Citrus Sinensis ID: 016409
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 390 | ||||||
| 255570858 | 405 | conserved hypothetical protein [Ricinus | 0.966 | 0.930 | 0.771 | 1e-178 | |
| 225434550 | 392 | PREDICTED: uncharacterized protein LOC10 | 0.974 | 0.969 | 0.767 | 1e-177 | |
| 224105945 | 394 | predicted protein [Populus trichocarpa] | 0.982 | 0.972 | 0.766 | 1e-176 | |
| 449455019 | 390 | PREDICTED: uncharacterized protein LOC10 | 0.969 | 0.969 | 0.729 | 1e-173 | |
| 356566070 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.938 | 0.943 | 0.718 | 1e-167 | |
| 356541751 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.935 | 0.940 | 0.720 | 1e-166 | |
| 224055329 | 339 | predicted protein [Populus trichocarpa] | 0.866 | 0.997 | 0.779 | 1e-166 | |
| 356553086 | 359 | PREDICTED: uncharacterized protein LOC10 | 0.905 | 0.983 | 0.748 | 1e-165 | |
| 449526756 | 345 | PREDICTED: uncharacterized LOC101217703 | 0.879 | 0.994 | 0.762 | 1e-164 | |
| 357490845 | 401 | hypothetical protein MTR_5g071350 [Medic | 0.892 | 0.867 | 0.707 | 1e-153 |
| >gi|255570858|ref|XP_002526381.1| conserved hypothetical protein [Ricinus communis] gi|223534292|gb|EEF36005.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/380 (77%), Positives = 330/380 (86%), Gaps = 3/380 (0%)
Query: 13 LTILCLVLV-KPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPM 71
L I CLVL+ + +SA+IM +RNHH HN +RRPMLQANQSTCALFVGTWV+DDTYP+
Sbjct: 27 LAIFCLVLLLETQIATSALIMSMRNHHKKHN-NRRPMLQANQSTCALFVGTWVKDDTYPL 85
Query: 72 YQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDS 131
YQS CP+ID +FNCQM GRPDSDYLKYRWQPLNC+LPRFNG+EFL+KMKGKTVMFVGDS
Sbjct: 86 YQSSHCPVIDPQFNCQMYGRPDSDYLKYRWQPLNCELPRFNGVEFLLKMKGKTVMFVGDS 145
Query: 132 LGLNQWESLICMIHAAAPRT-RTHMTRGDPLSTFKFLDYGISVSFYRAPYLVDIDVVHGK 190
LG NQWESLIC+I A P T T M+RGDP S FKFLDYG+S+++Y+APYLVDIDVV GK
Sbjct: 146 LGRNQWESLICLILATVPSTAATQMSRGDPFSIFKFLDYGVSIAYYKAPYLVDIDVVQGK 205
Query: 191 RVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKG 250
R+LKLEDISGN +W +ADVL FNTGHWW+H+GSLQGWDYMES GTYYQDMDRLVALEK
Sbjct: 206 RILKLEDISGNANAWRHADVLLFNTGHWWNHQGSLQGWDYMESGGTYYQDMDRLVALEKA 265
Query: 251 LRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPG 310
LRTWANW+D+NID S T +FFQSISPTHY+P+EWSAG+ +T +NCYGET PMSGT PG
Sbjct: 266 LRTWANWIDSNIDTSATTLFFQSISPTHYDPNEWSAGAAVTTTRNCYGETTPMSGTMNPG 325
Query: 311 AYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSH 370
AYPDQMRVVD VIR M +P YLLDITMLSELRKD HPSIYSGDL+ Q+ANP RSADCSH
Sbjct: 326 AYPDQMRVVDNVIRHMQTPTYLLDITMLSELRKDCHPSIYSGDLSADQRANPGRSADCSH 385
Query: 371 WCLPGLPDTWNQLLYTALFY 390
WCLPGLPDTWNQL YTALF+
Sbjct: 386 WCLPGLPDTWNQLFYTALFF 405
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434550|ref|XP_002277229.1| PREDICTED: uncharacterized protein LOC100263882 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224105945|ref|XP_002313988.1| predicted protein [Populus trichocarpa] gi|222850396|gb|EEE87943.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449455019|ref|XP_004145251.1| PREDICTED: uncharacterized protein LOC101208082 [Cucumis sativus] gi|449470704|ref|XP_004153056.1| PREDICTED: uncharacterized protein LOC101217703 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356566070|ref|XP_003551258.1| PREDICTED: uncharacterized protein LOC100818177 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356541751|ref|XP_003539337.1| PREDICTED: uncharacterized protein LOC100813612 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224055329|ref|XP_002298483.1| predicted protein [Populus trichocarpa] gi|222845741|gb|EEE83288.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356553086|ref|XP_003544889.1| PREDICTED: uncharacterized protein LOC100795193 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449526756|ref|XP_004170379.1| PREDICTED: uncharacterized LOC101217703 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357490845|ref|XP_003615710.1| hypothetical protein MTR_5g071350 [Medicago truncatula] gi|355517045|gb|AES98668.1| hypothetical protein MTR_5g071350 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 390 | ||||||
