Q ss_pred CCCCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHHhh
Q 016363 199 GVEVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 199 ~~~~g~~VlI~Ga--g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~~~ 269 (390)
.+++|++||=.++ |..+. .+|+ .|+.+|++++.+++..+.+++ .|.. +++. .+..+.+..+
T Consensus 142 ~~~~g~~VLDl~~g~G~~si---~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~------~d~~~~~~~~ 211 (324)
T d2as0a2 142 WVQPGDRVLDVFTYTGGFAI---HAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV------GSAFEEMEKL 211 (324)
T ss_dssp GCCTTCEEEETTCTTTHHHH---HHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHHHH
T ss_pred hcCCCCeeecccCcccchhh---hhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee------chhhhhhHHH
Confidence 3688999988866 44444 3333 477699999999998888754 3442 2222 2444555444
Q ss_pred c-CC-CccEEEEcccC---------------hHHHHHHHHHhccCCceEEEEc
Q 016363 270 T-DG-GADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~-~~-g~D~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
. .+ .||+|+--.+. ...+..+++.|+++ |.++.+.
T Consensus 212 ~~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s 263 (324)
T d2as0a2 212 QKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCS 263 (324)
T ss_dssp HHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred HhccCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEe
Confidence 3 23 89999842221 11356677899998 9988775
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.27 E-value=0.096 Score=41.68 Aligned_cols=39 Identities=26% Similarity=0.230 Sum_probs=34.1
Q ss_pred EEEEE-cCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 205 TVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 205 ~VlI~-Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
+|.|+ |+|.+|.+.++.+...|+ +|+..+|++++.+.+.
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l~ 41 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKA 41 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence 57888 559999999999999999 9999999999876653
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.26 E-value=0.084 Score=43.99 Aligned_cols=38 Identities=18% Similarity=0.131 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
.+.+++|+|+|+|+.|+.++..++..|. +|..+..+++
T Consensus 46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~ 83 (233)
T d1djqa3 46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK 83 (233)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence 4577899999999999999999999999 8999986653
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=92.24 E-value=0.13 Score=43.06 Aligned_cols=90 Identities=14% Similarity=0.181 Sum_probs=57.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhc-CCC
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT-DGG 273 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~-~~g 273 (390)
..++++||=+|+| .|..+..+++ .|. +|++++.|++-++.+++ .+.. .++. . ++ .++. .+.
T Consensus 35 ~~~~~~vLDiGCG-~G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~-~-----d~----~~~~~~~~ 101 (246)
T d1y8ca_ 35 NLVFDDYLDLACG-TGNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLAC-Q-----DI----SNLNINRK 101 (246)
T ss_dssp TCCTTEEEEETCT-TSTTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEEC-C-----CG----GGCCCSCC
T ss_pred CCCCCeEEEEeCc-CCHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeec-c-----ch----hhhccccc
Confidence 3456789999986 4556666655 577 99999999987776644 3433 2332 1 22 2222 338
Q ss_pred ccEEEEcccC------h----HHHHHHHHHhccCCceEEE
Q 016363 274 ADYCFECIGL------T----SVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 274 ~D~vid~~g~------~----~~~~~~~~~l~~~~G~~v~ 303 (390)
+|+|+...+. . ..++.+.+.|+++ |.++.
T Consensus 102 fD~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~ 140 (246)
T d1y8ca_ 102 FDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF 140 (246)
T ss_dssp EEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred ccccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence 9999864331 1 1366788889998 98874
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.15 E-value=0.092 Score=45.68 Aligned_cols=44 Identities=16% Similarity=0.152 Sum_probs=34.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhcCC
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGI 248 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~g~ 248 (390)
.+|||+|+ |.+|...+..+...|+ +|+++++... ..+.++.++.
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~ 47 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI 47 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence 47999998 9999999998888899 9999997653 3455555543
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.03 E-value=0.97 Score=35.44 Aligned_cols=97 Identities=18% Similarity=0.193 Sum_probs=62.1
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEEec-CCh-hhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhc----------C
Q 016363 205 TVAIFGLGAVGLAVAEGARLN-RASKIIGVD-INP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMT----------D 271 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~-~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~----------~ 271 (390)
+|.|.|-|-+|...++.+... .. .++++- .++ +....+..++.+......+ ......+.. .
T Consensus 4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 77 (172)
T d2czca2 4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEE-----FIPRFEKEGFEVAGTLNDLL 77 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGG-----GHHHHHHHTCCCSCBHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeeccccc-----ceeeecccCccccchhhhhh
Confidence 688999999999888877644 35 666554 222 3344555566544332211 111111100 1
Q ss_pred CCccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 272 GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 272 ~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
.++|+|+||+|.-...+.+-..+..+ -+.|.++.+.
T Consensus 78 ~~vDvViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~ 113 (172)
T d2czca2 78 EKVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEK 113 (172)
T ss_dssp TTCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSC
T ss_pred ccCCEEEECCCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence 27999999999988788888899988 8888887543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=91.97 E-value=0.093 Score=44.97 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=29.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHH
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIG 243 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~ 243 (390)
.+||+|+ +++|.+.++.+...|+ +|+.++++ +++.+.+
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~ 43 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL 43 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHHH
Confidence 4578888 9999999999999999 88876654 4444433
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=91.82 E-value=0.4 Score=41.99 Aligned_cols=38 Identities=21% Similarity=0.101 Sum_probs=30.8
Q ss_pred CCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChhhHH
Q 016363 203 GSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFE 241 (390)
Q Consensus 203 g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~ 241 (390)
++..||+|+ .++|.+.++.+...|+ +|+.+.++.....
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~~ 42 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNI 42 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHHH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhhh
Confidence 567899995 3899999999999999 8998887665433
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.74 E-value=0.15 Score=38.42 Aligned_cols=39 Identities=21% Similarity=0.268 Sum_probs=34.6
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
..++++.+|+|+|+|.+|+-++..++.+|. +|..+.+.+
T Consensus 30 ~~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~ 68 (133)
T d1q1ra2 30 RQLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA 68 (133)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred HhhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence 456778999999999999999999999999 999998764
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=91.68 E-value=0.38 Score=37.20 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
++..+|.|+|+|.+|...+.++...+..+++.++.++++.
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~ 44 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP 44 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence 5567899999999999988888888876899999887654
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=91.67 E-value=0.14 Score=37.66 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.++|+|+|+|.+|+-+++.++.+|. +|..+.+.+
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD 54 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence 4689999999999999999999999 999998765
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.61 E-value=0.079 Score=45.01 Aligned_cols=42 Identities=17% Similarity=0.057 Sum_probs=33.4
Q ss_pred CCCEEEEEcC-ChHHHHHHH-HHH--HcCCCeEEEecCChhhHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAE-GAR--LNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~-la~--~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
.|+++||+|+ +++|.+.++ ||+ ..|+ +|+.+++++++++.+.
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~ 50 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLK 50 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHH
Confidence 4677888898 999998776 455 3688 9999999999877653
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=91.60 E-value=0.14 Score=44.27 Aligned_cols=38 Identities=18% Similarity=0.181 Sum_probs=32.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
......+|+|+|+|..|+.++..+...|. +|.+++.++
T Consensus 26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~ 63 (370)
T d2iida1 26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE 63 (370)
T ss_dssp CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 34456799999999999999999999999 999999654
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.56 E-value=0.14 Score=38.01 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=30.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.++++|+|+|.+|+-+++++..+|. +|..+.+++
T Consensus 23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP 56 (122)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence 4799999999999999999999999 999988654
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=91.40 E-value=0.14 Score=37.80 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=30.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
..++++|+|+|.+|+-.++.++.+|. +|..+.+++
T Consensus 21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence 45889999999999999999999999 888888653
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.34 E-value=0.095 Score=44.28 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=29.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
.|+|+|+|+.|++++.+++..|..+|.++.++++
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 6899999999999999999999768888887643
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=91.19 E-value=0.44 Score=37.52 Aligned_cols=42 Identities=24% Similarity=0.176 Sum_probs=37.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.+
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~ 44 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKAN 44 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHT
T ss_pred EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcC
Confidence 47899999999998888888899 9999999999998886644
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.18 E-value=0.7 Score=36.46 Aligned_cols=81 Identities=12% Similarity=0.020 Sum_probs=51.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhcCC---------cEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGI---------TDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~g~---------~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
+|.|+|+|..|.+.+..+...|. +|....+..+ ..+.+..-.. ...+... .++.+.+. +
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~-----~ 71 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWP----EQLEKCLE-----N 71 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECG----GGHHHHHT-----T
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhcccccccc----ccHHHHHh-----c
Confidence 58899999999998888888887 8988887433 3344432110 0111111 23333332 6
Q ss_pred ccEEEEcccChHHHHHHHHHhcc
Q 016363 274 ADYCFECIGLTSVMNDAFNSSRE 296 (390)
Q Consensus 274 ~D~vid~~g~~~~~~~~~~~l~~ 296 (390)
+|+|+-++.... +...++.+.+
T Consensus 72 ad~Ii~avps~~-~~~~~~~l~~ 93 (180)
T d1txga2 72 AEVVLLGVSTDG-VLPVMSRILP 93 (180)
T ss_dssp CSEEEECSCGGG-HHHHHHHHTT
T ss_pred cchhhcccchhh-hHHHHHhhcc
Confidence 899999999766 6666655444
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=91.16 E-value=0.084 Score=43.80 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.|+|+|+|..|+.++..+...|.++|+++.+++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 489999999999999999999975799998764
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.11 E-value=0.25 Score=42.58 Aligned_cols=97 Identities=18% Similarity=0.213 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC---------Cc-EEEcCCCCCCcCHHHHHHhhc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---------IT-DFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g---------~~-~v~~~~~~~~~~~~~~i~~~~ 270 (390)
..-++|||+|+|. |..+-.+++.....+|.+++-+++=.+.++++- .. .++. .|-.+.+++..
T Consensus 79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~------~Da~~~l~~~~ 151 (290)
T d1xj5a_ 79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNAA 151 (290)
T ss_dssp SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTSC
T ss_pred CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE------ccHHHHHhhcc
Confidence 4557999998643 334446677777668999999998888887642 11 2222 24455666554
Q ss_pred CCCccEEE-EcccC---------hHHHHHHHHHhccCCceEEEEc
Q 016363 271 DGGADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 271 ~~g~D~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+.+|+|| |+... ..-.+.+.++|+++ |.++.-.
T Consensus 152 ~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~ 195 (290)
T d1xj5a_ 152 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQA 195 (290)
T ss_dssp TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred ccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEec
Confidence 45899887 55432 22467888999998 9888654
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.07 E-value=0.084 Score=45.26 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=30.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
.|+|+|+|+.|++++..++..|. +|++++++++
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence 48999999999999999999999 9999998753
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=91.06 E-value=0.21 Score=41.89 Aligned_cols=37 Identities=41% Similarity=0.318 Sum_probs=32.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.--.|.+|+|.|.|.+|..+++++...|+ +|++++.+
T Consensus 27 ~~l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD~ 63 (242)
T d1v9la1 27 GGIEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSDI 63 (242)
T ss_dssp SCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeecc
Confidence 33478999999999999999999999999 89887743
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=90.86 E-value=0.12 Score=42.18 Aligned_cols=85 Identities=20% Similarity=0.160 Sum_probs=57.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|..++++++..|+ +|++.++...+... .. +.. .++.+.+. ..|+|.-++
T Consensus 44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~---~~----~~~-----~~l~~l~~-----~~D~v~~~~ 105 (199)
T d1dxya1 44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGDH---PD----FDY-----VSLEDLFK-----QSDVIDLHV 105 (199)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSCC---TT----CEE-----CCHHHHHH-----HCSEEEECC
T ss_pred cceeeeeeecccccccccccccccce-eeeccCCccchhhh---cc----hhH-----HHHHHHHH-----hcccceeee
Confidence 46899999999999999999999999 99999976443100 00 011 23444443 368887665
Q ss_pred cChHH-----HHHHHHHhccCCceEEEEc
Q 016363 282 GLTSV-----MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~-----~~~~~~~l~~~~G~~v~~g 305 (390)
..... -...++.|+++ ..+|.++
T Consensus 106 plt~~T~~li~~~~l~~mk~~-a~lIN~a 133 (199)
T d1dxya1 106 PGIEQNTHIINEAAFNLMKPG-AIVINTA 133 (199)
T ss_dssp CCCGGGTTSBCHHHHHHSCTT-EEEEECS
T ss_pred cccccccccccHHHhhccCCc-eEEEecc
Confidence 53221 24677888887 7777776
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=90.83 E-value=0.36 Score=39.96 Aligned_cols=105 Identities=20% Similarity=0.254 Sum_probs=68.4
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhh-
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM- 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~- 269 (390)
...+.....+||-+|. .+|..++.+|+.+.- .+|+.++.+++..+.+++ .|...-+.... .+..+.+.++
T Consensus 53 ~L~~~~~~k~iLEiGT-~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~---g~a~~~L~~l~ 128 (227)
T d1susa1 53 MLLKLINAKNTMEIGV-YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMI 128 (227)
T ss_dssp HHHHHHTCCEEEEECC-GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHH
T ss_pred HHHHhcCCCcEEEecc-hhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee---hHHHHHHHHHH
Confidence 3445556789999986 357777788877641 299999999998877754 45432222111 2445555554
Q ss_pred ----cCCCccEEE-EcccChH--HHHHHHHHhccCCceEEEEc
Q 016363 270 ----TDGGADYCF-ECIGLTS--VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ----~~~g~D~vi-d~~g~~~--~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.||.|| |+--... .++.+++.|+++ |.++.=-
T Consensus 129 ~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DN 170 (227)
T d1susa1 129 KDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN 170 (227)
T ss_dssp HCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEET
T ss_pred hccccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEcc
Confidence 233799997 5444322 467899999998 8887554
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=90.73 E-value=0.15 Score=40.87 Aligned_cols=83 Identities=22% Similarity=0.290 Sum_probs=58.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...+++++.+|+ +|++.++++... ..... .++.+.++ ..|+|+-++
T Consensus 41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~~-------~~~~~-------~~l~ell~-----~sDiv~~~~ 100 (181)
T d1qp8a1 41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKEG-------PWRFT-------NSLEEALR-----EARAAVCAL 100 (181)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCCS-------SSCCB-------SCSHHHHT-----TCSEEEECC
T ss_pred cCceEEEeccccccccceeeeecccc-cccccccccccc-------ceeee-------echhhhhh-----ccchhhccc
Confidence 58899999999999999999999999 999999775321 11111 13333332 588988766
Q ss_pred cChH-----HHHHHHHHhccCCceEEEEc
Q 016363 282 GLTS-----VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~-----~~~~~~~~l~~~~G~~v~~g 305 (390)
+-.. .-...++.|+++ ..+|.+|
T Consensus 101 pl~~~t~~li~~~~l~~mk~~-ailIN~~ 128 (181)
T d1qp8a1 101 PLNKHTRGLVKYQHLALMAED-AVFVNVG 128 (181)
T ss_dssp CCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred ccccccccccccceeeecccc-ceEEecc
Confidence 5422 115677888887 8888776
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=90.69 E-value=0.12 Score=43.54 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=29.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
+.|||+|+ +++|.+.++.+...|+ +|+.++++++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence 35789998 9999999999999999 9999997654
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=90.69 E-value=0.17 Score=36.97 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=30.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.++++|+|+|.+|+-+++.++.+|+ +|..+.+.+
T Consensus 21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE 54 (115)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence 4789999999999999999999999 899888654
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.61 E-value=0.33 Score=36.12 Aligned_cols=88 Identities=18% Similarity=0.291 Sum_probs=55.5
Q ss_pred CCCEEEEEcCChH--H------HHHHH---HHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGLGAV--G------LAVAE---GARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Gag~v--G------~~ai~---la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
.-++|||+|+|+. | .+++| .++..|+ ++|.+..+++...--..+ +|++.... -+ .+.+.+..