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.984 | 0.955 | 0.629 | 1.7e-139 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.869 | 0.851 | 0.648 | 5.3e-127 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.951 | 0.976 | 0.489 | 1.5e-97 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.941 | 0.953 | 0.489 | 4.8e-94 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.815 | 0.873 | 0.492 | 4.5e-91 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.835 | 0.915 | 0.497 | 8.3e-90 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.817 | 0.869 | 0.497 | 1.1e-89 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.820 | 0.891 | 0.479 | 2.6e-86 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.838 | 0.537 | 0.407 | 7.1e-77 | |
| TAIR|locus:2155874 | 457 | TBL4 "AT5G49340" [Arabidopsis | 0.841 | 0.717 | 0.415 | 5e-76 |
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1365 (485.6 bits), Expect = 1.7e-139, P = 1.7e-139
Identities = 251/399 (62%), Positives = 313/399 (78%)
Query: 6 LKLLG-SFLT-ILCLVLVKPHTVSSAVIMGLXXXXXXXX-------XXXXPM--LQANQS 54
L LLG S ++ I LVL +P SSA+I+ L P Q N+S
Sbjct: 5 LPLLGISVVSAIFFLVLQQPEQSSSAIILSLKKRHGSSSGSSGNQYSSSRPSAGFQGNRS 64
Query: 55 TCALFVGTWVRDDTYPMYQSPECP-IIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNG 113
TC+LF+GTWVRD++YP+Y+ +CP +++ EF+CQM GRPDSDYLKYRWQP NC LP FNG
Sbjct: 65 TCSLFLGTWVRDNSYPLYKPADCPGVVEPEFDCQMYGRPDSDYLKYRWQPQNCNLPTFNG 124
Query: 114 LEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISV 173
+FL+KMKGKT+MF GDSLG NQWESLIC+I ++AP TRT MTRG PLSTF+FLDYGI++
Sbjct: 125 AQFLLKMKGKTIMFAGDSLGKNQWESLICLIVSSAPSTRTEMTRGLPLSTFRFLDYGITM 184
Query: 174 SFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMES 233
SFY+AP+LVDID V GKRVLKL++ISGN +W +AD+L FNTGHWWSH GS+QGWD ++S
Sbjct: 185 SFYKAPFLVDIDAVQGKRVLKLDEISGNANAWHDADLLIFNTGHWWSHTGSMQGWDLIQS 244
Query: 234 MGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTA 293
+YYQDMDR VA+EK LRTWA WV+ ++DRS+T+V F SISPTH NPS+W+A S+SS +
Sbjct: 245 GNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTHDNPSDWAA-SSSSGS 303
Query: 294 KNCYGETAPMSGTTYP-GAYPDQMR-VVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYS 351
KNCYGET P++GT YP +Y DQ+R V+ V+ MH+PA+LLDIT+LS LRKDGHPS+YS
Sbjct: 304 KNCYGETEPITGTAYPVSSYTDQLRSVIVEVLHGMHNPAFLLDITLLSSLRKDGHPSVYS 363
Query: 352 GDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 390
G ++ Q++ PD+SADCSHWCLPGLPDTWNQLLYT L Y
Sbjct: 364 GLISGSQRSRPDQSADCSHWCLPGLPDTWNQLLYTLLIY 402
|
|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 390 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 0.0 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-110 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 1e-24 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 732 bits (1891), Expect = 0.0
Identities = 308/387 (79%), Positives = 345/387 (89%), Gaps = 3/387 (0%)
Query: 5 FLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWV 64
L L F + LVL++P SSA+I+ L+NHHN+H +RRP LQANQSTCALFVGTWV
Sbjct: 3 CLLLGSCFSFLFFLVLLQPEIASSALILSLKNHHNHH-SNRRPSLQANQSTCALFVGTWV 61
Query: 65 RDDTYPMYQSPECP-IIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGK 123