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfeP----lt-~e~v~~Ii 78 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEP----IH-WEVVRKII 78 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSC----CC-HHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeec----CC-HHHHHHHH
Confidence 3478999998763 3 44444 4556799 899999999876433332 34443211 11 22333333
Q ss_pred CC-CccEEEEcccChHHHHHHHHHhcc
Q 016363 271 DG-GADYCFECIGLTSVMNDAFNSSRE 296 (390)
Q Consensus 271 ~~-g~D~vid~~g~~~~~~~~~~~l~~ 296 (390)
.. +.|.|+-..|+..+++.+.++...
T Consensus 79 ~~E~pd~il~~~GGQtalnla~~L~~~ 105 (127)
T d1a9xa3 79 EKERPDAVLPTMGGQTALNCALELERQ 105 (127)
T ss_dssp HHHCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred HHhCcCCeEEEeeeehHhHHHHHHHHc
Confidence 33 889999999988877777776543
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.56 E-value=0.15 Score=37.91 Aligned_cols=34 Identities=12% Similarity=-0.051 Sum_probs=29.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
..++++|+|+|.+|+-.++.++.+|. +|..+.++
T Consensus 19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS 52 (122)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence 34689999999999999999999999 78887754
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=90.53 E-value=0.63 Score=37.09 Aligned_cols=85 Identities=13% Similarity=0.117 Sum_probs=58.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+.+|+|+|.|.+|...+++++..|. +|++.++..... ....... .++.+.++ ..|+|.-+.
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~-----~~l~ell~-----~sDii~i~~ 104 (188)
T d1sc6a1 43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQV-----QHLSDLLN-----MSDVVSLHV 104 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEEC-----SCHHHHHH-----HCSEEEECC
T ss_pred cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhh-----hhHHHHHh-----hccceeecc
Confidence 57899999999999999999999999 999999653321 0011111 23444443 368887766
Q ss_pred cChH-----HHHHHHHHhccCCceEEEEc
Q 016363 282 GLTS-----VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~-----~~~~~~~~l~~~~G~~v~~g 305 (390)
+-.. .-...++.|+++ ..+|.++
T Consensus 105 plt~~T~~li~~~~l~~mk~~-a~lIN~a 132 (188)
T d1sc6a1 105 PENPSTKNMMGAKEISLMKPG-SLLINAS 132 (188)
T ss_dssp CSSTTTTTCBCHHHHHHSCTT-EEEEECS
T ss_pred cCCcchhhhccHHHHhhCCCC-CEEEEcC
Confidence 5322 125677888887 7777776
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=90.50 E-value=0.57 Score=37.38 Aligned_cols=98 Identities=11% Similarity=0.132 Sum_probs=60.6
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC--c--EEEcCCCCCCcCHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--T--DFINPATCGDKTVSQV 265 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~--~--~v~~~~~~~~~~~~~~ 265 (390)
+.+.....++++||=+|+|. |..++.+++ .+. +|++++.++...+.+++ .+. . .++..+ +.+
T Consensus 44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d------~~~- 113 (194)
T d1dusa_ 44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD------LYE- 113 (194)
T ss_dssp HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS------TTT-
T ss_pred HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcc------hhh-
Confidence 44677889999999998742 344445554 455 99999999988777754 222 1 222221 111
Q ss_pred HHhhcCCCccEEEEccc---Ch----HHHHHHHHHhccCCceEEEE
Q 016363 266 IKEMTDGGADYCFECIG---LT----SVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 266 i~~~~~~g~D~vid~~g---~~----~~~~~~~~~l~~~~G~~v~~ 304 (390)
...++.+|+|+.... +. ..++.+.+.|+++ |+++.+
T Consensus 114 --~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 156 (194)
T d1dusa_ 114 --NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV 156 (194)
T ss_dssp --TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred --hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence 122338999996322 22 1356677889998 887653
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=90.45 E-value=0.16 Score=42.11 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=30.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
++-.+|+|+|+|..|++++..+...|. +|.++++.
T Consensus 4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~ 38 (268)
T d1c0pa1 4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD 38 (268)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence 345689999999999999999999999 99999864
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=90.44 E-value=0.19 Score=37.51 Aligned_cols=36 Identities=22% Similarity=0.274 Sum_probs=31.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+..++++|+|+|.+|+-+++..+.+|. +|..+.+.+
T Consensus 24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~ 59 (125)
T d1ojta2 24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD 59 (125)
T ss_dssp CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence 446899999999999999999999999 899988653
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=90.40 E-value=0.13 Score=38.16 Aligned_cols=37 Identities=19% Similarity=0.321 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
+..++++|+|+|.+|+-+++..+.+|. +|..+.+++.
T Consensus 23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~ 59 (123)
T d1dxla2 23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE 59 (123)
T ss_dssp SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence 345799999999999999999999999 9999987654
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=90.32 E-value=0.33 Score=41.46 Aligned_cols=97 Identities=14% Similarity=0.173 Sum_probs=64.7
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHcC--CCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhc
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNR--ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g--~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
..++.++.+||=+|+| .|..+..+++..+ . +|++++.++.-++.+++ .+.+.-+...+ +. ++.
T Consensus 22 ~~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d-----~~----~~~ 90 (281)
T d2gh1a1 22 VWKITKPVHIVDYGCG-YGYLGLVLMPLLPEGS-KYTGIDSGETLLAEARELFRLLPYDSEFLEGD-----AT----EIE 90 (281)
T ss_dssp TSCCCSCCEEEEETCT-TTHHHHHHTTTSCTTC-EEEEEECCHHHHHHHHHHHHSSSSEEEEEESC-----TT----TCC
T ss_pred HhccCCcCEEEEecCc-CCHHHHHHHHhCCCCC-EEEEEecchhHhhhhhcccccccccccccccc-----cc----ccc
Confidence 3467788999999986 4788888888654 4 89999999988877754 34332221111 11 112
Q ss_pred -CCCccEEEEccc-----C-hHHHHHHHHHhccCCceEEEEc
Q 016363 271 -DGGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 271 -~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 305 (390)
++.+|+|+..-. . ...++.+.+.|+++ |.++..-
T Consensus 91 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~ 131 (281)
T d2gh1a1 91 LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE 131 (281)
T ss_dssp CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred ccCCceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence 237999985432 2 22478899999999 9887654
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.31 E-value=0.21 Score=37.07 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.++++|+|+|.+|+-++..++.+|. +|..+.+++
T Consensus 22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence 3789999999999999999999999 999999764
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=90.30 E-value=0.35 Score=37.78 Aligned_cols=94 Identities=16% Similarity=0.183 Sum_probs=63.8
Q ss_pred ccccchhhHHHHHHHHhC-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC
Q 016363 182 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~-~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 259 (390)
.+||+....+..| +.-+ --.|++|+|+|- ..+|.-.+.++...|+ +|+......
T Consensus 16 ~~PcTp~aI~~lL-~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t---------------------- 71 (166)
T d1b0aa1 16 LRPCTPRGIVTLL-ERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT---------------------- 71 (166)
T ss_dssp SCCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC----------------------
T ss_pred CCCchHHHHHHHH-HHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc----------------------
Confidence 4555544444433 4444 347999999997 6799999999999999 887765321
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+++-++|.+..+. -+.++++ ..++.+|..
T Consensus 72 ~~l~~~~~-----~ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~ 111 (166)
T d1b0aa1 72 KNLRHHVE-----NADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN 111 (166)
T ss_dssp SCHHHHHH-----HCSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred chhHHHHh-----hhhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence 34444444 3799999999776322 3467776 788888854
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=90.29 E-value=1.2 Score=32.66 Aligned_cols=92 Identities=12% Similarity=0.020 Sum_probs=62.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
.++|.|.|.+|...++.++ +. .|++++.++++.+.++..|...+.. + ..-.+.+++..-..++.++-++...
T Consensus 2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~G-d----~~~~~~L~~a~i~~A~~vi~~~~~d 73 (129)
T d2fy8a1 2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVHG-D----PTRVSDLEKANVRGARAVIVNLESD 73 (129)
T ss_dssp CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEES-C----TTSHHHHHHTTCTTCSEEEECCSSH
T ss_pred EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCcccccc-c----cCCHHHHHHhhhhcCcEEEEeccch
Confidence 5889999999998877664 44 6788888999998888888755442 2 2334566665444899999888875
Q ss_pred HH---HHHHHHHhccCCceEEEEc
Q 016363 285 SV---MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 285 ~~---~~~~~~~l~~~~G~~v~~g 305 (390)
.. .-...+.+.+. .+++...
T Consensus 74 ~~n~~~~~~~r~~~~~-~~iia~~ 96 (129)
T d2fy8a1 74 SETIHCILGIRKIDES-VRIIAEA 96 (129)
T ss_dssp HHHHHHHHHHHHHCSS-SCEEEEC
T ss_pred hhhHHHHHHHHHHCCC-ceEEEEE
Confidence 52 22334455555 5665443
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=90.21 E-value=1 Score=38.82 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=65.3
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC--ChhhHHHHHhcCCcEEEcCCC-----------------
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPAT----------------- 256 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~--~~~~~~~~~~~g~~~v~~~~~----------------- 256 (390)
+...+.++++|+...+|.-|++++..++..|.+-+|++.. ++.|.+.++.+|++.+.....
T Consensus 54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~ 133 (310)
T d1y7la1 54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD 133 (310)
T ss_dssp HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence 3445678877777678999999999999999854444433 345778888899876642211
Q ss_pred ---------CCCc--------CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhc
Q 016363 257 ---------CGDK--------TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295 (390)
Q Consensus 257 ---------~~~~--------~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~ 295 (390)
+.+. ....++.+..++.+|.|+-++|+...+.-....++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk 189 (310)
T d1y7la1 134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK 189 (310)
T ss_dssp TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence 0011 11223444445579999999998776666666554
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.07 E-value=0.29 Score=42.97 Aligned_cols=95 Identities=20% Similarity=0.246 Sum_probs=52.6
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCC--c-EEEcCCCCCCcCHHHHHHh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGI--T-DFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~--~-~v~~~~~~~~~~~~~~i~~ 268 (390)
+...+.+|++||-+|+| .|..+..+| ..|+++|++++.++ ..+.+ +..+. . .++..+. .++ .
T Consensus 32 ~~~~~~~~~~VLDlGcG-tG~ls~~aa-~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~---~~l-----~ 100 (328)
T d1g6q1_ 32 QNKDLFKDKIVLDVGCG-TGILSMFAA-KHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKL---EDV-----H 100 (328)
T ss_dssp HHHHHHTTCEEEEETCT-TSHHHHHHH-HTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT---TTS-----C
T ss_pred hccccCCcCEEEEeCCC-CCHHHHHHH-HhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeeh---hhc-----c
Confidence 34456689999999986 355554334 46877999999875 22223 33332 1 2232221 111 1
Q ss_pred hcCCCccEEEEc-cc----Ch----HHHHHHHHHhccCCceEE
Q 016363 269 MTDGGADYCFEC-IG----LT----SVMNDAFNSSREGWGKTV 302 (390)
Q Consensus 269 ~~~~g~D~vid~-~g----~~----~~~~~~~~~l~~~~G~~v 302 (390)
+..+.+|+|+.. .+ .. ..+...-+.|+++ |+++
T Consensus 101 ~~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii 142 (328)
T d1g6q1_ 101 LPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF 142 (328)
T ss_dssp CSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred CcccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence 122389999752 22 11 1233344789998 8874
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.99 E-value=0.16 Score=43.73 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
++..+|+|+|+|..|+.|+..+...|. +|.++..++
T Consensus 3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD 38 (449)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 456679999999999999999999999 999998653
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=89.72 E-value=0.47 Score=40.18 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
..++.+||=+|+| .|..+..+++.. +. ++++++.++.-++.+++...+. .+..+. .++ .+.++.+|+|
T Consensus 82 ~~~~~~iLDiGcG-~G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~---~~l-----~~~~~sfD~v 151 (268)
T d1p91a_ 82 DDKATAVLDIGCG-EGYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTSMDAI 151 (268)
T ss_dssp CTTCCEEEEETCT-TSTTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTCEEEE
T ss_pred CCCCCEEEEeCCC-CcHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeeh---hhc-----cCCCCCEEEE
Confidence 5677889888874 345555666655 55 9999999999888887644332 222111 111 1223379999
Q ss_pred EEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 278 FECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+....-.. +..+.+.|+++ |.++...