RDD+YP+YQS +CP +ID EFNCQM GRPDSDYLKYRWQPLNC+LPRFNGLEFL+KMKGK
Sbjct: 62 RDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGK 121
Query: 124 TVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDYGISVSFYRAPYLVD 183
TVMFVGDSLG NQWESLIC+I ++ P TRT M+RGDPLSTFKFLDYG+S+SFY+APYLVD
Sbjct: 122 TVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVD 181
Query: 184 IDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDR 243
ID V GKRVLKLE+ISGN +W +ADVL FNTGHWWSH+GSLQGWDY+ES GTYYQDMDR
Sbjct: 182 IDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDR 241
Query: 244 LVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPM 303
LVALEK LRTWA WVD N+DRS+TRVFFQSISPTHYNPSEWSAG++++T KNCYGET PM
Sbjct: 242 LVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGASTTT-KNCYGETTPM 300
Query: 304 SGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPD 363
SG TYPGAYPDQMRVVD VIR MH+PAYLLDIT+LSELRKDGHPSIYSGDL+P Q+ANPD
Sbjct: 301 SGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPD 360
Query: 364 RSADCSHWCLPGLPDTWNQLLYTALFY 390
RSADCSHWCLPGLPDTWNQL YTALF+
Sbjct: 361 RSADCSHWCLPGLPDTWNQLFYTALFF 387
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 390 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.55 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 95.2 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 94.58 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 94.58 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 88.75 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 85.44 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-123 Score=922.75 Aligned_cols=378 Identities=81% Similarity=1.434 Sum_probs=346.7
Q ss_pred HHHHHHHhhhcccccccceeeeeecCCCCCCCCCCCCcccCCCCCCCCccCceeeCCCCCCCCCCCCC-CCCCCcccccC
Q 016409 11 SFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECP-IIDSEFNCQMN 89 (390)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~n 89 (390)
.|-++..++|+++..+++++++++...+..|.. +.|.++.+.+.||+|+|+||+|+++|+|++++|| ||++++||++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~kn 87 (387)
T PLN02629 9 CFSFLFFLVLLQPEIASSALILSLKNHHNHHSN-RRPSLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMY 87 (387)
T ss_pred HHHHHHHHhhhccchhhhhhhhhhhcccccccC-CCCCCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhc
Confidence 344445778888988999999998887665444 6778889999999999999999999999999999 99999999999
Q ss_pred CCCCCcccccccccCCCCCCCCCHHHHHHHHcCCeEEEEeecchHHHHHHHHHhhhccCCCCceeeeeCCCceeEEEeec
Q 016409 90 GRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLDY 169 (390)
Q Consensus 90 GRpD~~yl~wrWqP~~C~Lprfd~~~fl~~lrgK~i~FVGDSl~Rnq~eSL~ClL~~~~~~~~~~~~~~~~~~~~~f~~~ 169 (390)
||||++|++|||||++|+||||||.+||++|||||||||||||+|||||||+|||++++|+.++.+.+.++..+|+|++|
T Consensus 88 GRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~y 167 (387)
T PLN02629 88 GRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDY 167 (387)
T ss_pred CCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccC
Confidence 99999999999999999999999999999999999999999999999999999999999876666667778899999999
Q ss_pred CeEEEEEecccceeeccccceeeEEEccCCccccCCcCccEEEEecccccccCCcccceeeeecCceEeecCCHHHHHHH
Q 016409 170 GISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEK 249 (390)
Q Consensus 170 n~tv~f~wspfLv~~~~~~~~~~l~lD~id~~~~~w~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~ 249 (390)
|+||+||||||||+.+...+.+.|++|++++.++.|+++|||||||||||.+.+.++++++++.|+.++++|++.+||++
T Consensus 168 N~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~ 247 (387)
T PLN02629 168 GVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEK 247 (387)