T Consensus 152 ~~~~~~~~-~~e~~rvLkpg-G~l~~~~ 177 (268)
T d1p91a_ 152 IRIYAPCK-AEELARVVKPG-GWVITAT 177 (268)
T ss_dssp EEESCCCC-HHHHHHHEEEE-EEEEEEE
T ss_pred eecCCHHH-HHHHHHHhCCC-cEEEEEe
Confidence 96555444 88899999999 9988764
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=89.70 E-value=0.14 Score=42.94 Aligned_cols=33 Identities=24% Similarity=0.205 Sum_probs=29.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
-|+|+|+|+.|++++..+...|. +|.+++++++
T Consensus 6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~ 38 (253)
T d2gqfa1 6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK 38 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence 48899999999999999999999 9999998764
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=89.58 E-value=0.1 Score=46.60 Aligned_cols=75 Identities=17% Similarity=0.176 Sum_probs=43.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhcC-Cc--EEEcCCCCCCcCHHHHHHhhcCC-CccEE
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFG-IT--DFINPATCGDKTVSQVIKEMTDG-GADYC 277 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~g-~~--~v~~~~~~~~~~~~~~i~~~~~~-g~D~v 277 (390)
+|||+|+ |.+|...+..+...|...|+++++... +.+.+..+. .. ..+..+- .+ ...+.++..+ .+|+|
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~l~~~~~~~~~d~V 77 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADI---CD-SAEITRIFEQYQPDAV 77 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCT---TC-HHHHHHHHHHHCCSEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccC---CC-HHHHHHHHHhCCCCEE
Confidence 6999998 999999999888889855666664221 222222221 11 1111111 11 1233333334 79999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|++++.
T Consensus 78 ihlAa~ 83 (361)
T d1kewa_ 78 MHLAAE 83 (361)
T ss_dssp EECCSC
T ss_pred EECccc
Confidence 998763
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=89.51 E-value=0.15 Score=42.42 Aligned_cols=32 Identities=31% Similarity=0.416 Sum_probs=28.6
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
|+|+|+|+.|++++..+...|. +|+.+++++.
T Consensus 5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK 36 (251)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence 7899999999999988888999 9999997653
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.50 E-value=0.3 Score=39.56 Aligned_cols=69 Identities=19% Similarity=0.275 Sum_probs=43.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
++|||+|+ |.+|...+..+...|. .+|++..+++... ...+- ... .++.+.. +...+..|.|+.|+
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------~~~~~-~~~---~d~~~~~-~~~~~~~d~vi~~~ 70 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------HPRLD-NPV---GPLAELL-PQLDGSIDTAFCCL 70 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------CTTEE-CCB---SCHHHHG-GGCCSCCSEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------ccccc-ccc---cchhhhh-hccccchheeeeee
Confidence 68999999 9999999998888875 2677777653211 11111 111 2344333 22333799999998
Q ss_pred cCh
Q 016363 282 GLT 284 (390)
Q Consensus 282 g~~ 284 (390)
|..
T Consensus 71 g~~ 73 (212)
T d2a35a1 71 GTT 73 (212)
T ss_dssp CCC
T ss_pred eee
Confidence 764
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=89.46 E-value=0.22 Score=38.83 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=30.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~ 237 (390)
.|.+|+|+|+|.+|+.+++.++..+.+ +|+.+++++
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 478999999999999999988888743 788887665
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=89.35 E-value=0.19 Score=43.29 Aligned_cols=37 Identities=27% Similarity=0.268 Sum_probs=32.1
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
+|+++||+|+ | ++|.+.++.+...|+ +|+.+.+++..
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~ 46 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL 46 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence 6889999997 5 799999999999999 99998876543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.14 E-value=0.34 Score=42.34 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=28.9
Q ss_pred EE-EEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 205 TV-AIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 205 ~V-lI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
+| ||+|+ |.+|...+..+...|+ +|+++++...
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~~ 36 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRSS 36 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCS
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCCc
Confidence 56 99998 9999999999988999 9999998543
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=89.12 E-value=2.5 Score=32.77 Aligned_cols=96 Identities=19% Similarity=0.174 Sum_probs=55.0
Q ss_pred hCCCCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhc
Q 016363 198 AGVEVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 198 ~~~~~g~~VlI~Ga--g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~ 270 (390)
..+..|.+||=.++ |.+|. . |...|+ +|++++.+++..+.+++ ++.. .+...+. +.........
T Consensus 37 ~~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~----d~~~~~~~~~ 107 (171)
T d1ws6a1 37 LRYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV----EVFLPEAKAQ 107 (171)
T ss_dssp HHCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH----HHHHHHHHHT
T ss_pred ccccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh----hccccccccc
Confidence 45788889887765 55554 3 334688 89999999998877753 4543 4443322 2211122223
Q ss_pred CCCccEEE-Ec---ccChHHHHHHH--HHhccCCceEEE
Q 016363 271 DGGADYCF-EC---IGLTSVMNDAF--NSSREGWGKTVI 303 (390)
Q Consensus 271 ~~g~D~vi-d~---~g~~~~~~~~~--~~l~~~~G~~v~ 303 (390)
.+.||+|| |. .+....+..++ ..++++ |.++.
T Consensus 108 ~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi 145 (171)
T d1ws6a1 108 GERFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL 145 (171)
T ss_dssp TCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred CCccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence 34899997 42 23223234333 346766 76653
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=89.02 E-value=0.91 Score=37.54 Aligned_cols=34 Identities=29% Similarity=0.275 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHH-HHcCCCeEEEecC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVDI 235 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la-~~~g~~~Vi~~~~ 235 (390)
-.|.+|+|.|.|.+|..+++.+ +..|+ +|++++.
T Consensus 29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vsd 63 (234)
T d1b26a1 29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVSD 63 (234)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEeec
Confidence 4688999999999999999877 56799 8888773
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=88.99 E-value=0.16 Score=43.19 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=31.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
-.+|||+|+ |.+|...+..+...|. +|++++|++..
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~~ 39 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTA 39 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCcc
Confidence 367999998 9999999999999998 99999987543
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=88.90 E-value=1 Score=35.45 Aligned_cols=94 Identities=20% Similarity=0.225 Sum_probs=56.6
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEEecC-Chhh-HHHHHhcCCcEEEcCCC--------C-CCcCHHHHHHhhcCC
Q 016363 205 TVAIFGLGAVGLAVAEGARLN-RASKIIGVDI-NPEK-FEIGKKFGITDFINPAT--------C-GDKTVSQVIKEMTDG 272 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~-~~~~-~~~~~~~g~~~v~~~~~--------~-~~~~~~~~i~~~~~~ 272 (390)
+|.|.|-|-+|+..++.+... .. +|+++.. .+.. ...+...+.......+. . ...++.... .
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~ 76 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K 76 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence 578999999999999988865 45 7777643 3322 22333333222111100 0 001122111 1
Q ss_pred CccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 273 g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
++|+|+||+|.-...+.+-..+..+ -+++..+
T Consensus 77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~ 108 (178)
T d1b7go1 77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQG 108 (178)
T ss_dssp HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECT
T ss_pred cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEEC
Confidence 5899999999877677888888766 6777665
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.89 E-value=0.31 Score=39.41 Aligned_cols=40 Identities=33% Similarity=0.577 Sum_probs=35.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
+|.|+|+|-+|+..+..+...|. +|++.+.++++.+.+..
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~ 41 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ 41 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence 58899999999998888888899 99999999999888865
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=88.86 E-value=0.2 Score=43.75 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=30.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
..+|+|+|||..|+.++..+...|. +|.++..++
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD 35 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence 5789999999999999999998898 999998664
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.80 E-value=0.18 Score=41.16 Aligned_cols=31 Identities=16% Similarity=0.303 Sum_probs=28.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
|+|+|+|..|+.++..+...|. +|.++.+++
T Consensus 8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD 38 (297)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence 8899999999999999989998 999999865
|
| >d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Salmonella typhimurium [TaxId: 90371]
Probab=88.71 E-value=2.7 Score=35.59 Aligned_cols=100 Identities=18% Similarity=0.169 Sum_probs=63.3
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec--CChhhHHHHHhcCCcEEEcC-------------------
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDFINP------------------- 254 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~~g~~~v~~~------------------- 254 (390)
+...++++.+|+..++|..|.+++-.++.+|.+-++++. .++.+.+.++.+|++.+...
T Consensus 54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~ 133 (302)
T d1fcja_ 54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASD 133 (302)
T ss_dssp HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHTS
T ss_pred HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhhh
Confidence 455677787776667799999999999999985333333 33456777787887544211
Q ss_pred -------CCCCCc--------CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhc
Q 016363 255 -------ATCGDK--------TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 295 (390)
Q Consensus 255 -------~~~~~~--------~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~ 295 (390)
..+.+. .+..++.+..++.+|+++-++|+...+.-....++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk 189 (302)
T d1fcja_ 134 PQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK 189 (302)
T ss_dssp TTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred ccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence 110111 13344555555578999999998665555554444
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.65 E-value=0.81 Score=35.80 Aligned_cols=95 Identities=16% Similarity=0.261 Sum_probs=63.8
Q ss_pred hccccchhhHHHHHHHHhCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC
Q 016363 181 CLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 258 (390)
+.+||+....+..| +..++ -.|.+|+|+|. .-+|.-.+.++...|+ +|+......
T Consensus 17 ~~~PcTp~aii~lL-~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t--------------------- 73 (170)
T d1a4ia1 17 CFIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT--------------------- 73 (170)
T ss_dssp CCCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------
T ss_pred CCCCChHHHHHHHH-HHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEeccc---------------------
Confidence 44566555444433 44454 37999999998 6799999999999999 888776431
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+++-++|.+..+ --+.++++ -.++.+|..
T Consensus 74 -~~l~~~~~-----~aDivi~a~G~~~~i--~~~~vk~g-~iviDvgi~ 113 (170)
T d1a4ia1 74 -AHLDEEVN-----KGDILVVATGQPEMV--KGEWIKPG-AIVIDCGIN 113 (170)
T ss_dssp -SSHHHHHT-----TCSEEEECCCCTTCB--CGGGSCTT-CEEEECCCB
T ss_pred -ccHHHHHh-----hccchhhcccccccc--ccccccCC-CeEeccCcc
Confidence 23333322 578888888876622 23567776 777888753
|
| >d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.64 E-value=2.1 Score=36.87 Aligned_cols=108 Identities=21% Similarity=0.174 Sum_probs=66.2
Q ss_pred HHhCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEec---CChhhHHHHHhcCCcEEEcCC----------------
Q 016363 196 KVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVD---INPEKFEIGKKFGITDFINPA---------------- 255 (390)
Q Consensus 196 ~~~~~~~g~~VlI~-Gag~vG~~ai~la~~~g~~~Vi~~~---~~~~~~~~~~~~g~~~v~~~~---------------- 255 (390)
+...++++...+|. .+|..|.+.+..++.+|. +.+++. .++.|.+.++.+|++.++...
T Consensus 57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~-~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~ 135 (320)
T d1z7wa1 57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGY-KLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILA 135 (320)
T ss_dssp HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTC-EEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCceEEeeCCchHHHHHHHHHHhhcc-ceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHH
Confidence 44556666665555 569999999999999998 444333 335678888889986543211
Q ss_pred ---------CCCCc--------CHHHHHHhhcCCCccEEEEcccChHHHHHH---HHHhccCCceEEEEc
Q 016363 256 ---------TCGDK--------TVSQVIKEMTDGGADYCFECIGLTSVMNDA---FNSSREGWGKTVILG 305 (390)
Q Consensus 256 ---------~~~~~--------~~~~~i~~~~~~g~D~vid~~g~~~~~~~~---~~~l~~~~G~~v~~g 305 (390)
.+.+. +...++.+...+.+|.++-++|+...+.-. ++...+. -+++.+-
T Consensus 136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igve 204 (320)
T d1z7wa1 136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGVE 204 (320)
T ss_dssp HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeeccc
Confidence 11111 123334444445799999999987645433 3444444 5555443
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=88.61 E-value=0.17 Score=41.22 Aligned_cols=30 Identities=27% Similarity=0.197 Sum_probs=27.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
|+|+|+|+.|+.++..+...|. +|+++++.
T Consensus 6 vvVIGgGpaGl~aA~~aa~~G~-kV~vie~~ 35 (221)
T d1dxla1 6 VVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR 35 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence 7899999999999999999999 89998764
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.55 E-value=1.3 Score=38.36 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=68.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHH----HhcCCcEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
..+...++.|+|+|..+...++.+. ....++|.+.++++++.+.+ +..+.....+. .+.+ .+
T Consensus 121 a~~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~--------~~a~-----~~ 187 (320)
T d1omoa_ 121 ARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP--------AEEA-----SR 187 (320)
T ss_dssp SCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC--------HHHH-----TS
T ss_pred ccCCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch--------hhhh-----cc
Confidence 3345578899999999988777655 56788999999999887555 33454444321 1222 26
Q ss_pred ccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH
Q 016363 274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 318 (390)
Q Consensus 274 ~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 318 (390)
+|+|+-|+.....+ .-.+.++++ -.+..+|...+ ..-.++..
T Consensus 188 aDiV~taT~s~~P~-~~~~~l~~G-~hv~~iGs~~p-~~~Eld~~ 229 (320)
T d1omoa_ 188 CDVLVTTTPSRKPV-VKAEWVEEG-THINAIGADGP-GKQELDVE 229 (320)
T ss_dssp SSEEEECCCCSSCC-BCGGGCCTT-CEEEECSCCST-TCCCBCHH
T ss_pred ccEEEEeccCcccc-cchhhcCCC-CeEeecCCccc-cccccCHH
Confidence 99999888865422 223568887 88888886543 23344444
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=88.54 E-value=0.51 Score=41.13 Aligned_cols=98 Identities=14% Similarity=0.075 Sum_probs=59.7
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHHhhc-
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMT- 270 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~~~~- 270 (390)
.+..+|++||=.++|. |..++.+|+ .+. +|++++.++..++.+++ .|.+ .++. .+..+.++++.
T Consensus 141 ~~~~~g~rVLDl~~gt-G~~s~~~a~-g~~-~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~------~d~~~~~~~~~~ 211 (318)
T d1wxxa2 141 MERFRGERALDVFSYA-GGFALHLAL-GFR-EVVAVDSSAEALRRAEENARLNGLGNVRVLE------ANAFDLLRRLEK 211 (318)
T ss_dssp GGGCCEEEEEEETCTT-THHHHHHHH-HEE-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEE------SCHHHHHHHHHH
T ss_pred HHHhCCCeeeccCCCC-cHHHHHHHh-cCC-cEEeecchHHHHHHHHHHHHHcCCCCcceee------ccHHHHhhhhHh
Confidence 3445799999887633 233344554 234 99999999999888864 4543 2232 23444444433
Q ss_pred -CCCccEEEE-c--ccC--h----------HHHHHHHHHhccCCceEEEEc
Q 016363 271 -DGGADYCFE-C--IGL--T----------SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 271 -~~g~D~vid-~--~g~--~----------~~~~~~~~~l~~~~G~~v~~g 305 (390)
++.||+|+- . .+. . ..+..+++.|+++ |.++.+.
T Consensus 212 ~~~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~s 261 (318)
T d1wxxa2 212 EGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATAS 261 (318)
T ss_dssp TTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred hhcCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEe
Confidence 238999983 2 111 0 1245677889998 9988765
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=88.47 E-value=0.2 Score=39.44 Aligned_cols=30 Identities=23% Similarity=0.123 Sum_probs=27.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
-|+|+|+|+.|+.|+..+...|. +|..+.+
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~ 32 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE 32 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence 38899999999999999999999 7888875
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=88.45 E-value=0.51 Score=36.09 Aligned_cols=39 Identities=26% Similarity=0.335 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEK 239 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~ 239 (390)
..+.+|.|+|+|.+|..++..+...+. .+++.++..+++
T Consensus 4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~ 43 (148)
T d1ldna1 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK 43 (148)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence 356789999999999998888887764 479999988876
|
| >d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=88.45 E-value=1.1 Score=39.90 Aligned_cols=55 Identities=24% Similarity=0.146 Sum_probs=41.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC---ChhhHHHHHhcCCcEEEcC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~~g~~~v~~~ 254 (390)
+++++++|+-..+|..|.+.+.+++.+|. +++++.. ++.|.+.++.+|++.+...
T Consensus 140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGi-k~~Iv~P~~~~~~K~~~ira~GAeVi~~~ 197 (382)
T d1wkva1 140 RVEKGSLVADATSSNFGVALSAVARLYGY-RARVYLPGAAEEFGKLLPRLLGAQVIVDP 197 (382)
T ss_dssp TSCTTCEEEEECCHHHHHHHHHHHHHTTC-EEEEEEETTSCHHHHHHHHHTTCEEEEET
T ss_pred ccCCCCEEEEeCCcHHHHHHHHHHHHcCC-CEEEEeeccccccccccccccCcceeecC
Confidence 47788775555669999999999999999 5544443 4567888899999876544
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.37 E-value=0.36 Score=37.25 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.+++|+|+|+|.+|.=++..+...|++.|+.+.+.+
T Consensus 44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 467899999999999999999999997788887653
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=88.28 E-value=0.32 Score=39.97 Aligned_cols=97 Identities=10% Similarity=0.012 Sum_probs=58.7
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc--EEEcCCCCCCcCHHHHHHhhc-
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMT- 270 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~i~~~~- 270 (390)
+....+...+.+||=+|+|. |..+..++ ..|. +|++++.+++..+.+++...+ .++.. ++. +..
T Consensus 12 ~~~~~~~~~~~~VLDiGcG~-G~~~~~l~-~~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~------~~~----~~~~ 78 (225)
T d2p7ia1 12 VRAFTPFFRPGNLLELGSFK-GDFTSRLQ-EHFN-DITCVEASEEAISHAQGRLKDGITYIHS------RFE----DAQL 78 (225)
T ss_dssp HHHHGGGCCSSCEEEESCTT-SHHHHHHT-TTCS-CEEEEESCHHHHHHHHHHSCSCEEEEES------CGG----GCCC
T ss_pred HHHhhhhCCCCcEEEEeCCC-cHHHHHHH-HcCC-eEEEEeCcHHHhhhhhcccccccccccc------ccc----cccc
Confidence 33445556678899998853 55555554 4577 899999999999988764322 22221 111 122
Q ss_pred CCCccEEEEcc-----cChH-HHHHHH-HHhccCCceEEEE
Q 016363 271 DGGADYCFECI-----GLTS-VMNDAF-NSSREGWGKTVIL 304 (390)
Q Consensus 271 ~~g~D~vid~~-----g~~~-~~~~~~-~~l~~~~G~~v~~ 304 (390)
++.+|+|+..- ..+. .+..+. ++|+++ |.++..
T Consensus 79 ~~~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~ 118 (225)
T d2p7ia1 79 PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV 118 (225)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred ccccccccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence 23899997422 2222 244555 568888 887654
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.23 E-value=0.79 Score=39.90 Aligned_cols=30 Identities=17% Similarity=0.075 Sum_probs=27.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
++|||+|+ |.+|...+..+...|. +|++++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld 33 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID 33 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence 58999998 9999999999988998 899986
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.18 E-value=0.32 Score=35.82 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=31.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+.+.+++|+|+|.+|+-+++.+...|. +|..+.+++
T Consensus 30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~ 65 (122)
T d1xhca2 30 ENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA 65 (122)
T ss_dssp HHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred hcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence 345789999999999999999999999 899988664
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=88.16 E-value=0.13 Score=41.22 Aligned_cols=35 Identities=20% Similarity=0.126 Sum_probs=30.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
++..|+|+|+|+.|+.|+..+...|. +|+.+.+.+
T Consensus 4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~ 38 (190)
T d1trba1 4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME 38 (190)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence 45679999999999999999999999 888887543
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=88.14 E-value=0.87 Score=39.45 Aligned_cols=97 Identities=19% Similarity=0.171 Sum_probs=62.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC----------Cc-EEEcCCCCCCcCHHHHHHh
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----------IT-DFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g----------~~-~v~~~~~~~~~~~~~~i~~ 268 (390)
....++|||+|+|. |..+-.+++.....+|.++..+++=.+.++++- .. .++. .|..+.+++
T Consensus 75 ~~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~------~Da~~~l~~ 147 (312)
T d1uira_ 75 HPEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLER 147 (312)
T ss_dssp SSCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHH
T ss_pred CCCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE------chHHHHhhh
Confidence 34567999998753 455556666665559999999998888776531 11 2222 245555654
Q ss_pred hcCCCccEEE-Ecc---cC---------hHHHHHHHHHhccCCceEEEEc
Q 016363 269 MTDGGADYCF-ECI---GL---------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~g~D~vi-d~~---g~---------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+++.+|+|| |.. +. ..-.+.+.+.|+++ |.++.-.
T Consensus 148 -~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~~ 195 (312)
T d1uira_ 148 -TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQT 195 (312)
T ss_dssp -CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEEE
T ss_pred -cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEec
Confidence 344899997 542 21 12356788999999 9887543
|
| >d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=88.05 E-value=0.94 Score=38.65 Aligned_cols=101 Identities=13% Similarity=0.201 Sum_probs=58.8
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~ 270 (390)
.....++|++||=.-|++=|-.+ +++..+.-.+|++.+.++.|.+.++ .+|... ++...+ ..... ...
T Consensus 96 ~~L~~~~g~~vLD~CAaPGgKt~-~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~---~~~~~---~~~ 168 (284)
T d1sqga2 96 TWLAPQNGEHILDLCAAPGGKTT-HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG---RYPSQ---WCG 168 (284)
T ss_dssp HHHCCCTTCEEEEESCTTCHHHH-HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT---TCTHH---HHT
T ss_pred cccCccccceeEeccCccccchh-hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc---cccch---hcc
Confidence 35688999998877433323222 3333333238999999999987664 477653 333222 12211 122
Q ss_pred CCCccEEE-E--cccChH-------------------------HHHHHHHHhccCCceEEEE
Q 016363 271 DGGADYCF-E--CIGLTS-------------------------VMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 271 ~~g~D~vi-d--~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~ 304 (390)
.+.||.|+ | |+|... .+..+++.++++ |++|..
T Consensus 169 ~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYs 229 (284)
T d1sqga2 169 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYA 229 (284)
T ss_dssp TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred cccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEe
Confidence 33799997 5 666533 245566677777 776643
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=88.03 E-value=0.17 Score=42.78 Aligned_cols=32 Identities=31% Similarity=0.396 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+|+|+|+|..|+.++..+...|. +|+++.+++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA 33 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 58999999999999999999999 899998653
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=88.00 E-value=0.51 Score=34.65 Aligned_cols=86 Identities=15% Similarity=0.085 Sum_probs=50.9
Q ss_pred CCEEEEEcCChH--H------HH---HHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 203 GSTVAIFGLGAV--G------LA---VAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 203 g~~VlI~Gag~v--G------~~---ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
.++|||+|+|+. | .+ ++.-++..|+ ++|.+..+|+...--..+ ++++.... -+ .+.+.+...
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lYfep----lt-~e~v~~Ii~ 76 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLYFEP----VT-LEDVLEIVR 76 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEECCC----CS-HHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceEEcc----CC-HHHHHHHHH
Confidence 468999998763 3 34 4445567799 999999998876422222 34443211 12 222333222
Q ss_pred C-CccEEEEcccChHHHHHHHHHhc
Q 016363 272 G-GADYCFECIGLTSVMNDAFNSSR 295 (390)
Q Consensus 272 ~-g~D~vid~~g~~~~~~~~~~~l~ 295 (390)
. +.|.|+-..|+..+++.+.++-+
T Consensus 77 ~E~p~~ii~~~GGQtalnla~~L~~ 101 (121)
T d1a9xa4 77 IEKPKGVIVQYGGQTPLKLARALEA 101 (121)
T ss_dssp HHCCSEEECSSSTHHHHTTHHHHHH
T ss_pred HhCCCEEEeehhhhhHHHHHHHHHH
Confidence 2 78888888888776665555433
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.92 E-value=5.2 Score=31.77 Aligned_cols=97 Identities=12% Similarity=0.164 Sum_probs=56.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh----------HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK----------FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~----------~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
+|++.|.+.+|..+++.+...|. +|.++.+.+++ .+++++.+... +...+..++.+.+.+.+. .+
T Consensus 2 kiv~~~~~~~g~~~l~~L~~~g~-~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~-~~~~~~~~~~~~~~i~~~---~~ 76 (203)
T d2blna2 2 KTVVFAYHDMGCLGIEALLAAGY-EISAIFTHTDNPGEKAFYGSVARLAAERGIPV-YAPDNVNHPLWVERIAQL---SP 76 (203)
T ss_dssp EEEEEECHHHHHHHHHHHHHTTC-EEEEEECCCC------CCCCHHHHHHHHTCCE-ECCSCCCSHHHHHHHHHT---CC
T ss_pred eEEEEecCHHHHHHHHHHHHCCC-CEEEEEcCCCCCCcccccCHHHHHHHHcCCcc-eecccccchhhhhhhhhh---cc
Confidence 57788888899999999888898 78776654433 23445555543 322221224455555443 78
Q ss_pred cEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 275 D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
|+++-+......-+..++.. +. |.+.......
T Consensus 77 Dlii~~g~~~ii~~~il~~~-~~-~~iN~H~slL 108 (203)
T d2blna2 77 DVIFSFYYRHLIYDEILQLA-PA-GAFNLHGSLL 108 (203)
T ss_dssp SEEEEESCCSCCCHHHHTTC-TT-CEEEEESSCT
T ss_pred cceeeeecccchhcccchhh-HH-HHHHHhhhcc
Confidence 99987665433123344433 34 6666665433
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=87.86 E-value=1.1 Score=35.96 Aligned_cols=73 Identities=25% Similarity=0.304 Sum_probs=46.6
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC-CcEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
...++ .|++||=.|+|. |..++. +...|+++|++++.+++..+.+++-- ...++.. ++. + .++.+
T Consensus 43 ~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~------D~~----~-l~~~f 108 (197)
T d1ne2a_ 43 NDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA------DVS----E-ISGKY 108 (197)
T ss_dssp HHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC------CGG----G-CCCCE
T ss_pred HcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEE------ehh----h-cCCcc
Confidence 34444 699999998853 444433 44567768999999999888887632 2233332 221 1 23589
Q ss_pred cEEEEccc
Q 016363 275 DYCFECIG 282 (390)
Q Consensus 275 D~vid~~g 282 (390)
|+||..-+
T Consensus 109 D~Vi~NPP 116 (197)
T d1ne2a_ 109 DTWIMNPP 116 (197)
T ss_dssp EEEEECCC
T ss_pred eEEEeCcc
Confidence 99996533
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=87.80 E-value=2.4 Score=32.97 Aligned_cols=95 Identities=25% Similarity=0.316 Sum_probs=59.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEecCC-h-hhHHHHHhcCCcEEEcCCC---------CC-CcCHHHHHHhhcC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNR-ASKIIGVDIN-P-EKFEIGKKFGITDFINPAT---------CG-DKTVSQVIKEMTD 271 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~-~-~~~~~~~~~g~~~v~~~~~---------~~-~~~~~~~i~~~~~ 271 (390)
+|.|-|-|-+|..+++++...+ . +++++-.. + .....+..++.+......+ .. ..++.+..