T ss_pred CEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHH
Confidence 99999999999999888777789999999988889999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCchHHHHHHHHHHhcCCC
Q 016409 250 GLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSP 329 (390)
Q Consensus 250 al~t~~~wv~~~~~~~~~~VffRt~SP~Hf~~g~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~ 329 (390)
||+||++||++++++.+++|||||+||+||+||+||+|.++ .+|+|+++|+|+.++++.+....+++++++++++++.+
T Consensus 248 al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg~~-~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~ 326 (387)
T PLN02629 248 ALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAST-TTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNP 326 (387)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCCCC-CCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCc
Confidence 99999999999999899999999999999999999984332 25789999999998887766667788999999999999
Q ss_pred eeEeecccccccccCCCCCCcCCCCCccccCCCCCCCCcccccCCCchhHHHHHHHHHhhC
Q 016409 330 AYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 390 (390)
Q Consensus 330 v~lLDIt~ls~~R~DgHps~y~~~~~~~~~~~~~~~~DC~HWClPGv~DtWNelL~~~L~~ 390 (390)
|++||||+||++|||||||+|+++++++++++|..++||+||||||||||||||||++|++
T Consensus 327 v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 327 AYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred eEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHhC
Confidence 9999999999999999999998777777888888889999999999999999999999975
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 390 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 3e-09
Identities = 59/437 (13%), Positives = 127/437 (29%), Gaps = 141/437 (32%)
Query: 36 NHHNNH--------NHHRRPMLQANQSTCALFVGTW----VRDDTYPMYQSPECPIIDSE 83
+HH++H + + +L + FV + V+D + E I
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFEDA---FVDNFDCKDVQDMPKSILSKEEIDHIIMS 57
Query: 84 FNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTV--MFVGDSLGLN-QWESL 140
D+ R L + + K + + FV + L +N ++ L
Sbjct: 58 --------KDAVSGTLR-------------LFWTLLSKQEEMVQKFVEEVLRINYKF--L 94
Query: 141 ICMIH----AAAPRTRTHMTRGDPL--STFKFLDYGIS------------VSFYRAPYLV 182
+ I + TR ++ + D L F Y +S + A ++
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 183 DIDVVHGKRVLKLEDISGNGKSWLNADVLS-------FNTGHWWSHEGSLQGWD-YMESM 234
+ G G+GK+W+ DV + +W + + + +E +
Sbjct: 155 ----IDGV--------LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202
Query: 235 GTYYQDMD---------------RLVALEKGLRT-----------------WANWVDNNI 262
+D R+ +++ LR N
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF 262
Query: 263 D-RSKTRV---------FFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAY 312
+ K + F + + TH + S T K+ + P
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR----PQDL 318
Query: 313 PDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWC 372
P ++ +P +++++E +D + + + + N D+
Sbjct: 319 PREVLTT--------NP---RRLSIIAESIRD-GLATW----DNWKHVNCDKLTTIIESS 362
Query: 373 LPGLPDTWNQLLYTALF 389
L L + ++ L
Sbjct: 363 LNVLEPAEYRKMFDRLS 379
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 390 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.86 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0009 Score=59.11 Aligned_cols=92 Identities=11% Similarity=0.100 Sum_probs=56.9
Q ss_pred cCccEEEEecccccccCCcccceeeeecCceEeecCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCCCCCCCCC
Q 016409 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS 285 (390)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~~~~VffRt~SP~Hf~~g~W~ 285 (390)
..+|+||++.|..=.. ...+.|++.|+++++-+.+. .++++++|.+..|..... +.