T Consensus 3 ~VgINGfGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~----- 76 (171)
T d1cf2o1 3 AVAINGYGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML----- 76 (171)
T ss_dssp EEEEECCSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-----
T ss_pred EEEEEcCcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-----
Confidence 6788899999999998876554 4 66665432 2 3334444555444332211 00 00111111
Q ss_pred CCccEEEEcccChHHHHHHHHHhccCCceEEEEcc
Q 016363 272 GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 272 ~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
.++|+|+||+|.-...+.+-..+..+ -+.+..+.
T Consensus 77 ~~vDvViEcTG~f~~~~~~~~hl~~G-~K~vi~~~ 110 (171)
T d1cf2o1 77 DEADIVIDCTPEGIGAKNLKMYKEKG-IKAIFQGG 110 (171)
T ss_dssp HTCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred cCCCEEEEccCCCCCHHHHHHHHHcC-CCEEEECC
Confidence 26999999999987778888888877 78777663
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=87.64 E-value=0.78 Score=38.40 Aligned_cols=100 Identities=10% Similarity=-0.086 Sum_probs=63.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CCcEEEcCCCCCCcCHHHHHHhhc--CC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
+.....++.+||=+|+| .|..+..++..... +|++++.+++-++.+++. .....+++.. .++ .++. ++
T Consensus 87 ~~l~~~~~~~vLD~GcG-~G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~---~d~----~~~~~~~~ 157 (254)
T d1xtpa_ 87 ASLPGHGTSRALDCGAG-IGRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL---ASM----ETATLPPN 157 (254)
T ss_dssp HTSTTCCCSEEEEETCT-TTHHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE---SCG----GGCCCCSS
T ss_pred hhCCCCCCCeEEEeccc-CChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE---ccc----cccccCCC
Confidence 34445677788888886 47777888776665 899999999988888763 2222222111 121 1222 23
Q ss_pred CccEEEEcccC-----h---HHHHHHHHHhccCCceEEEEc
Q 016363 273 GADYCFECIGL-----T---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 273 g~D~vid~~g~-----~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+|+|+..--- + ..++.+.+.|+++ |.++..-
T Consensus 158 ~fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e 197 (254)
T d1xtpa_ 158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE 197 (254)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence 79999853322 1 2367788899998 9887653
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=87.52 E-value=0.36 Score=40.71 Aligned_cols=34 Identities=32% Similarity=0.328 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
-.|.+|+|.|-|.+|..+++++...|+ +|+++..
T Consensus 34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavsD 67 (255)
T d1bgva1 34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLSG 67 (255)
T ss_dssp STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEec
Confidence 478899999999999999999999999 8888763
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=87.42 E-value=0.41 Score=40.81 Aligned_cols=97 Identities=20% Similarity=0.131 Sum_probs=63.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC-----C----c-EEEcCCCCCCcCHHHHHHhh
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----I----T-DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g-----~----~-~v~~~~~~~~~~~~~~i~~~ 269 (390)
....++|||+|+|. |..+..+++..+..+|.+++-.++=.+.++++- + . .++.. |..+.+++
T Consensus 73 ~~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~------D~~~~l~~- 144 (274)
T d1iy9a_ 73 HPNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD------DGFMHIAK- 144 (274)
T ss_dssp SSSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES------CSHHHHHT-
T ss_pred cCCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec------hHHHHHhh-
Confidence 34568999998743 444556667666669999999998888776642 1 1 22221 33444543
Q ss_pred cCCCccEEE-Eccc---------ChHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+++++|+|+ |... +..-.+.+.+.|+++ |.++.-+
T Consensus 145 ~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~ 189 (274)
T d1iy9a_ 145 SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT 189 (274)
T ss_dssp CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred cCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence 334899997 5433 222367888999999 9988654
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=87.26 E-value=1.4 Score=38.07 Aligned_cols=98 Identities=14% Similarity=0.152 Sum_probs=62.3
Q ss_pred HhCCCCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh------cCCc--EEEcCCCCCCcCHHHHH
Q 016363 197 VAGVEVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK------FGIT--DFINPATCGDKTVSQVI 266 (390)
Q Consensus 197 ~~~~~~g~~VlI~Ga--g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~------~g~~--~v~~~~~~~~~~~~~~i 266 (390)
...+.+|++||=..+ |+.++.+ ...|++.|++++.++..++++++ ++.+ .++. .+..+.+
T Consensus 139 ~~~~~~g~~VLdlf~~~G~~sl~a----a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~------~d~~~~l 208 (317)
T d2b78a2 139 INGSAAGKTVLNLFSYTAAFSVAA----AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV------MDVFDYF 208 (317)
T ss_dssp HHTTTBTCEEEEETCTTTHHHHHH----HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE------SCHHHHH
T ss_pred HHHhhCCCceeecCCCCcHHHHHH----HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE------ccHHHHH
Confidence 456889999998855 5555432 24677789999999998887764 2222 2332 2445555
Q ss_pred Hhhc-CC-CccEEE-Ecc--cC------------hHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMT-DG-GADYCF-ECI--GL------------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~-~~-g~D~vi-d~~--g~------------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+. .+ .||+|| |.- +. ...+..++++|+++ |.++.+.
T Consensus 209 ~~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~s 263 (317)
T d2b78a2 209 KYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIAST 263 (317)
T ss_dssp HHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred HHHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEe
Confidence 5443 23 799998 421 11 01355678899998 9888664
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=87.17 E-value=0.95 Score=36.96 Aligned_cols=90 Identities=21% Similarity=0.247 Sum_probs=58.2
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCCeEE-EecCChhhHHHH-HhcCCc--EEEcCCCCCCcCHHHHHHhhcCC-CccEE
Q 016363 205 TVAIFGLGAVGLA-VAEGARLN-RASKII-GVDINPEKFEIG-KKFGIT--DFINPATCGDKTVSQVIKEMTDG-GADYC 277 (390)
Q Consensus 205 ~VlI~Gag~vG~~-ai~la~~~-g~~~Vi-~~~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~~i~~~~~~-g~D~v 277 (390)
+|.|+|+|.+|.. .+...+.. +. +|+ ++++++++.+.+ ++++.+ .+..+.+ + .++... .+|+|
T Consensus 35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d-----~----~ell~~~~iD~V 104 (221)
T d1h6da1 35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN-----F----DKIAKDPKIDAV 104 (221)
T ss_dssp EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS-----G----GGGGGCTTCCEE
T ss_pred EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc-----h----hhhcccccceee
Confidence 6889999999863 44444433 66 666 456677776544 556643 3333332 2 233334 89999
Q ss_pred EEcccChHHHHHHHHHhccCCceEEEEcc
Q 016363 278 FECIGLTSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+-++......+.+..+|.. |+=+++.-
T Consensus 105 ~I~tp~~~H~~~~~~al~~--gk~v~~EK 131 (221)
T d1h6da1 105 YIILPNSLHAEFAIRAFKA--GKHVMCEK 131 (221)
T ss_dssp EECSCGGGHHHHHHHHHHT--TCEEEECS
T ss_pred eeccchhhhhhHHHHhhhc--chhhhcCC
Confidence 9999988767888888875 56666653
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=87.14 E-value=0.71 Score=38.98 Aligned_cols=72 Identities=17% Similarity=0.189 Sum_probs=43.2
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEecC--ChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcc
Q 016363 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECI 281 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~--~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~ 281 (390)
|||+|+ |.+|...+..+...|..+|++++. +..+...+.++......+. .++.+.+.....- ..+.|+...
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~a 76 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK-----EDFLIQIMAGEEFGDVEAIFHEG 76 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH-----HHHHHHHHTTCCCSSCCEEEECC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc-----hHHHHHHhhhhcccchhhhhhhc
Confidence 899998 999999988888889757888752 2333444444443333322 2233333332223 677777654
Q ss_pred c
Q 016363 282 G 282 (390)
Q Consensus 282 g 282 (390)
+
T Consensus 77 a 77 (307)
T d1eq2a_ 77 A 77 (307)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=87.02 E-value=2.8 Score=36.17 Aligned_cols=112 Identities=14% Similarity=0.041 Sum_probs=66.1
Q ss_pred HHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC---ChhhHHHHHhcCCcEEEcCCCCC---------
Q 016363 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFINPATCG--------- 258 (390)
Q Consensus 191 ~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~~g~~~v~~~~~~~--------- 258 (390)
++.+.....-.+..+|+...+|..|.+++..++..|. +++++.. ++.|.+.++.+|++.+....++.
T Consensus 63 ~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~ 141 (331)
T d1tdja1 63 YAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGV-KALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIEL 141 (331)
T ss_dssp HHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTC-CEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccc-cceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhh
Confidence 3334333333445566666779999999999999998 4444442 34577888889987654322100
Q ss_pred -------------Cc-------CHHHHHHhhcCCCccEEEEcccChHHHH---HHHHHhccCCceEEEEc
Q 016363 259 -------------DK-------TVSQVIKEMTDGGADYCFECIGLTSVMN---DAFNSSREGWGKTVILG 305 (390)
Q Consensus 259 -------------~~-------~~~~~i~~~~~~g~D~vid~~g~~~~~~---~~~~~l~~~~G~~v~~g 305 (390)
++ ++..++.+. .+.+|.||-++|+...+. ..++.+.+. .+++.+-
T Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve 209 (331)
T d1tdja1 142 SQQQGFTWVPPFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVE 209 (331)
T ss_dssp HHHHCCEECCSSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred hhcCCCccccccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEec
Confidence 00 011222222 126999999998766443 444555555 6776664
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=86.88 E-value=0.3 Score=42.30 Aligned_cols=32 Identities=19% Similarity=0.156 Sum_probs=28.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.|+|+|||..|++++..++..|. +|+++++.+
T Consensus 9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~ 40 (298)
T d1w4xa1 9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAG 40 (298)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence 58999999999999999999999 899998764
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=86.66 E-value=0.26 Score=40.03 Aligned_cols=30 Identities=20% Similarity=0.219 Sum_probs=27.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
|+|+|+|+.|+.++..|..+|. +|..+.+.
T Consensus 5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK 34 (217)
T ss_dssp EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 7899999999999999999999 88888764
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=86.45 E-value=0.32 Score=41.22 Aligned_cols=61 Identities=16% Similarity=0.295 Sum_probs=37.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEccc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g 282 (390)
+|||+|+ |.+|...+..+...| .++++++..... - .|..+ .+.+.+...+ ++|+||++.+
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g--~~v~~~~~~~~~------~----~Dl~~------~~~~~~~i~~~~~D~Vih~Aa 63 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVG--NLIALDVHSKEF------C----GDFSN------PKGVAETVRKLRPDVIVNAAA 63 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTS--EEEEECTTCSSS------C----CCTTC------HHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCC--CEEEEECCCccc------c----CcCCC------HHHHHHHHHHcCCCEEEEecc
Confidence 6999998 999999888777666 456665443211 0 11111 1233333334 7899999886
Q ss_pred C
Q 016363 283 L 283 (390)
Q Consensus 283 ~ 283 (390)
.
T Consensus 64 ~ 64 (298)
T d1n2sa_ 64 H 64 (298)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=86.17 E-value=4.6 Score=31.18 Aligned_cols=95 Identities=18% Similarity=0.227 Sum_probs=56.1
Q ss_pred EEEEEcCChHHHHHHHHHHHc---CCCeEEEecC--ChhhHHHHHhc----CC---c------E---------EEcCCCC
Q 016363 205 TVAIFGLGAVGLAVAEGARLN---RASKIIGVDI--NPEKFEIGKKF----GI---T------D---------FINPATC 257 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~---g~~~Vi~~~~--~~~~~~~~~~~----g~---~------~---------v~~~~~~ 257 (390)
+|.|-|-|=+|..+.+.+... .. +|+++-. +.+....+-++ |. + . +.+..+-
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p 80 (169)
T d1hdgo1 2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence 678889999999999877643 35 7777642 23344444322 21 0 0 1111110
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
.+-+|.+. ++|+||||+|.-...+.+...+..+ -+-|.+..+.
T Consensus 81 ~~i~W~~~-------gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~ 123 (169)
T d1hdgo1 81 SKLPWKDL-------GVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPA 123 (169)
T ss_dssp GGSCHHHH-------TCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred hhCCcccc-------CCCEEEEecceeccccchhhhccCC-CceEEEeccc
Confidence 01112111 8999999999866677888888876 6556665444
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=86.11 E-value=3.9 Score=32.63 Aligned_cols=95 Identities=12% Similarity=0.100 Sum_probs=60.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
..||=+|+| .|..++.+|+..--..+++++.++..+..+ ++.+.+.+.-... +.......+.++.+|.|+-
T Consensus 31 PlvLeIGcG-~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~----Da~~l~~~~~~~~~d~v~i 105 (204)
T d2fcaa1 31 PIHIEVGTG-KGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI----DADTLTDVFEPGEVKRVYL 105 (204)
T ss_dssp CEEEEECCT-TSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC----CGGGHHHHCCTTSCCEEEE
T ss_pred ceEEEEEec-CcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc----chhhhhcccCchhhhcccc
Confidence 355666775 577888888876433999999999877655 3456543321111 2222232333447888875
Q ss_pred cccCh--------------HHHHHHHHHhccCCceEEEE
Q 016363 280 CIGLT--------------SVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 280 ~~g~~--------------~~~~~~~~~l~~~~G~~v~~ 304 (390)
....+ ..+..+.+.|+++ |.+...
T Consensus 106 ~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~ 143 (204)
T d2fcaa1 106 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFK 143 (204)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEE
T ss_pred ccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEE
Confidence 54432 3477888999999 988765
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=86.06 E-value=0.36 Score=40.37 Aligned_cols=95 Identities=17% Similarity=0.169 Sum_probs=57.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEE-cCCCCCCcCHHHHHHhhcCC-
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI-NPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~-~~~~~~~~~~~~~i~~~~~~- 272 (390)
++++++||=+|+|. |..+..+++. |..+|++++.+++-++.+++ .+.. .+. -..+ .... .+..+
T Consensus 22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D-----~~~~--~~~~~~ 92 (252)
T d1ri5a_ 22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQD-----SYGR--HMDLGK 92 (252)
T ss_dssp CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESC-----TTTS--CCCCSS
T ss_pred CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcc-----hhhh--cccccc
Confidence 67899999999864 4445566664 54489999999998887754 3322 111 1111 0000 11123
Q ss_pred CccEEEEcccCh----------HHHHHHHHHhccCCceEEEE
Q 016363 273 GADYCFECIGLT----------SVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 273 g~D~vid~~g~~----------~~~~~~~~~l~~~~G~~v~~ 304 (390)
.+|+|+....-. ..++.+.+.|+++ |.++..
T Consensus 93 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~ 133 (252)
T d1ri5a_ 93 EFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT 133 (252)
T ss_dssp CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred cceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence 799998643321 1345677889998 988754
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.05 E-value=0.32 Score=39.74 Aligned_cols=32 Identities=25% Similarity=0.180 Sum_probs=27.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
-|+|+|+|+.|+.|+..|..+|. +|+.++..+
T Consensus 7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG 38 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence 37889999999999999999999 888888653
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=85.96 E-value=0.27 Score=42.49 Aligned_cols=32 Identities=19% Similarity=0.266 Sum_probs=28.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.|+|+|||..|+.++..+...|. +|.++..++
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~ 34 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN 34 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence 48999999999999999988898 899999654
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=85.91 E-value=2.2 Score=33.07 Aligned_cols=97 Identities=19% Similarity=0.220 Sum_probs=57.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh--hhHHHHHhc----C---CcE-------EEc------CCCCCCcCH
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP--EKFEIGKKF----G---ITD-------FIN------PATCGDKTV 262 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~--~~~~~~~~~----g---~~~-------v~~------~~~~~~~~~ 262 (390)
+|.|-|-|-+|.++.+++...+. +|+++-... +....+.++ | .+. +++ ... .+.
T Consensus 2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~---~~p 77 (168)
T d2g82a1 2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAV---KDP 77 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECC---SSG
T ss_pred EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEec---CCh
Confidence 57888999999999998887788 666665332 223333222 2 100 010 111 010
Q ss_pred HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 263 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 263 ~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+.+ .+...++|+|+||+|.-...+.+...+..+ -+-|.+..+.
T Consensus 78 -~~i-~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~ 120 (168)
T d2g82a1 78 -KEI-PWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPA 120 (168)
T ss_dssp -GGC-CTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred -HHC-cccccCCceeEeccccccchHHhhhhhccc-cceeeecccc
Confidence 011 111128999999999877677888888876 6666665443
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=85.78 E-value=0.32 Score=39.56 Aligned_cols=31 Identities=26% Similarity=0.155 Sum_probs=28.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.|+|+|+|+.|+.++..|..+|. +|..+.+.
T Consensus 7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ 37 (220)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence 37899999999999999999999 89998865
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=85.73 E-value=4.7 Score=30.60 Aligned_cols=85 Identities=14% Similarity=0.133 Sum_probs=54.6
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCCeEEEe-cCChhhHHH-HHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 205 TVAIFGLGAVGLA-VAEGARLN-RASKIIGV-DINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 205 ~VlI~Gag~vG~~-ai~la~~~-g~~~Vi~~-~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
+|.|+|+|.+|.- .+...+.. +. +++++ ++++++.+. .+.++... + .++.+ +. ..+|+|+-|
T Consensus 3 ri~iIG~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~~~~~---~-----~~~~~-l~----~~~D~V~I~ 68 (164)
T d1tlta1 3 RIGVVGLGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESWRIPY---A-----DSLSS-LA----ASCDAVFVH 68 (164)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHHTCCB---C-----SSHHH-HH----TTCSEEEEC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcccccc---c-----ccchh-hh----hhccccccc
Confidence 5889999999964 56666644 66 66654 566666544 45566542 1 12222 21 258999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+......+.+..++.. |+=+.+.
T Consensus 69 tp~~~h~~~~~~al~~--gk~V~~E 91 (164)
T d1tlta1 69 SSTASHFDVVSTLLNA--GVHVCVD 91 (164)
T ss_dssp SCTTHHHHHHHHHHHT--TCEEEEE
T ss_pred ccchhccccccccccc--cceeecc
Confidence 9988767777788875 4555565
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=85.73 E-value=0.28 Score=42.77 Aligned_cols=32 Identities=28% Similarity=0.294 Sum_probs=26.4
Q ss_pred EEEEEcCChHHHHHHHHHH-----HcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGAR-----LNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~-----~~g~~~Vi~~~~~~ 237 (390)
-|+|+|+|++|++++.++. ..|. +|+++++.+
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~ 45 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS 45 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence 3899999999999887763 4689 899998764
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=85.70 E-value=0.35 Score=39.19 Aligned_cols=30 Identities=23% Similarity=0.203 Sum_probs=27.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
|+|+|+|+.|+.++..|...|. +|..+.+.
T Consensus 6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~ 35 (223)
T d1ebda1 6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG 35 (223)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 7888999999999999999999 88888754
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.69 E-value=0.3 Score=37.35 Aligned_cols=92 Identities=13% Similarity=0.014 Sum_probs=53.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g--~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
-+|.|+|| |-+|+-.++++...+ ..++..+.++...-+.+...+.+..+. +. ....-.+.|++|-+
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~-------~~----~~~~~~~~d~vf~a 71 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVG-------DV----DSFDFSSVGLAFFA 71 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECE-------EG----GGCCGGGCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhc-------cc----hhhhhccceEEEec
Confidence 46899999 999999999987543 226666654432221111111111110 00 00011279999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEccc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.+...+.+..-+....+ .++++.+..
T Consensus 72 ~p~~~s~~~~~~~~~~g-~~VID~Ss~ 97 (144)
T d2hjsa1 72 AAAEVSRAHAERARAAG-CSVIDLSGA 97 (144)
T ss_dssp SCHHHHHHHHHHHHHTT-CEEEETTCT
T ss_pred CCcchhhhhccccccCC-ceEEeechh
Confidence 99877556666666666 777776643
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=85.67 E-value=0.56 Score=37.48 Aligned_cols=39 Identities=28% Similarity=0.330 Sum_probs=33.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
+|.|+|.|-+|+..+.++ +.|. +|++++.++++.+.+..
T Consensus 2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN 40 (196)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence 588999999999887655 4698 99999999999888864
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=85.64 E-value=0.42 Score=41.01 Aligned_cols=33 Identities=30% Similarity=0.276 Sum_probs=30.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
.|.+|+|.|-|.+|..+++++...|+ +|++++.
T Consensus 35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vsD 67 (293)
T d1hwxa1 35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVGE 67 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEc
Confidence 57899999999999999999999999 9998873
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.63 E-value=0.35 Score=38.57 Aligned_cols=32 Identities=19% Similarity=0.069 Sum_probs=27.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
..|+|+|+|+.|+.++..+...|. +|+++++.
T Consensus 6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~ 37 (192)
T d1vdca1 6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW 37 (192)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence 479999999999999999999999 78888744
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=85.28 E-value=0.37 Score=39.48 Aligned_cols=31 Identities=26% Similarity=0.221 Sum_probs=27.9
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
|+|+|+|+.|+.++..|...|. +|..+.+.+
T Consensus 9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~ 39 (229)
T d1ojta1 9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK 39 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence 7888999999999999999999 899987654
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.26 E-value=0.45 Score=43.35 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=29.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.+|||+|+|++|..++..+...|..++..++..
T Consensus 38 ~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D 70 (426)
T d1yovb1 38 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD 70 (426)
T ss_dssp CCEEEECSSTTHHHHHHHHHTTTCCCEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 679999999999999999999999899998843
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=85.22 E-value=5.7 Score=30.65 Aligned_cols=95 Identities=24% Similarity=0.303 Sum_probs=59.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecC-C--hhhHHHHHhc----C---Cc------E-E--------EcCCCCCC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDI-N--PEKFEIGKKF----G---IT------D-F--------INPATCGD 259 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~-~--~~~~~~~~~~----g---~~------~-v--------~~~~~~~~ 259 (390)
+|.|-|-|-+|+++...+...+. .|+++-. . .+....+-++ | .+ . + ....+-.+
T Consensus 2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~ 80 (169)
T d1dssg1 2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN 80 (169)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence 57788889999999998888888 6666643 2 3444444332 2 10 0 1 11111001
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
-+|.+ -++|+||||+|.-...+.+...+..+ -+-|.+..+.
T Consensus 81 i~W~~-------~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~ 121 (169)
T d1dssg1 81 IPWSK-------AGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPS 121 (169)
T ss_dssp CCHHH-------HTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCC
T ss_pred CCccc-------cCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCc
Confidence 11211 18999999999877678888888876 6777776543
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=85.00 E-value=0.83 Score=34.95 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=33.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
|..+|.|+|+|.+|...+.++...+..+++.++.++++.
T Consensus 2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~ 40 (150)
T d1t2da1 2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP 40 (150)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence 456899999999999988888888888999999877653
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.91 E-value=1.3 Score=32.77 Aligned_cols=62 Identities=19% Similarity=0.186 Sum_probs=49.6
Q ss_pred HHHHhCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 194 AWKVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~-Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
+.+.++++.-+.+++. ..-..-..+.++++.+|..++++...+++..+.++++|++.++++.
T Consensus 57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~ 119 (132)
T d1lssa_ 57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE 119 (132)
T ss_dssp HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence 3477888877766665 3344556788899999988999999999999999999999999754
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.72 E-value=1.9 Score=36.72 Aligned_cols=98 Identities=16% Similarity=0.171 Sum_probs=61.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC---------Cc-EEEcCCCCCCcCHHHHHHh
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---------IT-DFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g---------~~-~v~~~~~~~~~~~~~~i~~ 268 (390)
.....++|||+|+|. |..+-.+++..+..+|.++.-.++=.+.++++- .. .++. .|..+.+++
T Consensus 75 ~~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~------~Da~~~l~~ 147 (285)
T d2o07a1 75 SHPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMKQ 147 (285)
T ss_dssp TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHT
T ss_pred hCcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE------ccHHHHHhc
Confidence 345568999998743 344445667666669999999988888776532 11 2222 234455543
Q ss_pred hcCCCccEEE-EcccCh---------HHHHHHHHHhccCCceEEEEc
Q 016363 269 MTDGGADYCF-ECIGLT---------SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~g~D~vi-d~~g~~---------~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+++|+|| |..... .-.+.+.+.|+++ |.++.-+
T Consensus 148 -~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~ 192 (285)
T d2o07a1 148 -NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG 192 (285)
T ss_dssp -CSSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred -CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEec
Confidence 344899997 544311 1256677899998 9887654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=84.71 E-value=0.61 Score=39.96 Aligned_cols=32 Identities=22% Similarity=0.195 Sum_probs=27.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
++|||+|+ |.+|...+..+...|. .|++++..
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~~ 35 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTR 35 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecCc
Confidence 47999998 9999999999988898 77777643
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=84.70 E-value=0.74 Score=40.02 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=29.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
..+|||+|+ |.+|...+..+...|. +|+++++
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~ 48 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN 48 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 467999998 9999999999999999 9999975
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.51 E-value=0.36 Score=41.81 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=27.8
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
|+|+|+|..|++++..++..|. +|+++..++
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 7899999999999999999999 899998643
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=84.39 E-value=0.35 Score=37.85 Aligned_cols=33 Identities=33% Similarity=0.376 Sum_probs=26.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEec
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVD 234 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~ 234 (390)
.+++|+|+|+|.+|.-++..++.+|.. +|+...
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEec
Confidence 468999999999999999999999974 344444
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=84.39 E-value=0.93 Score=34.54 Aligned_cols=48 Identities=15% Similarity=-0.004 Sum_probs=38.8
Q ss_pred hhhHHHHHHHHhCCCCCCEEEEE--cCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 187 VSTGVGAAWKVAGVEVGSTVAIF--GLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 187 ~~tA~~~l~~~~~~~~g~~VlI~--Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+.|....+ ..+..++..|+|+ |+|.+|+-+++.+...|+ +|..+.+.+
T Consensus 25 v~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~ 74 (156)
T d1djqa2 25 QLTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVH 74 (156)
T ss_dssp EECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred EECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCC
Confidence 34555543 4677888999888 679999999999999999 999998764
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=84.39 E-value=0.44 Score=39.95 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=28.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
-|+|+|+|.+|++++.-+...|. +|+++++.+
T Consensus 6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 48999999999999888888898 999999753
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.33 E-value=1.9 Score=32.56 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=31.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEecCChhhHHH
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEI 242 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~ 242 (390)
.+|.|+|| |.+|..++.++...+. .+++.++.++.+-+.