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~--~~ 128 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGE--GM 128 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESG--GG
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcccc--cc
Confidence 4589999999865211 12467888899988877653 256789999998865421 00
Q ss_pred CCCCCCCCCCCCCCcccCCCCCCCCCCchHHHHHHHHHHhcCCCeeEeecccccc
Q 016409 286 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSE 340 (390)
Q Consensus 286 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLDIt~ls~ 340 (390)
. .. ..........+++++++.++ .++.++|+...+.
T Consensus 129 ~---------~~--------~~~~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~ 164 (200)
T 4h08_A 129 K---------EF--------APITERLNVRNQIALKHINR--ASIEVNDLWKVVI 164 (200)
T ss_dssp C---------EE--------CTHHHHHHHHHHHHHHHHHH--TTCEEECHHHHHT
T ss_pred c---------cc--------chhHHHHHHHHHHHHHHhhh--cceEEEecHHhHh
Confidence 0 00 00000012346677777766 5799999876653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 390 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.93 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.58 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 83.56 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.93 E-value=0.00082 Score=56.71 Aligned_cols=106 Identities=10% Similarity=-0.032 Sum_probs=51.3
Q ss_pred cCccEEEEecccccccCCcccceeeeecCceEeecCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCCCCCCCCC
Q 016409 206 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS 285 (390)
Q Consensus 206 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~~~~VffRt~SP~Hf~~g~W~ 285 (390)
..+|+||+..|.-=..... +...+. . .....|+.+++.+++.+.+.. +++++++-+.-|.....
T Consensus 64 ~~~d~Vii~~G~ND~~~~~--~~~~~~-------~-~~~~~~~~~~~~~i~~i~~~~--~~~~ii~~~~~~~~~~~---- 127 (207)
T d3dc7a1 64 EDADFIAVFGGVNDYGRDQ--PLGQYG-------D-CDMTTFYGALMMLLTGLQTNW--PTVPKLFISAIHIGSDF---- 127 (207)
T ss_dssp TTCSEEEEECCHHHHHTTC--CCCCTT-------C-CSTTSHHHHHHHHHHHHHHHC--TTSCEEEEECCCCCSCS----
T ss_pred CCCCEEEEccCchhhhccc--Cccccc-------c-ccHHHHHHHHHHHHHHHHHhC--CceEEEEecCCCCcccc----
Confidence 3589999998854211100 000000 0 112345566666666665532 45677777665544321
Q ss_pred CCCCCCCCCCCCCCcccCCCCCCCCCCchHHHHHHHHHHhcCCCeeEeeccccccc
Q 016409 286 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSEL 341 (390)
Q Consensus 286 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLDIt~ls~~ 341 (390)
+... +.....+.......++.++++.++ ..+.++|+...+..
T Consensus 128 -------~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~id~~~~~~~ 169 (207)
T d3dc7a1 128 -------GGSF-----SAVTNGLGYRQSDYEAAIAQMTAD--YGVPHLSLYRDAGM 169 (207)
T ss_dssp -------BTTB-----CSSCCTTSCCHHHHHHHHHHHHHH--HTCCEEEHHHHSSC
T ss_pred -------ccch-----hhhhhhHHHHHHHHHHHHHHHHHh--ceeeeeehhhhhhc
Confidence 1111 111111111112345666766666 47889998765543
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|