T Consensus 1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a 41 (144)
T d1mlda1 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA 41 (144)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH
T ss_pred CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh
Confidence 36899997 9999999999988875 578888877655433
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=84.32 E-value=0.44 Score=40.90 Aligned_cols=32 Identities=31% Similarity=0.489 Sum_probs=28.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
-|+|+|+|..|+.++.-|...|+ +|+++++.+
T Consensus 18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP 49 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence 48999999999999999999999 899998654
|
| >d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Hypothetical methyltransferase PH1374 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=84.08 E-value=3.5 Score=35.43 Aligned_cols=101 Identities=17% Similarity=0.254 Sum_probs=59.6
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhhc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
...+.++|++||=.-|++=| =+.+++..++ -..+++.+.++.|...++ .+|...++.... +...+ ...
T Consensus 110 ~~l~~~~g~~vlD~CAapGg-Kt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~-d~~~~-----~~~ 182 (313)
T d1ixka_ 110 VALDPKPGEIVADMAAAPGG-KTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHS-SSLHI-----GEL 182 (313)
T ss_dssp HHHCCCTTCEEEECCSSCSH-HHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESS-CGGGG-----GGG
T ss_pred hcccCCccceeeecccchhh-hhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccc-ccccc-----ccc
Confidence 45688999987765332222 2334444443 227999999999987664 467654443322 00111 122
Q ss_pred CCCccEEE-E--cccChH-------------------------HHHHHHHHhccCCceEEEE
Q 016363 271 DGGADYCF-E--CIGLTS-------------------------VMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 271 ~~g~D~vi-d--~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~ 304 (390)
.+.||.|+ | |+|... .+..+++.++++ |++|..
T Consensus 183 ~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYs 243 (313)
T d1ixka_ 183 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYS 243 (313)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEe
Confidence 33799997 5 666532 356777888887 876644
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.95 E-value=0.98 Score=36.66 Aligned_cols=97 Identities=15% Similarity=0.058 Sum_probs=60.8
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CCcE--EEcCCCCCCcCHHHHHHhhcC
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITD--FINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~~~--v~~~~~~~~~~~~~~i~~~~~ 271 (390)
....++.+||=+|+| .|..+..+++..+. +|++++.+++-++.+++. +... ++.. ++.+. ....
T Consensus 56 ~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~------d~~~~--~~~~ 125 (222)
T d2ex4a1 56 PNKTGTSCALDCGAG-IGRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC------GLQDF--TPEP 125 (222)
T ss_dssp --CCCCSEEEEETCT-TTHHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC------CGGGC--CCCS
T ss_pred cCCCCCCEEEEeccC-CCHhhHHHHHhcCC-EEEEeecCHHHhhccccccccccccccccccc------ccccc--cccc
Confidence 345677889999885 46666666665555 899999999988887653 2211 2221 22111 1122
Q ss_pred CCccEEEEcc-----cCh---HHHHHHHHHhccCCceEEEEc
Q 016363 272 GGADYCFECI-----GLT---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 272 ~g~D~vid~~-----g~~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+|+|+... ..+ ..+..+.+.|+++ |.++..-
T Consensus 126 ~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~ 166 (222)
T d2ex4a1 126 DSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKD 166 (222)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEE
Confidence 3799998632 222 2467788999998 9888664
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=83.94 E-value=0.43 Score=38.58 Aligned_cols=30 Identities=20% Similarity=0.163 Sum_probs=26.9
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
|+|+|+|+.|+.|+..|...|. +|..+++.
T Consensus 6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~ 35 (229)
T d3lada1 6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY 35 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence 7888999999999999999999 88888754
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.40 E-value=0.5 Score=38.20 Aligned_cols=30 Identities=30% Similarity=0.256 Sum_probs=27.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
|+|+|+|+.|+.++..|...|. +|.+++..
T Consensus 6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~ 35 (221)
T d3grsa1 6 YLVIGGGSGGLASARRAAELGA-RAAVVESH 35 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 7888999999999999999999 88888754
|
| >d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thermotoga maritima [TaxId: 2336]
Probab=83.30 E-value=4.2 Score=34.31 Aligned_cols=47 Identities=17% Similarity=0.188 Sum_probs=34.6
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEec--CChhhHHHHHhcCCcEEE
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDFI 252 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~~g~~~v~ 252 (390)
|+...+|..|.+++..++.+|.+-++.+. .++.|.+.++.+|++.++
T Consensus 58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~ 106 (293)
T d1o58a_ 58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVL 106 (293)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEEE
Confidence 44445699999999999999985344443 345688888999987654
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=83.24 E-value=0.46 Score=38.91 Aligned_cols=30 Identities=33% Similarity=0.392 Sum_probs=27.2
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
|+|+|+|+.|+.|+..|...|. +|..++..
T Consensus 6 viVIG~GpaGl~aA~~aa~~G~-kV~viE~~ 35 (235)
T d1h6va1 6 LIIIGGGSGGLAAAKEAAKFDK-KVMVLDFV 35 (235)
T ss_dssp EEEECCSHHHHHHHHHHGGGCC-CEEEECCC
T ss_pred EEEECCCHHHHHHHHHHHHCCC-eEEEEecc
Confidence 7899999999999999999999 89998843
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=83.15 E-value=2.3 Score=37.62 Aligned_cols=90 Identities=17% Similarity=0.188 Sum_probs=61.9
Q ss_pred EcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---c-CCcE----------------EEcCCCCCCcCHHHHHHh
Q 016363 209 FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---F-GITD----------------FINPATCGDKTVSQVIKE 268 (390)
Q Consensus 209 ~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---~-g~~~----------------v~~~~~~~~~~~~~~i~~ 268 (390)
.+.++.|.-.+++|+..|+.+|++.+.+++-.+++++ + +... .++. .+.-..+.
T Consensus 51 D~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~-----~Da~~~~~- 124 (375)
T d2dula1 51 DALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINH-----DDANRLMA- 124 (375)
T ss_dssp ESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEE-----SCHHHHHH-
T ss_pred EcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeeh-----hhhhhhhH-
Confidence 3448889999999999998899999999999888864 1 2111 1111 12222222
Q ss_pred hcCCCccEE-EEcccChH-HHHHHHHHhccCCceEEEEc
Q 016363 269 MTDGGADYC-FECIGLTS-VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~g~D~v-id~~g~~~-~~~~~~~~l~~~~G~~v~~g 305 (390)
..+..||+| ||..|.+. -+..+++.++.+ |.+....
T Consensus 125 ~~~~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTa 162 (375)
T d2dula1 125 ERHRYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTA 162 (375)
T ss_dssp HSTTCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred hhcCcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEe
Confidence 223379988 69999854 367899999987 8877665
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=82.88 E-value=1.6 Score=33.93 Aligned_cols=75 Identities=16% Similarity=0.231 Sum_probs=45.7
Q ss_pred CCCEEEEEcCChHHHHHH---HHHH--HcCCCeEEEecCChhhHHHH--------HhcCCcEEEcCCCCCCcCHHHHHHh
Q 016363 202 VGSTVAIFGLGAVGLAVA---EGAR--LNRASKIIGVDINPEKFEIG--------KKFGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai---~la~--~~g~~~Vi~~~~~~~~~~~~--------~~~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
|+-+|.|+|+|.+|.... .+++ .+...+++.++.++++.+.. ..++...-+... .+..+.+
T Consensus 1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~----td~~eaL-- 74 (171)
T d1obba1 1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT----MNLDDVI-- 74 (171)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE----SCHHHHH--
T ss_pred CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe----CChhhcc--
Confidence 456899999999986532 2333 22224899999998876532 224433222211 2344444
Q ss_pred hcCCCccEEEEcccChH
Q 016363 269 MTDGGADYCFECIGLTS 285 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~ 285 (390)
.++|+|+.+++...
T Consensus 75 ---~dad~Vv~~~~~g~ 88 (171)
T d1obba1 75 ---IDADFVINTAMVGG 88 (171)
T ss_dssp ---TTCSEEEECCCTTH
T ss_pred ---cCCCeEeeeccccc
Confidence 27999999888654
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=82.42 E-value=1.6 Score=33.10 Aligned_cols=91 Identities=15% Similarity=0.144 Sum_probs=48.2
Q ss_pred EEEEEcC-ChHHHHHHHH-HHHc--CCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 205 TVAIFGL-GAVGLAVAEG-ARLN--RASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~l-a~~~--g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
+|.|+|| |.+|+-.+++ +.+. -..++++..++..........+.. .+... .+.. .+ .++|++|-
T Consensus 3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~-----~~~~-~~-----~~~DivF~ 71 (146)
T d1t4ba1 3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDA-----FDLE-AL-----KALDIIVT 71 (146)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEET-----TCHH-HH-----HTCSEEEE
T ss_pred EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecc-----cchh-hh-----hcCcEEEE
Confidence 6899999 9999999974 4432 333677666553322111111111 11111 1111 11 17999999
Q ss_pred cccChHHHHHHHHHhccCC-ceEEEEcc
Q 016363 280 CIGLTSVMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
|++...+.+..-.....+. ..+++.+.
T Consensus 72 a~~~~~s~~~~~~~~~~g~~~~VID~Ss 99 (146)
T d1t4ba1 72 CQGGDYTNEIYPKLRESGWQGYWIDAAS 99 (146)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred ecCchHHHHhhHHHHhcCCCeecccCCc
Confidence 9998874444444444331 23666653
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.27 E-value=1.3 Score=36.08 Aligned_cols=106 Identities=14% Similarity=0.162 Sum_probs=66.6
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~ 267 (390)
|....+....++||-+|.+ .|..++.+|+.+ +. +|+.++.+++..+.+++ .|....+.... .+..+.+.
T Consensus 51 L~~L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~---Gda~e~l~ 125 (219)
T d2avda1 51 LANLARLIQAKKALDLGTF-TGYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLD 125 (219)
T ss_dssp HHHHHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHH
T ss_pred HHHHHHccCCCeEEEEech-hhHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEEEE---eehhhcch
Confidence 3345566677899999873 466677777765 34 99999999998776654 35332221111 23444444
Q ss_pred hh----cCCCccEEE-EcccChH--HHHHHHHHhccCCceEEEEc
Q 016363 268 EM----TDGGADYCF-ECIGLTS--VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~----~~~g~D~vi-d~~g~~~--~~~~~~~~l~~~~G~~v~~g 305 (390)
++ ..+.+|.|| |.--... .++.+++.|+++ |.++.-.
T Consensus 126 ~~~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn 169 (219)
T d2avda1 126 ELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR 169 (219)
T ss_dssp HHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred hhhhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeC
Confidence 33 233799998 4333322 367899999998 8887544
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=82.22 E-value=0.53 Score=40.71 Aligned_cols=32 Identities=31% Similarity=0.487 Sum_probs=28.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
-|||+|+|..|+.++.-|...|+ +|+++++.+
T Consensus 21 DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~~ 52 (317)
T d1qo8a2 21 QVLVVGAGSAGFNASLAAKKAGA-NVILVDKAP 52 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 48999999999999999999999 899998653
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=82.09 E-value=0.36 Score=37.89 Aligned_cols=82 Identities=21% Similarity=0.235 Sum_probs=51.5
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|.|+|+|.+|...+..++.. ++ +++++.....+. .....+..+.+ +. .+ ...+|+|+.|++.
T Consensus 5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~-----~~~~~~~~~~~-----~~----~~-~~~~D~Vvi~tp~ 68 (170)
T d1f06a1 5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATL-----DTKTPVFDVAD-----VD----KH-ADDVDVLFLCMGS 68 (170)
T ss_dssp EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCC-----SSSSCEEEGGG-----GG----GT-TTTCSEEEECSCT
T ss_pred eEEEECChHHHHHHHHHHHhCCCc-EEEEEEeccccc-----ccccccccchh-----hh----hh-ccccceEEEeCCC
Confidence 589999999999888877755 56 666655333221 11112222111 11 11 1269999999998
Q ss_pred hHHHHHHHHHhccCCceEEE
Q 016363 284 TSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 284 ~~~~~~~~~~l~~~~G~~v~ 303 (390)
....+.+.++|..+ -.++.
T Consensus 69 ~~h~~~a~~aL~aG-~~vv~ 87 (170)
T d1f06a1 69 ATDIPEQAPKFAQF-ACTVD 87 (170)
T ss_dssp TTHHHHHHHHHTTT-SEEEC
T ss_pred cccHHHHHHHHHCC-CcEEE
Confidence 87688889999876 45553
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=82.07 E-value=0.66 Score=37.80 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=27.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHc--CCCeEEEecCChh
Q 016363 204 STVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPE 238 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~ 238 (390)
.+|+|+|+|+.|+.|+..++.. |. +|++.++.+.
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLV 37 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence 3799999999999999866543 67 8998887653
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=81.93 E-value=0.79 Score=35.17 Aligned_cols=138 Identities=14% Similarity=0.015 Sum_probs=73.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCC--CeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRA--SKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~--~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
|=+|.|+|| |-+|.-.++++..... .++..++++...-..+........ .+..+ .+ ....|+++
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~---~~---------~~~~d~~f 68 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE---TA---------FEGVDIAL 68 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCT---TT---------TTTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccch---hh---------hhhhhhhh
Confidence 347999999 9999999999987742 255555533221111111111111 11111 11 12689999
Q ss_pred EcccChHHHHHHHHHhccCCceEEEEcccCCCC-CcccchHhhh-----cceeEEeeecCCCCchhhHHHHHHHHHcCCC
Q 016363 279 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEIL-----KGRSVCGTYFGGLKPRSDIATLAQKYLDKEL 352 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~-----~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 352 (390)
-+.+...+.+...+.+..+ -++++.+...... ..++...++. +..+++.. -+. +...+.-+.-+++++.+
T Consensus 69 ~~~~~~~s~~~~~~~~~~~-~~VIDlSsdfR~~~~~~~~~pe~n~~~~~~~~~iIAn-PgC--~tt~i~~l~PL~~~~li 144 (154)
T d2gz1a1 69 FSAGSSTSAKYAPYAVKAG-VVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIAC-PNA--AWNSVQIAETLHERGLV 144 (154)
T ss_dssp ECSCHHHHHHHHHHHHHTT-CEEEECSSTTTTCTTSCBCCHHHHGGGGGGCCSEEEC-CCT--HHHHHHHHHHHHHTTCC
T ss_pred hccCccchhhHHhhhcccc-ceehhcChhhhccCCcccccchhhHHHhcCcCceEEC-CCC--HHHHHHHHHHHHHhcCC
Confidence 9999887677777777777 8888887543211 2222222222 22223322 111 22234446677888877
Q ss_pred CCcc
Q 016363 353 NLGE 356 (390)
Q Consensus 353 ~~~~ 356 (390)
++..
T Consensus 145 k~~~ 148 (154)
T d2gz1a1 145 RPTA 148 (154)
T ss_dssp SCCS
T ss_pred Cccc
Confidence 6553
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=81.87 E-value=2.4 Score=36.18 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC---------Cc-EEEcCCCCCCcCHHHHHHhhc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---------IT-DFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g---------~~-~v~~~~~~~~~~~~~~i~~~~ 270 (390)
....+|||+|+|. |..+-.+++..+..+|.+++.+++=.+.++++- .. .++. .|..+.+++ +
T Consensus 88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~-~ 159 (295)
T d1inla_ 88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRK-F 159 (295)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGG-C
T ss_pred CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh------hhHHHHHhc-C
Confidence 4457999998743 334556667666658999999998887776632 11 2222 234444543 3
Q ss_pred CCCccEEE-EcccC----------hHHHHHHHHHhccCCceEEEEc
Q 016363 271 DGGADYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 271 ~~g~D~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
++.+|+|| |+... ..-.+.+.+.|+++ |.++.-.
T Consensus 160 ~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~ 204 (295)
T d1inla_ 160 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET 204 (295)
T ss_dssp SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEec
Confidence 44899997 54331 12366788999999 9887654
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=81.86 E-value=3.5 Score=31.05 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=43.9
Q ss_pred CCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHHhhcC
Q 016363 201 EVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 201 ~~g~~VlI~Ga--g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
-.|.+||=+++ |.+|..| ...|+++|+.++.+++-.+.+++ ++.. .++. .+..+.+.. ..
T Consensus 13 ~~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~------~D~~~~l~~-~~ 81 (152)
T d2esra1 13 FNGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK------MEAERAIDC-LT 81 (152)
T ss_dssp CCSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC------SCHHHHHHH-BC
T ss_pred CCCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhc------ccccccccc-cc
Confidence 36788877754 6666643 34688899999999888776643 4543 2332 245555543 34
Q ss_pred CCccEEEE
Q 016363 272 GGADYCFE 279 (390)
Q Consensus 272 ~g~D~vid 279 (390)
+.+|+||-
T Consensus 82 ~~fDiIf~ 89 (152)
T d2esra1 82 GRFDLVFL 89 (152)
T ss_dssp SCEEEEEE
T ss_pred cccceeEe
Confidence 48999983
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=81.76 E-value=0.7 Score=40.20 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=26.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCCh
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINP 237 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~ 237 (390)
.+|+|+|||+.|++++..++..|. .+|++..+++
T Consensus 5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~ 39 (335)
T d2gv8a1 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG 39 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 579999999999998876655542 2899999774
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=81.55 E-value=0.68 Score=39.45 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=26.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.|+|+|+|.+|++++.-+...|.++|.+++++
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 59999999999988877777886479898865
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=81.31 E-value=0.68 Score=38.91 Aligned_cols=30 Identities=27% Similarity=0.338 Sum_probs=27.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
|+|+|+|.+|+.++.-+...|. +|+++++.
T Consensus 6 vvIIGaGi~Gls~A~~La~~G~-~V~viE~~ 35 (281)
T d2gf3a1 6 VIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF 35 (281)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence 8999999999999888888999 89999864
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=81.17 E-value=5 Score=34.33 Aligned_cols=97 Identities=19% Similarity=0.161 Sum_probs=62.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC---------c-EEEcCCCCCCcCHHHHHHhh
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI---------T-DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~---------~-~v~~~~~~~~~~~~~~i~~~ 269 (390)
....++|||+|+|. |..+-.+++.....+|.++...++=.+.++++-. . .++. .|..+.+++
T Consensus 104 ~~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i------~Da~~~l~~- 175 (312)
T d2b2ca1 104 HPDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC------GDGFEFLKN- 175 (312)
T ss_dssp SSSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC------SCHHHHHHH-
T ss_pred CCCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEE------chHHHHHHh-
Confidence 34567899998753 3334466676666699999999998888877421 1 1221 244555654
Q ss_pred cCCCccEEE-EcccC---------hHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+.+|+|| |.... ..-.+.+.++|+++ |.++.-+
T Consensus 176 ~~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~ 220 (312)
T d2b2ca1 176 HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG 220 (312)
T ss_dssp CTTCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred CCCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEec
Confidence 445899998 43321 11255677899998 9988765
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=81.13 E-value=1.1 Score=32.44 Aligned_cols=35 Identities=9% Similarity=-0.070 Sum_probs=27.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHc---CCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLN---RASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~---g~~~Vi~~~~~~ 237 (390)
..++++|+|+|.+|.-+++++..+ |. +|..+.+++
T Consensus 17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~ 54 (117)
T d1feca2 17 APKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD 54 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred cCCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence 357999999999999888876544 66 888887653
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=81.08 E-value=7.2 Score=30.37 Aligned_cols=103 Identities=17% Similarity=0.302 Sum_probs=63.4
Q ss_pred HHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc--EEEcCCCCCCcCHHHHHHhhcCC
Q 016363 196 KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
....+++|.+ +|.+. |.=|+.... +.. +. +||++++.++.+..++..-.+ .++...- .++.+.+..+.-+
T Consensus 12 ~~l~~~~g~~-~vD~T~G~GGhs~~i-L~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f---~~~~~~l~~~~~~ 84 (182)
T d1wg8a2 12 DLLAVRPGGV-YVDATLGGAGHARGI-LER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNF---RHLKRHLAALGVE 84 (182)
T ss_dssp HHHTCCTTCE-EEETTCTTSHHHHHH-HHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCG---GGHHHHHHHTTCS
T ss_pred HhcCCCCCCE-EEEeCCCCcHHHHHH-hcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHH---HHHHHHHHHcCCC
Confidence 4567888886 46655 666665444 333 55 999999999988888764322 2333222 3555555554434
Q ss_pred CccEEEEcccChH---------------HHHHHHHHhccCCceEEEEcc
Q 016363 273 GADYCFECIGLTS---------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 273 g~D~vid~~g~~~---------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
.+|.|+==.|-.. .+....+.++++ |+++.+..
T Consensus 85 ~vdgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~f 132 (182)
T d1wg8a2 85 RVDGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAF 132 (182)
T ss_dssp CEEEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred ccCEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEec
Confidence 7888863233322 256667778887 87776653
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=81.06 E-value=2 Score=35.26 Aligned_cols=95 Identities=7% Similarity=-0.025 Sum_probs=57.1
Q ss_pred CEEEEEcCCh----HHHHHHHHHHHc--CCCeEEE-ecCChhhHHH-HHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 204 STVAIFGLGA----VGLAVAEGARLN--RASKIIG-VDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 204 ~~VlI~Gag~----vG~~ai~la~~~--g~~~Vi~-~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
=+|.|+|+|. ++...+...+.. ++ ++++ .++++++.+. +++++....-.++ ++.+.+. ...+|
T Consensus 17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~-~ivav~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~---~~~iD 87 (237)
T d2nvwa1 17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQF-QIVALYNPTLKSSLQTIEQLQLKHATGFD-----SLESFAQ---YKDID 87 (237)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTE-EEEEEECSCHHHHHHHHHHTTCTTCEEES-----CHHHHHH---CTTCS
T ss_pred eEEEEEecCccccHHHHHHHHHHHhcCCCe-EEEEEEcCCHHHHHHHHHhcccccceeec-----chhhccc---ccccc
Confidence 4689999865 444445445543 46 7775 4566666544 4567654322222 3444332 23799
Q ss_pred EEEEcccChHHHHHHHHHhccCC----ceEEEEccc
Q 016363 276 YCFECIGLTSVMNDAFNSSREGW----GKTVILGVE 307 (390)
Q Consensus 276 ~vid~~g~~~~~~~~~~~l~~~~----G~~v~~g~~ 307 (390)
+|+.|+......+.+..+|..+. ++-+++.-+
T Consensus 88 ~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKP 123 (237)
T d2nvwa1 88 MIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 123 (237)
T ss_dssp EEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred eeeccCCCcchhhHHHHHHHhcccccCCceEEEecc
Confidence 99999998876777777776530 345666643
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=80.86 E-value=0.62 Score=40.35 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=27.9
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
|||+|+|..|+.|+.-|...|+ +|+++...+
T Consensus 8 VvVIG~G~AGl~AAl~aa~~G~-~V~liEK~~ 38 (336)
T d2bs2a2 8 SLVIGGGLAGLRAAVATQQKGL-STIVLSLIP 38 (336)
T ss_dssp EEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence 8999999999999999999999 899998654
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=80.77 E-value=0.64 Score=40.15 Aligned_cols=32 Identities=44% Similarity=0.576 Sum_probs=28.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
-|+|+|+|..|+.++.-|...|+ +|+++.+.+
T Consensus 25 DVvVIG~G~aGl~aA~~la~~G~-~V~llEk~~ 56 (322)
T d1d4ca2 25 DVVIIGSGGAGLAAAVSARDAGA-KVILLEKEP 56 (322)
T ss_dssp SEEEECSSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred eEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 38999999999999999989999 899998654
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=80.75 E-value=1.3 Score=35.19 Aligned_cols=90 Identities=18% Similarity=0.223 Sum_probs=57.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.+.++++||=+|+| .|..+..+ . ++++++.+++-.+.+++-+...+....+ ++ ...++.+|+|+
T Consensus 33 ~~~~~~~vLDiGcG-~G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~~~~d~~----~l-----~~~~~~fD~I~ 96 (208)
T d1vlma_ 33 CLLPEGRGVEIGVG-TGRFAVPL-----K-IKIGVEPSERMAEIARKRGVFVLKGTAE----NL-----PLKDESFDFAL 96 (208)
T ss_dssp HHCCSSCEEEETCT-TSTTHHHH-----T-CCEEEESCHHHHHHHHHTTCEEEECBTT----BC-----CSCTTCEEEEE
T ss_pred hhCCCCeEEEECCC-Cccccccc-----c-eEEEEeCChhhccccccccccccccccc----cc-----ccccccccccc
Confidence 34567789999985 24433333 2 6789999999999998866543332111 11 11223799998
Q ss_pred Eccc-----ChH-HHHHHHHHhccCCceEEEEc
Q 016363 279 ECIG-----LTS-VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 279 d~~g-----~~~-~~~~~~~~l~~~~G~~v~~g 305 (390)
..-. ... .++.+.+.|+++ |+++...
T Consensus 97 ~~~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~ 128 (208)
T d1vlma_ 97 MVTTICFVDDPERALKEAYRILKKG-GYLIVGI 128 (208)
T ss_dssp EESCGGGSSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cccccccccccccchhhhhhcCCCC-ceEEEEe
Confidence 6432 222 467889999999 9887664
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=80.62 E-value=4.8 Score=33.04 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=60.0
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHH----hcCC-cEE-EcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGK----KFGI-TDF-INPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~----~~g~-~~v-~~~~~~~~~~~~~~i 266 (390)
+.....+....+||=+|+| .|..++.+++.. +. ++++++. ++-.+.++ +.+. +.+ +... ++.
T Consensus 72 ~~~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~-----D~~--- 140 (253)
T d1tw3a2 72 PAAAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHV-SATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG-----DFF--- 140 (253)
T ss_dssp HHHHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTC-EEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC-----CTT---
T ss_pred HHhhcCCccCCEEEEeCCC-CCHHHHHHHHhccee-EEEEccC-HHHHHHHHHHHHHhhcccchhhccc-----cch---
Confidence 3456677888899988875 567778888876 45 8888885 44444443 2332 111 1111 111
Q ss_pred HhhcCCCccEEEEccc-----Ch---HHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIG-----LT---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
+..+.++|+|+-..- .+ ..++.+.+.|+++ |+++.+-
T Consensus 141 -~~~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e 185 (253)
T d1tw3a2 141 -EPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHE 185 (253)
T ss_dssp -SCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred -hhcccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEe
Confidence 112237999974321 12 2367788999999 9998765
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.04 E-value=0.53 Score=38.42 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=27.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcC-------CCeEEEecCCh
Q 016363 204 STVAIFGLGAVGLAVAEGARLNR-------ASKIIGVDINP 237 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g-------~~~Vi~~~~~~ 237 (390)
-+|+|+|+|+.|++|+..+...| + +|.+.++.+
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~-~V~v~E~~~ 42 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDM-AVDMLEMLP 42 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCE-EEEEEESSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCC-ceEEEecCC
Confidence 37999999999999998887766 4 688887654
|